Metagenome Family F066533

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066533
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	69 residues
Representative Sequence	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFAKP
Number of Associated Samples	57
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.40 %
% of genes near scaffold ends (potentially truncated)	34.13 %
% of genes from short scaffolds (< 2000 bps)	78.57 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (63.492 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (53.175 % of family members)
Environment Ontology (ENVO)	Unclassified (64.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.540 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.55% β-sheet: 0.00% Coil/Unstructured: 48.45%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13590	DUF4136	24.60
PF04261	Dyp_perox	6.35
PF01817	CM_2	3.97
PF08281	Sigma70_r4_2	3.17
PF00210	Ferritin	3.17
PF00206	Lyase_1	2.38
PF00196	GerE	2.38
PF07690	MFS_1	2.38
PF16694	Cytochrome_P460	2.38
PF10604	Polyketide_cyc2	2.38
PF01244	Peptidase_M19	1.59
PF02566	OsmC	1.59
PF00072	Response_reg	0.79
PF00390	malic	0.79
PF14833	NAD_binding_11	0.79
PF00930	DPPIV_N	0.79
PF00926	DHBP_synthase	0.79
PF01610	DDE_Tnp_ISL3	0.79
PF12697	Abhydrolase_6	0.79
PF13193	AMP-binding_C	0.79
PF12833	HTH_18	0.79
PF00561	Abhydrolase_1	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	6.35
COG1605	Chorismate mutase	Amino acid transport and metabolism [E]	3.97
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.59
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.59
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	1.59
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.79
COG0281	Malic enzyme	Energy production and conversion [C]	0.79
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.79
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.79
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.49 %
Unclassified	root	N/A	36.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.49 %
Unclassified	root	N/A	36.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.49 %
Unclassified	root	N/A	36.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.87 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.87 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	4.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	4.76 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3.97 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	2.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4.76 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	2.38 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	2.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16935001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12127	Open in IMG/M
2228664022\|INPgaii200_c1153433	Not Available	532	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101396884	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300000955\|JGI1027J12803_100788500	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300000955\|JGI1027J12803_101087854	Not Available	674	Open in IMG/M
3300004268\|Ga0066398_10028924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	998	Open in IMG/M
3300004268\|Ga0066398_10229621	Not Available	501	Open in IMG/M
3300004633\|Ga0066395_10038021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2056	Open in IMG/M
3300005332\|Ga0066388_100066808	All Organisms → cellular organisms → Bacteria → Acidobacteria	3870	Open in IMG/M
3300005332\|Ga0066388_101552412	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005332\|Ga0066388_102135224	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005332\|Ga0066388_102565358	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005332\|Ga0066388_103669638	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005332\|Ga0066388_107019101	Not Available	567	Open in IMG/M
3300005468\|Ga0070707_102313404	Not Available	505	Open in IMG/M
3300005536\|Ga0070697_100044564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3594	Open in IMG/M
3300005764\|Ga0066903_100143818	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300005764\|Ga0066903_106919928	Not Available	589	Open in IMG/M
3300005983\|Ga0081540_1128399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1039	Open in IMG/M
3300006854\|Ga0075425_100931979	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300009792\|Ga0126374_10001616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6656	Open in IMG/M
3300009792\|Ga0126374_11160806	Not Available	616	Open in IMG/M
3300010043\|Ga0126380_10017234	All Organisms → cellular organisms → Bacteria → Acidobacteria	3389	Open in IMG/M
3300010043\|Ga0126380_10208917	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300010043\|Ga0126380_10375843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300010043\|Ga0126380_10610819	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300010043\|Ga0126380_10898565	Not Available	735	Open in IMG/M
3300010043\|Ga0126380_11517376	Not Available	594	Open in IMG/M
3300010046\|Ga0126384_10069469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2499	Open in IMG/M
3300010046\|Ga0126384_10176400	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	1670	Open in IMG/M
3300010046\|Ga0126384_10375766	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300010046\|Ga0126384_11031684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	750	Open in IMG/M
3300010047\|Ga0126382_10324887	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300010047\|Ga0126382_10473609	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300010047\|Ga0126382_10501172	Not Available	976	Open in IMG/M
3300010047\|Ga0126382_10652484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	875	Open in IMG/M
3300010048\|Ga0126373_10015578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6299	Open in IMG/M
3300010048\|Ga0126373_10027973	All Organisms → cellular organisms → Bacteria	4843	Open in IMG/M
3300010048\|Ga0126373_10385359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1423	Open in IMG/M
3300010048\|Ga0126373_10510326	Not Available	1246	Open in IMG/M
3300010048\|Ga0126373_11207144	Not Available	822	Open in IMG/M
3300010048\|Ga0126373_11219698	Not Available	818	Open in IMG/M
3300010048\|Ga0126373_11307422	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300010358\|Ga0126370_10056517	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300010358\|Ga0126370_11251908	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300010358\|Ga0126370_11255865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	692	Open in IMG/M
3300010358\|Ga0126370_11299248	Not Available	682	Open in IMG/M
3300010359\|Ga0126376_10120142	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300010359\|Ga0126376_10245556	All Organisms → cellular organisms → Bacteria → Acidobacteria	1519	Open in IMG/M
3300010359\|Ga0126376_10797810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	921	Open in IMG/M
3300010359\|Ga0126376_11352715	Not Available	735	Open in IMG/M
3300010359\|Ga0126376_12624535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	552	Open in IMG/M
3300010359\|Ga0126376_13152188	Not Available	510	Open in IMG/M
3300010360\|Ga0126372_11148251	Not Available	798	Open in IMG/M
3300010360\|Ga0126372_11626201	Not Available	685	Open in IMG/M
3300010360\|Ga0126372_12030092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	622	Open in IMG/M
3300010360\|Ga0126372_12412394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	576	Open in IMG/M
3300010360\|Ga0126372_12618866	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300010361\|Ga0126378_10059400	All Organisms → cellular organisms → Bacteria → Acidobacteria	3609	Open in IMG/M
3300010361\|Ga0126378_10086808	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300010362\|Ga0126377_11080448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	871	Open in IMG/M
3300010362\|Ga0126377_12731037	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300010366\|Ga0126379_10629230	All Organisms → cellular organisms → Bacteria → Acidobacteria	1161	Open in IMG/M
3300010366\|Ga0126379_11634822	Not Available	749	Open in IMG/M
3300010366\|Ga0126379_11659020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	744	Open in IMG/M
3300010366\|Ga0126379_12028134	Not Available	678	Open in IMG/M
3300010376\|Ga0126381_100054563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4911	Open in IMG/M
3300010376\|Ga0126381_100225247	All Organisms → cellular organisms → Bacteria → Acidobacteria	2524	Open in IMG/M
3300010376\|Ga0126381_100322215	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300010376\|Ga0126381_100446921	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300010376\|Ga0126381_100471672	Not Available	1764	Open in IMG/M
3300010376\|Ga0126381_102362876	Not Available	763	Open in IMG/M
3300010376\|Ga0126381_103832714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010376\|Ga0126381_104268692	Not Available	554	Open in IMG/M
3300010376\|Ga0126381_104272600	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300010376\|Ga0126381_105032062	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_10282511	All Organisms → cellular organisms → Bacteria → Acidobacteria	1648	Open in IMG/M
3300012948\|Ga0126375_10405893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	986	Open in IMG/M
3300012971\|Ga0126369_10159944	All Organisms → cellular organisms → Bacteria → Acidobacteria	2129	Open in IMG/M
3300012971\|Ga0126369_12497671	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300016319\|Ga0182033_10764940	Not Available	849	Open in IMG/M
3300016319\|Ga0182033_11389612	Not Available	632	Open in IMG/M
3300016341\|Ga0182035_10100369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2119	Open in IMG/M
3300016341\|Ga0182035_10691052	Not Available	888	Open in IMG/M
3300016371\|Ga0182034_10125853	Not Available	1885	Open in IMG/M
3300016387\|Ga0182040_10914519	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300016404\|Ga0182037_11380808	Not Available	622	Open in IMG/M
3300016404\|Ga0182037_11570285	Not Available	585	Open in IMG/M
3300021361\|Ga0213872_10212096	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300021444\|Ga0213878_10466633	Not Available	553	Open in IMG/M
3300021560\|Ga0126371_10001281	All Organisms → cellular organisms → Bacteria	21171	Open in IMG/M
3300021560\|Ga0126371_10011657	All Organisms → cellular organisms → Bacteria	7949	Open in IMG/M
3300021560\|Ga0126371_10201189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2087	Open in IMG/M
3300021560\|Ga0126371_10573125	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300021560\|Ga0126371_10620796	Not Available	1230	Open in IMG/M
3300021560\|Ga0126371_12111953	Not Available	679	Open in IMG/M
3300021560\|Ga0126371_12872162	Not Available	584	Open in IMG/M
3300027654\|Ga0209799_1043495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1001	Open in IMG/M
3300027654\|Ga0209799_1122148	Not Available	593	Open in IMG/M
3300027874\|Ga0209465_10386358	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031543\|Ga0318516_10274896	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300031545\|Ga0318541_10252931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	979	Open in IMG/M
3300031546\|Ga0318538_10046553	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300031572\|Ga0318515_10681957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	544	Open in IMG/M
3300031573\|Ga0310915_10057197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2537	Open in IMG/M
3300031679\|Ga0318561_10565730	Not Available	626	Open in IMG/M
3300031719\|Ga0306917_10449909	Not Available	1009	Open in IMG/M
3300031719\|Ga0306917_10815955	Not Available	731	Open in IMG/M
3300031736\|Ga0318501_10533046	Not Available	642	Open in IMG/M
3300031792\|Ga0318529_10541675	Not Available	541	Open in IMG/M
3300031795\|Ga0318557_10436850	Not Available	602	Open in IMG/M
3300031833\|Ga0310917_10077660	All Organisms → cellular organisms → Bacteria → Acidobacteria	2097	Open in IMG/M
3300031833\|Ga0310917_10683890	Not Available	695	Open in IMG/M
3300031879\|Ga0306919_10425595	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300031910\|Ga0306923_10023242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6592	Open in IMG/M
3300031910\|Ga0306923_10331645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1736	Open in IMG/M
3300031910\|Ga0306923_10659155	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300031910\|Ga0306923_10968909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	926	Open in IMG/M
3300031941\|Ga0310912_10843179	Not Available	707	Open in IMG/M
3300031946\|Ga0310910_10884094	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031947\|Ga0310909_11447858	Not Available	548	Open in IMG/M
3300031954\|Ga0306926_10906043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300032066\|Ga0318514_10573737	All Organisms → cellular organisms → Bacteria → Terrabacteria group	601	Open in IMG/M
3300032261\|Ga0306920_102868679	Not Available	654	Open in IMG/M
3300032261\|Ga0306920_103164959	Not Available	617	Open in IMG/M
3300033290\|Ga0318519_10159766	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.62%
Host-Associated	Host-Associated	2.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.62%
Plants	Host-Associated → Plants	2.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.92%
Loam	Environmental → Terrestrial → Soil → Loam	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	53.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03353750	2088090014	Soil	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGIFAKAKT
INPgaii200_11534332	2228664022	Soil	MNDTRDTDRLELFRLLQQAKPLVAPLYPDQQKQWVEESPLAQEISALLAKHPEYYAEIRKQIGGVFAKPQS
INPhiseqgaiiFebDRAFT_1013968841	3300000364	Soil	MNDTRDTDRLELFRLLQQAKPLVAPLYPDQQKQWVEESPLAQEISALLAKHPEYYAEIRKQIGGVFAKPQS*
JGI1027J12803_1007885004	3300000955	Soil	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGIFAKPKT*
JGI1027J12803_1010878541	3300000955	Soil	FRLLQQAKPLVAPLYPDQQKQWVEESPLAQEISALLAKHPEYYAEIRKQIGGVFAKPQS*
Ga0066398_100289242	3300004268	Tropical Forest Soil	MNSNRIAAKGEKSTMSDAHNSDRNELSRLVEHVKPLVAPLYPDQQKQWAEESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP*
Ga0066398_102296211	3300004268	Tropical Forest Soil	MNETQNADRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGIFAKPKA*
Ga0066395_100380212	3300004633	Tropical Forest Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP*
Ga0066388_1000668084	3300005332	Tropical Forest Soil	MNWNTIAAKEEKSTMSDAHNSERNELSRLVERAKPLVAPLYPDQQKQWAAESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP*
Ga0066388_1015524122	3300005332	Tropical Forest Soil	MKNTHDPDRLELSRLLQQAKPLVAPLYPDQQQQWAEESPLAQEILALLARHPEYYDEIRAQIGGMFAKP*
Ga0066388_1021352242	3300005332	Tropical Forest Soil	MSETQDPERLELSRLLQQAKPLVAPLYPDQVKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGIFAKPKE*
Ga0066388_1025653582	3300005332	Tropical Forest Soil	MNETQNADRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIYAQIGGIFAKPKA*
Ga0066388_1036696382	3300005332	Tropical Forest Soil	MNETHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEISSLLAKHPDYYAEIHAQIGAIFAKP*
Ga0066388_1070191012	3300005332	Tropical Forest Soil	MNNTHDPDRLELSRLLQEAKPLVAPLYPDQQKQWAEVSPLAQEISALLAKHPDYYSEIHAQIGGIFAKP*
Ga0070707_1023134042	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQI
Ga0070697_1000445642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPDYYEEIHAQIGGIFAKPKA*
Ga0066903_1001438186	3300005764	Tropical Forest Soil	MSETQNPERLELSRLLEQAKPLVAPLYPDQLKQWAAESPLAQAIFALLAVHPEYYEEIHAQIGGIFAKPKD*
Ga0066903_1069199282	3300005764	Tropical Forest Soil	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGEIFAKP*
Ga0081540_11283993	3300005983	Tabebuia Heterophylla Rhizosphere	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKRWAAESPLAQEISVLLAMHPEYYEEVHAQIGGIFAKP*
Ga0075425_1009319792	3300006854	Populus Rhizosphere	MNDAQNPDWLELSRLLQAARPLVAPLDPDQQKQWAAGSRVAQEICALLAKHPEFYDEIRAQIGEIFANP*
Ga0126374_100016167	3300009792	Tropical Forest Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP*
Ga0126374_111608061	3300009792	Tropical Forest Soil	MSETQDPERLELSRLLQQAKPLVAPLYPDQVKQWAAESPLAQEISALLAMHPEYYEEIHAQI
Ga0126380_100172342	3300010043	Tropical Forest Soil	MNSNRIAAKGEKSTMSDAHNSERNELSRLVERAKPLVAPLYPDQQKQWAAESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP*
Ga0126380_102089173	3300010043	Tropical Forest Soil	LLQQAKPLVAPLYPDQLEQWAAESPLAQEISALLARHPEYYEEIHAQIGEIFAKP*
Ga0126380_103758432	3300010043	Tropical Forest Soil	MNSNTIAAKEEKSTMSDAHNSDRNELSRLVEHAKPLVAPLYPDQQKQWAAESPLAQEISTLLSKHPEYYEEIDPQIRGIFPKP*
Ga0126380_106108192	3300010043	Tropical Forest Soil	MNDTHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEISALLVRHPDYYAEIHV
Ga0126380_108985651	3300010043	Tropical Forest Soil	MKYTHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEILALLARHPDYYDEIHAQIGGIFAKP*
Ga0126380_115173761	3300010043	Tropical Forest Soil	MNETQNADRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQQISALLAMHPEYYEEIHEQIGGIFAKP*
Ga0126384_100694691	3300010046	Tropical Forest Soil	MNETQSQDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGEIFAKP*
Ga0126384_101764003	3300010046	Tropical Forest Soil	MSETENPDRLELSRLLQQAKPLVAPLYPDQLEQWAAESPLAQEISALLARHPEYYEEIHAQIGEIFAKP*
Ga0126384_103757662	3300010046	Tropical Forest Soil	LSRLVEHAKPLVAPLYPDQQKQWAEESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP*
Ga0126384_110316841	3300010046	Tropical Forest Soil	MNSNTIAAKGEKLTMSDAHNSDRNELSRLVEHAKPLVAPLYPDQQKQWAEESPLAQEIS
Ga0126382_103248872	3300010047	Tropical Forest Soil	LILESGNVEGYGGSTMNEAPNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGIFAKPKA*
Ga0126382_104736091	3300010047	Tropical Forest Soil	LSRLVEHVKPLVAPLYPDQQKQWAEESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP*
Ga0126382_105011722	3300010047	Tropical Forest Soil	MNDTLNTDRLELSRLLQRAKPLVAPLYPDQQKQWAAESPLAQEISTLLLKHPEYYEEVHAQIGEVFIKP*
Ga0126382_106524842	3300010047	Tropical Forest Soil	MNDTHDPDLLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEISSLLARHPDYYAEIHAQIGGIFAKP*
Ga0126373_100155783	3300010048	Tropical Forest Soil	MTEIQNAERLALSRLLQQAKPLVAPLYPDQRKQWAAESPLAQEISTLLAKHPEYYEEVYAQLGEIYEALKC*
Ga0126373_100279733	3300010048	Tropical Forest Soil	MTDNQNRDQLELSRLLDQAKPLVAPLYPDQQKQWAAASPLAQEISALLLKHPEYYDEIHAQIGGIFARP*
Ga0126373_103853592	3300010048	Tropical Forest Soil	MNDNQNPDRLELSRLLQQAKPLVAPLYPDQQKQWADESPLAQEISALLARHPEYYEEIHAQIGGIFAKPSIGRFD*
Ga0126373_105103262	3300010048	Tropical Forest Soil	MSDTQNPDRVELSRLLQEAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP*
Ga0126373_112071441	3300010048	Tropical Forest Soil	MTETQNSDRLELFRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFAKP*
Ga0126373_112196981	3300010048	Tropical Forest Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGVFAKP*
Ga0126373_113074221	3300010048	Tropical Forest Soil	SNAMGELIMSDTQNPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLKP*
Ga0126370_100565173	3300010358	Tropical Forest Soil	MNDNQNPDRLELSRLLQQAKPLVAPLYPDQQKQWADESPLAQEISALLARHPEYYEEIHAQIGGLFAKPSISRFD*
Ga0126370_112519082	3300010358	Tropical Forest Soil	MDGGSTMNDTQNADRLELSRLLQEAKPLVAPLYPDQLKQWAADSPLAQEISALLAMHPEYYEEIHEQIGGIFAKPKA*
Ga0126370_112558652	3300010358	Tropical Forest Soil	MSETQNPERLELSRLLEQAKPLVAPLYPDQLKQWAAESPLAQAISALLAVHPEYYEEIHAQIGGIFAKPKD*
Ga0126370_112992481	3300010358	Tropical Forest Soil	MNETQNQDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGEIFAKP*
Ga0126376_101201421	3300010359	Tropical Forest Soil	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIYAQIGGIFAKPKA*
Ga0126376_102455563	3300010359	Tropical Forest Soil	MMNDTHDADRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISTLLLKHPEYYEEVH
Ga0126376_107978102	3300010359	Tropical Forest Soil	MNSNTIAAKGEKSTMSDAHNSDRNELSRLVEHAKPLVAPLYPDQQKQWAEESPLAQEISALLSKHPEYYEEIDPQIR
Ga0126376_113527152	3300010359	Tropical Forest Soil	MNDTHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEISALLARHPDYYAEIHAQIGGIFAKP*
Ga0126376_126245352	3300010359	Tropical Forest Soil	MNSNRIAAKGEKSTMSDAHNSDRNELSRLVEHVKPLVAPLYPDQQKQWAEESPLAQEISALLSKHPEYYEE
Ga0126376_131521881	3300010359	Tropical Forest Soil	TFAGESTNMNSNTIAAKEEKSTMSDAHNSDRNELSRLVEHAKPLVAPLYPDQQKQWAAESPLAQEISTLLSKHPEYYEEIDPQIRGIFPKP*
Ga0126372_111482511	3300010360	Tropical Forest Soil	STMNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGVFAKPKA*
Ga0126372_116262012	3300010360	Tropical Forest Soil	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAGESPLAQEISALLAMHPEYYEEIHAQIGGIFAKP*
Ga0126372_120300922	3300010360	Tropical Forest Soil	DGGSTMNDTQNADRLELSRLLQEAKPLVAPLYPDQLKQWAADSPLAQEISALLAMHPEYYEEIYAQIGGIFAKPKA*
Ga0126372_124123941	3300010360	Tropical Forest Soil	WRKAGVSTMRETQNPERLELSRLLEQAKPLVAPLYPDQLKQWAAESPLAQAISALLAVHPEYYEEIHAQIGGIFAKPKD*
Ga0126372_126188662	3300010360	Tropical Forest Soil	MDGGSTMNETKNETKNADRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHEQIGGIFAKP*
Ga0126378_100594005	3300010361	Tropical Forest Soil	MTETQNSDRLELFRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP*
Ga0126378_100868083	3300010361	Tropical Forest Soil	MNDTQDRDRLELSRLLQQAKPLLAPLYPDQQKQWAEGSPLAQEISALLAKHPEYYAEIHAQIGAIFAKP*
Ga0126377_110804481	3300010362	Tropical Forest Soil	MNWNTIAAKEEKSTMSDAHNSERNELSRLVERAKPLVAPLYPDQQKQWAAESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP
Ga0126377_127310372	3300010362	Tropical Forest Soil	MKNTHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEILALLARHPDYYDEIHAQIGGIFAKPKA*
Ga0126379_106292302	3300010366	Tropical Forest Soil	MNETQNQDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQKISALLAMHPEYYEEIHAQIGEIFAKP*
Ga0126379_116348221	3300010366	Tropical Forest Soil	MTETQNSDRLELFRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIH
Ga0126379_116590202	3300010366	Tropical Forest Soil	MNDTHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQEILALLARHPDYYDEIHAQIGGIFAKP*
Ga0126379_120281341	3300010366	Tropical Forest Soil	MGGLAMNDIQNPDRLELSRLLRQAKPLVAPLYPDQRAQWAEESPLAQEISALLVKHPDYYDEICAQIGEIFARP*
Ga0126381_1000545634	3300010376	Tropical Forest Soil	MSETQNPERLELSRLLEQAKPLVAPLYPDQLKQWAAESPLAQEISALLAVHPEYYEEIHAQIGGIFAKPKD*
Ga0126381_1002252473	3300010376	Tropical Forest Soil	MTETQNSDRLELFRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHPQIGGIFAKP*
Ga0126381_1003222153	3300010376	Tropical Forest Soil	MNDTQDQDRLELSRLLQQAKPLVEPLYPDQQKQWAEGSPLAQEICALLAKHPEYYAEIHAEMGGIFGKP*
Ga0126381_1004469211	3300010376	Tropical Forest Soil	LSRLLQQAKPLVAPLYPDQQKQWADESPLAQEISALLARHPEYYEEIHAQIGGLFAKPSISRFD*
Ga0126381_1004716722	3300010376	Tropical Forest Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFAKP*
Ga0126381_1023628762	3300010376	Tropical Forest Soil	MGGLAMNDTQNPDRLELSRLLRQAKPLVAPLYPDQRAQWAEESPLAQEISALLVKHPDYYDEICA
Ga0126381_1038327141	3300010376	Tropical Forest Soil	MNETQNPDRLELSRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGEILPKP*
Ga0126381_1042686921	3300010376	Tropical Forest Soil	MNDNQNPDRLELSLLLQQAKPLVAPLYPDQQKQWADESPLAQEISALLARHPEYYEEIHAQIGEILPKP*
Ga0126381_1042726002	3300010376	Tropical Forest Soil	MGGLAMNDTQDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPVAQEISALLVKHPEYYAEIHAQIGGIFAKP*
Ga0126381_1050320622	3300010376	Tropical Forest Soil	LLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP*
Ga0126383_102825112	3300010398	Tropical Forest Soil	MNDTHDPDRLELSRLLQQAKPLVAPLYPDQQKQWAEESPLAQQISALLAKRPEYYAEIHAQIGGIFAKP*
Ga0126375_104058931	3300012948	Tropical Forest Soil	NPEPDRLELSRLLQQAKPLVAPLYPDQLEQWAAESPLAQEISALLARHPEYYEEIHAQIGEIFAKP*
Ga0126369_101599442	3300012971	Tropical Forest Soil	MSETQNPERLELSRLLEQAKPLVAPLYPDQLKQWAAESPLAQVISALLAVHPEYYEEIHAQIGGIFAKPKD*
Ga0126369_124976713	3300012971	Tropical Forest Soil	MTDTQNPDRLALTRLLQQAKPLVAPLYPDQRKQWAADSPLAQEISALLAKHPEYYDEIQAQIGGIFAKP*
Ga0182033_107649402	3300016319	Soil	MSDTQNPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEI
Ga0182033_113896122	3300016319	Soil	LTMNDTQNPDWLELSRLLQQARPLVAPLYPDQYKQWAKESPLAVEISALLAKHPEYYDEIHAQIGGVFAKP
Ga0182035_101003691	3300016341	Soil	MNETQNPDRLKLLRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHG
Ga0182035_106910522	3300016341	Soil	MSNTKDTDRLELSRLLEQAKLLLEPLYPDQLKQWAAESPLAQEISALLAKHPEYYDEIHAQVGG
Ga0182034_101258531	3300016371	Soil	MSDTQNPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHTQIGGIFAKP
Ga0182040_109145191	3300016387	Soil	NPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLKP
Ga0182037_113808082	3300016404	Soil	MSDTQNPDRVELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHA
Ga0182037_115702852	3300016404	Soil	LELSRLLQQAKPLVEPLYPDQQKQWAAESPLAQEISALLAKHPEYYEEIHAQIGGIFRKP
Ga0213872_102120962	3300021361	Rhizosphere	MNNTQDRDRLALSRLLQEAKPLVEPLYPDQQKQWLEGSPLAQEISALLAKHPEYYAEIETQVGRIFPKP
Ga0213878_104666331	3300021444	Bulk Soil	MNNTQDRDRLALSRLLQEAKPLVEPLYPDQQKQWLEGSPLAQEISALLAKHPEYYDEIETQVGRIFPKP
Ga0126371_1000128117	3300021560	Tropical Forest Soil	MTDNQNRDQLELSRLLDQAKPLVAPLYPDQQKQWAAASPLAQEISALLLKHPEYYDEIHAQIGGIFARP
Ga0126371_100116577	3300021560	Tropical Forest Soil	MTEIQNAERLALSRLLQQAKPLVAPLYPDQRKQWAAESPLAQEISTLLAKHPEYYEEVYAQLGEIYEALKC
Ga0126371_102011892	3300021560	Tropical Forest Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP
Ga0126371_105731252	3300021560	Tropical Forest Soil	MSDTQNPDRVELSRLLQEAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP
Ga0126371_106207962	3300021560	Tropical Forest Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0126371_121119531	3300021560	Tropical Forest Soil	MNEIENPDRLELSRLLQQAKPLVASLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHAQIGGIFAKPKA
Ga0126371_128721622	3300021560	Tropical Forest Soil	MNDIQNPDRLELSRLLRQAKPLVAPLYPDQRAQWAEESPLAQEISALLVKHPDYYDEICAQIGEIFARP
Ga0209799_10434952	3300027654	Tropical Forest Soil	MNSNRIAAKGEKSTMSDAHNSDRNELSRLVEHVKPLVAPLYPDQQKQWAEESPLAQEISALLSKHPEYYEEIDPQIRGIFPKP
Ga0209799_11221482	3300027654	Tropical Forest Soil	RLLQQAKPLVAPLYPDQQKQWAEESPLAQEISALLAKRPEYYAEIHAQIGGIFAKP
Ga0209465_103863582	3300027874	Tropical Forest Soil	LTMTDNQNRDQLELSRLLDQAKPLVAPLYPDQQKQWAAASPLAQEISALLLKHPEYYDEIHAQIGGIFARP
Ga0318516_102748961	3300031543	Soil	MSDTQNPDRVELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAQIGGIFAKP
Ga0318541_102529311	3300031545	Soil	LTMSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0318538_100465532	3300031546	Soil	MSDTQNPDRVELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0318515_106819572	3300031572	Soil	TQNPDRLKLLRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHGQIGEIFAKP
Ga0310915_100571974	3300031573	Soil	MNETQNPDRLKLLRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHGQIGEIFAKP
Ga0318561_105657301	3300031679	Soil	MSDTQNPDRVELSRLLQEAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0306917_104499091	3300031719	Soil	APTSTVMRGLAMNDTQNPDRLELSRLLREAKPLVAPLYPDQWTQWAAESPLAQEISALLVKHPEYYDEICTQIGGIFARP
Ga0306917_108159552	3300031719	Soil	MSDTQNPDRVELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEVHAEIGGIFAKP
Ga0318501_105330461	3300031736	Soil	NPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0318529_105416751	3300031792	Soil	MNDTQNPDRLELSRLLREAKPLVAPLYPDQWTQWAAESPLAQEISALLVKHPEYYDEICTQIGGIFARP
Ga0318557_104368502	3300031795	Soil	LSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0310917_100776602	3300031833	Soil	MGGLIMSDTQNPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLKP
Ga0310917_106838901	3300031833	Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEI
Ga0306919_104255951	3300031879	Soil	MSDTQNPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLKP
Ga0306923_100232422	3300031910	Soil	MNETQNPDRLKLLRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHGQIGGIFAKP
Ga0306923_103316453	3300031910	Soil	PDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0306923_106591551	3300031910	Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHTQIGGIFAKP
Ga0306923_109689092	3300031910	Soil	CYPSALSAAHIERQGRLTMSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLTKHPEYYDEIHAEIGGIFAKP
Ga0310912_108431791	3300031941	Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFAKP
Ga0310910_108840941	3300031946	Soil	RLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLK
Ga0310909_114478581	3300031947	Soil	AMGGLIMSDTQNPDRLELSRLLQQAKPLVAPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLKP
Ga0306926_109060432	3300031954	Soil	TQNPDRRELSRLLREAKPLVAPLYPDQWTQWAAESPLAQEISALLVKHPEYYDEICTQIGGIFARP
Ga0318514_105737372	3300032066	Soil	LKLLRLLQQAKPLVAPLYPDQLKQWAAESPLAQEISALLAMHPEYYEEIHGQIGEIFAKP
Ga0306920_1028686792	3300032261	Soil	MSDTQNPDRLELSRLLQQAKPLVVPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHTQIGG
Ga0306920_1031649591	3300032261	Soil	MTDIQNRDHFELSRLLEQAKPLVTPLYPDQQKQWAAASPLAQEISALLLKHPEYYDEIHARIGAIFAKP
Ga0318519_101597662	3300033290	Soil	MSDTQNPDRVELSRLLQEAKPLVVPLYPDQQKQWAAESPLAQEISALLAKHPEYYDEIHAQIGGIFLKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066533

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences