Metagenome / Metatranscriptome Family F066680

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066680
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	84 residues
Representative Sequence	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYT
Number of Associated Samples	116
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.87 %
% of genes near scaffold ends (potentially truncated)	22.22 %
% of genes from short scaffolds (< 2000 bps)	79.37 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.206 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (30.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.587 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.53% β-sheet: 3.53% Coil/Unstructured: 52.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01192	RNA_pol_Rpb6	11.90
PF09084	NMT1	8.73
PF01327	Pep_deformylase	4.76
PF13379	NMT1_2	3.97
PF08378	NERD	3.17
PF04055	Radical_SAM	1.59
PF03372	Exo_endo_phos	1.59
PF01070	FMN_dh	1.59
PF07040	DUF1326	0.79
PF13343	SBP_bac_6	0.79
PF04545	Sigma70_r4	0.79
PF12974	Phosphonate-bd	0.79
PF03972	MmgE_PrpD	0.79
PF01799	Fer2_2	0.79
PF00102	Y_phosphatase	0.79
PF03279	Lip_A_acyltrans	0.79
PF05706	CDKN3	0.79
PF05977	MFS_3	0.79
PF02926	THUMP	0.79
PF03401	TctC	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	11.90
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	8.73
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	8.73
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	4.76
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.59
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.59
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	0.79
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.79
COG2453	Protein-tyrosine phosphatase	Signal transduction mechanisms [T]	0.79
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.79
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.79
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	0.79
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.79
COG5599	Protein tyrosine phosphatase	Signal transduction mechanisms [T]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.27 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	90.48 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	90.48 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	84.92 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	84.92 %
Unclassified	root	N/A	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_2738311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	862	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101928511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3420	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101929090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300000559\|F14TC_100242692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1672	Open in IMG/M
3300002886\|JGI25612J43240_1049463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300002908\|JGI25382J43887_10043992	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2427	Open in IMG/M
3300003319\|soilL2_10017570	All Organisms → cellular organisms → Bacteria	4323	Open in IMG/M
3300003324\|soilH2_10165897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1312	Open in IMG/M
3300003324\|soilH2_10230146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1141	Open in IMG/M
3300004114\|Ga0062593_102233536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	614	Open in IMG/M
3300004463\|Ga0063356_101879271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	902	Open in IMG/M
3300005166\|Ga0066674_10016645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3125	Open in IMG/M
3300005179\|Ga0066684_10045608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2487	Open in IMG/M
3300005179\|Ga0066684_10162354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1425	Open in IMG/M
3300005276\|Ga0065717_1000744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300005277\|Ga0065716_1001172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300005290\|Ga0065712_10004030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3987	Open in IMG/M
3300005294\|Ga0065705_10262960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1155	Open in IMG/M
3300005334\|Ga0068869_100439211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1080	Open in IMG/M
3300005340\|Ga0070689_100291658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1356	Open in IMG/M
3300005355\|Ga0070671_100451078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1103	Open in IMG/M
3300005458\|Ga0070681_10438919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1217	Open in IMG/M
3300005529\|Ga0070741_10000131	All Organisms → cellular organisms → Bacteria	291607	Open in IMG/M
3300005530\|Ga0070679_101222765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300005536\|Ga0070697_100922183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300005547\|Ga0070693_100728723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300005556\|Ga0066707_10067230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2127	Open in IMG/M
3300005569\|Ga0066705_10152603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1420	Open in IMG/M
3300005719\|Ga0068861_101107901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M
3300005937\|Ga0081455_11008988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300006755\|Ga0079222_10064105	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300006755\|Ga0079222_10585303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	847	Open in IMG/M
3300006794\|Ga0066658_10241554	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	964	Open in IMG/M
3300006797\|Ga0066659_10785009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	786	Open in IMG/M
3300006800\|Ga0066660_10291624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1298	Open in IMG/M
3300006804\|Ga0079221_10062156	Not Available	1714	Open in IMG/M
3300006852\|Ga0075433_10492566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1079	Open in IMG/M
3300006853\|Ga0075420_100102275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2528	Open in IMG/M
3300006871\|Ga0075434_100548923	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1175	Open in IMG/M
3300006903\|Ga0075426_10021312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4635	Open in IMG/M
3300006904\|Ga0075424_100181622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2232	Open in IMG/M
3300006904\|Ga0075424_100289945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1741	Open in IMG/M
3300006914\|Ga0075436_100387688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1011	Open in IMG/M
3300007004\|Ga0079218_11298158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	766	Open in IMG/M
3300007076\|Ga0075435_100406004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1172	Open in IMG/M
3300007076\|Ga0075435_101418309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300009053\|Ga0105095_10543642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300009087\|Ga0105107_10063828	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300009090\|Ga0099827_10506143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1038	Open in IMG/M
3300009092\|Ga0105250_10530389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300009094\|Ga0111539_11407355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300009147\|Ga0114129_10361831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1919	Open in IMG/M
3300009162\|Ga0075423_10772665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300009545\|Ga0105237_10475285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1256	Open in IMG/M
3300009553\|Ga0105249_10737395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1047	Open in IMG/M
3300009810\|Ga0105088_1058580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300010154\|Ga0127503_10121067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300010304\|Ga0134088_10008231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4413	Open in IMG/M
3300010397\|Ga0134124_11174646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300010401\|Ga0134121_11479304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300011119\|Ga0105246_10115266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1981	Open in IMG/M
3300012203\|Ga0137399_10216176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1562	Open in IMG/M
3300012205\|Ga0137362_11024017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300012208\|Ga0137376_10011358	All Organisms → cellular organisms → Bacteria → Proteobacteria	6396	Open in IMG/M
3300012349\|Ga0137387_10396316	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1001	Open in IMG/M
3300012362\|Ga0137361_11834095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300012481\|Ga0157320_1025174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300012484\|Ga0157333_1011366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	668	Open in IMG/M
3300012493\|Ga0157355_1007586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300012505\|Ga0157339_1008695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	882	Open in IMG/M
3300012685\|Ga0137397_10052128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2938	Open in IMG/M
3300012897\|Ga0157285_10161287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300012944\|Ga0137410_10923101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300012958\|Ga0164299_10502495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
3300012975\|Ga0134110_10004032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5383	Open in IMG/M
3300013308\|Ga0157375_12496149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300014150\|Ga0134081_10022018	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1799	Open in IMG/M
3300014745\|Ga0157377_10723939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	725	Open in IMG/M
3300014965\|Ga0120193_10058421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300015264\|Ga0137403_10731962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	848	Open in IMG/M
3300015371\|Ga0132258_11223091	All Organisms → cellular organisms → Bacteria	1899	Open in IMG/M
3300015372\|Ga0132256_101741073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300015373\|Ga0132257_100370549	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300015374\|Ga0132255_102094919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	862	Open in IMG/M
3300017659\|Ga0134083_10043779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1670	Open in IMG/M
3300017792\|Ga0163161_11714851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300017792\|Ga0163161_12077041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300018067\|Ga0184611_1141077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300018072\|Ga0184635_10122407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1034	Open in IMG/M
3300018073\|Ga0184624_10003069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5086	Open in IMG/M
3300018431\|Ga0066655_10120413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1507	Open in IMG/M
3300018431\|Ga0066655_10645328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300018482\|Ga0066669_10004031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6515	Open in IMG/M
3300019362\|Ga0173479_10263135	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	766	Open in IMG/M
3300021344\|Ga0193719_10388027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	577	Open in IMG/M
3300022563\|Ga0212128_10111480	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300025893\|Ga0207682_10089313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1334	Open in IMG/M
3300025903\|Ga0207680_10439634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300025912\|Ga0207707_10027837	All Organisms → cellular organisms → Bacteria	4941	Open in IMG/M
3300025921\|Ga0207652_10372651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1289	Open in IMG/M
3300025934\|Ga0207686_11303398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300025935\|Ga0207709_11802653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300025936\|Ga0207670_10375475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1131	Open in IMG/M
3300025938\|Ga0207704_10407840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1074	Open in IMG/M
3300025972\|Ga0207668_10473578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1073	Open in IMG/M
3300026088\|Ga0207641_10412667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1299	Open in IMG/M
3300026142\|Ga0207698_10412701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1293	Open in IMG/M
3300026285\|Ga0209438_1040120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1549	Open in IMG/M
3300026315\|Ga0209686_1035000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1909	Open in IMG/M
3300026325\|Ga0209152_10064726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300026330\|Ga0209473_1113729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1125	Open in IMG/M
3300026342\|Ga0209057_1056547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1805	Open in IMG/M
3300026552\|Ga0209577_10027837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4940	Open in IMG/M
3300027277\|Ga0209846_1064680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300027765\|Ga0209073_10017647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2056	Open in IMG/M
3300027787\|Ga0209074_10182890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300027821\|Ga0209811_10010808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2935	Open in IMG/M
3300027907\|Ga0207428_10057500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3087	Open in IMG/M
3300027907\|Ga0207428_10183192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1581	Open in IMG/M
3300028802\|Ga0307503_10387319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300031716\|Ga0310813_10162593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1805	Open in IMG/M
3300031720\|Ga0307469_11248741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300032144\|Ga0315910_10052047	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300033412\|Ga0310810_10002095	All Organisms → cellular organisms → Bacteria	21218	Open in IMG/M
3300033412\|Ga0310810_10025005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7253	Open in IMG/M
3300034150\|Ga0364933_093090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.08%
Host-Associated	Host-Associated	34.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.52%
Plants	Host-Associated → Plants	34.92%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.49%
Freshwater	Environmental → Aquatic → Freshwater	2.38%
Sediment	Environmental → Aquatic → Sediment	2.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.73%
Loam	Environmental → Terrestrial → Soil → Loam	7.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Sand	Environmental → Terrestrial → Soil → Sand	1.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.59%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.38%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.79%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.79%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0869.00001590	2162886013	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYT
INPhiseqgaiiFebDRAFT_1019285113	3300000364	Soil	MGTLPNXREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
INPhiseqgaiiFebDRAFT_1019290901	3300000364	Soil	MGTLPNKREXLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
F14TC_1002426923	3300000559	Soil	MATLPNKREVLQSILDQQDDLWIVMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPISWFLNQELEKIESAVLDAIEHAESGYKYI*
JGI25612J43240_10494631	3300002886	Grasslands Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCIFQNPGRWKEARVEIPMSWFLNQDLXKIETAVLDAIERAESGYKYT*
JGI25382J43887_100439922	3300002908	Grasslands Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLDAIEHAEFGYKYT*
soilL2_100175705	3300003319	Sugarcane Root And Bulk Soil	METAPNRREILQEILDREDDLWIIMKPSRRNPADPDDLCVFQNPARWKEARVEIPHAWFADREVEKIERAVADAIARAEQGYRFTD*
soilH2_101658972	3300003324	Sugarcane Root And Bulk Soil	METAPNRREILQEILDREDDLWIIMKPSRRNPADPDDLCVFQNPARWKEARVEIPHAWFADREVEKIERAVADAIARA
soilH2_102301462	3300003324	Sugarcane Root And Bulk Soil	MGTAMNRREILQEILDREDDLWIIMKPSRRNPADPDELCVFQNPARWKEARAEIPHGWFLEREMEKIESAVAEAIARAEQGYRFTD*
Ga0062593_1022335361	3300004114	Soil	KEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0063356_1018792711	3300004463	Arabidopsis Thaliana Rhizosphere	LQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0066674_100166455	3300005166	Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0066684_100456084	3300005179	Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0066684_101623543	3300005179	Soil	LPNKREILQSILDKEDELWIIMKPSRTDPTDPEDLCIFQNPGRYKEARVEIPLSWFLNQEIEKIQSAVVDAIEHAEFGYRYT*
Ga0065717_10007441	3300005276	Arabidopsis Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0065716_10011721	3300005277	Arabidopsis Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSXFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0065712_100040303	3300005290	Miscanthus Rhizosphere	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0065705_102629602	3300005294	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYT*
Ga0068869_1004392112	3300005334	Miscanthus Rhizosphere	VTTLSNKRAILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0070689_1002916582	3300005340	Switchgrass Rhizosphere	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFHYT*
Ga0070671_1004510782	3300005355	Switchgrass Rhizosphere	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFQYT*
Ga0070681_104389191	3300005458	Corn Rhizosphere	METAANKREILQEILDREDDLWIIMKPSRRNPADPDDLCVFQSPARWKEARAEIPHAWFLDREIEKIESAVADAIARAEQGYRFTD*
Ga0070741_10000131250	3300005529	Surface Soil	METAANRREILQEILDREDDLWIMMKPSRRNPADPDELCVFQNPARWKEARVEIPHAWFVDREIAKIEAAVADALAHAEQGYRFTD*
Ga0070679_1012227651	3300005530	Corn Rhizosphere	METAANKREILQEILDREDDLWIIMKPSRRNPADPDDLCVFQNPARWKEAWAEIPHAWFLDREIEKIEAAVADAIARAEQGYRFTD*
Ga0070697_1009221831	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MFKAWVVATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0070693_1007287232	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTTLSNKRAILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALDTPNLDFSIHRL*
Ga0066707_100672302	3300005556	Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0066705_101526032	3300005569	Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARVEIPTCWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0068861_1011079012	3300005719	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYT*
Ga0081455_110089881	3300005937	Tabebuia Heterophylla Rhizosphere	MATLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEVPISWFLNQELEKIESAVLDAIEHAESGYKYI*
Ga0079222_100641053	3300006755	Agricultural Soil	VATLSNKREILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSG
Ga0079222_105853031	3300006755	Agricultural Soil	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADVEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0066658_102415542	3300006794	Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0066659_107850091	3300006797	Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSNSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0066660_102916242	3300006800	Soil	MVTLSTKREILQSILDKEDELWIILKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLNAIEHAEFGYKYT*
Ga0079221_100621564	3300006804	Agricultural Soil	VATLSNKREVLQAILDKEDDLWIIMKPSRNNPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT*
Ga0075433_104925661	3300006852	Populus Rhizosphere	MATLPNKREVLQSILDQQDDLWIVMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0075420_1001022755	3300006853	Populus Rhizosphere	MATLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPISWFLNQELEKIESAVLDAIEHAESGYKYI*
Ga0075434_1005489232	3300006871	Populus Rhizosphere	METAANRREILQEILDREDDLWIVMKPSRRNPADPDELCVFQNPARWKEAQVNIPHAWFLNNEIEKIESTVADAIARAEQGYRFTDG*
Ga0075426_100213124	3300006903	Populus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPTDPEDLCVFQNPGRWKEARVEIPMSWFLNKELEKIEAAVVDAIEHAESGYKYT*
Ga0075424_1001816226	3300006904	Populus Rhizosphere	MATLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0075424_1002899453	3300006904	Populus Rhizosphere	VTTLSNKRAILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFQYT*
Ga0075436_1003876881	3300006914	Populus Rhizosphere	AVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFHYT*
Ga0079218_112981582	3300007004	Agricultural Soil	MGTLLNKREVLQSILDKEDDFWIIMKPSRNHPTDPEDLCVFQNPAQYKEARVEIPTQWFMDEAFDKIESTVLDAIEHA
Ga0075435_1004060044	3300007076	Populus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNKELEKIEAAVVDAIEHAESGYKYT*
Ga0075435_1014183091	3300007076	Populus Rhizosphere	VTTLSNKRAILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFHYT*
Ga0105095_105436422	3300009053	Freshwater Sediment	MGMVPNKREILQAILDNEDGLWIIMKPSRNDPTDPEDLCVFQNPGRWKEARVEIPASWFLNQELEKIESAVLDAIENAESGYKYS*
Ga0105107_100638281	3300009087	Freshwater Sediment	MGMLPNKREILQAILDNEDGLWIIMKPSRNDPTDPEDLCVFQNPGRWKEARVEIPASWFLNQELEKIESAVLDAIENAESGYKYS*
Ga0099827_105061431	3300009090	Vadose Zone Soil	TKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0105250_105303891	3300009092	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIKHGESGYRYK*
Ga0111539_114073551	3300009094	Populus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQEVEKIEKAVLDAIEHGESGYRYT*
Ga0114129_103618311	3300009147	Populus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCIFQNPGRWKEARVEIPMSWFLNQELEKIETAVLDAIERAESGYKYT*
Ga0075423_107726651	3300009162	Populus Rhizosphere	MGTLPNKREVLQSILDEQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0105237_104752852	3300009545	Corn Rhizosphere	VTTLSNERAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0105249_107373954	3300009553	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0105088_10585801	3300009810	Groundwater Sand	KREVLQSILDKEDDLWIIMKPSRNDPTDPEDLCVFQNPGRWQEARVEIPMSWFLNQELEKIESAVLDAIEHAESGYKYM*
Ga0127503_101210672	3300010154	Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQKLEKIEKAVLDAIEHAESGYRYT*
Ga0134088_100082316	3300010304	Grasslands Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSNSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0134124_111746461	3300010397	Terrestrial Soil	VATLSNKRAVLQAILDKEDDLWIIMKPSRTDPADPADLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0134121_114793042	3300010401	Terrestrial Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESG
Ga0105246_101152662	3300011119	Miscanthus Rhizosphere	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFHYT*
Ga0137399_102161764	3300012203	Vadose Zone Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEEAVLDAIEHGESGYRYT*
Ga0137362_110240172	3300012205	Vadose Zone Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDRIESTVLDAIEHAEFGYKYT*
Ga0137376_100113583	3300012208	Vadose Zone Soil	VKLPNKREILQSILDKEDELWIIMKPSRADPTDPEDLCIFQNPGRYKEARVEIPLSWFLNQEIEKIQSAVVDAIEHAEFGYRYT*
Ga0137387_103963162	3300012349	Vadose Zone Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0137361_118340951	3300012362	Vadose Zone Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTV
Ga0157320_10251742	3300012481	Arabidopsis Rhizosphere	NKREVLQSILDQKDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0157333_10113661	3300012484	Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEH
Ga0157355_10075862	3300012493	Unplanted Soil	MGTLPNKREILQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLYAIEHGESGYRYK*
Ga0157339_10086952	3300012505	Arabidopsis Rhizosphere	MGTLPNKREVLQSIFDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0137397_100521282	3300012685	Vadose Zone Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCIFQNPGRWKEARVEIPMSWFLNQDLEKIETAVLDAIERAESGYKYT*
Ga0157285_101612872	3300012897	Soil	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQHT*
Ga0137410_109231012	3300012944	Vadose Zone Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGY
Ga0164299_105024951	3300012958	Soil	MGTVPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0134110_100040322	3300012975	Grasslands Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVVDAIEHAEFGYKYT*
Ga0157375_124961491	3300013308	Miscanthus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNSGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK*
Ga0134081_100220183	3300014150	Grasslands Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLDAIEHAEFGYKYT*
Ga0157377_107239391	3300014745	Miscanthus Rhizosphere	VTTLSNKRAILQAILDKEDDLWIIMKPSRNDPAEPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT*
Ga0120193_100584211	3300014965	Terrestrial	MGMLPNKREVLQSILDKEYDLWIIMKPSRNDPTDAEDLCVFQNPRRWQEARVEIPMSWFLNQELEKIESAVLDAIEHAESGYKYT*
Ga0137403_107319621	3300015264	Vadose Zone Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSGFLNQELEKIEKAVLDAIEH
Ga0132258_112230911	3300015371	Arabidopsis Rhizosphere	VATLSNKREILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT*
Ga0132256_1017410731	3300015372	Arabidopsis Rhizosphere	LSNKREVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT*
Ga0132257_1003705492	3300015373	Arabidopsis Rhizosphere	VATLSNKREVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT*
Ga0132255_1020949191	3300015374	Arabidopsis Rhizosphere	LDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT*
Ga0134083_100437792	3300017659	Grasslands Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESIVLDAIEHAEFGYKYT
Ga0163161_117148511	3300017792	Switchgrass Rhizosphere	LEKEDDLWIIMKPSRNDPADPEDLWILQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFQYT
Ga0163161_120770411	3300017792	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYT
Ga0184611_11410771	3300018067	Groundwater Sediment	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK
Ga0184635_101224072	3300018072	Groundwater Sediment	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIENTVLDAIEHGESGYRYT
Ga0184624_100030695	3300018073	Groundwater Sediment	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIENTVLDAIEHGESGYRYT
Ga0066655_101204133	3300018431	Grasslands Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT
Ga0066655_106453281	3300018431	Grasslands Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLDAIEHAEFGYKYT
Ga0066669_100040317	3300018482	Grasslands Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT
Ga0173479_102631352	3300019362	Soil	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADLEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFQYT
Ga0193719_103880271	3300021344	Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAV
Ga0212128_101114801	3300022563	Thermal Springs	EAVMATSNKRQILESILDKEEDLWIIIKPSRFDPEDPDSLCVFQNPAKYKEARVEIPTLWFQDRELEKIEQKVREAIEHAEMGYRY
Ga0207682_100893132	3300025893	Miscanthus Rhizosphere	VTTLSNKRAILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0207680_104396341	3300025903	Switchgrass Rhizosphere	ILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0207707_100278377	3300025912	Corn Rhizosphere	METAANKREILQEILDREDDLWIIMKPSRRNPADPDDLCVFQSPARWKEARAEIPHAWFLDREIEKIESAVADAIARAEQGYRFTD
Ga0207652_103726512	3300025921	Corn Rhizosphere	METAANKREILQEILDREDDLWIIMKPSRRNPADPDDLCVFQNPARWKEAWAEIPHAWFLDREIEKIEAAVADSIARAEQGYRFTD
Ga0207686_113033982	3300025934	Miscanthus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPADVEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0207709_118026532	3300025935	Miscanthus Rhizosphere	SNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0207670_103754752	3300025936	Switchgrass Rhizosphere	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFQYT
Ga0207704_104078402	3300025938	Miscanthus Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLSVFQNSGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYR
Ga0207668_104735783	3300025972	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK
Ga0207641_104126672	3300026088	Switchgrass Rhizosphere	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0207698_104127011	3300026142	Corn Rhizosphere	LDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0209438_10401203	3300026285	Grasslands Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCIFQNPGRWKEARVEIPMSWFLNQDLEKIETAVLDAIERAESGYKYT
Ga0209686_10350004	3300026315	Soil	STKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFMDKEFDKIESTVLDAIEHAEFGYKYT
Ga0209152_100647262	3300026325	Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT
Ga0209473_11137293	3300026330	Soil	TASTKREVLQSILDKEDELWIIMKPSRNDPTDSDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT
Ga0209057_10565471	3300026342	Soil	MVTASTKREVLQSILDKEDELWIIMKPSRNDPTDSNSLCIFQNPAQYKEARIEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT
Ga0209577_100278375	3300026552	Soil	MVTLSTKREILQSILDKEDELWIIMKPSRNDPTESDSLCIFQNPAQYKEARVEIPTRWFTDKEFDKIESTVLDAIEHAEFGYKYT
Ga0209846_10646802	3300027277	Groundwater Sand	KREVLQSILDKEDDLWIIMKPSRNDPTDPEDLCVFQNPGRWQEARVEIPMSWFLNQELEKIESAVLDAIEHAESGYKYM
Ga0209073_100176472	3300027765	Agricultural Soil	VATLSNKREVLQAILDKEDDLWIIMKPSRNNPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT
Ga0209074_101828901	3300027787	Agricultural Soil	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADVEDLCIFQSPRRWKEARVEIPMSWVANQELDKIQSAVLEALEHAQSGFQYT
Ga0209811_100108081	3300027821	Surface Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIERAESGYRYT
Ga0207428_100575005	3300027907	Populus Rhizosphere	MATLPNKREVLQSILDQQDDLWIVMKPSRNDPVDPEDLCVFQNPGRWKEARVEIPISWFLNQELEKIESAVLDAIEHAESGYKYI
Ga0207428_101831924	3300027907	Populus Rhizosphere	VATLSNKRAVLQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWVANQELDRIQSAVLEALEHAQSGFHYT
Ga0307503_103873192	3300028802	Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEEAVLDAIEHGESGYRYT
Ga0310813_101625934	3300031716	Soil	METAANRREILQEILDREDDLWIVMKPSRRNPADPDELCVFQNPARWKEAQVNIPHAWFLNNEIEKIESTVADAIARAEQGYRFT
Ga0307469_112487412	3300031720	Hardwood Forest Soil	MGTLPNKREVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRY
Ga0315910_100520474	3300032144	Soil	MGMLPNKREVLQTIIDKEDGLWIIMKPSRNDPTDPEDLCVFQNPGRWKEARVEIPASWFLNQELEKIESAVLEAIENAESGYKYG
Ga0310810_1000209517	3300033412	Soil	METAANRREILQEILDREDDLWIVMKPSRRNPADPDELCVFQNPARWKEAQVNIPHAWFLNNEIEKIESTVADAIARAEQGYRFTDG
Ga0310810_100250054	3300033412	Soil	VATLSNKREILQAILDKEDDLWIIMKPSRNDPADPEDLCIFQSPRRWKEARVEIPMSWFANQELDKIENAVREALEHAQSGFQYT
Ga0364933_093090_469_726	3300034150	Sediment	MGTLPNKQEVLQSILDQQDDLWIIMKPSRNDPIDPEDLCVFQNPGRWKEARVEIPMSWFLNQELEKIEKAVLDAIEHGESGYRYK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066680

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences