Metagenome / Metatranscriptome Family F066552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	47 residues
Representative Sequence	DIYNLLNSDAVTAYNNGYSPTGAWLTPTAILPARYVRLNLQLDF
Number of Associated Samples	98
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.83 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.778 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.698 % of family members)
Environment Ontology (ENVO)	Unclassified (39.683 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.873 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.44% β-sheet: 5.56% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF07883	Cupin_2	15.87
PF13620	CarboxypepD_reg	12.70
PF01177	Asp_Glu_race	5.56
PF07399	Na_H_antiport_3	5.56
PF12867	DinB_2	3.17
PF01555	N6_N4_Mtase	1.59
PF11412	DsbC	1.59
PF00753	Lactamase_B	0.79
PF00069	Pkinase	0.79
PF01569	PAP2	0.79
PF00775	Dioxygenase_C	0.79
PF03737	RraA-like	0.79
PF02720	DUF222	0.79
PF00135	COesterase	0.79
PF07637	PSD5	0.79
PF02311	AraC_binding	0.79
PF01186	Lysyl_oxidase	0.79
PF01699	Na_Ca_ex	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.17
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.59
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.59
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.59
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.79
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.79
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.79
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.79
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.78 %
Unclassified	root	N/A	22.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.78 %
Unclassified	root	N/A	22.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.78 %
Unclassified	root	N/A	22.22 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.48 %
Unclassified	root	N/A	22.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.29 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.59 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	1.59 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Pelagibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium	1.59 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.59 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.79 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.79 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Pelagibacterium halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1.59 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.59 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.79 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.79 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Pelagibacterium halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1.59 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.59 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.79 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.79 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.29 %
Pelagibacterium halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1.59 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.59 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.79 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.79 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100695139	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300000891\|JGI10214J12806_10754833	Not Available	1423	Open in IMG/M
3300004463\|Ga0063356_101799075	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300004463\|Ga0063356_101908510	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300004463\|Ga0063356_106468354	Not Available	502	Open in IMG/M
3300005328\|Ga0070676_10750869	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300005330\|Ga0070690_100754323	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005334\|Ga0068869_100180554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1654	Open in IMG/M
3300005339\|Ga0070660_101031756	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005354\|Ga0070675_101152100	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005355\|Ga0070671_101552638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005364\|Ga0070673_101183368	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005438\|Ga0070701_11234057	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005459\|Ga0068867_101704412	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005466\|Ga0070685_10557154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300005471\|Ga0070698_100958298	Not Available	802	Open in IMG/M
3300005544\|Ga0070686_100241718	All Organisms → cellular organisms → Bacteria → Acidobacteria	1315	Open in IMG/M
3300005546\|Ga0070696_101844754	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300005549\|Ga0070704_101423591	Not Available	636	Open in IMG/M
3300005615\|Ga0070702_100469562	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300005719\|Ga0068861_101690743	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300005840\|Ga0068870_11386359	Not Available	515	Open in IMG/M
3300005841\|Ga0068863_101731725	Not Available	635	Open in IMG/M
3300005841\|Ga0068863_102146198	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300005844\|Ga0068862_100546184	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005844\|Ga0068862_102648820	Not Available	513	Open in IMG/M
3300006844\|Ga0075428_100430048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1414	Open in IMG/M
3300006844\|Ga0075428_100527904	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300006845\|Ga0075421_102519145	Not Available	536	Open in IMG/M
3300006876\|Ga0079217_10904219	Not Available	630	Open in IMG/M
3300006880\|Ga0075429_101537992	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006894\|Ga0079215_10051658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1598	Open in IMG/M
3300006894\|Ga0079215_10537840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300006894\|Ga0079215_11072641	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300006904\|Ga0075424_101543431	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009094\|Ga0111539_11563811	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009098\|Ga0105245_11837757	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300009100\|Ga0075418_11763074	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300009147\|Ga0114129_10013273	All Organisms → cellular organisms → Bacteria	11736	Open in IMG/M
3300009147\|Ga0114129_11675444	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300009148\|Ga0105243_11180870	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300009156\|Ga0111538_10041090	All Organisms → cellular organisms → Bacteria	5956	Open in IMG/M
3300009156\|Ga0111538_10569856	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300009156\|Ga0111538_13381135	Not Available	554	Open in IMG/M
3300009162\|Ga0075423_10058550	All Organisms → cellular organisms → Bacteria	3983	Open in IMG/M
3300009176\|Ga0105242_12664940	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300010040\|Ga0126308_11235232	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300010047\|Ga0126382_11534481	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010397\|Ga0134124_10162067	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300010397\|Ga0134124_12555491	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300010400\|Ga0134122_10548577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Pelagibacterium → Pelagibacterium halotolerans	1057	Open in IMG/M
3300010401\|Ga0134121_10711512	Not Available	954	Open in IMG/M
3300010403\|Ga0134123_11709525	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300011119\|Ga0105246_10499228	All Organisms → cellular organisms → Bacteria → Acidobacteria	1033	Open in IMG/M
3300011119\|Ga0105246_12052827	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300011119\|Ga0105246_12148356	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300011398\|Ga0137348_1050312	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300011415\|Ga0137325_1030674	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300011441\|Ga0137452_1246940	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300011443\|Ga0137457_1112470	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300011443\|Ga0137457_1205987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012510\|Ga0157316_1040782	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012511\|Ga0157332_1049129	Not Available	600	Open in IMG/M
3300012907\|Ga0157283_10085273	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300012908\|Ga0157286_10130121	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300013307\|Ga0157372_11770745	Not Available	710	Open in IMG/M
3300014969\|Ga0157376_11190280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300014969\|Ga0157376_12478467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300015200\|Ga0173480_10564262	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300015372\|Ga0132256_103496263	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300015373\|Ga0132257_101785727	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300015373\|Ga0132257_101810471	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300015373\|Ga0132257_103407616	Not Available	579	Open in IMG/M
3300015374\|Ga0132255_101499356	Not Available	1020	Open in IMG/M
3300018469\|Ga0190270_12112391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300018476\|Ga0190274_10125181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2110	Open in IMG/M
3300018476\|Ga0190274_10246032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1617	Open in IMG/M
3300018476\|Ga0190274_10615545	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300018476\|Ga0190274_12717167	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300018476\|Ga0190274_13766423	Not Available	513	Open in IMG/M
3300018481\|Ga0190271_13146494	Not Available	553	Open in IMG/M
3300019356\|Ga0173481_10047090	Not Available	1467	Open in IMG/M
3300020034\|Ga0193753_10067415	All Organisms → cellular organisms → Bacteria → Acidobacteria	1863	Open in IMG/M
3300022911\|Ga0247783_1094435	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300025907\|Ga0207645_10802856	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300025907\|Ga0207645_10911388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300025920\|Ga0207649_10400064	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300025923\|Ga0207681_10798921	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300025923\|Ga0207681_10986316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300025926\|Ga0207659_10224802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1511	Open in IMG/M
3300025930\|Ga0207701_11269924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300025931\|Ga0207644_11269248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300025933\|Ga0207706_10442476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300025935\|Ga0207709_10819823	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300025940\|Ga0207691_10997255	Not Available	699	Open in IMG/M
3300025945\|Ga0207679_11173952	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300025949\|Ga0207667_11904476	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300025972\|Ga0207668_11042244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300026089\|Ga0207648_10333233	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300026089\|Ga0207648_10462509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300026089\|Ga0207648_11040417	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300026116\|Ga0207674_11129972	Not Available	753	Open in IMG/M
3300026118\|Ga0207675_100151568	All Organisms → cellular organisms → Bacteria	2207	Open in IMG/M
3300027665\|Ga0209983_1122370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	594	Open in IMG/M
3300027840\|Ga0209683_10084675	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300027873\|Ga0209814_10061364	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300027880\|Ga0209481_10646320	Not Available	549	Open in IMG/M
3300027886\|Ga0209486_10354146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	879	Open in IMG/M
3300027909\|Ga0209382_11972685	Not Available	561	Open in IMG/M
3300031184\|Ga0307499_10132318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300031538\|Ga0310888_10069364	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300031538\|Ga0310888_10592307	Not Available	672	Open in IMG/M
3300031538\|Ga0310888_10672695	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300031562\|Ga0310886_10379006	Not Available	829	Open in IMG/M
3300031720\|Ga0307469_12334752	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031908\|Ga0310900_11120115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	652	Open in IMG/M
3300031913\|Ga0310891_10363672	Not Available	521	Open in IMG/M
3300031943\|Ga0310885_10087224	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300031943\|Ga0310885_10329572	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300032003\|Ga0310897_10597980	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300032013\|Ga0310906_10114477	Not Available	1508	Open in IMG/M
3300032075\|Ga0310890_10135765	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300032144\|Ga0315910_11441131	Not Available	537	Open in IMG/M
3300032157\|Ga0315912_10737386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	784	Open in IMG/M
3300033551\|Ga0247830_11525225	Not Available	535	Open in IMG/M
3300034672\|Ga0314797_106567	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.38%
Environmental	Environmental	47.62%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.38%
Terrestrial	Environmental → Terrestrial	42.86%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.25%
Sediment	Environmental → Aquatic → Sediment	3.97%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.49%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.49%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.17%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1006951392	3300000559	Soil	YNLLNNDAVTSYNNGYTAPTATRPSIWLTPTAILPARYVRLNMQLDF*
JGI10214J12806_107548331	3300000891	Soil	LLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0063356_1017990751	3300004463	Arabidopsis Thaliana Rhizosphere	AQFGVDVYNLTNTDVVTAYNTGYTAPTATAGSNWLTPTGILPARYVRLNMQLDF*
Ga0063356_1019085102	3300004463	Arabidopsis Thaliana Rhizosphere	AKILRIRGTRAQFGVDVYNLLNTDVVTTYNEGYTAPTATTGSIWLTPNSILPARYVRLNMQLDF*
Ga0063356_1064683541	3300004463	Arabidopsis Thaliana Rhizosphere	AQFGVDVYNLTNTDVVTAYNAGYIAPTATAGSNWLTPTGILPARYVRLNMQIDF*
Ga0070676_107508691	3300005328	Miscanthus Rhizosphere	RTQVGIDLYNILNNDAVTTYNNGYSPTGAWLTPTAILPARYVRFNLQLDF*
Ga0070690_1007543231	3300005330	Switchgrass Rhizosphere	TQFGVDLYNLLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0068869_1001805541	3300005334	Miscanthus Rhizosphere	DLYNLLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0070660_1010317562	3300005339	Corn Rhizosphere	TRAQIGVDIYNLLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF*
Ga0070675_1011521001	3300005354	Miscanthus Rhizosphere	GVDLYNLLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0070671_1015526381	3300005355	Switchgrass Rhizosphere	GMDVYNLLNTDVVTAYNQGYSAPTATRGSIWLTPTAILPARYVRLNVQIDF*
Ga0070673_1011833682	3300005364	Switchgrass Rhizosphere	VDVYNLLNTDVVTGYNNGYSPTGAWLTPTTIQPARYARLNLELNF*
Ga0070701_112340572	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VGVDIYNVLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF*
Ga0068867_1017044122	3300005459	Miscanthus Rhizosphere	VDVYNLLNTDVVTGYNNGYSATGAWLTPTAIQPARYARLNLEVNF*
Ga0070685_105571542	3300005466	Switchgrass Rhizosphere	DLYNLLNTDVVTAYNNGYTAPTATQGSIWLTPTAILPARYVRLNVQIDF*
Ga0070698_1009582982	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TQVGMDVYNVVNNDAVTMYNNGYTAPVAGRSSVWLTPTTILPARYIRLNMQFDF*
Ga0070686_1002417183	3300005544	Switchgrass Rhizosphere	VDVYNLLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELNF*
Ga0070696_1018447542	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ILHFGQTRAQFGVDIYNLTNTDVVTQYNNGYIAPSATQGSVWLTPNAILPARYVRLNMQIDF*
Ga0070704_1014235911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	YNLLNTDVVTAYNNGYTAPTATQGSIWLTPTAILPARYVRLNMQLDF*
Ga0070702_1004695621	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TRAQFGVDVYNLLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELNF*
Ga0068861_1016907432	3300005719	Switchgrass Rhizosphere	ILRFGKTRAQFGVDVYNLLNTDVVTGYNNGYSATGAWLTPTTIQPARYARLNLEVNF*
Ga0068870_113863591	3300005840	Miscanthus Rhizosphere	VTAYNNGYTAPTATQGSIWLTPTAILPARYVRLNMQLDF*
Ga0068863_1017317251	3300005841	Switchgrass Rhizosphere	RAQLGVDIYNVLNTDVVTLYNNGYSPTGTWLTPTAILPARYARFNMQFDF*
Ga0068863_1021461982	3300005841	Switchgrass Rhizosphere	QFGVDVYNLLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELSF*
Ga0068862_1005461841	3300005844	Switchgrass Rhizosphere	GVDVYNLLNTDVVTTYNEGYTAPTATSGSIWLTPNSILPARYVRLNLQLDF*
Ga0068862_1026488202	3300005844	Switchgrass Rhizosphere	YNNGYTAPAAGRSSVWLTPTTILPARYIRLNMQVDF*
Ga0075428_1004300483	3300006844	Populus Rhizosphere	AVTMYNNGYSPTGAWLTPTAILPARYVRLNMQLDF*
Ga0075428_1005279041	3300006844	Populus Rhizosphere	DVVTLYNNGYSAPTATRGSIWLTPTAILPARYVRLNMQMDF*
Ga0075421_1025191451	3300006845	Populus Rhizosphere	NLLNTDVVTSYNNGYSAPTATGGSIWLTPTAILPARYVRLNMQFDF*
Ga0079217_109042192	3300006876	Agricultural Soil	FRFRGARAQIGVDIYNVLNNDVVTAYNNGYSPTGAWLTPTAILPARYARFNLQFDF*
Ga0075429_1015379922	3300006880	Populus Rhizosphere	LLNTDVVTLYNNGYSAPTATRGSIWLTPTAILPARYVRLNMQMDF*
Ga0079215_100516581	3300006894	Agricultural Soil	NLLNNDVVTTYNNGYTAPVAGRGSIWLTPTAILPARYARINLQVDF*
Ga0079215_105378401	3300006894	Agricultural Soil	KVLRIAGTRTQVGVDVYNLMNTDAVTGFNAGYSPTGAWLTPTAIVPARYARFNMQVDF*
Ga0079215_110726412	3300006894	Agricultural Soil	NIGVRVARVLRCGGTRAQVGVDVYNVMNTDAVTSFNNGYSPTGAWLTPTGIAPARYARINVQLDF*
Ga0075424_1015434311	3300006904	Populus Rhizosphere	TQYNNGYIAPNAQTGAPSTWLTPNAILPARYVRLNMQIDF*
Ga0111539_115638111	3300009094	Populus Rhizosphere	TTYNEGYTAPTATSGSIWLTPNSILPARYVRLNLQLDF*
Ga0105245_118377571	3300009098	Miscanthus Rhizosphere	KTRAQFGVDVYNLLNTDVVTGYNNGYSATGAWLTPTTIQPARYARLNLEVNF*
Ga0075418_117630742	3300009100	Populus Rhizosphere	YNNGYIAPTATSGSVWLTPTTILPARYVRLNMQIDF*
Ga0114129_100132731	3300009147	Populus Rhizosphere	RFRGYRTQIGVDIYNVVNTDVVTAYNNGYSPTGAWLTPTAILPARYARFNLQFDF*
Ga0114129_116754442	3300009147	Populus Rhizosphere	FGVDIYNLTNNDVVTGYNNGYIAPTATSGSVWLTPTSILPARYVRLNMQIDF*
Ga0105243_111808701	3300009148	Miscanthus Rhizosphere	LLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELSF*
Ga0111538_100410901	3300009156	Populus Rhizosphere	YNEGYTAPTATSGSIWLTPNSILPARYVRLNMQLDF*
Ga0111538_105698562	3300009156	Populus Rhizosphere	RGTRAQFGVDVYNLLNTDVVTMYNEGYTAPTATSGSIWLTPNSILPARYVRLNLQLDF*
Ga0111538_133811351	3300009156	Populus Rhizosphere	TDVVTTYNEGYTAPTATSGSIWLTPNSILPARYVRLNMQLDF*
Ga0075423_100585503	3300009162	Populus Rhizosphere	LTNTDVVTQYNNGYIAPNAQTGAPSTWLTPNAILPARYVRLNMQIDF*
Ga0105242_126649401	3300009176	Miscanthus Rhizosphere	RAQFGVDVYNLLNTDVVTGYNNGYSATGAWLTPTAIQPARYARLNLEVNF*
Ga0126308_112352321	3300010040	Serpentine Soil	DVVTGYNNGYSATGAWLTPTSIQPARYARLNLEVNF*
Ga0126382_115344812	3300010047	Tropical Forest Soil	FGGTRAQFGADVYNLLNTDVTTLYNNGYTAPTATSPSIWLTPNAILPARYVRLNMQLDF*
Ga0134124_101620671	3300010397	Terrestrial Soil	GHTRAQFGVDVYNLLNSDVVTGYNNGYSATGAWLTPTSITPARYARLNLEMNF*
Ga0134124_125554912	3300010397	Terrestrial Soil	LNSDVVTGYNNGYSATGAWLTPTSITPARYARLNLEVSF*
Ga0134122_105485773	3300010400	Terrestrial Soil	GIDLYNILNNDAVTTYNNGYSPTGAWLTPTAILPARYVRFNLQLDF*
Ga0134121_107115121	3300010401	Terrestrial Soil	KIFRFSGTRAQIGVDIYNLLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF*
Ga0134123_117095252	3300010403	Terrestrial Soil	RAQFGVDIYNVTNTDVVTLYNNGYIAPTGTNPSVWLTPNAILTARYARLNMQIDF*
Ga0105246_104992281	3300011119	Miscanthus Rhizosphere	RAQFGVDVYNLLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELNF*
Ga0105246_120528271	3300011119	Miscanthus Rhizosphere	VYNLLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELSF*
Ga0105246_121483561	3300011119	Miscanthus Rhizosphere	GTRINNLLNSDAVTSYDNGDSHNNGYTRPTVNRRLGSTWLTPTAILPARCVRLNLQLDF*
Ga0137348_10503122	3300011398	Soil	QFGVDVYNMLNTDVVTGYNNGYSPTGAWLTPTSIQPARYARLNLELNF*
Ga0137325_10306744	3300011415	Soil	GLDLYNLLNNDVVTAYNNGYNPTGAWLIPNTILPARYVRLNLQLDF*
Ga0137452_12469402	3300011441	Soil	KILRFRGYRTQIGVDIYNVVNTDVVTAYNTGYSPTGAWLTPTAILPARYARFNLQFDF*
Ga0137457_11124702	3300011443	Soil	AQFGVDVYNLLNTDVVTTYNEGYTAPTATSGSIWLTPNSILPARYVRLNMQLDF*
Ga0137457_12059871	3300011443	Soil	MDVYNLLNTDVVTAYNQGYSAPTATRGSIWLTPTAILPARYVRLNVQIDF*
Ga0157316_10407822	3300012510	Arabidopsis Rhizosphere	LNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0157332_10491292	3300012511	Soil	QFGVDLYNLLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0157283_100852733	3300012907	Soil	GVDVYNLLNTDVVTGYNNGYSPTGAWLTPTTIQPARYARLNMELNF*
Ga0157286_101301212	3300012908	Soil	VDVYNLLNTDVVTGYNNGYSPTGAWLTPTTIQPARYARLNMELNF*
Ga0157372_117707452	3300013307	Corn Rhizosphere	VTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF*
Ga0157376_111902802	3300014969	Miscanthus Rhizosphere	VDVYNLLNTDVVTTYNEGYTAPTATSGSIWLTPNSILPARYVRLNMQLDF*
Ga0157376_124784672	3300014969	Miscanthus Rhizosphere	VTGYNNGYSPTGAWLTPTAIQPARYVRLNLEVNF*
Ga0173480_105642622	3300015200	Soil	YNILNNDAVTTYNNGYSPTGAWLTPTAILPARYVRFNLQLDF*
Ga0132256_1034962631	3300015372	Arabidopsis Rhizosphere	TQFGVDVHNLLNSDVVTGYKNGYSATGAWLTPTAITPARYARLSLELSF*
Ga0132257_1017857271	3300015373	Arabidopsis Rhizosphere	DIYNLLNSDAVTAYNNGYSPTGAWLTPTAILPARYVRLNLQLDF*
Ga0132257_1018104711	3300015373	Arabidopsis Rhizosphere	TNTDVVTAYNNGYTPPTATQPSNWLTPTAILPARYVRLNMQIDF*
Ga0132257_1034076162	3300015373	Arabidopsis Rhizosphere	FGGTRAQFGADVYNLLNTDVVTTYNTGYTAPTATNPSIWLTPNAILPARYVRLNLQVDF*
Ga0132255_1014993561	3300015374	Arabidopsis Rhizosphere	GMDVYNVMNNDAVTAYNNGYTAPTAGRPSVWLTPTTILPARYIRLNMQIDF*
Ga0190270_121123911	3300018469	Soil	VVTAYNTGYSPTGAWLTPTAILPARYARFNLQLDF
Ga0190274_101251811	3300018476	Soil	RFRGTRAQVGMDVYNLLNTDVVTAYNQGYSAPTATQGSIWLTPTAILPARYVRLNVQIDF
Ga0190274_102460321	3300018476	Soil	AQFGVDVYNLLNTDVVTGYNNGYSPTGAWLTPTAIQPARYARLNLELNF
Ga0190274_106155451	3300018476	Soil	TTYNNGYSAPTVTQGSIWLTPNAILPARYVRLNMQLDF
Ga0190274_127171672	3300018476	Soil	VDVYNLLNTDVVTGYNNGYSPTGAWLTPTAIQPARYARLNLELDF
Ga0190274_137664231	3300018476	Soil	NLLNTDVVTMYNNGYSAPTATGGSLWLTPTAILPARYVRLNMQIDF
Ga0190271_131464942	3300018481	Soil	AYNQGYSAPTATQGSIWLTPNAILPARYVRLNMQIDF
Ga0173481_100470902	3300019356	Soil	YNLLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF
Ga0193753_100674151	3300020034	Soil	LLNTDVVTGYNNGYSPTGAWLTPTAIQPARYARLNLEINF
Ga0247783_10944351	3300022911	Plant Litter	QFGVDVYNLLNTDVVTGYNNGYSPTGAWLTPTTIQPARYARLNMELNF
Ga0207645_108028562	3300025907	Miscanthus Rhizosphere	QFGVDVYNLLNTDVVTGYNNGYSPTGAWLTPTAIQPARYARLNLEVNF
Ga0207645_109113881	3300025907	Miscanthus Rhizosphere	FRGTRAQVGMDVYNLLNTDVVTAYNQGYSAPTATQGSIWLTPTAILPARYVRLNVQVDF
Ga0207649_104000642	3300025920	Corn Rhizosphere	LLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF
Ga0207681_107989212	3300025923	Switchgrass Rhizosphere	NILNNDAVTTYNNGYSPTGAWLTPTAILPARYVRFNLQLDF
Ga0207681_109863162	3300025923	Switchgrass Rhizosphere	LLNTDVVTGYNNGYSPTGSWLTPTSIQPARYARLNLELNF
Ga0207659_102248021	3300025926	Miscanthus Rhizosphere	LLNTDVVTGYNNGYSATGAWLTPTAIQPARYARLNLELNF
Ga0207701_112699242	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RAQVGMDVYNLLNTDVVTAYNQGYSAPTATQGSIWLTPTAILPARYVRLNVQIDF
Ga0207644_112692482	3300025931	Switchgrass Rhizosphere	QVGMDVYNLLNTDVVTAYNQGYSAPTATRGSIWLTPTAILPARYVRLNVQIDF
Ga0207706_104424763	3300025933	Corn Rhizosphere	QVGIDLYNILNNDAVTTYNNGYSPTGAWLTPTAILPARYVRFNLQLDF
Ga0207709_108198231	3300025935	Miscanthus Rhizosphere	LLNSDVVTGYNNGYSATGAWLTPTAITPARYARLNLELSF
Ga0207691_109972552	3300025940	Miscanthus Rhizosphere	MDVYNLTNTDVVTGYNQNYTAPTGGRGSVWLTPTTIQPARYIRLNLQIDF
Ga0207679_111739522	3300025945	Corn Rhizosphere	NVLNTDVVTLYNNGYSPTGTWLTPTAILPARYARFNMQFDF
Ga0207667_119044762	3300025949	Corn Rhizosphere	RAQIGVDIYNLLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF
Ga0207668_110422441	3300025972	Switchgrass Rhizosphere	ILRFRGTRAQFGVDVYNLLNTDVVTTYNEGYTAPTATSGSIWLTPNAILPARYVRLNLQVDF
Ga0207648_103332333	3300026089	Miscanthus Rhizosphere	GTRAQLGVDIYNVLNTDVVTLYNNGYSPTGTWLTPTAILPARYARFNMQFDF
Ga0207648_104625091	3300026089	Miscanthus Rhizosphere	VDVYNLLNTDVVTGYNNGYSATGAWLTPTAIQPARYARLNLEVNF
Ga0207648_110404172	3300026089	Miscanthus Rhizosphere	LNTDVVTTYNEGYTAPTATSGSIWLTPNSILPARYVRLNLQLDF
Ga0207674_111299721	3300026116	Corn Rhizosphere	NVLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF
Ga0207675_1001515683	3300026118	Switchgrass Rhizosphere	TRAQIGVDIYNLLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF
Ga0209983_11223701	3300027665	Arabidopsis Thaliana Rhizosphere	YNLINTDVVTAYNNGYSPTGAWLTPTAILPARYARFNVQFDF
Ga0209683_100846751	3300027840	Wetland Sediment	DIYNLMNSDVVTTYNNGYTPPNPVTGAGSTWLTPTAITPARYARLNLQFDF
Ga0209814_100613642	3300027873	Populus Rhizosphere	NTGYSAPQADRGSIWLTPNAILPARYVRLNMQIDF
Ga0209481_106463201	3300027880	Populus Rhizosphere	VTTYNEGYSAPTATSGSIWLTPNAILPARYVRLNMQLDF
Ga0209486_103541463	3300027886	Agricultural Soil	TDAVTGFNNGYSPTGAWLTPTSIVPARYARFNMQVDF
Ga0209382_119726851	3300027909	Populus Rhizosphere	VVTAYNNGYSPTGAWLTPTAILPARYARFNLQFDF
Ga0307499_101323182	3300031184	Soil	GTRAQVGMDVYNLLNTDVVTAYNQGYSAPTATRGSIWLTPTAILPARYVRLNVQIDF
Ga0310888_100693643	3300031538	Soil	LRFRGVRTQVGVDIYNVLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNLQLDF
Ga0310888_105923072	3300031538	Soil	VYNLLNTDVVTTYNQGYTAPTATTGSIWLTPNAIQPARYVPLNMQLDF
Ga0310888_106726951	3300031538	Soil	GVDLYNLLNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNMQLDF
Ga0310886_103790062	3300031562	Soil	YNQGYTAPTATTGSIWLTPNAIQPARYVPLNMQLDF
Ga0307469_123347521	3300031720	Hardwood Forest Soil	VTAYNNGYSAPTATQGSIWLTPTAILPARYVRLNMQIDF
Ga0310900_111201152	3300031908	Soil	LRFRGTRAQVGVDIYNVLNTDVVTLYNNGYSPTGAWLTPTAILPARYARFNMQFDF
Ga0310891_103636721	3300031913	Soil	VDVYNLLNTDVVTTYNQGYTAPTATTGSIWLTPNAIQPARYVPLNMQLDF
Ga0310885_100872241	3300031943	Soil	IGVDIYNVVNTDVVTAYNNGYSPTGAWLTPTAILPARYARFNLQFDF
Ga0310885_103295722	3300031943	Soil	VTTYNEGYTAPTATTGSIWLTPNSILPARYVRLNMQLDF
Ga0310897_105979802	3300032003	Soil	TQFGVDVYNLLNTDVVTGYNNGYSATGAWLTPTSITPARYARLNLELNF
Ga0310906_101144771	3300032013	Soil	LNSDAVTMYNNGYSPTGAWLTPTAILPARYVRLNLQLDF
Ga0310890_101357652	3300032075	Soil	RAQFGVDVYNLLNTDVVTTYNEGYTAPTATSGSIWLTPNSILPARYVRLNLQLDF
Ga0315910_114411311	3300032144	Soil	RMQFGADVYNLLNTDVVTMYNNGYSAPTATRGSIWLTPTAILPARYVRLNMQLDF
Ga0315912_107373861	3300032157	Soil	YNLLNNDAVTLYNNGYSPTGAWLTPTAILPARYVRLNLQLDF
Ga0247830_115252252	3300033551	Soil	YNQGYSAPTATQGSIWLTPNAILPARYVRLNMQIDF
Ga0314797_106567_420_581	3300034672	Soil	GQTRTQFGVDLYNLLNSDAVTMYNNGYSATGAWLTPTAILPARYVRLNLQLDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences