Metagenome Family F066612

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066612
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	78 residues
Representative Sequence	MRPDSVAWERAAEVREAAQGWRRVGAIDAPTEQAIREAYPDPCVTPSVVWRVLTACMVAAVVLCTFGAFS
Number of Associated Samples	101
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.00 %
% of genes near scaffold ends (potentially truncated)	97.62 %
% of genes from short scaffolds (< 2000 bps)	92.06 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.206 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.683 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.08% β-sheet: 0.00% Coil/Unstructured: 45.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF09925	DUF2157	14.29
PF02515	CoA_transf_3	1.59
PF04536	TPM_phosphatase	0.79
PF10808	DUF2542	0.79
PF07746	LigA	0.79
PF13452	MaoC_dehydrat_N	0.79
PF05140	ResB	0.79
PF00005	ABC_tran	0.79
PF00528	BPD_transp_1	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.59
COG1333	Cytochrome c biogenesis protein ResB	Posttranslational modification, protein turnover, chaperones [O]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	30.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	30.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	30.16 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	29.37 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	29.37 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101132108	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105716870	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	975	Open in IMG/M
3300000955\|JGI1027J12803_106545681	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300000955\|JGI1027J12803_109110744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300000956\|JGI10216J12902_113036980	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	905	Open in IMG/M
3300001139\|JGI10220J13317_10542300	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300002485\|C687J35088_10184565	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300004020\|Ga0055440_10081304	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	751	Open in IMG/M
3300004020\|Ga0055440_10090406	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300004281\|Ga0066397_10079792	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300004479\|Ga0062595_100859165	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300005174\|Ga0066680_10196633	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005181\|Ga0066678_10015317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3881	Open in IMG/M
3300005332\|Ga0066388_103320695	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005332\|Ga0066388_103544244	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005332\|Ga0066388_105954920	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005338\|Ga0068868_101885404	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005353\|Ga0070669_101626111	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005406\|Ga0070703_10243563	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005458\|Ga0070681_10675223	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005459\|Ga0068867_101514652	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005467\|Ga0070706_101632611	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005471\|Ga0070698_100231154	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300005546\|Ga0070696_100497877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	969	Open in IMG/M
3300005553\|Ga0066695_10701778	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005713\|Ga0066905_100592888	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005764\|Ga0066903_106438599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	612	Open in IMG/M
3300006049\|Ga0075417_10089855	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300006049\|Ga0075417_10274202	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006797\|Ga0066659_10566901	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300006804\|Ga0079221_10587698	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006844\|Ga0075428_100404379	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300006844\|Ga0075428_100517322	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300006844\|Ga0075428_101292178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300006844\|Ga0075428_101654686	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006871\|Ga0075434_100931244	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300006871\|Ga0075434_101279374	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	744	Open in IMG/M
3300006880\|Ga0075429_100804857	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300006881\|Ga0068865_100823843	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006969\|Ga0075419_10034390	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300007076\|Ga0075435_101781115	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300007265\|Ga0099794_10571529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300009012\|Ga0066710_101130745	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300009038\|Ga0099829_10213364	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300009038\|Ga0099829_10699143	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300009137\|Ga0066709_102193819	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300009147\|Ga0114129_13500044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300009162\|Ga0075423_11514527	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009803\|Ga0105065_1028651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300009806\|Ga0105081_1023728	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010043\|Ga0126380_12194786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300010047\|Ga0126382_11672401	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010048\|Ga0126373_10444014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1330	Open in IMG/M
3300010304\|Ga0134088_10111406	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300010326\|Ga0134065_10336183	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010358\|Ga0126370_10415374	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300010359\|Ga0126376_10337306	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300010359\|Ga0126376_11753501	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300010360\|Ga0126372_13086314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300010362\|Ga0126377_10285167	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300010362\|Ga0126377_10577293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1166	Open in IMG/M
3300010362\|Ga0126377_12807813	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012096\|Ga0137389_10058316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2942	Open in IMG/M
3300012096\|Ga0137389_11489619	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012189\|Ga0137388_11415042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300012189\|Ga0137388_11694804	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300012201\|Ga0137365_11192115	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300012203\|Ga0137399_10202434	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300012354\|Ga0137366_10487429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	891	Open in IMG/M
3300012917\|Ga0137395_10534452	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300012929\|Ga0137404_10955343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300012930\|Ga0137407_10521092	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300012930\|Ga0137407_10876714	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300013297\|Ga0157378_11929005	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300013308\|Ga0157375_12978398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300014262\|Ga0075301_1100989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300014326\|Ga0157380_10729251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1000	Open in IMG/M
3300015245\|Ga0137409_11477318	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300017656\|Ga0134112_10295871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300017792\|Ga0163161_11320323	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300018058\|Ga0187766_11446907	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300018063\|Ga0184637_10094854	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300018078\|Ga0184612_10054966	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300018433\|Ga0066667_10264355	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300018433\|Ga0066667_11387218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300025160\|Ga0209109_10028875	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300025325\|Ga0209341_10747566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300025933\|Ga0207706_11493741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300025938\|Ga0207704_10964203	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	720	Open in IMG/M
3300026089\|Ga0207648_10328440	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300026318\|Ga0209471_1319739	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026326\|Ga0209801_1093662	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300026329\|Ga0209375_1302288	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300026530\|Ga0209807_1353266	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300027013\|Ga0209884_1008640	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300027379\|Ga0209842_1096498	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027862\|Ga0209701_10592774	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300027880\|Ga0209481_10054814	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300027880\|Ga0209481_10542028	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300027949\|Ga0209860_1002695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2549	Open in IMG/M
3300028381\|Ga0268264_11588865	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300028536\|Ga0137415_10460813	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1077	Open in IMG/M
3300028536\|Ga0137415_10640811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300028589\|Ga0247818_10180924	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300028592\|Ga0247822_10040450	All Organisms → cellular organisms → Bacteria → Proteobacteria	3230	Open in IMG/M
3300028592\|Ga0247822_10288405	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300030336\|Ga0247826_10100401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1798	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1067313	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031562\|Ga0310886_10559445	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031720\|Ga0307469_11420505	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031720\|Ga0307469_11817773	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031740\|Ga0307468_100143345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300031820\|Ga0307473_11118043	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031834\|Ga0315290_10433359	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300031892\|Ga0310893_10589302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300032003\|Ga0310897_10245907	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300032075\|Ga0310890_10032770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2818	Open in IMG/M
3300032075\|Ga0310890_10201787	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300032122\|Ga0310895_10180495	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300032164\|Ga0315283_12262610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300032180\|Ga0307471_101037621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	986	Open in IMG/M
3300032180\|Ga0307471_101507927	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300032180\|Ga0307471_103949575	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300032205\|Ga0307472_101049273	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032954\|Ga0335083_10052716	All Organisms → cellular organisms → Bacteria → Proteobacteria	4290	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.57%
Host-Associated	Host-Associated	21.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.81%
Plants	Host-Associated → Plants	21.43%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.56%
Freshwater	Environmental → Aquatic → Freshwater	1.59%
Marine	Environmental → Aquatic → Marine	1.59%
Sediment	Environmental → Aquatic → Sediment	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	10.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Sand	Environmental → Terrestrial → Soil → Sand	4.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.38%
Lake	Environmental → Aquatic → Freshwater → Lake	1.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.59%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.59%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002485	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1011321082	3300000364	Soil	MRPDSIAWERAAEVRAAADRWGRAGAIDAPTLEAIRNVYPDPCVTPSAVWRVLTAVMVTAVVLCSFGAFALAIRPREVG
INPhiseqgaiiFebDRAFT_1057168701	3300000364	Soil	MRAESVAWERAAEVNEAAEGWRRVGAIDEATERAIRGAYPDPCITPSAVWRVLTACVVGAVIVCAFGAFEVAFRPRKEGHQVLLFLFAAACFAATEML
JGI1027J12803_1065456813	3300000955	Soil	MRAGSIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAFRPREVGLSLLLWLFGAA
JGI1027J12803_1091107442	3300000955	Soil	IAWERAAEVRAAADGWRRAGAIDAPTHEAIRNAYPDPGVTPSAVWRALTAVIVTAVVLCTLGAFAMATSPGDVGLGLLLWLFGVA
JGI10216J12902_1130369802	3300000956	Soil	MRPESIAWERAAEVRDAAEGWRRAGAIGAPTHEAIRNAYPDRCVTPSAVWRVLTAVMVTAVVLCSFGAFALAIRPREVGLSLLLWLFGAACVVATERLEVSPRLARRGT
JGI10220J13317_105423002	3300001139	Soil	MRLDSVAWERAAEVREAAEGWLRAGTIDRSTHAAVLNAYPDPCVTPSAVWRILTAVMVTAVMLCTLGAVWIAAQ
C687J35088_101845651	3300002485	Soil	MRQDSAAWERAAEVHEAAQGWLRVGAIDEPTEHAIREAFPDPCITPSAVWRVLTAGVVAAVIAFTF
Ga0055440_100813042	3300004020	Natural And Restored Wetlands	MRSTSIAWERAAEVHEAAQGWLRAGAIDAATGVAVRRAFPDPCVTPSAVWRVLTACVVAAVILCALEAFSLTFRPVKAGYQVLLFLFAGASLVA
Ga0055440_100904062	3300004020	Natural And Restored Wetlands	MRPDPIAWERAAEVRAAARGWWRAGAIDAVTLDAVHTAFLDPCVRPSMVWRALTAGMVTAVILCVVGAFWIAVRAEKT
Ga0066397_100797921	3300004281	Tropical Forest Soil	MRPDSIAWERGAEVRAAADGWTRAGAIDAPTLEAIRNAYPDPGVTPSAVWRV
Ga0062595_1008591652	3300004479	Soil	MRAEWAAWERAAEVQEAAEGWRRAGAIGTPTYDAIRNAYPDPCVTPSAVWRILTACMVTAVVVCTLGAFWVALRPGSTALSLL
Ga0066680_101966331	3300005174	Soil	MRPDSVAWERAAEVRAAAQGWRRAGAVDASTEQAIREAYPDPCITPSAVWRVLTACMVAA
Ga0066678_100153171	3300005181	Soil	MRPDSVAWERAAEVREAAQGWRRVGAIDASTEQAIREAYPDPCITPSAVWRVLTACMVAAVVACTFGALSLA
Ga0066388_1033206951	3300005332	Tropical Forest Soil	VRADAIAWERAAEVRDAAAAWRRVGAIDEDTESRIRETFPDPCLTPSAVWRVLTAAIVTAVIVCAFGAVVVAMRPGERAL
Ga0066388_1035442442	3300005332	Tropical Forest Soil	MRADSVAWERAAEVQEAAEGWRRAGAIGTPTYDAIRSAYPDPCVTPSAVWRILTACMVTAVMVCTLGAF
Ga0066388_1059549201	3300005332	Tropical Forest Soil	MRPESAAWDRAAEVRDAADGWFRVGAIDKETFDWINAAYPDPCVTPSIVWRVLTMAMVT
Ga0068868_1018854041	3300005338	Miscanthus Rhizosphere	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVV
Ga0070669_1016261111	3300005353	Switchgrass Rhizosphere	MRLDSVAWERAAEVREAAEGWLRAGTIDRSTHAAVLNAYPDPCVTPSAVWRILTAVMVTAVMLCTLGA
Ga0070703_102435631	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRAQSVAWERAAEVHEAAEGWRRAGAIDEATERAIHDVYPDPCVTPSALWRVLTACVVAAVTFCVFGAFEAAIRPGVSGHQVLLI
Ga0070681_106752232	3300005458	Corn Rhizosphere	MRLDSVAWERAAEVREAAEGWLRAGTIDRSTHAAVLNAYPDPCVTPSAVWRILTAVMV
Ga0068867_1015146522	3300005459	Miscanthus Rhizosphere	MRLDSVAWERAAEVREAAEGWLRAGTIDRSTHAAVLNAYPDPCVTPSAVWRILTAVMVTAVMLCTLGAVWIAAQPGEAGLSL
Ga0070706_1016326112	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPDSVAWERAAEVRGAADGWRRAGFIDEPTERAVQAIFPDPCVTPSAVWRVLNAG
Ga0070698_1002311541	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRAQSVAWERAAEVHEAAEGWRRAGAIDEATERAIRDAYPDPCVTPSALWRVLTACVVAAVTFCVFGAFEAAIRPG
Ga0070696_1004978772	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRAESVAWERAAEVQEAAEGWRRSGAIGTPTYEAIRNAYPDPCITPSAVWRILTACMVTAVVVCTLGAFWVALRPGSTALSLLLVVLGASAMVVTERL
Ga0066695_107017782	3300005553	Soil	MRADSVAWERAAEVNEAAEGWRCVEAIDDATERAIHEAYPDPCITPSAVWRVLTAG
Ga0066905_1005928881	3300005713	Tropical Forest Soil	MRSDAVAWERAAEVREAAEGWRRAEAIDTSTYDAIINAYPDPCVTPSAVWRVLTA
Ga0066903_1064385991	3300005764	Tropical Forest Soil	MRRDSVAWERAAEVREAAGGWLRAGAIGTSTYNAIRDAYPDPCVTPGAVWRVLTAAMVSVIIVCVAAALELG
Ga0075417_100898551	3300006049	Populus Rhizosphere	MRRDSVAWERAAEVREAAEGWLRAGAIDRPTREAIGSAYPDPCVTPAVVWRVLTAVLVSAVVLCTVGAVGVATQPG
Ga0075417_102742022	3300006049	Populus Rhizosphere	MRSESIAWERAAEVRAAADGWRRAGAIDARTHQAIRNAYPDPCITPSAVWRVLTAVMVTAIVL
Ga0066659_105669011	3300006797	Soil	MRRQSAAWERAAEVREVARGWRRAGAVDEPTEHEIRAAFPDPCVTPSVVWRVLTACTVAAIVLCTFGAFAVALRPRTGAFPPLM
Ga0079221_105876981	3300006804	Agricultural Soil	MRPASVGWERAAEVREAAAGWRRAGVITDATYRAIIHAYPDPCVTPSVVWRVLTAVMVSVIGVCTFGALWITLRPQA
Ga0075428_1004043792	3300006844	Populus Rhizosphere	MRRDSVAWERAAEVREAAEGWLRAGAIDRPTREAIGSAYPDPCVTPAVVWRVLTAVLVSAVVLCTVGAVGVATQPGTA
Ga0075428_1005173221	3300006844	Populus Rhizosphere	MRPESIAWERAAEVRDAADGWRRARAIGAPTHEAIRKAYSDPCVTPSAVWRVLTAVMVSAIVLCSFG
Ga0075428_1012921782	3300006844	Populus Rhizosphere	MRRQSIAWERAAEVRDAADGWRRAGAIGAPTHEAIKNAYPDPCVTPSAVWRVLTAVMVTAVVLCSFGAFALAIRPREVGLSLLLWLFGGACVVA
Ga0075428_1016546862	3300006844	Populus Rhizosphere	MRRESIAWERAADVRDAADGWRRAGAIGAPTHEAIKNAYPDPCVTPSAVWCALTAVMVTAVVLCSFGAFALAIRPREVGLSLLLWLFGGACVVA
Ga0075434_1009312442	3300006871	Populus Rhizosphere	MRPDSIAWERAAEVRAAADGWRRAGAIDAPTHEAIRNAYPDSGVTPSAVWRVLTAVMVTAVVLSTFGAVAMATSPRDVGLSLLLWLFGAACV
Ga0075434_1012793742	3300006871	Populus Rhizosphere	MRPESIAWERAAEVRAAADGWRRAGAIDAPTHEAIRNAYPDSGVTPSAVWRVLTAVMVTAVVLSTFGAVAMATSPRDVGLSLLLWLFGAACV
Ga0075429_1008048572	3300006880	Populus Rhizosphere	MRPDSIAWERAAEVRAAADGWRRAGAIDAPTHEAIRNAYPDSGVTPSAVWRVLTAVMVTAVVLSTFGAVAMATSPRDVGLSLLLWLFGAA
Ga0068865_1008238432	3300006881	Miscanthus Rhizosphere	MRPDSVAWERAAEVRGAADGWRRAGFIDEPTERAVQAIFPDPCVTPSAVWRVLNAGAVAA
Ga0075419_100343901	3300006969	Populus Rhizosphere	MRSESIAWERAAEVRAAADGWRRAGAIDARTHQAIRNAYPDPCITPSAVWRVLTAVMVTAIVLC
Ga0075435_1017811152	3300007076	Populus Rhizosphere	MRPDSIAWERAAEVRAAADGWRRAGAIDAPTHEAIRNAYPDSGVTPSAVWRVLTAVMVTAVVLSTFGAVAMATSPRDVGLSLLLWLFGAACVVATELLDVS
Ga0099794_105715292	3300007265	Vadose Zone Soil	MRPDAVAWERAAEVREAAQGWRRVGAIDAPTEQAIREAYSDPCITPSVVWRVLTACMVAAVLLCTFGALSLAFRSDRAGLQVLMFMF
Ga0066710_1011307451	3300009012	Grasslands Soil	MRSDSTAWERAAEVREAAQGWLRARAIDEPTERAIRQAFPDPCLTPSAVWRVLTACVVTAVLLCTLGAFAL
Ga0099829_102133641	3300009038	Vadose Zone Soil	MRLTSAAWERAAEVRDTAHGWLRVRAIDEPTAHAIREAFPDPCVTPSAVWRVLTACVVGAVILCAFEAFWL
Ga0099829_106991431	3300009038	Vadose Zone Soil	MRPDSVAWERAAEVREAAQGWRRVGAIDEPTEQAIRKAYPDPCLTPSAVWRALTACMVTA
Ga0066709_1021938192	3300009137	Grasslands Soil	MRRQSVAWERAAEVREAAQGWRRVGAVDEPTEHAIREAFPDPCVTPSAVWRVLTACMVAAIVLCTFG
Ga0114129_135000441	3300009147	Populus Rhizosphere	MRPDSIAWERAAEVRAAADGWGRAGAIDAPTLEAIRNVYPDPCVTPSAVWRVLTAVMVTAVVLCSFGAFALAIRPREV
Ga0075423_115145271	3300009162	Populus Rhizosphere	MRPESIAWERAAEVRAAADGWRRAGAIDAPTHEAIRNAYPDSGVTPSAVWRVLTAVMVTAVVLSTFGAVAMATSPRDDGLSLLL
Ga0105065_10286511	3300009803	Groundwater Sand	MRPESVAWERAAEVHEAARGWRRVGAIDEATDQAIRQAFPDPCITPSTVWRVLAAGVLAAVILCTFGALSIASRPGTTALQVLLFLYAGACLIATDV
Ga0105081_10237281	3300009806	Groundwater Sand	MRPQSVAWERAAEVHEAARGWRRVGAIDEATDQAIRQAFPDPCITPSTVWRVLAAGVLAAVI
Ga0126380_121947862	3300010043	Tropical Forest Soil	MRPESIAWERAAEVRDAADGWRRAGAVGAPTHEAIRNAYPDPCVTPSAVWRVLTAVMVTAIALCSFGAFALAIRPREVGLGLLLWLFSAACVVATELLEASPRFA
Ga0126382_116724011	3300010047	Tropical Forest Soil	MRPDSVGWERVAEVLAAADGWRRAGAIDAPTHAAIRNVYADPCVTPSPVWRVLTAVIVTAVVLCSFGAFAMAISPGDVG
Ga0126373_104440142	3300010048	Tropical Forest Soil	MRRESVAWERAREVHEAALGWLRVGAIDAATERVIRAAFPDPCTTPSLVWRALTAGMVSAIVLCAFGAFALAGRFSSTWLQVPLFFF
Ga0134088_101114061	3300010304	Grasslands Soil	MRRQSVAWERAAEVREAAQGWRRVGAVDEPTEHAIREAFPDPCVTPSAVWRVLTACMVAAIVLCTF
Ga0134065_103361831	3300010326	Grasslands Soil	MRADSVAWERAAEVNEAAEGWRCVEAIDDATERAIHEAYPDPCITPSAVWRVLTAGVVGAVIICA
Ga0126370_104153741	3300010358	Tropical Forest Soil	MRADSIAWERAAEVRAAAAGWRRAGFIDEATERAVQEAFPDPCVTPSLVWRVLTAGAVAAIVLCTLTACVLAF
Ga0126376_103373061	3300010359	Tropical Forest Soil	MRFDAVAWERAAEVREAAEGWRRAEAIDTSTYDAIINAYPDPCVTPSAVWRVLTAGVVTA
Ga0126376_117535011	3300010359	Tropical Forest Soil	MRPESIAWERAAEVRDAADGWRRAGAVGAPNHEAIRNAYPDPCVTPSAVWRVLTAVMVTAIALCSFGAFALAIRPSEVGLSLLLWLFGAACVVATEWLEASPRRARRG
Ga0126372_130863141	3300010360	Tropical Forest Soil	MRPQSIAWERAAEVRDAADGWRRAGAISAPTHEAIRNAYPDPCVTPSAVWRVLTAVMVTAIVLCSFGAFALAIRPSEVGLS
Ga0126377_102851673	3300010362	Tropical Forest Soil	MRPDSIAWERGAEVRAAADEWKRGGAIDAPNLEAIRNAYPDPGVTPSAVWRVLTAVMVTGVVLCTFGAFVLATRPR
Ga0126377_105772931	3300010362	Tropical Forest Soil	MRPESIAWERAAEIRDAADGWRRAGAIGAPTHEAIRNAYPDPSVTPPAVWRALTAVMVTAVVLCSFGAFALAIRPRELGLSLLLWLFGAA
Ga0126377_128078132	3300010362	Tropical Forest Soil	MRPESVAWERAAEVREAAEGWRRAGAIGTPTYDAFRNAYPDPCVTPGAVWRVLTAGMVSAIVVCV
Ga0137389_100583161	3300012096	Vadose Zone Soil	MRPDSIAWERAAEVREAAQGWRRVGAIDAPTEQAIREAYPDPCITPSVVWRVLTVCMVAAVVLCTFGAFSLAFRPDQAGLQVLIFLFAGA
Ga0137389_114896192	3300012096	Vadose Zone Soil	MRPESVAWERAAEVREAAQGWRRVGAIAEPTEQAIREAYPDPCLTPSAVWRALTACMVTAIILCTFGAFSVGT
Ga0137388_114150421	3300012189	Vadose Zone Soil	MRAESVAWERAAEVGEAAEGWRRAGAIDEATERAIRRIYPDPCVTPSIVWRVLMACVVAVVIVCAFGAFEVAFRPNKEGHQVLLFFFGAVALGAAE
Ga0137388_116948041	3300012189	Vadose Zone Soil	MRPDSVAWERAAEVREAAQGWRRVGAIDEPTEQAIREAYPDPCPTPSAVWRVLTACMVAAVVLCTFGAFSLAFRPDQAGLQVLMFLFAGAS
Ga0137365_111921151	3300012201	Vadose Zone Soil	MRAQSVAWERAAEVHEAAEGWRRAGAIDEATERAIRDAYPDPCVTPSALWRVLTACVVAAVTFCVFGAFEAAFRPGVSGHQILLIL
Ga0137399_102024343	3300012203	Vadose Zone Soil	MRPDSVAWERAAEVREAAQGWRRVGAIDASTEQAIREAYPDPCITPSAVWRVLTACMGAAVVSCTFGALSLAFRPDRAGL*
Ga0137366_104874292	3300012354	Vadose Zone Soil	MRAQSVAWERAAEVHEAAEGWRRAGAIDEATERAIRDAYPDPCVTPSALWRVLTACVVAAVTFCVFGAFEAAIRPGVSGHQVLLILLAAASLAV
Ga0137395_105344521	3300012917	Vadose Zone Soil	MRPDSVAWERAAEVREAAQGWRRAGAIDASTEQAIREAYPDPCITPSAVWRVLTACMVAAVVACTFGALSLAFRPDRAGLQV
Ga0137404_109553431	3300012929	Vadose Zone Soil	MRAESVAWERAAEVREAAEGWRRASAIDEATARAIRDAYPDPCVTPSALWRVLTACVVAAVTFCVFGAFEAAFRPRVSGHQVLLILL
Ga0137407_105210922	3300012930	Vadose Zone Soil	MRRQSVAWERAAEVREAAQGWRRVGAVDEPTEHAIREAFPDPCVTPSAVWRVLTACMVAAIVLCTFGAFAVA
Ga0137407_108767141	3300012930	Vadose Zone Soil	VREAAQGWLRARAIDEPTERAIRQAFPDPCLTPSAVWRVLTACVVTAVLLCTLGAFALVTRPAATAGFGVLLLL
Ga0157378_119290051	3300013297	Miscanthus Rhizosphere	MRRESVAWERAAEVREAAEGWLRAGAIGTATYDAVLNVFLVPCVTPSAVWGVLTAGMVTA
Ga0157375_129783981	3300013308	Miscanthus Rhizosphere	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAIRPREVGLSLLLWLFGAACVVATERLEVSPRLARRGAAGAAAF
Ga0075301_11009891	3300014262	Natural And Restored Wetlands	MRAASVAWERAAEVRRAAQGWRRVGAIDQATEETIRGAFRDPCLTPSPVWRVLTACVVTAVILGVVGAFALALRGQDRLAPLMFLCAGASI
Ga0157380_107292511	3300014326	Switchgrass Rhizosphere	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAIRPREVGLSLLLWLFGAACVVATERLEASPRLARRGVAGAAAFWGIVLFL
Ga0137409_114773182	3300015245	Vadose Zone Soil	MRRESVAWERAAEVREAAEGWLRAGAVGTATYDAVRNAYPDPCVTPSAVWRVLTAGMVTA
Ga0134112_102958711	3300017656	Grasslands Soil	MRRQSVAWERAAEVREAAQGWRRVGAVDEPTEHAIREAFPDPCVTPSAVWRVLTACMVAAIVLCTFGAFAVALQPRPNAFPPLMFLFGGA
Ga0163161_113203232	3300017792	Switchgrass Rhizosphere	MRSESVAWERAAEVREAAEGWRRAQIIGTPSYEAIRQAYPDPCVTPSAIWRILTAVMVTAVTLCSLGALWLAT
Ga0187766_114469072	3300018058	Tropical Peatland	VRAGSAAWERAAEVRRAAEGWRRAGAIDGLTLERIHAAFPDPCVTPSAVWRVLTAGVVTVIVLCTLGACWI
Ga0184637_100948541	3300018063	Groundwater Sediment	MRPESVVWERAAEVHEAARGWRRIGAIDEATDQAIRQAFPDPCITPSAVWRVLAAGVLAAVILCTFGALSIAFRPGTTA
Ga0184612_100549663	3300018078	Groundwater Sediment	MRPNSIAWERAADVHEAAQGWLRVGAVDEPTADAIRKTFPDPCVTPSAVWRVLTACVVAAVVLCTFQAVSIAFRPGKIG
Ga0066667_102643551	3300018433	Grasslands Soil	MRPDSVAWERAAEVRAAAQGWRRVGAIDASTEQAIREAYPDPCITPSAVWRVLTACMVAA
Ga0066667_113872182	3300018433	Grasslands Soil	MRRQSVVWERAAEVREVARGWRRAGAVDEPTEHEIRAAFPDPCVTPSVVWRVLTACTVAAIVLCTFGAFAVALRPRTGAFPPLMF
Ga0209109_100288751	3300025160	Soil	MRQDSAAWERAAEVHEAAQGWLRVGAIDEPTEHAIREAFPDPCITPSAVWRVLTAGVVAAVILCTFEAFRIAFRPDEIGYQVLLFLFAGA
Ga0209520_102742892	3300025319	Soil	MRQNSAAWERAAEVREAAQGWLRAGAIDEPTGHAIREAFPDPCITPSVVWRVLTACVVAAVILFAYAGFSIALRPGEIGDQILLFLFAGASLASADWLE
Ga0209341_107475662	3300025325	Soil	MRQDSAAWERAAEVHEAAQGWLRVGAIDEPTEHAIREAFPDPCITPSAVWRVLTAGVVAAVIAFTFEAFSIAFRPSEIGHQVLLFLFAGASLASADLLEAS
Ga0207706_114937412	3300025933	Corn Rhizosphere	MRPDSVAWERAAEVRGAADGWRRAGFIDEPTERAVQAIFPDPCVTPSAVWRVLNAGAVAAVILFSFGAFAPR
Ga0207704_109642032	3300025938	Miscanthus Rhizosphere	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAIRPREVGLSLLLWLFGAACVV
Ga0207648_103284401	3300026089	Miscanthus Rhizosphere	MRPDSVAWERAAEVRGAADGWRRAGFIDEPTERAVQAIFPDPCVTPSAVWRVLNAGAVTAVIL
Ga0209471_13197391	3300026318	Soil	MRPESVAWERAAEVREAAQGWRRTGAIDAPTEQAIREAYPDPCITPSAVWRVLTACMV
Ga0209801_10936621	3300026326	Soil	MRPDSVAWERAAEVRAAAQGWRRAGAVDASTEQAIREAYPDPCITPSAVWRVLTACMVAAVVACTFGALSLAFRPDRA
Ga0209375_13022882	3300026329	Soil	MRADSVAWERAAEVNEAAEGWRCVEAIDDATERAIHEAYPDPCITPSAVWRVLTA
Ga0209807_13532662	3300026530	Soil	MRPDSVAWERAAEVRAAAQGWRRAGAIDASTEQAIREAYPDPCITPSAVWRVLTACMVAAVVACTFGALSLAF
Ga0209884_10086402	3300027013	Groundwater Sand	MRPESVAWERAAEVHEAARGWRRVGAIDEATDQAIRQAFPDPCITPSTVWRVLAAGVLAAVILCTFGAFSIALRPG
Ga0209842_10964981	3300027379	Groundwater Sand	MRPESVAWERAAEVHEAARGWRRVGAIDEATDQAIRQAFPDPCITPSTVWRVLAAGVLAAVILCTF
Ga0209701_105927742	3300027862	Vadose Zone Soil	MRAESVAWERAAEVHEAAEGWRRAGAIDEATARAIRDAYPDPCVTPSALWRVLTACVVAAVTFCVFGAFEAAFRPGVSGHQVLL
Ga0209481_100548143	3300027880	Populus Rhizosphere	MRRESAAWERAAEVREAADGWLRVGAIDGATHGAITTAYPDPCVTPSAVWRVLTAV
Ga0209481_105420281	3300027880	Populus Rhizosphere	MRPESIAWERAAEVRDAADGWRRARAIGAPTHEAIRKAYSDPCVTPSAVWRVLTAVMVSAIVLCSFGAFA
Ga0209860_10026954	3300027949	Groundwater Sand	MRPESVAWERAAEVREAARGWRRVGAIDEATEQAIRQAFPDPCITPSAVWRVLAAAVLAAIILCTF
Ga0268264_115888652	3300028381	Switchgrass Rhizosphere	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAIRPREVGLSLLLWLFGAACVVATERLEVSPRLARRGAAGAAAFWGILLFLG
Ga0137415_104608132	3300028536	Vadose Zone Soil	MRPESITWERAAEVRAAADGWRRAGAIDGPTHDAIRRAYPDPCVTPSAVWRVLTAVMVTIVVLCALGAVAVTTRPREPGFTVLLWLFGAACVVATEYMEASPRLARRGVA
Ga0137415_106408111	3300028536	Vadose Zone Soil	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAIRPREVGLSLLLWLFGAACVVATERLEVSPRLARRGA
Ga0247818_101809241	3300028589	Soil	MRSESVAWERAAEVREAAEGWRRAQIIGTPAYEAIRQAYPDPCVTPSAIWRILTAVMVTAVTLCSLGALWLATRPGSTGLALL
Ga0247822_100404506	3300028592	Soil	MRSESVAWERAAEVREAAEGWRRAQIIGTPAYEAIRQAYPDPCVTPSAIWRILTAVMVTAVTLCSLGALWLATRPGST
Ga0247822_102884052	3300028592	Soil	MRPEGAAWERAAEVREAAEGWLRAGAVDRPTHEAIENAYPDPCVTPSPVWRILTAVMVTAVALCALGAVWIATGQPGETGLSV
Ga0247826_101004013	3300030336	Soil	MRPEGAAWERAAEVREAAEGWLRAGAVDRPTHEAIENAYPDPCVTPSPVWRILTAVMVTAVALCALGAVWIATGQPGETGLSVL
(restricted) Ga0255311_10673132	3300031150	Sandy Soil	MRPDSVAWERAAEVREAAQGWRRVGAIDAPTEQAIREAYPDPCVTPSVVWRVLTACMVAAVVLCTFGAFS
Ga0310886_105594452	3300031562	Soil	MRSESVAWERAAEVREAAEGWRRAQIIGTPAYEAIRQAYPDPCVTPSAIWRILTAVMVTAVTLCSLG
Ga0307469_114205051	3300031720	Hardwood Forest Soil	MRPDSIAWERAAEVRAAADGWGRAGAIDAPTLEAIRNVYPDPCVTPSAVWRVLTAVM
Ga0307469_118177732	3300031720	Hardwood Forest Soil	MRAESVAWERTAEVQEAAEGWRQAGAIGTPTYDAIRNAYPDPCVTPSAVWRILTACMVTAVVVCTLGAFWVALRPGSTPLSLLLVLL
Ga0307468_1001433453	3300031740	Hardwood Forest Soil	MRAESVAWERAAEVHEAAEGWRRAGAIDEATERAIRDAYPDPCVTPSALWRVLTACVVAAVTFCAFGAFEAAFRPGVSGHQVLLILLAA
Ga0307473_111180432	3300031820	Hardwood Forest Soil	MRLDSAAWERAAEVHEAARGWLGAGAIDQATERMIRDAFPDPCITPTVVWRVLTAVILAAVILCTFGAVALAIG
Ga0315290_104333591	3300031834	Sediment	MRLTSAAWERAAEVREAAQGWLRVGAIDEPTGHAIREAFPDPCITPSAVWRVLTAC
Ga0310893_105893022	3300031892	Soil	MRLDSVAWERAAEVREAAEGWLRAGAIDRSTHGAVLNAYPDPCVTPSAVWRILTAVMATAVML
Ga0310897_102459072	3300032003	Soil	MRSESVAWERAAEVREAAEGWRRAQIIGTPAYEAIRQAYRDPCVTPSAIWRILTAVMVTAVTLCSLGALWLATR
Ga0310890_100327704	3300032075	Soil	MRLDSVAWERAAEVREAAEGWLRAGTIDRSTHAAVLNAYPDPCVTPSAVWRILTAVMVTAVMLCTLGAVWIAAQPGEAGLSVL
Ga0310890_102017871	3300032075	Soil	MRSESVAWERAAEVREAAEGWRRAQIIGTPAYEAIRQAYPDPCVTPSAIWRILTAVMVTAVTLCSLGALWLATRPGSTGLALLIVVLGVAA
Ga0310895_101804952	3300032122	Soil	MRLDSVAWERAAEVREAAEGWLRAGTIDRSTHAAVLNAYPDPCVTPSAVWRILTAVMVTAVM
Ga0315283_122626101	3300032164	Sediment	MRLTSAAWERAAEVREAAQGWLRVGAIDEPTGHAIREAFPDPCITPSAVWRVLTACVVAAVLLCTFEAFSIAFRPGKIGHQVLLFLF
Ga0307471_1010376211	3300032180	Hardwood Forest Soil	MRPESIAWERAAEVRDAADGWRRAGAIGAPTHEAIRNAYLDRCVTPSAVWRVLTAVMVTAVVVCTFGAFALAIRPREVGLSLLLWLFGAACVVATERLEV
Ga0307471_1015079272	3300032180	Hardwood Forest Soil	MRAESVAWERTAEVQEAAEGWRQAGAIGTPTYDAIRNAYPDPCVTPSAVWRILTACMVTAVVVCTLG
Ga0307471_1039495752	3300032180	Hardwood Forest Soil	MRAESVAWERAAEVNEAAEGWRRAGAIDEPTERAIREAYPDPCITPSAVWRVLTACVVGAVIVCAFGAFEVAFRPRKEGHQVLLFLF
Ga0307472_1010492732	3300032205	Hardwood Forest Soil	MRRESVAWERAAEVREAAEGWLRAQIIGTPAYEAIRNAYPDPCVTPSAVWRILTAAMVTAVTLCSLGALWLAIRPDSTGLALL
Ga0335083_100527166	3300032954	Soil	MRADSVAWERAAEVREVAGGWRRAGFIDEPTEQAIREAFPDPCVTPSLVWRVLTAGVLAAAIKAAFGAFAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters