Metagenome / Metatranscriptome Family F066721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066721
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	114 residues
Representative Sequence	AEMAADDAAVASAGEALDLAAALIKLSRLGPVETPVDLTAALVHSPAAIMNARVERLIAWSEDRLVLPRRFSPWYGMGAALATVAVFAVTYSRLLVHVHTATEWLVR
Number of Associated Samples	109
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.54 %
% of genes near scaffold ends (potentially truncated)	88.89 %
% of genes from short scaffolds (< 2000 bps)	79.37 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.254 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.079 % of family members)
Environment Ontology (ENVO)	Unclassified (22.222 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.22% β-sheet: 0.00% Coil/Unstructured: 37.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01261	AP_endonuc_2	7.94
PF11005	DUF2844	2.38
PF13620	CarboxypepD_reg	1.59
PF02687	FtsX	0.79
PF00248	Aldo_ket_red	0.79
PF07883	Cupin_2	0.79
PF04191	PEMT	0.79
PF00593	TonB_dep_Rec	0.79
PF04055	Radical_SAM	0.79
PF13282	DUF4070	0.79
PF13803	DUF4184	0.79
PF07592	DDE_Tnp_ISAZ013	0.79
PF04008	Adenosine_kin	0.79
PF00909	Ammonium_transp	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.79
COG1839	Adenosine/AMP kinase	Nucleotide transport and metabolism [F]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.25 %
Unclassified	root	N/A	31.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.94 %
Unclassified	root	N/A	31.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.05 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.17 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.05 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.17 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.79 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.05 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.17 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.79 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.05 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.79 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.79 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.05 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.79 %
Candidatus Brocadia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia	0.79 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.05 %
Candidatus Brocadia sinica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	0.79 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.79 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10328215	Not Available	544	Open in IMG/M
3300001546\|JGI12659J15293_10043086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300001593\|JGI12635J15846_10182697	All Organisms → cellular organisms → Bacteria → Acidobacteria	1405	Open in IMG/M
3300004152\|Ga0062386_100165264	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300005436\|Ga0070713_101629377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300005437\|Ga0070710_10050604	All Organisms → cellular organisms → Bacteria → Acidobacteria	2330	Open in IMG/M
3300005542\|Ga0070732_10506537	Not Available	731	Open in IMG/M
3300005542\|Ga0070732_10596341	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005712\|Ga0070764_10401842	Not Available	809	Open in IMG/M
3300005952\|Ga0080026_10045001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300005952\|Ga0080026_10143793	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005995\|Ga0066790_10050033	All Organisms → cellular organisms → Bacteria → Acidobacteria	1808	Open in IMG/M
3300006052\|Ga0075029_100074348	Not Available	2003	Open in IMG/M
3300006052\|Ga0075029_101211967	Not Available	527	Open in IMG/M
3300006086\|Ga0075019_10076061	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300006162\|Ga0075030_100337895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300006162\|Ga0075030_101286367	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300006162\|Ga0075030_101340558	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	561	Open in IMG/M
3300006640\|Ga0075527_10108912	Not Available	769	Open in IMG/M
3300009523\|Ga0116221_1234793	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300009524\|Ga0116225_1015904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3958	Open in IMG/M
3300009524\|Ga0116225_1391525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300009616\|Ga0116111_1069538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300009635\|Ga0116117_1033332	All Organisms → cellular organisms → Bacteria → Acidobacteria	1278	Open in IMG/M
3300009638\|Ga0116113_1161608	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300009698\|Ga0116216_10582154	Not Available	675	Open in IMG/M
3300009824\|Ga0116219_10439036	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300009824\|Ga0116219_10791376	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300009839\|Ga0116223_10339679	Not Available	891	Open in IMG/M
3300010360\|Ga0126372_13102905	Not Available	516	Open in IMG/M
3300010361\|Ga0126378_11993429	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300010366\|Ga0126379_11783745	Not Available	719	Open in IMG/M
3300010379\|Ga0136449_100440639	All Organisms → cellular organisms → Bacteria → Acidobacteria	2290	Open in IMG/M
3300010937\|Ga0137776_1653439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	878	Open in IMG/M
3300011270\|Ga0137391_10458102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300012207\|Ga0137381_10365524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300012210\|Ga0137378_10412122	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300012210\|Ga0137378_10552288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300012683\|Ga0137398_10627463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012923\|Ga0137359_11329794	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300012930\|Ga0137407_11435971	Not Available	656	Open in IMG/M
3300014169\|Ga0181531_10862393	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300014501\|Ga0182024_10124075	All Organisms → cellular organisms → Bacteria	3686	Open in IMG/M
3300017932\|Ga0187814_10218512	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300017955\|Ga0187817_10474329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300017959\|Ga0187779_10020853	All Organisms → cellular organisms → Bacteria	3737	Open in IMG/M
3300018006\|Ga0187804_10327533	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300018034\|Ga0187863_10360680	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300018037\|Ga0187883_10370778	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300018042\|Ga0187871_10139754	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300018046\|Ga0187851_10050468	All Organisms → cellular organisms → Bacteria → Acidobacteria	2721	Open in IMG/M
3300018062\|Ga0187784_10066023	All Organisms → cellular organisms → Bacteria	2934	Open in IMG/M
3300019270\|Ga0181512_1055246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300020581\|Ga0210399_10131971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2056	Open in IMG/M
3300021171\|Ga0210405_10361162	Not Available	1145	Open in IMG/M
3300021171\|Ga0210405_10553741	Not Available	898	Open in IMG/M
3300021181\|Ga0210388_11776589	Not Available	508	Open in IMG/M
3300021402\|Ga0210385_10423380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300021403\|Ga0210397_10394693	Not Available	1033	Open in IMG/M
3300021403\|Ga0210397_11479026	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300021407\|Ga0210383_10049587	All Organisms → cellular organisms → Bacteria → Proteobacteria	3500	Open in IMG/M
3300021407\|Ga0210383_11346871	Not Available	595	Open in IMG/M
3300021420\|Ga0210394_10847220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300021432\|Ga0210384_10341490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1348	Open in IMG/M
3300021474\|Ga0210390_11335645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300021477\|Ga0210398_10058025	All Organisms → cellular organisms → Bacteria → Acidobacteria	3165	Open in IMG/M
3300021478\|Ga0210402_11866611	Not Available	527	Open in IMG/M
3300021479\|Ga0210410_10550128	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300021479\|Ga0210410_11257890	Not Available	632	Open in IMG/M
3300021559\|Ga0210409_11333914	Not Available	593	Open in IMG/M
3300022557\|Ga0212123_10558018	Not Available	731	Open in IMG/M
3300022716\|Ga0242673_1135604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300022722\|Ga0242657_1123333	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300025434\|Ga0208690_1007120	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300026557\|Ga0179587_10337991	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300027559\|Ga0209222_1042122	Not Available	879	Open in IMG/M
3300027625\|Ga0208044_1176228	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300027641\|Ga0208827_1179850	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300027842\|Ga0209580_10435775	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300027842\|Ga0209580_10645621	Not Available	524	Open in IMG/M
3300027854\|Ga0209517_10573454	Not Available	602	Open in IMG/M
3300027895\|Ga0209624_10054576	Not Available	2561	Open in IMG/M
3300027895\|Ga0209624_10077753	All Organisms → cellular organisms → Bacteria → Acidobacteria	2146	Open in IMG/M
3300027898\|Ga0209067_10784062	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300027903\|Ga0209488_10981100	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300027908\|Ga0209006_10777674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300028747\|Ga0302219_10387834	Not Available	546	Open in IMG/M
3300028759\|Ga0302224_10434863	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300028792\|Ga0307504_10426232	Not Available	527	Open in IMG/M
3300028798\|Ga0302222_10248381	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300029882\|Ga0311368_10252171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1363	Open in IMG/M
3300030054\|Ga0302182_10232537	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300030494\|Ga0310037_10226572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300030659\|Ga0316363_10211988	Not Available	802	Open in IMG/M
3300030730\|Ga0307482_1222364	Not Available	582	Open in IMG/M
3300030862\|Ga0265753_1055884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300030878\|Ga0265770_1116238	Not Available	558	Open in IMG/M
3300031090\|Ga0265760_10227966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300031231\|Ga0170824_116905984	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300031234\|Ga0302325_11380837	Not Available	918	Open in IMG/M
3300031234\|Ga0302325_13011339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300031236\|Ga0302324_101653928	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300031249\|Ga0265339_10041843	All Organisms → cellular organisms → Bacteria → Acidobacteria	2540	Open in IMG/M
3300031446\|Ga0170820_10384972	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300031474\|Ga0170818_107776640	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224	Open in IMG/M
3300031820\|Ga0307473_11345912	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300032160\|Ga0311301_11376107	Not Available	883	Open in IMG/M
3300032783\|Ga0335079_12215942	Not Available	524	Open in IMG/M
3300032783\|Ga0335079_12253764	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300032805\|Ga0335078_10360442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1927	Open in IMG/M
3300032828\|Ga0335080_10067208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3972	Open in IMG/M
3300032892\|Ga0335081_10819332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300032892\|Ga0335081_11717554	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300032893\|Ga0335069_10321436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1836	Open in IMG/M
3300032895\|Ga0335074_10248507	All Organisms → cellular organisms → Bacteria → Acidobacteria	2096	Open in IMG/M
3300032955\|Ga0335076_10014969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7795	Open in IMG/M
3300033547\|Ga0316212_1070885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300034125\|Ga0370484_0137303	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.41%
Host-Associated	Host-Associated	1.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.37%
Aquatic	Environmental → Aquatic	19.05%
Plants	Host-Associated → Plants	1.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.02%
Freshwater	Environmental → Aquatic → Freshwater	11.90%
Peat	Environmental → Terrestrial → Peat	6.35%
Sediment	Environmental → Aquatic → Sediment	5.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.59%
Roots	Host-Associated → Plants → Roots	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.90%
Loam	Environmental → Terrestrial → Soil → Loam	7.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.59%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.38%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.79%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.08%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.14%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.79%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103282151	3300001356	Peatlands Soil	AAAVSNAGEALDLAAALIKLSRLAPIEPATDLTTALVHSPASVMNARIERLIAWSDDRLALPPRFSPWYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR*
JGI12659J15293_100430862	3300001546	Forest Soil	EVAHVRRRDNLKKLLLRLVAFPGMRNLEGTWLEATEMAADDAAVSNACEALDLAEALIKLSRLTPPEPSAVLTAALIHSPTSVMNARIERLIAWSDERLVPLPRFSPRYGLGAALATVAVFATTYSQLLASVHTATEWLVR*
JGI12635J15846_101826973	3300001593	Forest Soil	DAAVSNACEALDLAEALIKLSRLTPPEPSAVLTAALIHSPTSVMNARIERLIAWSDERLVPLPRFSPRYGLGAALATVAVFATTYSQLLASVHTATEWLVR*
Ga0062386_1001652643	3300004152	Bog Forest Soil	TANELQTALNHESAHLRRRDNLKKLLLRFVAFPGMSSLEAAWLEVTEMAADDAAVANAAEALDLAAALIKLSRLGPVEMDSDEGASDLTAALVHSPVSVMNARVERLIAWTDERLASPRKFSGWRELGYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR*
Ga0066672_107306151	3300005167	Soil	NLKKLVLRAIAFPGMAGLESAWLDATEMAADDAAVSSSTEALDLAAALIKLSRFAQPEPSTEIMMALVHSPAASVNARVERLIDWSEGRKAPERGYSAWYALGVGLAVVAAFGVTYSQLLMHVHTATEWLVR*
Ga0070713_1016293771	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AGEALDLAAALIKLSRLGPVEPPVDLTAAMVHDPASIMNARVERLISWTADRRVPPRAPFWYGTAAAIATVAVFAVTYSHLLTRVHTATEWLVR*
Ga0070710_100506041	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ALDLAAALLKLSRIRPIVPAIDLTTALVLSPASVMNARIERLIAWSDERLVPSRRSSAWFRLSAALAAIAVCSITYSQLLVRVHAATEWLVR*
Ga0070732_105065372	3300005542	Surface Soil	DAAVSNAGDALDLAAALIKLSRLGPVEPPADLTAALVHSGASVMNARVERLIAWCDERRVPPQQHSPWYGVGAALATVAVFAVTYSQLLVHVHTATEWLVR*
Ga0070732_105963412	3300005542	Surface Soil	ATEMAADDAAVSDAAEALDLASALIKLSRLSPVEPPADLTAALVHSPAKVMNARVERLLAWTGDRRVPGRRHSPWYALAATIATVALFAVTYSPLLAHVHTATEWLVR*
Ga0066698_106653722	3300005558	Soil	AFPGMAGLESAWLDATEMAADDAAVSSSTEALDLAAALIKLSRFAQPEPSTEIMMALVHSPAASVNARVERLIDWSEGRKAPERGYSAWYALGVGLAVGAAFGVTYSQLLMHVHTATEWLVR*
Ga0066691_100859722	3300005586	Soil	LQTALRHELAHVRRRDNLKKLVLRAIAFPGMAGLESAWLDATEMAADDAAVSSSTEALDLAAALIKLSRFAQPEPSTEIMMALVHSPAASVNARVERLIDWSEGRKAPERGYSAWYALGVGLAVVAAFGVTYSQLLMHVHTATEWLVR*
Ga0070764_104018421	3300005712	Soil	EMAADDAAVSNTGEALDLAAALIKLSRLSPVEPPADLTAALVHSPGAVMNARVERLIAWSEERVVPPGGFSAWYGLGAALATVAISALTYGQLLVHVHAATEWLVR*
Ga0080026_100450012	3300005952	Permafrost Soil	EAAWLESTEMAADDAAVANAREALDLAAALIKLSRLAPSEPPADLTAALVHSLPCVMNARVERLIAWSDERFVSTRRFSPWYGLGAAAATAALFAVTYSQLLLRVHTATEWLVR*
Ga0080026_101437931	3300005952	Permafrost Soil	AAALIKLSRLGPVEAPVDFTAALVHSPASAMNARVERLITWCEERRVPAQTRSAWYGVGAAMATVAVFALTYSQLLVRVHTATEWLVR*
Ga0066790_100500331	3300005995	Soil	LEAAWLESTEMAADDAAVANAGEALDLAAALIKLSRLAPSEPHADLTAALVHSLPCVMNARVERLIAWSDERFVSTRRFSPWYGLGAAAATAALFAVTYSQLLVRVHTATEWLVR*
Ga0075029_1000743483	3300006052	Watersheds	DLAAALIKLSRLGTVEPSVDLTAALVHSPAAVMNARVERLLAWTELRRVPLRKNSSWYGVAAALATIAIFSVTYTQLLTHVHTATEWLVR*
Ga0075029_1012119671	3300006052	Watersheds	AALIKLSRLGPVEAPVDLTAALVHSPGAVMNARVERLIAWSDERLVSPPRFSPWSGVAAVLVAVAVFAITYSQLLAHVHTATEWLVR*
Ga0075019_100760611	3300006086	Watersheds	ALKHEVAHVSRRDNLKKLVLRFVAFPGMKGLEAAWLEATEMAADDAAVTNAGEALDLAAALIKLSRLGTVEPSVDLTAALVHSPAAVMNARVERLLAWTELRRVPLRKNSSWYGVAAALATIAIFSVTYTQLLTHVHTATEWLVR*
Ga0075030_1003378953	3300006162	Watersheds	AGEALDLAAALIKLSRLGPVEAPVDLTAALVHSPGAVMNARVERLIAWSDERLVSPPRFSPWSGVAAVLVAVAVFAITYSQLLAHVHTATEWLVR*
Ga0075030_1012863672	3300006162	Watersheds	DNLKKLLLRFVLFPGMSGLEMAWLEAIELAADDAAVSTPTEALDLAATLIKLSRLGPVEAPVDLSAALVHSPASIMNTRVERLIAWSQRRQAPPQGLALWYGVLSICTAVGLAAVTYSELLARVHEATEWLVR*
Ga0075030_1013405581	3300006162	Watersheds	RRRDNFKKLLLRFVAFPGMSALEATWIEATEMAADDAAVSSAGEALDLAAALIKLSKLPGERSVDLTAALLHRSAATVNARVERLLAWSDAPRVPPQKYSLWYRTTTALATVTVFAVSYGHLLVRVHTATEWLVR*
Ga0075527_101089121	3300006640	Arctic Peat Soil	ADDAAVSNAGEALDLAAALIKLSRLGPVEPPSDLTTALVHSPASVMNARVERLIAWRDDRLAPPAGFSSWYGLGAALATVTVFAVTYGQLLVHVHTATEWLVR*
Ga0066665_107911411	3300006796	Soil	HELAHVRRRDNLKKLVLRLVAFPGMAGLENAWLDATEMAADDAAVSSSGEALDLAAALIKLSRFAQLEPSTEIMMALVHSPAASVNARVERLIDWSEERRTPAQQYSAWYALCAGGVAVAAFGVTYSALLVRVHTATEWLVR*
Ga0116221_12347932	3300009523	Peatlands Soil	VRHRDNLKKLLLRFVVFPGMAGLEAEWLEATEMAADDAAVSNASEALDLAAALIKLSRLAPVEFGHVDPAILTTLVHSPAAVVNTRVERLIAWSDERLESPQRFSPWYGLGAATATVAVFAVTYSQLLVHVHTATEWLVR*
Ga0116225_10159041	3300009524	Peatlands Soil	AALNHEVAHVRHRDNLKKLLLRFVVFPGMAGLEAEWLEATEMAADDAAVSNASEALDLAAALIKLSRLAPVEFGHVDPAILTTLVHSPAAVVNTRVERLIAWSDERLESPQRFSPWYGLGAATATVAVFAVTYSQLLVHVHTATEWLVR*
Ga0116225_13915252	3300009524	Peatlands Soil	SNAGEALDLAAALIKLSRLGPVEAPVDLTAALVHSPASAMNARVERLITWSADRRVPPQKHSPWYGVGVALATVAVFAVTYSQLLVRVHTATEWLVR*
Ga0116111_10695381	3300009616	Peatland	AEMAADDAAVASAGEALDLAAALIKLSRLGPVETPVDLTAALVHSPAAIMNARVERLIAWSEDRLVLPRRFSPWYGMGAALATVAVFAVTYSRLLVHVHTATEWLVR*
Ga0116117_10333323	3300009635	Peatland	LIKLSRLGPVEPSVDLTAALVHSPVAVMNARIERLIAWSEDRLISPRRFARRYRLGCGLCAALATVAVFCVTYSQLLVRVHTATEWLVR*
Ga0116113_11616082	3300009638	Peatland	GEALDLAAALIKLSRLAPSELQVDLTAALVHSPAAVMNVRVERLLAWSEERRVPIRRGYSLWCAAGAALALVAAFAVTYGALLVRVHSATEWLVR*
Ga0116216_105821542	3300009698	Peatlands Soil	MAGLEAAWIEATEMAADDAAVSNAGEALDLAAALIKLSRLGPAQPSTDLTTALLHSPASIMNARVERLIAWSDDRLALPRRFPPWSGLGVALTTLALFALTYSRLLAHVHTATEWLVR*
Ga0116219_104390361	3300009824	Peatlands Soil	LDLAAALIKLSRLGPVEPSADLTAALVHSPASIMNARIERLIAWRDDRLALPEKFSPWYGLGAALATVAVFAVTYSQLLAQVHTATEWLVR*
Ga0116219_107913761	3300009824	Peatlands Soil	VTFPGMSGLEAAWLESTEMAADDAAVSNAGEALDLAAALIKLSRLGPIEPLADLTAALAHSPASVINARIERLIAWDDDHLVLPPRFSSWYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR*
Ga0116223_103396792	3300009839	Peatlands Soil	AAWLEATEMAADDAAVSNAGEALDLAAALIRLSRLGPVELGSVEPVADLTASLVHSPAAVMNARIERLIAWSDDRIALPPRFSPWYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR*
Ga0126372_131029051	3300010360	Tropical Forest Soil	GLEHAWLEATEMAADDAAVVNASEALDLASALIKLSRIGAEPSVDLTAALVYSPGAVMNARVERLLAWNEARCIPLRRTSSWYGLAAALATIAIFSVTYTQLLTRVHTATEWLVR*
Ga0126378_119934292	3300010361	Tropical Forest Soil	ESLLSYGELRTALNHEVAHIRRRDNLKKLCLRLVSFPGITGLEEAWLEATEMAADDAAVSTADEALDLAAALLKLSRVGPVEPAVDLTAALVHSRAALMNARVERLIGWNESRRIPTRKHSPWYGLAAAAGSLAVFAITYSHLLARIHTATEWLVR*
Ga0126379_117837451	3300010366	Tropical Forest Soil	ITGLEEAWLEATEMAADDAAVSTADEALDLAAALLKLSRVGPVEPAVDLTAALVHSRAALMNARVERLIGWNESRRIPTRKHSPWYGLAAAAGSLAVFAITYSHLLARIHTATEWLVR*
Ga0136449_1004406392	3300010379	Peatlands Soil	TALNHEVAHVRRRDNLRKLLMRFVAFPGMRDLEAAWFEATEMAADDAAVSNAGEALDLAAALIKLSRLGPVEPVDLTAALVHSPASVMNARVERLIAWNEERRVPPAKYSPWYGLSAALATVAAFAVTYSQLLVHVHTATEWLVR*
Ga0137776_16534391	3300010937	Sediment	KKLLLRFVAFPGMSRLEAAWLEATEMAADDAAVSNAGEALDLAAALIKLSSLGPVEPPADLTAALVHSPAAVMNARIERLIAWSDDRLAPPQEFSLRYGVVATLATVAVFAVTYGQLLTHVHTATEWLVR*
Ga0137391_104581021	3300011270	Vadose Zone Soil	LKKLLLRFVPFPGMAGLETAWLESTEMAADDAAVSSVGEALDLAAALIKLSRLRTSERPAELTAALMHSPAGLMNARVERLIAWDERRKAQVPRYSPWYGLTAGLTMVAGFAVAYGQLLVRVHMATEWLVR*
Ga0137381_103655242	3300012207	Vadose Zone Soil	AADDAAVFSTSDALDLAAALIKLSSLPPYEPPADLTAALVQGSASVMNARVERLIAWTDERSVPPQKFSSWFGVGAAVATVAVFAISYGSLLERVHTATEWLVRSLF*
Ga0137378_104121221	3300012210	Vadose Zone Soil	TEMAADDAAVSNAGEALDLAAALLKLSRLTPVDLAVELTTALVHSPYSVMNARVERLIAWSDERLVPLQRFSPWYGFGALLAMLAVFAVTYSQLLVRVHSATEWLVR*
Ga0137378_105522881	3300012210	Vadose Zone Soil	MTADDAAVSNARDALDLATALIKLSRLTPVAPPADLTAALVHSPASLMNARVERLINWTDEYLVPFRKFSPWYGFGAFLATFAVFAVIYSQLLAHVHTATEWLVH*
Ga0137398_106274632	3300012683	Vadose Zone Soil	AFPGMQKLETAWLEATEMAADDAAVSNAEEALDLASALIKLSRLGPVQPLAALTTALVHSPLHTVNARIERLIHWPTNQKVSSPNYSGYALSATLAVVATLAMSYSQLLVRVHSATELLLR*
Ga0137395_104704721	3300012917	Vadose Zone Soil	DDAAVSSVAEALDLAAALIKLSRMGIPEPTAELTAALMHSPVGLMNARVERLIAWNEERKAPRRRYSLWYGLSAGLAMVAGFAVTYAQLLVRVHTATEWLVR*
Ga0137359_113297941	3300012923	Vadose Zone Soil	AGEALDLASALIKLSRLGPVEPAVDLTAALVHSPTSVMNARIERLIAWSAERPISRRRYSPWYGLGVVVATVAVFAVTYGQLLLRLHTATEWLVR*
Ga0137407_114359711	3300012930	Vadose Zone Soil	ATEMAADDGAVSSCEEALDLAAALIKLSRLSPLEPQAELTTSLLHRPLSTVNARVERLIDWSEDRRVPAEKYPVWYALAAGVAMVAAGGITYGHLLVRVHAATEWLIR*
Ga0181531_108623932	3300014169	Bog	RRWDNLKKLLLRCVAFPWMSGLEAAWLEATEMAADDAAVSSPSEALDLAAALIKLSRLATVEPHLDLTCGLVPRPASNLNARVERLLAWSEARHFRTKSFSLWYGLAAALGTAAICAVTYSQLLVHVHTATEWLVR*
Ga0182024_101240754	3300014501	Permafrost	IKLARLGPVEAPVDLTVALMASPGAVMNARVERLIAWSDDRPTAHGRISLRYAFGAAAATVAVFALTYVQLLVHVHTATEWLVR*
Ga0187814_102185122	3300017932	Freshwater Sediment	RDNFKKLLLRFVAFPGMSRLEATWLEATEMAADDAAVSTAGEALDLAAALIKLSQLPAEPPVDLTAALLHRAASTVNARVERLVAWSESRPFPRSKYSPWYGATAALATITMFAVTYSELLVHVHTATEWLVR
Ga0187817_104743292	3300017955	Freshwater Sediment	AVSTAGEALDLAAALIKLSQLPAEPPVDLTAALLHSAASTVNARVERLVAWSDACRVPPQKFSPWYGATAALATISMFAVTYSELLVHVHTATEWLVR
Ga0187779_100208531	3300017959	Tropical Peatland	AWLEAIEMAADDDAVSDAHEALDLAAALIKLARLGPPETPLDLSAALVHNPVSAVNARVERLIAWSAERRETSRKRSPLYSLAAALVTLSVLALTYSQLLVQVHAATEWLVR
Ga0187804_103275331	3300018006	Freshwater Sediment	RLEATWLEATEMAADDAAVSSADQALDLAAALIKLSKLGPAEPPVDLTAALLHSPAATMNARVERLVAWSDARRVPPQKHSPWYGATAALATITMFAVTYSELLVHVHTATEWLVR
Ga0187863_103606802	3300018034	Peatland	TEMAADDAAVSNASEALDLAAALIKLSRLESVEWGYVHPAIDLTTALVHGSAAVMSARVERLIAWSGDRLAPSKTFAPWYGLGAAVATVAVFAVTYSQLLARVHTATEWLVR
Ga0187883_103707781	3300018037	Peatland	RRDNLKKLLLRFVAFPGMSGLEAAWLEATEMAADDAAVANVSEALDLAAALIKLSRLGPVEPSVDLTAALVHSPVAVMNARIERLIAWSEDRLISPRRFARRYRLGFGLCAALATVAVFCVTYSQLLVRVHTATEWLVR
Ga0187871_101397543	3300018042	Peatland	AALIKLSRLGPVEPSVDLTAALVHSPVAVMNARIERLIAWSEDRLISPRRFARRYRLGCGLCAALATVAVFCVTYSQLLVRVHTATEWLVR
Ga0187851_100504684	3300018046	Peatland	ALDLAAALIKLSRLNPAELGAVDPAIAMTAALVHSTAAVMNARVQRLIAWSDDRRASSENFSPLYGLAAAAATLAIFVVTYTQLLVHLHTATEWLVR
Ga0187784_100660231	3300018062	Tropical Peatland	SSAVEALDLAAALIKLSRLGSVEPPADLMMALVHRPASVMNARIERLIAWSETRKVQAQAFSYWYGLAAVLSTVAIFAITYSQLLVHVHTATEWLVR
Ga0181512_10552461	3300019270	Peatland	ANVSEALDLAAALIKLSRLGPVEPSVDLTAALVHSPVAVMNARIERLIAWSEDRLISPRRFARRYRLGCGLCAALATVAVFCVTYSQLLVRVHTATEWLVR
Ga0210399_101319714	3300020581	Soil	ADDAAVSNAGEALDLAAALIKLSRLGPIDAPVDLTAALIHNPASVMNARIERLIAWSDARLVSPHRFSPWYALGAALATVAVFTVMYSQMLVQVHTATEWLVR
Ga0210405_103611621	3300021171	Soil	LKKLLLRLVGFPGMAGLEAAWLEATELAADDAAVFNAGEALDLAAALIKLSRMAPAEVQIDLTAALVHSPAAVMNVRVERLIAWNEERRIPTRRGYRGYSLWCTAGAALALVAVFAVTYSALLVRVHTATEWLVR
Ga0210405_105537412	3300021171	Soil	KLSRLGPVEPAADLTTALVHSPASVMNARIERLIAWSEDRLALPQRFSPWYSVSTVLATIAILAVTYTQLLAQVHTAMEWLVR
Ga0210388_117765891	3300021181	Soil	DDAAVFNAGEALDLAAALIKLSRMAPAEVQIDLTAALVHSPAAVMNVRVERLIAWNEERRIPTRRGYRGYSLWCTAGAALALVAVFAVTYSALLVRVHTATEWLVR
Ga0210385_104233801	3300021402	Soil	NLRKLLLRCVAFPGMAGLEAAWLEATEMTADDAAVSSAGEALDLAAALIKLSRLGPAQPSTDLTTALLHSPASIMNARVERLIAWSDDRLALPGRFSPWPGLGVALATLALFILTYGQLLAHVHTATEWLVR
Ga0210397_103946931	3300021403	Soil	TAWLEATEMAADDAAVSNAGDALDLAAALIKLSRLGPVEAPVDLTAALVHSPASSMNARVARLIAWCDERRVPARKHSPWLGVGAAVTTVLVCAVTYSQLLIRVHTATEWLVR
Ga0210397_114790261	3300021403	Soil	KLLLRCVAFPGMAGLEAAWLEATEMTADDAAVSSAGEALDLAAALIKLSRLGPAQPSTDLTTALLHSPASIMNARVERLIAWSDDRLALPGRFSPWPGLGVALATLALFILTYGQLLAHVHTATEWLVR
Ga0210383_100495871	3300021407	Soil	DLAAALIKLSRLSPVEPLADLTAALMHSPVSVMNARVARLIAWSDQRLVSAQRFSLGYALSATIAATAVFAGTYSQLLVHVHTATEWLVR
Ga0210383_113468712	3300021407	Soil	VAFPRMARLETAWLEATEMAADDAAVSNAAEALDLAAALIKLSRLGPVHSPTDLTTALVHSPASVMNARVERLIAWSDERLVSPRRFSPWYGLCAASATVAVFAVTYGQLLVHIHTATEWLVR
Ga0210394_108472202	3300021420	Soil	AVSSAGEALDLAAALIKLSRFGPAEAGADLTAALVHRPVSAMNARVTRLIAWTDDRLASHYTLSPWYGIGAVLAVVAVFAVTYSQLLVRVHTATEWLVR
Ga0210384_103414901	3300021432	Soil	EALDLAAALIKLSLLGPVEAPVDLTAALIHSPASVMSARIERLIAWSDHSVVSPHRFSPWYALGAALATVAVFTVMYSQMLVQVHTATEWLVR
Ga0210390_113356452	3300021474	Soil	LDLATALIKLSRLGPVEADSAEATDLTAALVRSPASVMSARIARLIAWSEDRLVLSQGFSDWHRLGYGLGAALAIVAGFAVTYSQLLVRVHTATEWLVR
Ga0210398_100580251	3300021477	Soil	AAALIKLSRLAPSEPPADLTAALVHSLPCVMNARVERLIAWSAERLVSTRRFSPWYGLGAAAATAALFAVTYSQLLVRVHTATEWLVR
Ga0210402_118666111	3300021478	Soil	RRDNLKKLLLRLIAFPGMSGLEAAWLQAIEMAADDAAVFSASEALDLAAALIKLSRLSPFEARVDLTAALVHSPVAVMNARVERLMAWSEERPFSSSPLGYSPWYAVAALVTMVAVLAVTYSGLLVRVHTATEWLVK
Ga0210410_105501281	3300021479	Soil	MAADDAAVSNAGEALDLAAALIKLSRLGPIDAPVDLTAALIHSPASVMSARIERLIAWSDVRLAPPQRSSPWFALGAALATVAVFAVTYTQLLVQVHTATEWLVR
Ga0210410_112578901	3300021479	Soil	DDAAVSNAGEALDLAAALIKLSLLGPVEAPVDLTAALIHSPASVMSARIERLIAWSDHSVVSPHRFSPWYALGAALATVAVFTVMYSQMLVQVHTATEWLVR
Ga0210409_113339141	3300021559	Soil	ADDAAVSNAGDALDLAAALIKLSRLGPVEAPVDLTAALVHSPASAMNARVERLIAWCEERRVPTQTRSAWYGVGAAMATVAVFAFTYSQLLVRVHTATEWLVR
Ga0212123_105580181	3300022557	Iron-Sulfur Acid Spring	DLAAALIKLSRLAPAGVQIDLTAALVHSPAAVMNVRVERLIAWNEERRIPTRRGYRGYSLWCTAGAALALVAAFAVTYSALLVRVHTATEWLVR
Ga0242673_11356041	3300022716	Soil	AVSNAGEALDLASALVKLSRLQPVEWATVDPTIGLTAALVHGSAAVVSARVERLIAWSSDCLAPPKTFSPWYGLGAAAATVAVFLVTYGHLLVQVHMATEWLVR
Ga0242657_11233331	3300022722	Soil	FVTFPGMSGLEAAWLEATEMTADDAAVSNAGEALDLAAALIKLSRLGPADAPVDLTAALIHSPASVMNARIERLIAWSDDRLALPHRFSPWYGLGAALATVAVFAVTYGQLLAQVHTATEWLVR
Ga0208690_10071203	3300025434	Peatland	AAVANVSEALDLAAALIKLSRLGPVEPSVDLTAALVHSPVAVMNARIERLIAWSEDRLISPRRFARRYRLGCGLCAALATVAVFCVTYSQLLVRVHTATEWLVR
Ga0207700_114176501	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	DNLKKLFLRFVPFPGMRGLELAWLQATEMSADDAAVTSQAEALDLAAALIKLSRVSPAEPPADLSAALVHTPGSMMNARVERLISWKETRRAASHISPRYGLAAGLATITVFTFTYSHLLLKVHTATEWLMH
Ga0179587_103379911	3300026557	Vadose Zone Soil	RDNLKTLLLRFVAFPGMSGLETAWLEATERAADDDAVSSAGDALDLAAALIKLSRLGPVEAPVDFTAALVHSPASAMNARVERLITWCEGRRVPAQTRSAWYGVGATLATVAVFAFTYSQLLVRVHMATEWLVR
Ga0209222_10421221	3300027559	Forest Soil	KKLLLRLVEFPAMAGLEAAWGEATELAADDAAVFNAREALDLAAALIKLSRLAPAEAQVDLTTALVHSPVAMMNVRVERLIAWNDERRIPTRPGYSSWGAAGVALALVAGFVPAYSALLVRVHTVTEWLVR
Ga0208044_11762282	3300027625	Peatlands Soil	SNAGEALDLAAALIKLSRLGPVEAPVDLTAALVHSPASAMNARVERLITWSADRRVPPQKHSPWYGVGVALATVAVFAVTYSQLLVRVHTATEWLVR
Ga0208827_11798501	3300027641	Peatlands Soil	LQTALNHEFAHVRRRDNLKKLLLRFVTFPGMTGLEAAWLEATEMAADDAAVSNAGEALDLAAALIRLSRLGPVELGSVEPVADLTASLVHSPAAVMNARIERLIAWSDERLESPQRFSPWYGLGAATATVAVFAVTYSQLLVHVHTATEWLVR
Ga0209773_103674401	3300027829	Bog Forest Soil	AALIKLSRLVPSEVQVDLTAALVHSPAAVMNVRVERLLAWNEERRVPIRRGYSLWCAAGAALAVVAAFAVTYSALLVRVHSATEWLVR
Ga0209580_104357751	3300027842	Surface Soil	EALDLASALIKLSRLSPVEPPADLTAALVHSPAKVMNARVERLLAWTGDRRVPGRRHSPWYALAATIATVALFAVTYSPLLAHVHTATEWLVR
Ga0209580_106456211	3300027842	Surface Soil	DAAVSNAGDALDLAAALIKLSRLGPVEPPADLTAALVHSGASVMNARVERLIAWCDERRVPPQQHSPWYGVGAALATVAVFAVTYSQLLVHVHTATEWLVR
Ga0209517_105734542	3300027854	Peatlands Soil	ALDLAAALIKLSRLGPIEPLADLTAALAHSPASVINARIERLIAWDDDHLVLPPRFSSWYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR
Ga0209624_100545762	3300027895	Forest Soil	EATEFAADDAAVFNTREALDLAAALIKLSRLAPAEAQVDLTAALVHSPVAVMNVRVERLIAWNEERRVPTRRGYSSWCAAGCAAGVALALGSGFALTYSALLVRVHTVTEWLVR
Ga0209624_100777532	3300027895	Forest Soil	NAGEALDLAAALIKLSRLAPSEPPADLTAALVHSLPCVMNARVERLIAWSDERLVSTRRFSPWYGLGAAAATAALFAVTYSQLLVRVHTATEWLVR
Ga0209067_107840622	3300027898	Watersheds	SNAGEALDLAAALIKLSKLGPAEPPVDLTAALMHSPASTMNARVERLVAWSDSRLVPPRRYSPWYGTTTALATVAVFAVTYSQLLVHVHTATEWLVR
Ga0209488_109811001	3300027903	Vadose Zone Soil	RFVAFPGMSGLENAWLEATEMAADDAAVSSAGDALDLAAALIKLSRLGPVEAPVDFTAALVHSPASAMNARVERLITWHEERLVPARTRSSWYGVGAAMATVAVFAFTYSQLLVRVHTATEWLVR
Ga0209006_107776742	3300027908	Forest Soil	LAAALIKLSRLSRVEPLADLTAALMHSPVSVMNARVARLIAWSDQRLVSAQRFSLGYALSATIAATAVFAGTYSQLLVHVHTATEWLVR
Ga0302219_103878341	3300028747	Palsa	LDLAAALIKLSRLAPAEVQVDLTAALVHSPVAVMNVRVERLIAWSEERRVPTGRGYSPWCAAGAALVLVAGFAVTYGALLARVHTATEWLVR
Ga0302224_104348632	3300028759	Palsa	DDAAVSSPSEALDLAAALIKLSRLATVETHLDLTCALVPRPASNLNARVERLLSWSEARQVRTKSFSLWYGLAAALGTAAICAVTYSQLLVHVHTATEWLVR
Ga0307504_104262321	3300028792	Soil	FPGMNGLETAWLEATEMAADDAAVSTVGEALDLAAALIKLSRLSPVLPPAELTTALLHSPAAAMNARVERLIGWSEERLVPAGKHSPWYGLGAAVAMVAVFAVTYSQLLVRVHTATEWLV
Ga0302222_102483811	3300028798	Palsa	RCVAFPRMSGLETAWLEATEMAADDAAVSSPSEALDLAAALIKLSRLATVETHLDLTCALVPRPASNLNARVERLLSWSEARQVRTKSFSLWYGLAAALGTAAICAVTYSQLLVHVHTATEWLVR
Ga0311368_102521712	3300029882	Palsa	AAALIKLSRLGPVEVDSAEAAADLTAALVRSPASVMNARIERLIAWSEERLALAQGFCSWRGLGCGLGAALAMVGGFAVIYSQLLVRVHTATEWLVR
Ga0302182_102325371	3300030054	Palsa	SGAAESLLAAGELQTALNHELAHVRRWDNLKKLLLRCVAFPRMSGLETAWLEATEMAADDAAVSSPSEALDLAAALIKLSRLATVETHLDLTCALVPRPASNLNARVERLLSWSEARQVRTKSFSLWYGLAAALGTAAICAVTYSQLLVHVHTATEWLVR
Ga0310037_102265721	3300030494	Peatlands Soil	GEALDLAAALIKLSRLGPVEAPVDLTAALVHSPASAMNARVERLITWSADRRVPPQKHSPWYGVGVALATVAVFAVTYSQLLVRVHTATEWLVR
Ga0316363_102119881	3300030659	Peatlands Soil	EELDLAAALIRLSRLGPVELGSVEPVADLTASLVHSPAAVMNARIERLIAWSDDRIALPPRFSPWYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR
Ga0307482_12223641	3300030730	Hardwood Forest Soil	SALEVTWLEATEMAADDAAVSSAAEALDLAAALIKLSKLGPAQPPVDLTAALLHSSASIMNARVERLVAWSDRRLVPSRKYSPWYGTTAALATVAVFAVTYSQLLVHVHTATEWLVR
Ga0265753_10558842	3300030862	Soil	VAFPGMKNLEGAWLEATEMAAVDAAVSNACEALDLAEALIKLSLLTPPEPSAVLTAALIHSPTSVMNARIERLIAWSDERLVSLPRFSPRYGLGAALATVALFVMTYSQLLAGVHTATEWLVR
Ga0265770_11162381	3300030878	Soil	GLEAAWLEGTELAADDAAVFNAGQALDLAAALIKLSRLAPFEAQVDLTAALVHSPAAVMNVRVERLIAWSEDRRVPTRRGYPLWCGAGAALALVAAFAVTYGALLVRVHSATEWLVR
Ga0308178_11158001	3300030990	Soil	ERELKPALRHELVHVRRRDNLKKLALRVVQFPGMSGLEAAWLEATEMAADDGAVSNCEQALDLAAALIKLSRLFPLEPQAELTTSLVHRPLSTVNARVARLIDWSEDRRVPAQKYPVWYALAAAVAMVAACGITYGHLLVRVHAATEWLIQ
Ga0265760_102279662	3300031090	Soil	NLEGTWLEATEMAADDAAVSNACEALDLAEALIKLSRLTPPEPSAVLTAALIHSPTSVMNARIERLIAWSDERLVSSSRFSPRYGLGAALATVAAFAMTYSQLLASVHTATEWLVR
Ga0170824_1169059842	3300031231	Forest Soil	LKKLLLQFVSFPGMSGLEVAWLEATELAADDAAVSNAAEALDLAAALIKLSRLGPVELPADLTAALVHTGLVHSPASVMNARVARLIVWSDDRRVSSQKFSPWYGLGATLASVAVFALTYSQLLVRVHTATEWLVR
Ga0302325_113808371	3300031234	Palsa	VRRRDNLKKLLLRLVGFPGMAALEAAWLEVTELAADDAAVFNAGEALDLAAALIKLSRLAPFEAQVDLTAALVHSPAAVMNVRVERLLAWNEERRVPTRRGYSLWCAAGGGLALVAAFAVTYGALLVRVHSATEWLVR
Ga0302325_130113392	3300031234	Palsa	ETAWLEATEMAADDAAVSTPTEALDLAAALIKLSRLGPVEPQVDLTMSLVPRPASNLNARVERLLSWSDARQVRTKSFSLLYGLAAVLGTAAICAVTYSQLLVHVHTATEWFVR
Ga0302324_1016539281	3300031236	Palsa	LQTALNHELAHVRRWDNLKKLLLRCVAFPWMSGLETAWLEATEMAADDAAVSTPTEALDLAAALIKLSRLGPVEPQVDLTMSLVPRPASNLNARVERLLSWSDARQVRTKSFSLLYGLAAVLGTAAICAVTYSQLLVHVHTATEWFVR
Ga0265339_100418431	3300031249	Rhizosphere	VAFPGMSGLETAWLEATEMAADDAAVSNAGEALDLAAALIKLSRLGPVEPPSDLTTALVHSPASVMNARVERLIAWSEDRRASQRRSSPWYGLGAALATVAVFALTYSQLLVHVHTATEWLVR
Ga0170820_103849722	3300031446	Forest Soil	SDAAEALDLAAALIKLARLGPVEPSVDLTAALVHSPGSVMNARVARLIVWSDDRRVSSQKFSPWYGLGATLASVAVFALTYSQLLVRVHTATEWLVR
Ga0170818_1077766401	3300031474	Forest Soil	RRDNLKKLMLRFVSFPGMSGLEVAWLEATELAADDAAVSNAAEALDLAAALIKLSRLGPVELPADLTAALVHSPASIMNARVARLIAWSDDRRVSSQKFSPWYGLGATLASVAVFALTYSQLLVRVHTATEWLVR
Ga0307473_113459121	3300031820	Hardwood Forest Soil	VAFPGMQGLETAWLESTEMAADDAAVSNVVEALDLAAALIKLSRLGPAEPPAELTTALVHSPVSSMNARIERLIAWPDERRVPTQKCSSWYGLGVTLAVVAGFAVTYSELLVRVHTATEWLVR
Ga0311301_113761072	3300032160	Peatlands Soil	NAGEALDLAAALIKLSRLGPIEPLADLTAALAHSPASVINARIERLIAWDDDHLVLPPRFSSWYGLGAALATVAVFAVTYSQLLVQVHTATEWLVR
Ga0335079_122159421	3300032783	Soil	LKKLLLHFVPFPGMSRLETAWLEATEMAADDAAVSNAGEALDLAAALIKLSRLGPVEAPADLTAALVHNPASAMNARIERLIAWSNDRLASPRRFSLWCGLGATLAAVAGCGVTYSQLLAHIHTATEWLVR
Ga0335079_122537642	3300032783	Soil	MRFVAFPGMGGLEAAWLEATEMAADDAAVSNTGEALDLAAALIKLSRLSAVDSSSDLTAALIHTPASLMNARVERLISWSEDRRILSSTLSLRYGAALTLVTFVVFFETYGHLIAKVHTATEWLMR
Ga0335078_103604422	3300032805	Soil	MAADDAAVSNAGEALDLAAALIKLSRLGSNEAVSDLTAALVQTSASIMNARVERLIRWTDERREAPRQLSIGYGLGAAVIIVTFFAITYLQLLSELHTATEWLMR
Ga0335080_100672083	3300032828	Soil	AAALIKLSRLGPGQAVELTASLVHSPAALMNTRVNRLVSWSDDRRVPLERPSPSYGVCAAAATIALFAITYTQLLMRVHTATEWLVR
Ga0335081_108193322	3300032892	Soil	LDLAAALIKLSRLGPGQAVELTASLVHSPAALMNTRVNRLVSWSDDRRVPLERPSPWYGVCAAAATIALFAITYTQLLIRVHTATEWLVR
Ga0335081_117175542	3300032892	Soil	RLVPFPAMRGLEAAWLEAIEMAADDAAVSDAGEALDLAAALIKLARLGSPETPLDLIAALVHNPVSAVNARVERLIAWSAERREAPRKRSPLYPQVAALVTLSVLALTYSQLLVQVHAATEWFVR
Ga0335069_103214361	3300032893	Soil	ELQTALNHEVAHIRRQDNLKKLCLRFVAFPGMDGLEDAWLEATEMAADDAAVMSSSEALDLAAALIKLSRLGPGQAVELTASLVHSPAALMNTRVNRLVSWSDDRRVPLERPSPWYGVCAAAATIALFAITYTQLLIRVHTATEWLVR
Ga0335074_102485072	3300032895	Soil	MAADDAAVSNAGEALDLAAALIKLSRLGSNEAVSDLTAALVQTSASIMNARVERLIRWTDERREAPRQLSIGYGLGAAVIIVTFFAFTYLQLLSELHTATEWLMR
Ga0335076_100149691	3300032955	Soil	AEALLTSGELQTALNHEVAHIRRQDNLKKLCLRFVAFPGMDGLEDAWLEATEMAADDAAVMSSSEALDLAAALIKLSRLGPGQAVELTASLVHSPAALMNTRVNRLVSWSDDRRVPLERPSPWYGVCAAAATIALFAITYTQLLIRVHTATEWLVR
Ga0316212_10708851	3300033547	Roots	ASEALDLASALIKLSRLEPAEWATVDPTIGLTAALVHGSAAVISARVERLIAWSGDALASPKTFSTWYGLGAAAATVAVFVVTYGQLLVQVHTATEWLVR
Ga0370484_0137303_6_323	3300034125	Untreated Peat Soil	MAADDAAVSNASEALDLAAALIKLSRLRPTEPPVDLTAALVHGPASITSARVERLIAWSDERLVSPRSFSPWYGLAAVLATVAVFALTYSQLLVRVHIATEWLVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066721

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences