Metagenome Family F066571

Basic Information
Family ID	F066571
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	67 residues
Representative Sequence	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Number of Associated Samples	91
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	89.68 %
% of genes near scaffold ends (potentially truncated)	30.16 %
% of genes from short scaffolds (< 2000 bps)	75.40 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Duplodnaviria (64.286 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (24.603 % of family members)
Environment Ontology (ENVO)	Unclassified (75.397 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (65.079 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96 1B570J29032_1097240571 2B570J40625_1004829703 3JGI25908J49247_100728862 4JGI25909J50240_10308642 5JGI25926J51410_10416993 6JGI25924J51412_10033492 7JGI25923J51411_10176382 8Ga0070374_100526694 9Ga0070374_106710042 10Ga0068876_1000072937 11Ga0049081_100135548 12Ga0049081_100973972 13Ga0049081_101779302 14Ga0049082_100759901 15Ga0079957_10183397 16Ga0075464_100428946 17Ga0075464_102031783 18Ga0075464_104485361 19Ga0075464_110070862 20Ga0108970_106211782 21Ga0114336_12097252 22Ga0114363_100270826 23Ga0114363_11246952 24Ga0114363_11828172 25Ga0114876_10510073 26Ga0114880_10686082 27Ga0114880_11008302 28Ga0114880_12642861 29Ga0114880_12653781 30Ga0105098_100268023 31Ga0114962_100368946 32Ga0114963_103076352 33Ga0114977_100144349 34Ga0114977_100899902 35Ga0114978_103366791 36Ga0114981_104769681 37Ga0114966_101190643 38Ga0114970_101724622 39Ga0114958_105311811 40Ga0114958_105535232 41Ga0114964_100646614 42Ga0129324_104211401 43Ga0129336_103674513 44Ga0151514_1010159 45Ga0153800_10196051 46Ga0164293_102220672 47Ga0164293_106207002 48Ga0164292_101546824 49Ga0177922_104515502 50Ga0177922_107324151 51Ga0177922_109039932 52Ga0181364_10080572 53Ga0181350_11293942 54Ga0181347_11004341 55Ga0181365_10375453 56Ga0181356_11663842 57Ga0181348_10873293 58Ga0181355_10668503 59Ga0181355_11382951 60Ga0181355_13698701 61Ga0181359_10094813 62Ga0181359_10272412 63Ga0181359_10956682 64Ga0181359_11240372 65Ga0211732_10425702 66Ga0211732_10662773 67Ga0211733_104534892 68Ga0211731_114255862 69Ga0208360_10213622 70Ga0222714_100475435 71Ga0222714_106637952 72Ga0222713_103866072 73Ga0222712_103510122 74Ga0181353_10224965 75Ga0181354_10717404 76Ga0214917_1000640917 77Ga0214917_100459426 78Ga0214921_1000262135 79Ga0214921_1001911815 80Ga0208916_101786392 81Ga0209552_10035836 82Ga0209651_10901831 83Ga0209651_10901981 84Ga0208974_10328532 85Ga0209357_10333774 86Ga0209553_12413371 87Ga0209443_10436615 88Ga0209499_10129766 89Ga0209499_12435292 90Ga0209297_10169189 91Ga0209190_11284982 92Ga0209190_11701132 93Ga0209972_1000090720 94Ga0209985_104819262 95Ga0209820_10213123 96Ga0209299_10573453 97Ga0315288_105276881 98Ga0315900_101669591 99Ga0315909_102393882 100Ga0315909_102560014 101Ga0315909_102673503 102Ga0315285_103628363 103Ga0315278_102763795 104Ga0315274_102323652 105Ga0315903_111334762 106Ga0315295_112794811 107Ga0315287_103506352 108Ga0315273_126437652 109Ga0334980_0328720_166_408 110Ga0334982_0273104_557_757 111Ga0334994_0053637_717_917 112Ga0334994_0104442_1340_1582 113Ga0334994_0158463_566_766 114Ga0334979_0130052_566_766 115Ga0334983_0423822_600_761 116Ga0334995_0024189_5163_5345 117Ga0335027_0018524_3080_3322 118Ga0335027_0645118_395_637 119Ga0335031_0051426_2804_2968 120Ga0335031_0064107_293_493 121Ga0335031_0653673_2_172 122Ga0335035_0164762_410_610 123Ga0335063_0350193_42_284 124Ga0335053_0038624_3258_3428 125Ga0335060_0064071_320_520 126Ga0335007_0185577_304_546
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96 1B570J29032_1097240571 2B570J40625_1004829703 3Ga0049081_100135548 4Ga0108970_106211782 5Ga0211732_10662773 6Ga0315909_102560014 7Ga0315295_112794811 8Ga0335027_0645118_395_637
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96 1B570J29032_1097240571 2B570J40625_1004829703 3Ga0049081_100135548 4Ga0108970_106211782 5Ga0211732_10662773 6Ga0315909_102560014 7Ga0315295_112794811 8Ga0335027_0645118_395_637
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.39% β-sheet: 0.00% Coil/Unstructured: 77.61%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03330	DPBB_1	13.49
PF01844	HNH	7.94
PF00534	Glycos_transf_1	4.76
PF05119	Terminase_4	2.38
PF02945	Endonuclease_7	1.59
PF13207	AAA_17	0.79
PF04098	Rad52_Rad22	0.79
PF13238	AAA_18	0.79
PF09723	Zn-ribbon_8	0.79
PF13578	Methyltransf_24	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	2.38

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.76 %
Viruses	superkingdom	All Organisms → Viruses	95.24 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	64.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.95 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	64.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.95 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.95 %
Unclassified	root	N/A	4.76 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	64.29 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	64.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.95 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	64.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.95 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	30.95 %
Unclassified	root	N/A	4.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	64.29 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002408\|B570J29032_109724057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1137	Open in IMG/M
3300002835\|B570J40625_100482970	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1171	Open in IMG/M
3300003277\|JGI25908J49247_10072886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	857	Open in IMG/M
3300003393\|JGI25909J50240_1030864	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1177	Open in IMG/M
3300003490\|JGI25926J51410_1041699	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	820	Open in IMG/M
3300003491\|JGI25924J51412_1003349	All Organisms → Viruses → Predicted Viral	3088	Open in IMG/M
3300003493\|JGI25923J51411_1017638	All Organisms → Viruses → Predicted Viral	1474	Open in IMG/M
3300005517\|Ga0070374_10052669	All Organisms → Viruses → Predicted Viral	2117	Open in IMG/M
3300005517\|Ga0070374_10671004	Not Available	513	Open in IMG/M
3300005527\|Ga0068876_10000729	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	26576	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.21%
Plants	Host-Associated → Plants	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.48%
Leaf	Host-Associated → Plants → Leaf	0.79%
Marine	Environmental → Aquatic → Marine	8.73%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.56%
Lake	Environmental → Aquatic → Freshwater → Lake	53.97%
Lentic	Environmental → Aquatic → Freshwater → Lentic	30.95%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	48.41%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	29.37%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.97%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.17%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	19.84%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.14%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.97%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	24.60%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	13.49%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.59%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.59%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.17%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.56%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

Previous1 2 3 4 5…10Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1097240571	3300002408	Freshwater	MRYDSCAAARLVALRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHY
B570J40625_1004829703	3300002835	Freshwater	MRYDLRATARPFGVLPSLSLPVVSSHRQGLSWGSVDARTTIMAIAGQRGTSGATPLLLHHYWRANG*
JGI25908J49247_100728862	3300003277	Freshwater Lake	MMRYAFSATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG*
JGI25909J50240_10308642	3300003393	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG*
JGI25926J51410_10416993	3300003490	Freshwater Lake	FWATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG*
JGI25924J51412_10033492	3300003491	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQRETSGATPLLLHHYRRANG*
JGI25923J51411_10176382	3300003493	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDARTTTMAIAGQQETSGATPLLLHHYRRANG*
Ga0070374_100526694	3300005517	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLIWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG*
Ga0070374_106710042	3300005517	Freshwater Lake	RYAFSATARPFGVLQSLALPVESSHRQGLTWGSADACTTITAIAGQQGTSGATPLLLHHYRRANG*
Ga0068876_1000072937	3300005527	Freshwater Lake	MRYDSCATARPFGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYRRANG*
Ga0049081_100135548	3300005581	Freshwater Lentic	MMRYDARVSAHSLLRSLCLPVVSSHRQALTWGSVDAPTTMMAIAGQGETSGATPLLLHHYRRAHG*
Ga0049081_100973972	3300005581	Freshwater Lentic	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG*
Ga0049081_101779302	3300005581	Freshwater Lentic	MRYDLQATARLVVLRSLSLPVVSSHRQGLLWGSVDAPTTTMAIAGQGGTSGATPLLLHHYWRTNG*
Ga0049082_100759901	3300005584	Freshwater Lentic	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG*
Ga0079957_10183397	3300005805	Lake	MRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRANG*
Ga0075464_100428946	3300006805	Aqueous	MRYDQRAAARLVVLRSLTLPLVSSQRQGLLWGSVDARTTTTAMPGQRGTSGATPLLLHHYWRANG*
Ga0075464_102031783	3300006805	Aqueous	MRYALSATARPFGVLLSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRA
Ga0075464_104485361	3300006805	Aqueous	MMRYDSCATARLMALRSLALPVVSSHRQGLPWGSVDARTTIMAIAGQRGTSGATPLLL
Ga0075464_110070862	3300006805	Aqueous	MRYDLRATARPYGVLLSLALPVESSHRQGLLWGSVDARTTIMAIAGQRGTSGATPLLLHH
Ga0108970_106211782	3300008055	Estuary	MRYALPATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGAT
Ga0114336_12097252	3300008261	Freshwater, Plankton	MMRYALSATARPFGVLPSLALPVESSHRQGLPWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG*
Ga0114363_100270826	3300008266	Freshwater, Plankton	MRYDLRAAARLVVLRSLTLPLVSSQRQGLLWGSVDARTTTTAMPGQRGTSGATPLLLHHYWRANG*
Ga0114363_11246952	3300008266	Freshwater, Plankton	MPTPSSVSAPTKGTPMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG*
Ga0114363_11828172	3300008266	Freshwater, Plankton	MMRYAFSATARPFGVLPSLALPVVSSHRQGLTWGSVDARTTIRAIAGQRGTSGATPLLLHHYRRANG*
Ga0114876_10510073	3300008448	Freshwater Lake	MMRYAFSAAARLVVLRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRGTSGATPLLLHHYRRANG*
Ga0114880_10686082	3300008450	Freshwater Lake	MMRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG*
Ga0114880_11008302	3300008450	Freshwater Lake	MRYDLRATARLVVLRSLSLPVVSSHRQGLSWGSVDACTTITAIAGQQGTSGATPLLLHHYWRANG*
Ga0114880_12642861	3300008450	Freshwater Lake	MRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG*
Ga0114880_12653781	3300008450	Freshwater Lake	MMRYDFCAAARLVALRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYRRANG*
Ga0105098_100268023	3300009081	Freshwater Sediment	MMRYAFSAAARLVVLRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYWRANG*
Ga0114962_100368946	3300009151	Freshwater Lake	MMRYDSCATARLMALRSLALPVVSSHRQGLPWGSVDARTTIMAIAGQRGTSGATPLLLHHYRRANG*
Ga0114963_103076352	3300009154	Freshwater Lake	MMRYDSCATARLMALRSLALPVVSSHRQGLPWGSVDACTTIMAIAGQRGTSGATPLLLHHDRRANG*
Ga0114977_100144349	3300009158	Freshwater Lake	MRYALWATARPFGVLLSLALPVESSHRQGLTWGSADACTTITAIAGQQRTSGATPLLLHHYRRANG*
Ga0114977_100899902	3300009158	Freshwater Lake	MMRYALSATARPFGVLLSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG*
Ga0114978_103366791	3300009159	Freshwater Lake	MMRYALSVTARPYGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGAT
Ga0114981_104769681	3300009160	Freshwater Lake	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRANG*
Ga0114966_101190643	3300009161	Freshwater Lake	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG*
Ga0114970_101724622	3300009163	Freshwater Lake	MMRYAFSATARPFGVLPSLALPMESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG*
Ga0114958_105311811	3300009684	Freshwater Lake	MMRYDSCATARLVALRSLALPVVSSHRQGLSWGSVDARTTIMAIAGQRGTSGATPLLLHHYRR
Ga0114958_105535232	3300009684	Freshwater Lake	MMRYDSCATACLMALRSLALPVVSSHRQGLPWGSVDARTTIMAIAGQRGTSGATPLLL
Ga0114964_100646614	3300010157	Freshwater Lake	MMRYDSCATARLMALRSLALPVVSSHRQGLPWGSVDARTTIMAIAGQRGTSGATPLLLHHDRRANG*
Ga0129324_104211401	3300010368	Freshwater To Marine Saline Gradient	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPHLLHHYRR
Ga0129336_103674513	3300010370	Freshwater To Marine Saline Gradient	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHY
Ga0151514_1010159	3300011115	Freshwater	MRYDLRATARLVVLRSLSLPVVSSHRQGLLWGSVDARTTIMAIAGQRGTSGATPLLLHHYWRANG*
Ga0153800_10196051	3300011995	Freshwater	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTTMAIAGQQGTSGATPLLLHHYRRANG*
Ga0164293_102220672	3300013004	Freshwater	MMRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTIITAIAGQQGTSGATPLLLHHYRRANG*
Ga0164293_106207002	3300013004	Freshwater	MMRYAFSATARPFGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYRRANG*
Ga0164292_101546824	3300013005	Freshwater	MMRYAFSATARPFGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHY
Ga0177922_104515502	3300013372	Freshwater	MMRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWR
Ga0177922_107324151	3300013372	Freshwater	MMRYAFSATARPFGVLQSLALPVESSHRQGLTWGSLDACTTITAIAGQQGTSGATPLLLHHYRRANG*
Ga0177922_109039932	3300013372	Freshwater	MMRYAFWATARPFGVLQSLALPVESSHRQGLIWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG*
Ga0181364_10080572	3300017701	Freshwater Lake	MMRYASFATARPFGVLPSLALPVESSHRQGLTWGSLDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0181350_11293942	3300017716	Freshwater Lake	MMRYASFATARPFGVLPSLALPVESSHRQGLTWGSADACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0181347_11004341	3300017722	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLH
Ga0181365_10375453	3300017736	Freshwater Lake	MMRYASCATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0181356_11663842	3300017761	Freshwater Lake	MMRYAFSATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQGTSGATPLLLHHYWRANG
Ga0181348_10873293	3300017784	Freshwater Lake	MMRYAFSATARPFGVLQSLALPVESSHRQGLIWGSVDARTTITAIAGQRETSGATPLLLHHDRRANG
Ga0181355_10668503	3300017785	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSLDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0181355_11382951	3300017785	Freshwater Lake	MMRYAFSAAARLVVLRPLALPVVSSHRQGLTWGSVDACTTITAIAGQQGTSGATPLL
Ga0181355_13698701	3300017785	Freshwater Lake	MRYDSAATARPFGVLPSLALPMESSHWQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRR
Ga0181359_10094813	3300019784	Freshwater Lake	MMRYAFSATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG
Ga0181359_10272412	3300019784	Freshwater Lake	MMRYAFSAAARLVVLRPLALPVVSSHRQGLTWGSADALTTIMAIAGQRGTSGATPLLLHHYWRANG
Ga0181359_10956682	3300019784	Freshwater Lake	MMRYASFATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0181359_11240372	3300019784	Freshwater Lake	MMRYDARVSAHSLLRSLCLPVVSSHRQALTWGSVDAPTTMMAIAGQGETSGATPLLLHHYRRAHG
Ga0211732_10425702	3300020141	Freshwater	MMRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRANG
Ga0211732_10662773	3300020141	Freshwater	MSTPSSLSAPTKDTAMMRYDARVSAHSLLRSLCLPVVSSHRQALTWGSVDACNTRFAGQQGTSGATPLLLHHY
Ga0211733_104534892	3300020160	Freshwater	MMRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG
Ga0211731_114255862	3300020205	Freshwater	MRYALPATARPFGVLLSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0208360_10213622	3300020551	Freshwater	MRYDSCATARPFGVLPSLALPVVSSHRQGLTWGSVDALTTIMAIAGQRETSGATPLLLHHYWRANG
Ga0222714_100475435	3300021961	Estuarine Water	MRYDLRATARLVVLRSLSLPVVSSHRQGLLWGSVDAPTTTMAIAGQGGTSGATPLLLHHYWRTNG
Ga0222714_106637952	3300021961	Estuarine Water	TPSSVSAPTKGTTMMRYDALVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0222713_103866072	3300021962	Estuarine Water	MPTPSSVSAPTKGTTMMRYDALVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0222712_103510122	3300021963	Estuarine Water	MSAASSVSTPTKGQTMMRYDARVSAHSLLRSLCLPVVSSHRQALTWGSVDAPTTMMAIAGQGETSGATPLLLHHYRRAHG
Ga0181353_10224965	3300022179	Freshwater Lake	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0181354_10717404	3300022190	Freshwater Lake	YAFWATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGAIPLLLHHYRRANG
Ga0214917_1000640917	3300022752	Freshwater	MRYDSWATARPYGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRGTSGATPLLLHHYRRANG
Ga0214917_100459426	3300022752	Freshwater	MRYDLTATARPYGVLPSLALPVVSSHRQGLTWGSADARTTIMAIAGQRGTSGATPLLLHHYWRANG
Ga0214921_1000262135	3300023174	Freshwater	MRYDSCAAARLMALRSLALPVVSSHRQGLPWGSVDARTTIMAIAGQRGTSGATPLLLHHDRRANG
Ga0214921_1001911815	3300023174	Freshwater	MRYDLTATARPYGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRGTSGATPLLLHHYWRANG
Ga0208916_101786392	3300025896	Aqueous	MRYDQRAAARLVVLRSLTLPLVSSQRQGLLWGSVDARTTTTAMPGQRGTSGATPLLLHHYWRANG
Ga0209552_10035836	3300027563	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG
Ga0209651_10901831	3300027581	Freshwater Lake	QDSRMMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG
Ga0209651_10901981	3300027581	Freshwater Lake	QDSRMMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG
Ga0208974_10328532	3300027608	Freshwater Lentic	MLGRHMSASRSVSTPTKGQTMMRYDARVSAHSLLRSLCLPVVSSHRQALTWGSVDAPTTMMAIAGQGETSGATPLLLHHYRRAHG
Ga0209357_10333774	3300027656	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG
Ga0209553_12413371	3300027688	Freshwater Lake	MMRYASFATARPFGVLPSLALPMESSRRQGLTWGSVDARTTNMPIGGQRETSGATPLLLHHYWRANG
Ga0209443_10436615	3300027707	Freshwater Lake	MMRYAFWATARPFGVLQSLALPVESSHRQGLIWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG
Ga0209499_10129766	3300027712	Freshwater Lake	MMRYDSCATARLMALRSLALPVVSSHRQGLPWGSVDACTTIMAIAGQRGTSGATPLLLHHDRRANG
Ga0209499_12435292	3300027712	Freshwater Lake	MMRYDSCATARLVALRSLALPVVSSHRQGLSWGSVDARTTIMAIAGQRGTSGATPLLLHHYRRA
Ga0209297_10169189	3300027733	Freshwater Lake	MRYALWATARPFGVLLSLALPVESSHRQGLTWGSADACTTITAIAGQQRTSGATPLLLHHYRRANG
Ga0209190_11284982	3300027736	Freshwater Lake	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG
Ga0209190_11701132	3300027736	Freshwater Lake	MMRYAFSATARPFGVLPSLTLPVESSHRQGLTWGSVDARTTNMPIGGQRETSGATPLLLHHYWRTNG
Ga0209972_1000090720	3300027793	Freshwater Lake	MRYDSCATARPFGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYRRANG
Ga0209985_104819262	3300027806	Freshwater Lake	MRYDSCATARPFGVLPSLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHH
Ga0209820_10213123	3300027956	Freshwater Sediment	MMRYAFSAAARLVVLRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYWRANG
Ga0209299_10573453	3300027974	Freshwater Lake	MRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRANG
Ga0315288_105276881	3300031772	Sediment	MMRYDLSATARPFGVLQSLALPVESSHRQGLTWGSVDARTTITAIAGQRETSGATPLLLHHYRRANG
Ga0315900_101669591	3300031787	Freshwater	MMRYALSATARPFGVLLSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0315909_102393882	3300031857	Freshwater	MMRYAFSAAARLVVLRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRGTSGATPLLLHHYRRANG
Ga0315909_102560014	3300031857	Freshwater	RWRRRPRANMLGWHMPTPSSVSAPTKGTPMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0315909_102673503	3300031857	Freshwater	MRYDLRAAARLVVLRSLTLPLVSSQRQGLLWGSVDARTTTTAMPGQRGTSGATPLLLHHYWRANG
Ga0315285_103628363	3300031885	Sediment	MMRYDLSATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHDRRANG
Ga0315278_102763795	3300031997	Sediment	MMRYAFSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG
Ga0315274_102323652	3300031999	Sediment	MMRYDLSATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG
Ga0315903_111334762	3300032116	Freshwater	MPTPSSVSAPTKGTPMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0315295_112794811	3300032156	Sediment	TPPSVATSTQDLRMMRYDLSATARPFGVLQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG
Ga0315287_103506352	3300032397	Sediment	MMRYDLSATARPFGVRQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHDRRANG
Ga0315273_126437652	3300032516	Sediment	LLGSDLPTPPSVATSTQDLRMMRYAFSATARPFGVQQSLALPVESSHRQGLTWGSVDACTTTMAIAGQQETSGATPLLLHHYRRANG
Ga0334980_0328720_166_408	3300033816	Freshwater	MPTPSSLSAPTKGTPMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0334982_0273104_557_757	3300033981	Freshwater	MRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0334994_0053637_717_917	3300033993	Freshwater	MRYASSATARPFGVLPSLALPVESSHRQGLTWGSADACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0334994_0104442_1340_1582	3300033993	Freshwater	MPTPSSVSAPTKGTTMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0334994_0158463_566_766	3300033993	Freshwater	MMRYDFSAAARLVVLRPLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0334979_0130052_566_766	3300033996	Freshwater	MMRYAFSAAARLVVLRPLALPVVSSHRQGLSWGSVDARTTIRAIAGQRGTSGATPLLLHHYRRANG
Ga0334983_0423822_600_761	3300034060	Freshwater	MRYASSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGAT
Ga0334995_0024189_5163_5345	3300034062	Freshwater	MMRYDFCAAARLVALRPLALPVVSSHRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHH
Ga0335027_0018524_3080_3322	3300034101	Freshwater	MSTPSSVSAPTKGTTMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0335027_0645118_395_637	3300034101	Freshwater	PTSIRVAAPTKGGKVMRYDSCAAARLVALRPLALPLVSSQRQGLTWGSVDARTTIMAIAGQRQTSGATPLLLHHYRRANG
Ga0335031_0051426_2804_2968	3300034104	Freshwater	GVLPSLALPVVSSHRQGLTWGSVDALTTIMAIAGQRETSGATPLLLHHYWRANG
Ga0335031_0064107_293_493	3300034104	Freshwater	MRYALLATARPFGVLLSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYRRANG
Ga0335031_0653673_2_172	3300034104	Freshwater	MRYASSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLL
Ga0335035_0164762_410_610	3300034105	Freshwater	MRYASSATARPFGVLPSLALPVESSHRQGLTWGSADACTTITAIAGQQGTSGATPLLLHHYRRANV
Ga0335063_0350193_42_284	3300034111	Freshwater	MPTPSGVSAPTKGTTMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG
Ga0335053_0038624_3258_3428	3300034118	Freshwater	MMRYALSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPL
Ga0335060_0064071_320_520	3300034122	Freshwater	MRYASSATARPFGVLPSLALPVESSHRQGLTWGSVDACTTITAIAGQQGTSGATPLLLHHYWRTNG
Ga0335007_0185577_304_546	3300034283	Freshwater	MSTPSGVSAPTKGTTMMRYASLVSAHSLLRSLCLPVVSSHRQALTWGSVDAPKTIMAIAGQGETSGATPLLLHHYRRAHG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066571

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences