Metagenome Family F066614

Basic Information
Family ID	F066614
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	53 residues
Representative Sequence	LLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Number of Associated Samples	99
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.75 %
% of genes near scaffold ends (potentially truncated)	38.10 %
% of genes from short scaffolds (< 2000 bps)	74.60 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (64.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.397 % of family members)
Environment Ontology (ENVO)	Unclassified (46.032 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.762 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.91% β-sheet: 0.00% Coil/Unstructured: 49.09%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13538	UvrD_C_2	9.52
PF13604	AAA_30	4.76
PF04392	ABC_sub_bind	3.97
PF04986	Y2_Tnp	3.17
PF13610	DDE_Tnp_IS240	2.38
PF00536	SAM_1	2.38
PF00501	AMP-binding	1.59
PF13701	DDE_Tnp_1_4	1.59
PF13495	Phage_int_SAM_4	1.59
PF00589	Phage_integrase	0.79
PF02515	CoA_transf_3	0.79
PF00652	Ricin_B_lectin	0.79
PF13358	DDE_3	0.79
PF13683	rve_3	0.79
PF02518	HATPase_c	0.79
PF13340	DUF4096	0.79
PF08240	ADH_N	0.79
PF00857	Isochorismatase	0.79
PF07040	DUF1326	0.79
PF13185	GAF_2	0.79
PF14490	HHH_4	0.79
PF01361	Tautomerase	0.79
PF14559	TPR_19	0.79
PF14319	Zn_Tnp_IS91	0.79
PF13586	DDE_Tnp_1_2	0.79
PF02771	Acyl-CoA_dh_N	0.79
PF01738	DLH	0.79
PF00903	Glyoxalase	0.79
PF08028	Acyl-CoA_dh_2	0.79
PF14520	HHH_5	0.79
PF13191	AAA_16	0.79
PF00072	Response_reg	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.97
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.59
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.79
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.79
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
All Organisms	root	All Organisms	35.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
cellular organisms	root	All Organisms → cellular organisms	35.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.38 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.59 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.38 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.59 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.29 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	3.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.38 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.59 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.79 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10032097	Not Available	2953	Open in IMG/M
3300003505\|JGIcombinedJ51221_10004289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4184	Open in IMG/M
3300004081\|Ga0063454_101816192	Not Available	534	Open in IMG/M
3300005176\|Ga0066679_10484481	Not Available	808	Open in IMG/M
3300005598\|Ga0066706_10417060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300005718\|Ga0068866_10045296	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300005844\|Ga0068862_100474747	Not Available	1183	Open in IMG/M
3300006050\|Ga0075028_100950840	Not Available	532	Open in IMG/M
3300006797\|Ga0066659_10135259	Not Available	1731	Open in IMG/M
3300007788\|Ga0099795_10023016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2063	Open in IMG/M
3300009098\|Ga0105245_11272654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300009143\|Ga0099792_10136120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300009553\|Ga0105249_11136871	Not Available	851	Open in IMG/M
3300010037\|Ga0126304_10888607	Not Available	606	Open in IMG/M
3300010044\|Ga0126310_10456943	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300010045\|Ga0126311_10765172	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300010333\|Ga0134080_10019818	Not Available	2486	Open in IMG/M
3300010358\|Ga0126370_10775454	Not Available	852	Open in IMG/M
3300010358\|Ga0126370_12224070	Not Available	541	Open in IMG/M
3300010359\|Ga0126376_11235236	Not Available	764	Open in IMG/M
3300010359\|Ga0126376_11369856	Not Available	731	Open in IMG/M
3300010361\|Ga0126378_10766375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300010361\|Ga0126378_13211146	Not Available	520	Open in IMG/M
3300010375\|Ga0105239_12391857	Not Available	615	Open in IMG/M
3300010397\|Ga0134124_12673359	Not Available	542	Open in IMG/M
3300010398\|Ga0126383_11450323	Not Available	776	Open in IMG/M
3300010398\|Ga0126383_12873837	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300011120\|Ga0150983_10652397	Not Available	1657	Open in IMG/M
3300012202\|Ga0137363_10862197	Not Available	769	Open in IMG/M
3300012203\|Ga0137399_10046078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3133	Open in IMG/M
3300012209\|Ga0137379_10279021	Not Available	1582	Open in IMG/M
3300012211\|Ga0137377_11642836	Not Available	565	Open in IMG/M
3300012359\|Ga0137385_10249260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1538	Open in IMG/M
3300012361\|Ga0137360_11497967	Not Available	579	Open in IMG/M
3300012469\|Ga0150984_115152629	Not Available	1361	Open in IMG/M
3300012582\|Ga0137358_10308410	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300012683\|Ga0137398_10170792	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300012685\|Ga0137397_10657095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300012917\|Ga0137395_10235435	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300012922\|Ga0137394_11170120	Not Available	633	Open in IMG/M
3300012923\|Ga0137359_10926219	Not Available	750	Open in IMG/M
3300012955\|Ga0164298_11180914	Not Available	579	Open in IMG/M
3300012958\|Ga0164299_11329398	Not Available	551	Open in IMG/M
3300012971\|Ga0126369_10799246	Not Available	1025	Open in IMG/M
3300012971\|Ga0126369_12159716	Not Available	644	Open in IMG/M
3300012985\|Ga0164308_11550821	Not Available	610	Open in IMG/M
3300012985\|Ga0164308_12283187	Not Available	503	Open in IMG/M
3300012986\|Ga0164304_10320907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1070	Open in IMG/M
3300012986\|Ga0164304_11687932	Not Available	529	Open in IMG/M
3300012988\|Ga0164306_10573498	Not Available	880	Open in IMG/M
3300013306\|Ga0163162_11038249	Not Available	927	Open in IMG/M
3300013308\|Ga0157375_12292861	Not Available	644	Open in IMG/M
3300014745\|Ga0157377_10070614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2017	Open in IMG/M
3300014969\|Ga0157376_13101529	Not Available	503	Open in IMG/M
3300016294\|Ga0182041_10760188	Not Available	863	Open in IMG/M
3300016319\|Ga0182033_10220102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	1523	Open in IMG/M
3300016341\|Ga0182035_11288857	Not Available	654	Open in IMG/M
3300016357\|Ga0182032_12069964	Not Available	500	Open in IMG/M
3300016371\|Ga0182034_10128863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1867	Open in IMG/M
3300016371\|Ga0182034_10331793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300016371\|Ga0182034_11131875	Not Available	679	Open in IMG/M
3300016404\|Ga0182037_10571798	Not Available	956	Open in IMG/M
3300016404\|Ga0182037_11444023	Not Available	609	Open in IMG/M
3300016422\|Ga0182039_10363890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1218	Open in IMG/M
3300016422\|Ga0182039_10815990	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300016422\|Ga0182039_11304956	Not Available	658	Open in IMG/M
3300020583\|Ga0210401_10337907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300021403\|Ga0210397_10105797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1908	Open in IMG/M
3300021407\|Ga0210383_10543331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1003	Open in IMG/M
3300021560\|Ga0126371_13829481	Not Available	507	Open in IMG/M
3300025961\|Ga0207712_11028038	Not Available	732	Open in IMG/M
3300026088\|Ga0207641_10984568	Not Available	840	Open in IMG/M
3300026320\|Ga0209131_1111825	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300026555\|Ga0179593_1041954	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300027903\|Ga0209488_10033985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3721	Open in IMG/M
3300031573\|Ga0310915_11175410	Not Available	531	Open in IMG/M
3300031679\|Ga0318561_10288799	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300031680\|Ga0318574_10843045	Not Available	537	Open in IMG/M
3300031682\|Ga0318560_10375150	Not Available	769	Open in IMG/M
3300031719\|Ga0306917_11281203	Not Available	567	Open in IMG/M
3300031744\|Ga0306918_10476004	Not Available	977	Open in IMG/M
3300031744\|Ga0306918_10730604	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300031747\|Ga0318502_10105954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1564	Open in IMG/M
3300031763\|Ga0318537_10019066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2377	Open in IMG/M
3300031833\|Ga0310917_10178099	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300031879\|Ga0306919_10213047	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300031880\|Ga0318544_10059413	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300031890\|Ga0306925_11527945	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300031912\|Ga0306921_10349980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1727	Open in IMG/M
3300031912\|Ga0306921_11469038	Not Available	746	Open in IMG/M
3300031942\|Ga0310916_10279721	Not Available	1411	Open in IMG/M
3300031945\|Ga0310913_10221879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1324	Open in IMG/M
3300031945\|Ga0310913_11164520	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031946\|Ga0310910_10094589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	2207	Open in IMG/M
3300031946\|Ga0310910_10699125	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300031947\|Ga0310909_10246082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1493	Open in IMG/M
3300031947\|Ga0310909_10468353	Not Available	1057	Open in IMG/M
3300031962\|Ga0307479_11942877	Not Available	538	Open in IMG/M
3300032001\|Ga0306922_10137675	All Organisms → cellular organisms → Bacteria → Proteobacteria	2605	Open in IMG/M
3300032001\|Ga0306922_10306229	Not Available	1706	Open in IMG/M
3300032042\|Ga0318545_10345274	Not Available	536	Open in IMG/M
3300032059\|Ga0318533_10568731	Not Available	831	Open in IMG/M
3300032076\|Ga0306924_10225617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	2151	Open in IMG/M
3300032076\|Ga0306924_11572136	Not Available	694	Open in IMG/M
3300032076\|Ga0306924_11845420	Not Available	628	Open in IMG/M
3300032261\|Ga0306920_100951446	Not Available	1253	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.48%
Host-Associated	Host-Associated	9.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.68%
Plants	Host-Associated → Plants	9.52%
Aquatic	Environmental → Aquatic	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.17%
Sediment	Environmental → Aquatic → Sediment	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Loam	Environmental → Terrestrial → Soil → Loam	3.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.35%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100320971	3300001661	Forest Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRNP*
JGIcombinedJ51221_100042896	3300003505	Forest Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETVSRKP*
Ga0063454_1018161921	3300004081	Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETASQKP
Ga0066679_104844811	3300005176	Soil	EAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRNP*
Ga0066706_104170604	3300005598	Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP*
Ga0068866_100452964	3300005718	Miscanthus Rhizosphere	FMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEAAKAAALYKAETALRKP*
Ga0066903_1062118272	3300005764	Tropical Forest Soil	REKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP*
Ga0068862_1004747473	3300005844	Switchgrass Rhizosphere	MEAGNLLLEASMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEAAKAAALYKAETALRKP
Ga0075028_1009508402	3300006050	Watersheds	LLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETASPKP*
Ga0066659_101352591	3300006797	Soil	LLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP*
Ga0099795_100230164	3300007788	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRNPYGTLR*
Ga0105245_112726542	3300009098	Miscanthus Rhizosphere	MEAGNLLLEASMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEAAKAAALYKAETELRKP
Ga0099792_101361202	3300009143	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWDTIAEGTADSFEAAKAAAFYEAETALRKP
Ga0105249_111368712	3300009553	Switchgrass Rhizosphere	MEAGNLLLEASMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEAAKAAAFYKAETALRKP
Ga0126304_108886071	3300010037	Serpentine Soil	MEAGNLLLEAFMEAGEPTWKVREKTSDPLKWNMIAEGTVDSFEAAKAAALYEAETALQKP
Ga0126310_104569431	3300010044	Serpentine Soil	MEAGTLLLEAFMQAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKALSRRR*
Ga0126311_107651722	3300010045	Serpentine Soil	MQAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETELRKP*
Ga0134080_100198183	3300010333	Grasslands Soil	GVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP*
Ga0126370_107754541	3300010358	Tropical Forest Soil	MEAGNLLLEAFMEDGVPTWKVSEKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0126370_122240701	3300010358	Tropical Forest Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKPSGTPRYLG*
Ga0126376_112352361	3300010359	Tropical Forest Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKR
Ga0126376_113698562	3300010359	Tropical Forest Soil	MEVGNLLLEAFMEAGIPTWKVREKTSDPLKWNMIAEGTADSFEAAKTAARYEAETASRKP
Ga0126378_107663752	3300010361	Tropical Forest Soil	GNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP*
Ga0126378_132111461	3300010361	Tropical Forest Soil	FMDAGNLLLEAFMEAGVPTWKVREQIGDPLEWKMIAEGTSDSFEAAKAAALYEAETAIRKP*
Ga0105239_123918571	3300010375	Corn Rhizosphere	MEAGNLLLEAFMEAGVPTWKVREKTRDPLKWNMVAEGTADSFEAAKAAALCEAETALRKP
Ga0134124_126733592	3300010397	Terrestrial Soil	MEAGNLLLEASMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEVAKAAALYKAETALRKP
Ga0126383_114503232	3300010398	Tropical Forest Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETVLRKP
Ga0126383_128738371	3300010398	Tropical Forest Soil	MEAGVPTWKVREKTGDRLKWNMIAEGTADSFEAAKAAALYEAETASRKP*
Ga0150983_106523971	3300011120	Forest Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFDAAKAAALYEAETVSRKP
Ga0137363_108621973	3300012202	Vadose Zone Soil	MEAGNLLLEAFMDAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRNPYGTLR*
Ga0137399_100460783	3300012203	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAAFYEAETALRKP
Ga0137379_102790212	3300012209	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFETAKAAALYEVETALRKP
Ga0137377_116428361	3300012211	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTIDPLKWNMIAEGTADSFEAAKAAALYEAETASRKP
Ga0137385_102492604	3300012359	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAPKAAALYEAETALRKP
Ga0137360_114979671	3300012361	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNVIAEGTADSFEAAKAAALYEAETALRKP
Ga0150984_1151526292	3300012469	Avena Fatua Rhizosphere	MEAGNLLLEAFMEAGVPTWKVREKTRDPLKWNMIAEGTADSFDAAKAAALYKAETALRKP
Ga0137358_103084101	3300012582	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRK
Ga0137398_101707921	3300012683	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTIDPLKWNMIAEGTADSFEAAKAAALYEAETALRNPYGTLR*
Ga0137397_106570951	3300012685	Vadose Zone Soil	MEAGNLLLEAFMDAGVPTWKVREKTSDPLRWNMIAEGTADSFEAAKAVALYEAETALRRP
Ga0137395_102354351	3300012917	Vadose Zone Soil	METGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALCEAETALRKP
Ga0137394_111701202	3300012922	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRRP
Ga0137359_109262191	3300012923	Vadose Zone Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALCEAETALRKP
Ga0137416_100455186	3300012927	Vadose Zone Soil	LKWNMIAEGTADSFEAAKAAALYEAETALRNPYGTLR*
Ga0164298_111809142	3300012955	Soil	MEAGNLLLEAFMEADVPTWKVREKTRDPLKWNMISEGTADSFEAAKAAALYEAETALRKP
Ga0164299_113293981	3300012958	Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYKAETALRKP
Ga0126369_107992462	3300012971	Tropical Forest Soil	VFIEAGNLLLETFMEARVPTWKVREKTADPLKWNMIAEGTADSFEAAKAAALYEAETALRKP*
Ga0126369_121597162	3300012971	Tropical Forest Soil	MEAGNLLLEAFMEAGVPTWKVRAKTSDPLKWNMIAEGTADSFEAAKAATLY
Ga0164308_115508211	3300012985	Soil	MEAGNLLLEAFVEAGVPTWKVREKTSDPLKWNMVAEGTADSFEAAKAAALYEAETASRKR
Ga0164308_122831871	3300012985	Soil	AGNLLLEAFMEAGVPTWKVREKTRDPLKWNMIAEGTADSFDAAKAAALYKAETALRKP*
Ga0164304_103209073	3300012986	Soil	MEAGNLLLEAFMEAGVPTWNVREKTSDPLKWNIIAEGTADSFEAAKAAALYEAET
Ga0164304_116879321	3300012986	Soil	MEAGNLLLEAFMEAGVPTWKVREKTRAPLKWDMIAEGTADSFDAAKA
Ga0164306_105734983	3300012988	Soil	EAFMQAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALCEAETALRKP*
Ga0163162_110382492	3300013306	Switchgrass Rhizosphere	MEAGNLLLEASMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEAAKAAALCEAETALRKP
Ga0157375_122928612	3300013308	Miscanthus Rhizosphere	MEAGNLLLEAFMEAGVPTWKVREKTRDPLKWNMVAEGTADSFDAAKAAALYKAETALRKP
Ga0157377_100706141	3300014745	Miscanthus Rhizosphere	MEAGNLLLEAFMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEVAKAAALYKAETALRKP
Ga0157376_131015292	3300014969	Miscanthus Rhizosphere	MEAGNLLLEASMEAGVPTWKVREKTRDALKWNMIAEGTADSFEAAKAAALYKAETALRKP
Ga0182036_111579702	3300016270	Soil	PTWKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0182041_103158061	3300016294	Soil	EKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0182041_107601881	3300016294	Soil	GVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAGFYEAETALRKP
Ga0182041_116231221	3300016294	Soil	EKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0182033_102201021	3300016319	Soil	MEAGNLLLEAFMEAGVPTWKVRKKTSDPLKWNMIAEGAADSFEAAKAAALYEAKSALRKP
Ga0182035_107321151	3300016341	Soil	VREKTGDPLKWNMIAEGTADSFDAAKAAALYEAETALRKR
Ga0182035_112888571	3300016341	Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTVDSFEAAKAAALYEAETALRKP
Ga0182032_120699641	3300016357	Soil	EAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0182034_101288631	3300016371	Soil	MEAGVPTWKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0182034_103317932	3300016371	Soil	TWKVREKTSDPLKWNTIAEGTADSFEAAKPAAFYEAETALRKP
Ga0182034_111318751	3300016371	Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYKAETALRKP
Ga0182037_105717981	3300016404	Soil	VFMEAGNLLLEAFMEAGVPTWKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0182037_114440231	3300016404	Soil	AFMEAGVPTWKVREKTSDPLKWNMIAEGTVDSFEAAKAAALYEAETALRKP
Ga0182039_103638901	3300016422	Soil	KVREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAETALREP
Ga0182039_108159901	3300016422	Soil	AGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTVDSFEAAKAAALYEAETALRKP
Ga0182039_113049561	3300016422	Soil	GVPTWKVREKTSDPLKWNTIAEGTADSFEAAKPAAFYEAETALRKP
Ga0210401_103379072	3300020583	Soil	MEAGVPTWKVREKTSDPLKWNMVAEGTTDSFEAAKAAALYEAETASRKP
Ga0210397_101057973	3300021403	Soil	MEAGVPTWKVREKTSDPLKWNMVAEGTADSFEAAKAAALYEAETASRKP
Ga0210383_105433312	3300021407	Soil	AGVPTWKVREKTSDPLKWNIIAEGTADSFEAAKAAALYEADTALRKP
Ga0126371_116482422	3300021560	Tropical Forest Soil	PTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0126371_138294812	3300021560	Tropical Forest Soil	TLPAVFMEAGNLLLEAFMEAGVPTWKVREKTGDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0207712_110280382	3300025961	Switchgrass Rhizosphere	LLEASMEAGVPTWKVREKIRDPLIWNMIAEGTADSFEAAKAAAFYKAETALRKP
Ga0207641_109845682	3300026088	Switchgrass Rhizosphere	MEAGNLLLEAFMEAGVPTWKVREKTRDPLKWNMIAEGTADSFEAAKAAALYKAETALRKP
Ga0209131_11118254	3300026320	Grasslands Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALWKPYGTLR
Ga0179593_10419542	3300026555	Vadose Zone Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALWNPYGTLR
Ga0209488_100339856	3300027903	Vadose Zone Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRNPYGTLR
Ga0310915_111754101	3300031573	Soil	LEAFMEAGVPTWKVREKTSDPLKWNTIAEGTANSFEAAKAAAFYEAETALRKP
Ga0318561_102887993	3300031679	Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318574_108430451	3300031680	Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAETALRKP
Ga0318560_103751501	3300031682	Soil	LEAFMEGGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAGFYEAETALRKP
Ga0310686_1073925891	3300031708	Soil	KTSDPLKWNMIAEGTADSFEAAKAFYEAETALRKP
Ga0306917_101778912	3300031719	Soil	WKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0306917_112812032	3300031719	Soil	GNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTAASFEAAKAAAFYEAETALRKP
Ga0318501_101367831	3300031736	Soil	KVREKTSDQLKWHMIAEGTADSFEAAKAAALYEAETALRKP
Ga0306918_104760042	3300031744	Soil	VPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAGFYEAETALRKP
Ga0306918_107306042	3300031744	Soil	GVPTWKVREKTSDPLKWNMIAEGTVDSFEAAKAAALYEAETALRKP
Ga0318502_101059541	3300031747	Soil	MEGGAPTWKVREKTSDPLKWNTIAEGTADSFEAAKPAAFYEAETALRKP
Ga0318492_100418261	3300031748	Soil	KTRDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318537_100190663	3300031763	Soil	MEAGVPTWKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAE
Ga0318521_103533462	3300031770	Soil	WKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318547_101501432	3300031781	Soil	KTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318523_101336161	3300031798	Soil	TWKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318568_101648501	3300031819	Soil	EKTRDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0310917_101780992	3300031833	Soil	MEAGVPTWKVRERTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0306919_102130473	3300031879	Soil	MEGGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAETALREP
Ga0306919_106794291	3300031879	Soil	WKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318544_100594132	3300031880	Soil	MEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0306925_115279451	3300031890	Soil	PAVFMEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAETALREP
Ga0306923_103312831	3300031910	Soil	VREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0306921_103499802	3300031912	Soil	MEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0306921_114690382	3300031912	Soil	GNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTANSFEAAKAAAFYEAETALRKP
Ga0310912_102542461	3300031941	Soil	VREKTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0310916_102797211	3300031942	Soil	TLPAVFMEAGNLLLEAFMEGGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKPAAFYEAETALRKP
Ga0310913_102218793	3300031945	Soil	MEGGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAGFYEAETALRKP
Ga0310913_111645202	3300031945	Soil	VREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAETALREP
Ga0310910_100945891	3300031946	Soil	MEGGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKPAAFYEAETALRKP
Ga0310910_106991251	3300031946	Soil	PAVFMEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNMIAEGTVDSFEAAKAAALYEAETALRKP
Ga0310909_102235883	3300031947	Soil	TWKVRERTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0310909_102460821	3300031947	Soil	MEGGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAET
Ga0310909_104683531	3300031947	Soil	MEAENLLLEAFMEAGVPTWKVREKTGDPLKWNMIAEGTADSFDAAKAAALYEAETALRKR
Ga0307479_119428772	3300031962	Hardwood Forest Soil	AVLMEAGNLLLEAFMEAGVPTWKVRENTSDPLKWNMIAEGTADSFEAAKAAALYEAETASRKR
Ga0306922_101376751	3300032001	Soil	AFMEAGVPTWKVREKRSDPLKWNMVAEGTADSFEAAQAAALYEAETALRKP
Ga0306922_103062291	3300032001	Soil	MEAGNLLLEAFMEAGVPTWKVRERTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0318545_103452741	3300032042	Soil	FMEAGNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYEAETALRK
Ga0318506_100112371	3300032052	Soil	REKTSDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0318533_105687311	3300032059	Soil	LLLEAFMEAGVPTWKVRERTSDPLKWNMIAEGTADSFEAAKAAALYEAKAALRKP
Ga0306924_102256171	3300032076	Soil	MEGGAPTWKVREKTSDPLKWNTIAEGTADSFEAAKPAAFYEAETAL
Ga0306924_115721361	3300032076	Soil	PTWKVREKTSDPLKWNTIAEGTADSFEAAKAAGFYEAETALRKP
Ga0306924_118454201	3300032076	Soil	LLEAFMEAGVPTWKVREKASDPLKWNMIAEGTADSFEAAKAAALYEAETALRKP
Ga0306920_1009514461	3300032261	Soil	EAGNLLLEAFMEAGVPTWKVREKTSDPLKWNTIAEGTADSFEAAKAAAFYKAETALRKP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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