Metagenome / Metatranscriptome Family F066762

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066762
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	93 residues
Representative Sequence	VTRLHARHANVVLLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Number of Associated Samples	110
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.33 %
% of genes near scaffold ends (potentially truncated)	22.22 %
% of genes from short scaffolds (< 2000 bps)	81.75 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (73.016 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.460 % of family members)
Environment Ontology (ENVO)	Unclassified (32.540 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.85% β-sheet: 0.00% Coil/Unstructured: 49.15%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00067	p450	15.08
PF12706	Lactamase_B_2	7.94
PF13483	Lactamase_B_3	3.97
PF00730	HhH-GPD	3.17
PF07690	MFS_1	3.17
PF07969	Amidohydro_3	2.38
PF00440	TetR_N	1.59
PF13459	Fer4_15	0.79
PF13370	Fer4_13	0.79
PF13452	MaoC_dehydrat_N	0.79
PF07908	Obsolete Pfam Family	0.79
PF02769	AIRS_C	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	15.08
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	3.17
COG0177	Endonuclease III	Replication, recombination and repair [L]	3.17
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	3.17
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	3.17
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	3.17

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.02 %
Unclassified	root	N/A	26.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.02 %
Unclassified	root	N/A	26.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.02 %
Unclassified	root	N/A	26.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.25 %
Unclassified	root	N/A	26.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.25 %
Unclassified	root	N/A	26.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.62 %
Unclassified	root	N/A	26.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	15.08 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.73 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	15.08 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.98 %
Actinacidiphila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila	15.08 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.98 %
Actinacidiphila oryziradicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	15.08 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	8.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005166\|Ga0066674_10090926	Not Available	1411	Open in IMG/M
3300005167\|Ga0066672_10123533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1603	Open in IMG/M
3300005168\|Ga0066809_10109121	Not Available	685	Open in IMG/M
3300005169\|Ga0066810_10006178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1606	Open in IMG/M
3300005177\|Ga0066690_10929289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300005178\|Ga0066688_10073625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2035	Open in IMG/M
3300005179\|Ga0066684_10269293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1123	Open in IMG/M
3300005184\|Ga0066671_10234536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1122	Open in IMG/M
3300005332\|Ga0066388_100000032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	39784	Open in IMG/M
3300005332\|Ga0066388_100925546	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300005436\|Ga0070713_101484985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300005445\|Ga0070708_100003657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12062	Open in IMG/M
3300005447\|Ga0066689_10066106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1989	Open in IMG/M
3300005467\|Ga0070706_100199878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1867	Open in IMG/M
3300005468\|Ga0070707_100169678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2126	Open in IMG/M
3300005471\|Ga0070698_100562986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1079	Open in IMG/M
3300005540\|Ga0066697_10154348	Not Available	1357	Open in IMG/M
3300005552\|Ga0066701_10621251	Not Available	656	Open in IMG/M
3300005553\|Ga0066695_10472966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	772	Open in IMG/M
3300005555\|Ga0066692_10164988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1368	Open in IMG/M
3300005556\|Ga0066707_10470261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300005560\|Ga0066670_10148447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1367	Open in IMG/M
3300005568\|Ga0066703_10501603	Not Available	720	Open in IMG/M
3300005586\|Ga0066691_10153213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1327	Open in IMG/M
3300005587\|Ga0066654_10082390	Not Available	1512	Open in IMG/M
3300005713\|Ga0066905_100669542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	887	Open in IMG/M
3300005713\|Ga0066905_102018186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005764\|Ga0066903_100546991	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300005764\|Ga0066903_100811777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1675	Open in IMG/M
3300005764\|Ga0066903_104138648	Not Available	777	Open in IMG/M
3300006031\|Ga0066651_10384008	Not Available	751	Open in IMG/M
3300006032\|Ga0066696_10084395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1873	Open in IMG/M
3300006046\|Ga0066652_100867703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	862	Open in IMG/M
3300006046\|Ga0066652_102078196	Not Available	504	Open in IMG/M
3300006049\|Ga0075417_10009465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3551	Open in IMG/M
3300006572\|Ga0074051_11115566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	823	Open in IMG/M
3300006581\|Ga0074048_12999145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300006800\|Ga0066660_10162958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1665	Open in IMG/M
3300006844\|Ga0075428_100034226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5605	Open in IMG/M
3300006844\|Ga0075428_100150468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2528	Open in IMG/M
3300006845\|Ga0075421_100133771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3107	Open in IMG/M
3300006845\|Ga0075421_101936801	Not Available	630	Open in IMG/M
3300009012\|Ga0066710_101310106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1123	Open in IMG/M
3300009088\|Ga0099830_10329428	Not Available	1224	Open in IMG/M
3300009089\|Ga0099828_11608093	Not Available	572	Open in IMG/M
3300009100\|Ga0075418_10109883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2928	Open in IMG/M
3300009137\|Ga0066709_104410726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300009147\|Ga0114129_10188773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2800	Open in IMG/M
3300009789\|Ga0126307_10009955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	6869	Open in IMG/M
3300009789\|Ga0126307_11616952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300009840\|Ga0126313_10059674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	2717	Open in IMG/M
3300010036\|Ga0126305_10400343	Not Available	905	Open in IMG/M
3300010041\|Ga0126312_10005005	All Organisms → cellular organisms → Bacteria	8940	Open in IMG/M
3300010042\|Ga0126314_10003668	All Organisms → cellular organisms → Bacteria	7895	Open in IMG/M
3300010043\|Ga0126380_10060896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	2092	Open in IMG/M
3300010043\|Ga0126380_12274559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300010045\|Ga0126311_10098920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1998	Open in IMG/M
3300010046\|Ga0126384_10598753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	965	Open in IMG/M
3300010047\|Ga0126382_10451027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300010166\|Ga0126306_10025701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3937	Open in IMG/M
3300010166\|Ga0126306_10063876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2583	Open in IMG/M
3300010322\|Ga0134084_10034983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1423	Open in IMG/M
3300010366\|Ga0126379_10204697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1902	Open in IMG/M
3300010398\|Ga0126383_10366827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1466	Open in IMG/M
3300011269\|Ga0137392_11283899	Not Available	591	Open in IMG/M
3300012199\|Ga0137383_10602412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	804	Open in IMG/M
3300012200\|Ga0137382_10069713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2251	Open in IMG/M
3300012206\|Ga0137380_10763481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	836	Open in IMG/M
3300012210\|Ga0137378_10388664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1295	Open in IMG/M
3300012211\|Ga0137377_11507026	Not Available	598	Open in IMG/M
3300012285\|Ga0137370_10473178	Not Available	765	Open in IMG/M
3300012350\|Ga0137372_10817327	Not Available	668	Open in IMG/M
3300012351\|Ga0137386_10702323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	727	Open in IMG/M
3300012354\|Ga0137366_10297955	Not Available	1187	Open in IMG/M
3300012356\|Ga0137371_11163150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300012357\|Ga0137384_11371165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	555	Open in IMG/M
3300012359\|Ga0137385_10312132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1351	Open in IMG/M
3300012360\|Ga0137375_10472099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1075	Open in IMG/M
3300012362\|Ga0137361_11754495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300012683\|Ga0137398_10831358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300012958\|Ga0164299_11634122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300012971\|Ga0126369_10520420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1250	Open in IMG/M
3300012971\|Ga0126369_11181719	Not Available	855	Open in IMG/M
3300012971\|Ga0126369_11385047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300012975\|Ga0134110_10106382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1136	Open in IMG/M
3300012975\|Ga0134110_10325475	Not Available	668	Open in IMG/M
3300012986\|Ga0164304_10257662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300012989\|Ga0164305_10589842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	891	Open in IMG/M
3300015241\|Ga0137418_11188562	Not Available	537	Open in IMG/M
3300018027\|Ga0184605_10416682	Not Available	597	Open in IMG/M
3300018054\|Ga0184621_10098378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1033	Open in IMG/M
3300018072\|Ga0184635_10083548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1254	Open in IMG/M
3300018073\|Ga0184624_10101944	Not Available	1229	Open in IMG/M
3300018076\|Ga0184609_10044173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1882	Open in IMG/M
3300018078\|Ga0184612_10069698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1834	Open in IMG/M
3300018081\|Ga0184625_10045964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2176	Open in IMG/M
3300018431\|Ga0066655_10171022	Not Available	1313	Open in IMG/M
3300018468\|Ga0066662_10877706	Not Available	878	Open in IMG/M
3300018469\|Ga0190270_10216504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1634	Open in IMG/M
3300018481\|Ga0190271_13346600	Not Available	537	Open in IMG/M
3300018482\|Ga0066669_11437589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300021078\|Ga0210381_10118902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	874	Open in IMG/M
3300021559\|Ga0210409_11001856	Not Available	710	Open in IMG/M
3300022756\|Ga0222622_10253692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	1193	Open in IMG/M
3300025910\|Ga0207684_10043249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3818	Open in IMG/M
3300025922\|Ga0207646_10867753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	802	Open in IMG/M
3300025928\|Ga0207700_10158309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1879	Open in IMG/M
3300026295\|Ga0209234_1019099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2591	Open in IMG/M
3300026309\|Ga0209055_1045682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1913	Open in IMG/M
3300026310\|Ga0209239_1099368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300027560\|Ga0207981_1059898	Not Available	696	Open in IMG/M
3300027775\|Ga0209177_10346686	Not Available	580	Open in IMG/M
3300027862\|Ga0209701_10103134	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300027873\|Ga0209814_10007910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4138	Open in IMG/M
3300027907\|Ga0207428_10172227	Not Available	1639	Open in IMG/M
3300027909\|Ga0209382_10101990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3361	Open in IMG/M
3300027909\|Ga0209382_10307825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1785	Open in IMG/M
3300027909\|Ga0209382_11454212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300028787\|Ga0307323_10079891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166	Open in IMG/M
3300028796\|Ga0307287_10322967	Not Available	583	Open in IMG/M
3300028878\|Ga0307278_10220405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila oryziradicis	844	Open in IMG/M
3300028878\|Ga0307278_10328528	Not Available	675	Open in IMG/M
3300028881\|Ga0307277_10327173	Not Available	682	Open in IMG/M
3300031152\|Ga0307501_10045069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300033550\|Ga0247829_10139729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1876	Open in IMG/M
3300033551\|Ga0247830_10491656	Not Available	964	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.48%
Host-Associated	Host-Associated	9.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.33%
Plants	Host-Associated → Plants	9.52%
Aquatic	Environmental → Aquatic	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.52%
Sediment	Environmental → Aquatic → Sediment	6.35%
Freshwater	Environmental → Aquatic → Freshwater	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.43%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.35%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066674_100909261	3300005166	Soil	VTRLHPRSANVVQLRPGLGENCRDALATAASHFNGAVGELDRVLSRVGGHLDETVRASRAAIRAGKLAYREQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066672_101235332	3300005167	Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDSVLGRVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066809_101091212	3300005168	Soil	VTRLHAHHANVVPLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDQLDETIRASRAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNTR*
Ga0066810_100061782	3300005169	Soil	VTRLHAHHANVVPLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGRLAYRQQRQRDRVRGPLGLDAGYTPSNTR*
Ga0066690_109292892	3300005177	Soil	VTAPHVRHANVVVLRPGLGEACRDALATAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066688_100736251	3300005178	Soil	VTAPHARHANVVVLRPGLGEACRDALAAAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066684_102692932	3300005179	Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDRMLSQVGDHLDDRVRAGRAAFRAGKLAYRQQRQRDRVRGPLGLVAGY
Ga0066671_102345362	3300005184	Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDRMLSQVGDHLDDRVRAGRAAFRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066388_1000000325	3300005332	Tropical Forest Soil	VTRAHPSHANVVILRPDLGQTVRGVLASAAGHFNLAVSELDRVLARVGDRLDETVRAGQVAVRAGRLAYRQQRHQDRVRGPLGLVAGYTPSNNR*
Ga0066388_1009255462	3300005332	Tropical Forest Soil	MSTRTAHPRHANVVHLRRGLVESCRGVLARAAGRFDDAVGELDRVLARVGDRLDETVRAGQAAVRAGKLAYRQQRQRDRIRGPLGLVAGYKPSNNR*
Ga0070713_1014849852	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEYPTPGGGLVTRSLPGQANVVFLRPPYRDVLAAAAGHFNDAVGELDRVLSGVGDQLDERVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0070708_10000365712	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLHPRSANVVVLRPALGETCRDALATAASHFNDAVGELDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066689_100661062	3300005447	Soil	VTTPHARHANVVVLRPGLGETCRDALATAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0070706_1001998781	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHLDETVRASRAAIRAGTLAYRQQRQRDRLRGPLGLVAGYTPSNRR*
Ga0070707_1001696783	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR*
Ga0070698_1005629862	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTRVHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR*
Ga0066697_101543482	3300005540	Soil	VTRLHPRSANVVPLRPGLRETCRDALVTAALHFNDAVGDLDRVLSRVGGHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066701_106212512	3300005552	Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDSVLGRVGDHLGERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVPGYTPSNRR*
Ga0066695_104729661	3300005553	Soil	VTAPHARHANVVVLRPGLGEACRDALAAAASHFNEAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066692_101649882	3300005555	Soil	VTRLHADHANVAVLRPSLGETCRDAVATAASHFNDAVGEVDRVLSRVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVPGYTPSNRR*
Ga0066707_104702611	3300005556	Soil	VTRLHADHANVAVLGPSVGETCRDAVVTAASHFNDVVGEVDRVLSRVGDHLDERVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066670_101484472	3300005560	Soil	VTRLHPRSANVVQLRPGLGETCRDALATAASHFNGAVGELDRVLSRVGGHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066703_105016032	3300005568	Soil	VTRLHARHANVVSLRPSLVATCRDALTTAASHFNDAVGEVDSVLGRVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066691_101532131	3300005586	Soil	VTRLHARHANVVSFRPSLGATCRDALATAASHFNDAVGEVDSVLARMGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066654_100823901	3300005587	Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDRMLSQVGDHLDDRVRAGRAAFRAGKLAYRQQRQRDRVRGPLGL
Ga0066905_1006695422	3300005713	Tropical Forest Soil	MTRPQPRSANVVVLRPGLAESCRGALGRAARHFNDAVGELDLVLARVGDRLDETARAGHAAIRAGRLAYRQQRRRDRVRGPLGLVPDYPPSNSR*
Ga0066905_1020181862	3300005713	Tropical Forest Soil	MGTTRPHPSHANVVVLRPGLVDGCRDVVSRAAGHFNQAVGELDRALARVGDRLDETVRAGQAAVRAGKLAYRQQRRQDRVRGPLGLVAGYTPSNNR*
Ga0066903_1005469913	3300005764	Tropical Forest Soil	MTRPQPRSVNVVVLRPGLAESCRGALGRAARHFNDAVGELDLVLARVGDRLDETARAGHAAIRAGRLAYRQQRRRDRVRGPLGLVPDYPPSNSR*
Ga0066903_1008117772	3300005764	Tropical Forest Soil	MTHTRPHSRHTNVVVLRPGLAESCRGVVSTAAGHFNDAVGELDRVLARVGDRLDETVRAGQAAIRAGKLAYRQQRRRDRVRGPLGLVAGYTPSNNR*
Ga0066903_1041386482	3300005764	Tropical Forest Soil	MSATRPHRRRANVLLLRRGLGDSCREALSRAAGHFDDAVGELDRVLARVGDRLDETVRAGRAAIRAGKLAYRQQRRRDRVRGPLGL
Ga0066651_103840082	3300006031	Soil	VTRLHARHANVVLLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDHLDETVRASRAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNNL*
Ga0066696_100843952	3300006032	Soil	VEYPTPGGGFVTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDRMLSQVGDHLDDRVRAGRAAFRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066652_1008677031	3300006046	Soil	VTRLHPRSANVVPLRPGLGETCRDALVTAASHFNDAVGELDRVLSRVGGHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0066652_1020781962	3300006046	Soil	VTRLHAHHANVVVLRPSLGETCRDAVTTAASHFNDAVGEVDRVLSRVGDHLDERVRAGRAAVRAGKLAYRQQRQRD
Ga0075417_100094652	3300006049	Populus Rhizosphere	VTRLHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHVDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR*
Ga0074051_111155662	3300006572	Soil	VTRLHAHHANVVPLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNTR*
Ga0074048_129991451	3300006581	Soil	VTRLHAHHANVVPLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNSR*
Ga0066660_101629582	3300006800	Soil	VEYPTPGGGLVTTPHARHANVVVLRPGLGETCRDALATAATHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQHDRVRGPLGLVAGYTPSNRR*
Ga0075428_1000342263	3300006844	Populus Rhizosphere	VTRLRPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHVDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR*
Ga0075428_1001504682	3300006844	Populus Rhizosphere	VEYPISVRWFVTRSLPGHGNVVSLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0075421_1001337714	3300006845	Populus Rhizosphere	VTRSLPGHGNVVVLRPTYRDVLAAAADHFNDAVGEVDRVLSQVGDHLDDTIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0075421_1019368011	3300006845	Populus Rhizosphere	VTRLHAHHANVVSLRPSYRDALAAAAGHFNNAVGEIDRVLSQVGDHLDETIRASRAAIRAGRLAYRQQRQRHRVRGPLGLVAGYTPSNSR*
Ga0066710_1013101061	3300009012	Grasslands Soil	VGALRPGRGEACRYALAAAAAHFNDAVGEVDRVLARVGDHLDERERAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0099830_103294282	3300009088	Vadose Zone Soil	VARQHPRHANVFVLRWSSRDALTAAAEGFNDAVAELDRLLSGVGDRVDETVHATRAAIRAGKLAFEQERRRERVRGPVGLVAGYKPSNSG*
Ga0099828_116080931	3300009089	Vadose Zone Soil	TAPGRWFLAQQHPRPANVVALHRPCRDVLGAAVTQFNDAVAELDRVLSRVGDRVDETIHATRAAVRAGKLAYQQQRRREQVRGPLGLVSGYRPSNSR*
Ga0075418_101098833	3300009100	Populus Rhizosphere	VTRSLPGHGNVVSLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0066709_1044107261	3300009137	Grasslands Soil	VTRLHADHANVAVLRPSLGETCRDAVATAASHFNDAVGEVDRVLSGVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVPGYTPSNRR*
Ga0114129_101887733	3300009147	Populus Rhizosphere	VTRSLPGHGNVVSLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYSPSNNR*
Ga0126307_100099555	3300009789	Serpentine Soil	VSRSLPRHANVVLLRPSYRDVLAAAAGHFNDAVGELDRVLSRVGDHLDETARASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0126307_116169521	3300009789	Serpentine Soil	RWLVNELRPRHASVVPLRPSIGDALATAAGHFNDAVGELDRVLCRVSDHLDDTIRASRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNKR*
Ga0126313_100596744	3300009840	Serpentine Soil	MSKTRSLPRHANVVLLRPSYRDVLAAAAGHFNDAVGELDRVLCQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRARGPLGLVAGYTPSNNR*
Ga0126305_104003432	3300010036	Serpentine Soil	MSKTRSLPRHANVVLLRPSYRDVLATAAGHFNDAVGELDRVLCQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRARGPLGLVAGYTPSNNR*
Ga0126312_100050054	3300010041	Serpentine Soil	MSKTRSLPRHANVVLLRPSYGDLLAAAAGHFNDAVGELDRVLCQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRARGPLGLVAGYTPSNNR*
Ga0126314_100036688	3300010042	Serpentine Soil	MSKARFLPRHANVVLLRPSYRDVLATAAGHFNDAVGELDRVLCQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRARGPLGLVAGYTPSNNR*
Ga0126380_100608963	3300010043	Tropical Forest Soil	MGTTRPHPSHANVVVLRPGLVDGCRDVVSRAAGHFNQAVGELDRALARVGDQLDETVRAGQAAVRAGKLAYRQQRRQDRVRGPLGLVAGYTPSNNR*
Ga0126380_122745592	3300010043	Tropical Forest Soil	VNVVVLRPGLAESCRGALGRAARHFNDAVGELDLVLARVRDRLDETARAGHAAIRAGRLAYRQQRRRDRVRGPLGLVPDYPPSNSR*
Ga0126311_100989202	3300010045	Serpentine Soil	MSKTRSLPRHANVVLLRPSYRDVLAAAAGHFNDAVGELDRVLCQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRASGPLGLVAGYTPSNNR*
Ga0126384_105987531	3300010046	Tropical Forest Soil	MSNTRLHPRHANVVLLRPGLAESCRGALSRAAGHFNDAVGELDRVLARVGDRLDETVRAGHAAIRAGRLAYRQQRQRDRVRGPLGLV
Ga0126382_104510272	3300010047	Tropical Forest Soil	MSHTRLHPRHANVVLLRPGLAESCRGALSRAAGHFNDAVGELDRVLARVGDRLDETVRAGHAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0126306_100257015	3300010166	Serpentine Soil	VKQLRPRHANLVPLRPSIRDALASAAGQFNDAVGELDRVLCRVSDHLDDTIRASRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNKR*
Ga0126306_100638762	3300010166	Serpentine Soil	MSKARFLHRHANVVLLRPSYRDVLATAAGHFNDAVGELDRVLCQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRARGPLGLVAGYTPSNNR*
Ga0134084_100349832	3300010322	Grasslands Soil	VTRLHPRSANVVTLRPGLGETCRDALVTAASHFNDAVGELDRVLSRVGGHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0126379_102046971	3300010366	Tropical Forest Soil	VNVVVLRPGLAESCRGALGRAARHFNDAVGELDLVLARVGDRLDETARAGHAAIRAGRLAYRQQRRRDRVRGPLGLVPDYPPSNSR*
Ga0126383_103668272	3300010398	Tropical Forest Soil	MSHTRLHPRHANVVLLRPGLAESCRGALSRAAGHFNDAVGELDRVLARVGDRLDETVRAGQAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0137392_112838991	3300011269	Vadose Zone Soil	RQHPRHANVIVLRWSYRDALTAAAEGFNDAVAELDRLLSGVGDRVDETVHATRAAIRAGKLAFEQERRRERVRGPVGLVAGYKPSNSG*
Ga0137383_106024122	3300012199	Vadose Zone Soil	TPGGAFVTTPHARHANVVVVLRPGLGGTCRDALATAASHFNDAVGEVDRVLSRVGDHLDERVRAGQAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137382_100697132	3300012200	Vadose Zone Soil	VTAPHARHANVVVLRPGLGETCRDALATAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137380_107634812	3300012206	Vadose Zone Soil	VTAPHARHANVVVLRPSLGATCRDALATAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137378_103886642	3300012210	Vadose Zone Soil	VTRPHPTHANVVVLRPSYRDTLESATVRFNDTVEHLDRALSRVGDHVDGTIAACRAAVRAGRLAFEQERRRERVRGPVGLVPGYTPSNSR*
Ga0137377_115070262	3300012211	Vadose Zone Soil	VTRLHARHANVVVLRPSLGATCRDALTTAASHFNDAVGEVDSVLARMGDHVDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137370_104731782	3300012285	Vadose Zone Soil	VEYPTPGGGFVTTPHARHANVVVLRPGLGEACWDALAAAASHFNDAVGEVDRVLARAGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137372_108173271	3300012350	Vadose Zone Soil	SGEIPWSIRSPGGGLVTRLHPRSANVVRLRPGLGETCRDALATATSHFNDAVGELDRVLSRVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137386_107023232	3300012351	Vadose Zone Soil	PTPGGGLVTTPHARHANVVVLRPGLGEACRDALSTAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137366_102979552	3300012354	Vadose Zone Soil	VEYPTPGGGLVTRLHARHANVVVLRPSLGETYRDALATAASHFNDAVGEVDRVLSRVGDHLDETVRASRAAIRAGRLAYRQQRQR
Ga0137371_111631502	3300012356	Vadose Zone Soil	VTRLHARHANVVVLRPRLGETCRDALATATSHFNDHVGELARVLSRVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYPPSNRR*
Ga0137384_113711651	3300012357	Vadose Zone Soil	VTRLRARPANVVRLRPSYRDALAAAAGHFNDAVGEADRVLSRVGDHFDERVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137385_103121322	3300012359	Vadose Zone Soil	VHARHANVVVLRPSLDETCRDALATAASHFNDAVGEVDSVLARVGDHLDERMRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137375_104720991	3300012360	Vadose Zone Soil	MSKTRSLPGQANVVLLRPSYRDVLAAAAGDFNDAVGELDRVLSRVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR*
Ga0137361_117544951	3300012362	Vadose Zone Soil	HANVVVLRPGLGEACRDALAAAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0137398_108313581	3300012683	Vadose Zone Soil	VEYPTLGGGLVTTPHARHANVVVLRPGLGETCRDALATAASHFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQSDRVRGPLGLVAGYTPSNRR*
Ga0164299_116341222	3300012958	Soil	ETCRDALETATSHFNDAVGEVDRVLSRVGDHLDERVRAGRAALRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0126369_105204202	3300012971	Tropical Forest Soil	RSHPSQANVVLLHPGLEETCRQVLASAAGHFNGAVGELDLVLSRVGDRLDETVRAGQAAIRAGKLAYRQQRRRDRVRGPLGLVAGYTPSNSR*
Ga0126369_111817192	3300012971	Tropical Forest Soil	MSATRPHDRRANVVLLRPGLADSCREALSRAAGHFDDAVSELDRVLARVGDRLDETVRAGQAAIRAGKLAYRQQRRRDRVRGPLGLVAGYTPSNSR*
Ga0126369_113850471	3300012971	Tropical Forest Soil	VNVVVLRPGLAESCRGALGRAARHFNDAVGELDLVLARVGDRLDETTRAGHAAIRAGRLAYRQQRRRDRVRGPLGLVPDYPPSNSR*
Ga0134110_101063822	3300012975	Grasslands Soil	VTRLHPRSANVVPLRPGVGETCRDALATAASHFNGAVGELDRVLSRVGGHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0134110_103254752	3300012975	Grasslands Soil	GPVTRLHAHHANVVVLRPSLGETCRDAVTTAASHFNDAVGEVDRVLSRVGDHLDETVRASRAAIRAGKLAYRQQRRRDRVRGPLGLVAGYTPSNRR*
Ga0164304_102576622	3300012986	Soil	VTRSLPGQANVVFLRPPYRDVLAAAAGHFNDAVGELDRVLSGVGDQLDERVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR*
Ga0164305_105898421	3300012989	Soil	VTRSLPGQANVVFLRPPYRDVLAAAAGHFNDAVGELDRVLSGVGDQLDERVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRP*
Ga0137418_111885622	3300015241	Vadose Zone Soil	GETCRDALATAASQFNDAVGEVDRVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDTVRGPLGLVAGYTPSNRR*
Ga0184605_104166821	3300018027	Groundwater Sediment	VTRLHARHANVVMLRPSYRDVLSTAAGHFNDAVGEVDRVLSQVGDHRDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGL
Ga0184621_100983781	3300018054	Groundwater Sediment	VEYPTPGGGLVTRLHARHANVVLLRPSYRDALAAAAGHFNDAVGEVDHVLSQVGDHLDETVRASRAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0184635_100835482	3300018072	Groundwater Sediment	VTRLHVRHANVVLLRPSYRDALTAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0184624_101019442	3300018073	Groundwater Sediment	VEYPISVRWLVARSLSRHANVVLLRPSYRDALTAAAGHFNDAVGEVDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0184609_100441733	3300018076	Groundwater Sediment	VTRLHVRHANVVLLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0184612_100696982	3300018078	Groundwater Sediment	VTRLHVRHANVVLLRPSYRDALTAAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0184625_100459642	3300018081	Groundwater Sediment	VTRLHVRHANVVLLRPSYRDALTAAAGHFNDAVGEVDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0066655_101710222	3300018431	Grasslands Soil	VTRLHPRSANVVPLRPGVGETCRDALATAASHFNGAVGELDRVLSRVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0066662_108777062	3300018468	Grasslands Soil	VTRLHARHANVVSLRPSLGATCRGALATAASHFNDAVGEVDSVLGRVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSKRR
Ga0190270_102165042	3300018469	Soil	VTRLHARHANVVLLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0190271_133466002	3300018481	Soil	VTGSLARNDKVVLLRPSYRDALAAASGHFNDAVGEVDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0066669_114375892	3300018482	Grasslands Soil	VTRLHPRSANVVPLRPGLGETCRDALVTAASHFNGAVGELDRVLSRVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGY
Ga0210381_101189022	3300021078	Groundwater Sediment	VTRLHARHANVVLLRPSYRDALAAAAGHFNDAVGEVDRVLCQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDR
Ga0210409_110018562	3300021559	Soil	VTRLARHANVVVLRPSLGETCRDAVATAASHFNDAVGEVDRVLSRVGDQVDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0222622_102536922	3300022756	Groundwater Sediment	VTRLHARHANVVLLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0207684_100432492	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTRLHPRSANVVVLRPALGETCRDALATAASHFNDAVGELDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0207646_108677532	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTRVHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHLDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR
Ga0207700_101583091	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEYPTPGGGLVTRSLPGQANVVFLRPPYRDVLAAAAGHFNDAVGELDRVLSGVGDQLDERARAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0209234_10190992	3300026295	Grasslands Soil	VEYQTPGGGLVTRLHARHANVVVLRPSLGATCRDALATAASHFNDAVGEVDRVLSRVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0209055_10456821	3300026309	Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDSVLGRVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0209239_10993682	3300026310	Grasslands Soil	VTRLHARHANVVSLRPSLGATCRDALATAASHFNDAVGEVDSVLARVGDHLDERVRAGRAAVRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNRR
Ga0207981_10598981	3300027560	Soil	YPTPGGGLVTRLHAHHANVVPLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDQLDETIRASRAAIRAGRLAYRQQRQRDLVRGPLGLVAGYTPSNSR
Ga0209177_103466862	3300027775	Agricultural Soil	VTRLHPRRANVVVLRPDLGETCRDALATAATHFNDAVGELDRVLSQVGDHVDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR
Ga0209701_101031341	3300027862	Vadose Zone Soil	VARQHPRHANVFVLRWSSRDALTAAAEGFNDAVAELDRLLSGVGDRVDETVHATRAAIRAGKLAFEQERRRERVRGPIGLV
Ga0209814_100079103	3300027873	Populus Rhizosphere	VTRLHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGDHVDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNRR
Ga0207428_101722271	3300027907	Populus Rhizosphere	VTRLHPRRANVVVLRPDLGETCRDALATAASHFNDAVGELDRVLSQVGEHVDETVRASRAAIRAGKLAYRQQRQRDRLRGPLGLVAGYTPSNTR
Ga0209382_101019905	3300027909	Populus Rhizosphere	VTRSLPGHGNVVVLRPTYRDVLAAAADHFNDAVGEVDRVLSQVGDHLDDTIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0209382_103078253	3300027909	Populus Rhizosphere	RGDTVEYPISVRWFVTRSLPGHGNVVSLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDHLDETIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0209382_114542122	3300027909	Populus Rhizosphere	VTRLHAHHANVVSLRPSYRDALAAAAGHFNNAVGEIDRVLSQVGDHLDETIRASRAAIRAGRLAYRQQRQRHRVRGPLGLVAGYTPSNSR
Ga0307323_100798911	3300028787	Soil	VTRLHARHANVVLLRPSYRDVLSTAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0307287_103229671	3300028796	Soil	LHARHANVVLLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETVRASRAAIRAGRLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0307278_102204051	3300028878	Soil	TRLHARHANVVMLRPSYRDVLSTAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0307278_103285281	3300028878	Soil	VTRLHARHANVVLLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0307277_103271731	3300028881	Soil	VTRLHARHANVVMLRPSYRDVLSTAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0307501_100450692	3300031152	Soil	VTRLHDRHANVALLRPSYRDALAAAAGHFNDAVGEVDRVLSQVGDHLDETVRAGRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNR
Ga0247829_101397292	3300033550	Soil	VEYPISVRWRVTRSLPGHRNVVSLRSSYRDVLAAAAGHFNDAVGEVDRVLSQVGDQVDETIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNP
Ga0247830_104916562	3300033551	Soil	VEYPISVRWRVTRSLPGHRNVVSLRPSYRDVLAAAAGHFNDAVGEVDRVLSQVGDQVDETIRASRAAIRAGKLAYRQQRQRDRVRGPLGLVAGYTPSNNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066762

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences