Metagenome / Metatranscriptome Family F066511

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066511
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	88 residues
Representative Sequence	LEMPGPNEGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPTAGGQP
Number of Associated Samples	102
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.38 %
% of genes near scaffold ends (potentially truncated)	96.03 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.635 % of family members)
Environment Ontology (ENVO)	Unclassified (30.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.53% β-sheet: 21.37% Coil/Unstructured: 64.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF10604	Polyketide_cyc2	5.56
PF02698	DUF218	3.97
PF01810	LysE	3.17
PF07731	Cu-oxidase_2	2.38
PF07690	MFS_1	1.59
PF01914	MarC	1.59
PF00106	adh_short	0.79
PF08240	ADH_N	0.79
PF02660	G3P_acyltransf	0.79
PF02321	OEP	0.79
PF07732	Cu-oxidase_3	0.79
PF00903	Glyoxalase	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	3.97
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	3.97
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	3.17
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.59
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	1.59
COG0344	Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase	Lipid transport and metabolism [I]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.86 %
Unclassified	root	N/A	7.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.54 %
Unclassified	root	N/A	7.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.73 %
Unclassified	root	N/A	7.14 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.59 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.14 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.97 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.59 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.79 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.14 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	3.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.59 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.79 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.14 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	3.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.79 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.14 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.59 %
Frigoriglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus	0.79 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.14 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	3.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.59 %
Frigoriglobus tundricola	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	0.79 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1019097	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300001661\|JGI12053J15887_10513418	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300002245\|JGIcombinedJ26739_100942822	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300004080\|Ga0062385_10790812	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300004092\|Ga0062389_100526277	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300004092\|Ga0062389_100921054	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300004635\|Ga0062388_100828555	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300004635\|Ga0062388_102615822	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300005542\|Ga0070732_10147054	All Organisms → cellular organisms → Bacteria → Proteobacteria	1402	Open in IMG/M
3300005591\|Ga0070761_10545836	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005591\|Ga0070761_10695252	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300005712\|Ga0070764_10075255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300005712\|Ga0070764_10225358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300005712\|Ga0070764_10364564	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005994\|Ga0066789_10174464	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300006059\|Ga0075017_101168124	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300006893\|Ga0073928_10492098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	881	Open in IMG/M
3300009500\|Ga0116229_10891878	Not Available	718	Open in IMG/M
3300009638\|Ga0116113_1103664	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300009764\|Ga0116134_1073581	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Frigoriglobus → Frigoriglobus tundricola	1266	Open in IMG/M
3300010880\|Ga0126350_11509095	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300010880\|Ga0126350_11708462	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300012189\|Ga0137388_11072040	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300012203\|Ga0137399_11155991	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300012361\|Ga0137360_11517843	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300012925\|Ga0137419_10303160	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012925\|Ga0137419_10789120	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300012925\|Ga0137419_11121779	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300013832\|Ga0120132_1151548	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300014168\|Ga0181534_10697377	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300014501\|Ga0182024_10365098	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300014501\|Ga0182024_12406830	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300014657\|Ga0181522_10811065	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300015242\|Ga0137412_10652754	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300015264\|Ga0137403_10140409	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300018042\|Ga0187871_10287550	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300018042\|Ga0187871_10788256	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300018043\|Ga0187887_10699179	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300019887\|Ga0193729_1031338	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300020021\|Ga0193726_1320412	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300020034\|Ga0193753_10150226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1111	Open in IMG/M
3300020579\|Ga0210407_11328600	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300020582\|Ga0210395_10827750	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300021171\|Ga0210405_10310042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1247	Open in IMG/M
3300021171\|Ga0210405_10763917	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300021401\|Ga0210393_10195166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1635	Open in IMG/M
3300021402\|Ga0210385_11460188	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300021404\|Ga0210389_10894174	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300021404\|Ga0210389_11072368	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300021405\|Ga0210387_11182438	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300021407\|Ga0210383_11112574	Not Available	667	Open in IMG/M
3300021407\|Ga0210383_11343244	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300021433\|Ga0210391_10016171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6020	Open in IMG/M
3300021433\|Ga0210391_10466522	Not Available	991	Open in IMG/M
3300021433\|Ga0210391_11092775	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300021433\|Ga0210391_11274641	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300021475\|Ga0210392_10286299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1177	Open in IMG/M
3300021478\|Ga0210402_11159724	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300021478\|Ga0210402_11645015	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300022533\|Ga0242662_10353642	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300022557\|Ga0212123_10546368	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300023046\|Ga0233356_1007790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300024317\|Ga0247660_1016376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1154	Open in IMG/M
3300024323\|Ga0247666_1029560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1147	Open in IMG/M
3300025862\|Ga0209483_1083454	All Organisms → cellular organisms → Bacteria → Proteobacteria	1427	Open in IMG/M
3300026345\|Ga0257148_1021551	Not Available	530	Open in IMG/M
3300026515\|Ga0257158_1103871	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300027080\|Ga0208237_1053605	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300027313\|Ga0207780_1047574	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300027330\|Ga0207777_1089865	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300027496\|Ga0208987_1019927	Not Available	1146	Open in IMG/M
3300027559\|Ga0209222_1025735	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300027567\|Ga0209115_1095083	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300027619\|Ga0209330_1075850	All Organisms → cellular organisms → Bacteria → Proteobacteria	767	Open in IMG/M
3300027671\|Ga0209588_1142379	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300027681\|Ga0208991_1188053	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300027692\|Ga0209530_1109551	All Organisms → cellular organisms → Bacteria → Proteobacteria	783	Open in IMG/M
3300027767\|Ga0209655_10297624	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300027807\|Ga0209208_10202849	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300027857\|Ga0209166_10215672	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300027862\|Ga0209701_10197201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1202	Open in IMG/M
3300027879\|Ga0209169_10186368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300027879\|Ga0209169_10503191	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300028047\|Ga0209526_10457511	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300028765\|Ga0302198_10185410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1042	Open in IMG/M
3300028773\|Ga0302234_10347817	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300028800\|Ga0265338_11176457	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300028801\|Ga0302226_10083550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1444	Open in IMG/M
3300028808\|Ga0302228_10234577	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300028877\|Ga0302235_10095912	Not Available	1353	Open in IMG/M
3300028877\|Ga0302235_10390937	Not Available	596	Open in IMG/M
3300028879\|Ga0302229_10361428	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300029911\|Ga0311361_10146173	All Organisms → cellular organisms → Bacteria → Proteobacteria	3119	Open in IMG/M
3300029955\|Ga0311342_10147279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	2380	Open in IMG/M
3300029955\|Ga0311342_10646293	All Organisms → cellular organisms → Bacteria → Proteobacteria	846	Open in IMG/M
3300029999\|Ga0311339_10880902	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300029999\|Ga0311339_11605969	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300030011\|Ga0302270_10646143	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300030013\|Ga0302178_10293105	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300030520\|Ga0311372_11550534	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300030617\|Ga0311356_10329020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1524	Open in IMG/M
3300030646\|Ga0302316_10054949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779	Open in IMG/M
3300030737\|Ga0302310_10676426	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300030737\|Ga0302310_10719776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300030743\|Ga0265461_12661910	Not Available	594	Open in IMG/M
3300030906\|Ga0302314_10650090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300031015\|Ga0138298_1628171	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300031027\|Ga0302308_10617915	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300031028\|Ga0302180_10526066	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300031057\|Ga0170834_105742975	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300031231\|Ga0170824_128597513	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300031234\|Ga0302325_12971572	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300031236\|Ga0302324_100059215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6806	Open in IMG/M
3300031236\|Ga0302324_102804478	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300031258\|Ga0302318_10351534	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300031446\|Ga0170820_10689009	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300031474\|Ga0170818_110632168	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300031525\|Ga0302326_10891787	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300031708\|Ga0310686_103953288	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300031708\|Ga0310686_106214132	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300031718\|Ga0307474_10921469	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300031754\|Ga0307475_11059066	Not Available	636	Open in IMG/M
3300032805\|Ga0335078_10875597	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300032892\|Ga0335081_11856823	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300033405\|Ga0326727_10025407	All Organisms → cellular organisms → Bacteria → Acidobacteria	11108	Open in IMG/M
3300033982\|Ga0371487_0108671	All Organisms → cellular organisms → Bacteria → Proteobacteria	1445	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.83%
Host-Associated	Host-Associated	3.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.13%
Aquatic	Environmental → Aquatic	12.70%
Plants	Host-Associated → Plants	3.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.11%
Peat	Environmental → Terrestrial → Peat	23.02%
Freshwater	Environmental → Aquatic → Freshwater	10.32%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.59%
Peat Moss	Host-Associated → Plants → Peat Moss	1.59%
Sediment	Environmental → Aquatic → Sediment	0.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.06%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	23.02%
Loam	Environmental → Terrestrial → Soil → Loam	15.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.97%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.59%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	23.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.59%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	16.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.59%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.59%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.59%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.59%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.79%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026345	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10190971	3300000546	Quercus Rhizosphere	AGGIDDALEMPGPGEGAVISLGLYSEPKRAQARVAQVQGLGFNPGIADRKRNGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPTAGGQS*
JGI12053J15887_105134181	3300001661	Forest Soil	DALEMPGPNEGSVISLGLYSEPKRAQIRVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGDSGHILRLEVKGCPSDSGTSP*
JGIcombinedJ26739_1009428223	3300002245	Forest Soil	VISLGLYSESKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSEAGRIVRLEVKGCPASGPSP*
Ga0062385_107908121	3300004080	Bog Forest Soil	ILAKLKTGGIDDALEMPGPNDGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPADLQGEAGRIVRLEVKGCPAVSGTSP*
Ga0062389_1005262773	3300004092	Bog Forest Soil	SLGLYSESKRAQARVAQAQSLGFNPSLADRKRTGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSASAPQ*
Ga0062389_1009210541	3300004092	Bog Forest Soil	KAGGIEDALEMPGPNEGSVISLGLYSEANRAQARVAQAQSLGFNPGLADRKRTGNVYWIDIDLKPTDSVLKPSDLQGEAGRIVRLEVKGCPAGGGTQP*
Ga0062388_1008285553	3300004635	Bog Forest Soil	MPGPNDGSVISLGLYSEPKRAQARISQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGILNPSDLQGESGRIVRLEVKGCPSVAGAQQ*
Ga0062388_1026158221	3300004635	Bog Forest Soil	MLTKLKAGGIEDALEMPGPNEGSVISLGLYSDSKRAQTRVAQAQSLGFNPALADRKRTGDVYWIDIDLKPTDSVLKPTDLQGEAGRIVRLEVKGCPAGGGAS*
Ga0070732_101470543	3300005542	Surface Soil	GGIDDALEMPGPNEGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSAGQT*
Ga0070761_105458363	3300005591	Soil	SVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSAGQT*
Ga0070761_106952521	3300005591	Soil	DALEMPGPNDASVMSLGLYSESNRAQARVAQAQSLGFNPGIADRKRTGNVYWIDIDLKPTDSVLKPADLQGESGRIVRLEVKGCPAAGGAPP*
Ga0070764_100752554	3300005712	Soil	EMPGPNEGSVISLGLYSEPKRAQLRVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGQT*
Ga0070764_102253583	3300005712	Soil	LYSDPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPSVSGAAP*
Ga0070764_103645641	3300005712	Soil	GLYSDAKRAQSRIAQAQGLGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPSDLQSETGHIQRLEVKACPSAGPTP*
Ga0066789_101744641	3300005994	Soil	ILAKLKGGGFDDALEMPGPNDGSVISLGLYSDPKRAQARVVQAQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPADLQDEAGRIVRLEVKGCPSVSGAAS*
Ga0075017_1011681241	3300006059	Watersheds	SVISLGLYSEPKRAQARVTQAQALGFNPGIADRKRNGNVYWIDIDLKSTDGLLNPSDLQGESGRIVRLEVKGCPAMGAQ*
Ga0073928_104920983	3300006893	Iron-Sulfur Acid Spring	GIDDALEMPGPNEGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDGLLNPADLQSEGGRIVRLQVKGCPAVSGPSP*
Ga0116229_108918781	3300009500	Host-Associated	MPGPNDTSVISLGLFSEPKRAQARVAQAQALSLNPATADRKRNGNVYWIDIDLKATDAMLNPADLQGEAGRIVRLEVKGCPSATAASR*
Ga0116113_11036643	3300009638	Peatland	FSDSKWAQTRISQAQALGFNPAIADRKRTGDVYWIDIDLKPTDSVLKPADLQTDSGRIVRLEVKGCPAAAGGVAP*
Ga0116134_10735814	3300009764	Peatland	DALEMPGPNDSSVISLGLYSESNRAQARVAQAQALGFNPGLADRKRTGNVYWIDIDLKPTDSVLKPADLQGEAGRIVRLEVKGCPAVGGASP*
Ga0126350_115090952	3300010880	Boreal Forest Soil	LSLGLYSDSKRAQSRISQAQALGFNPGIADRKRNGDVYWIDIDLKPTDSVLKPSDLQTDSGRIVRLEVKGCPPAAGAAP*
Ga0126350_117084622	3300010880	Boreal Forest Soil	SVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPEDLQGETGHIVRLEVKGCPSIAGASP*
Ga0137388_110720401	3300012189	Vadose Zone Soil	MPGPNDGSVISLGLYSESKRAQARVAQAQALGFNPAIADRKRTGNVYWIDIDLKPTDSLLNPADLQSEAGRIVRLEVKGCPASGPSP*
Ga0137399_111559912	3300012203	Vadose Zone Soil	GDQILAKLKAGGIDDALEMPGPNDGSVISLGLYSDPKRAQTRVAQVQALGLNPGIADRKRTGDVYWIDIDLKPTDSLLNPADLQSEGGRIVRLQVKGCPSVSGPSP*
Ga0137360_115178431	3300012361	Vadose Zone Soil	IDDALEMPGPNEGSVISLGLYSESKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSDAGRIVRLEVKGCPPVSGPSP*
Ga0137419_103031603	3300012925	Vadose Zone Soil	LEMPGPNEGAVISLGLYSDAKRAQVRVAQAQSLGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSVGGQS*
Ga0137419_107891202	3300012925	Vadose Zone Soil	DALEMPGPADASVISLGLFSDQKRAQARVGQAQVLGLNPTIADRKRTGNVYWIDIDLKATDGLLNPADLQGESGHISRLEVKACPSGAPAAP*
Ga0137419_111217791	3300012925	Vadose Zone Soil	ADGSVLSLGLFSDQKRAQSRIAQMQALGLNPAIADRKRNGNVYWIDIDLKPTEGVLNPADLQGESGRISRLQVKGCPTAAARP*
Ga0120132_11515481	3300013832	Permafrost	GLYSEAKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLTPADLQGESGRIVRLEVRYLSVK*
Ga0181534_106973772	3300014168	Bog	GGIDDALEMPGPNDGSVISLGLYSEPKRAQSRVAQVQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPADLQGEAGRIVRLEVKSCPAAGTAP*
Ga0182024_103650984	3300014501	Permafrost	PNDGAVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSAGQI*
Ga0182024_124068302	3300014501	Permafrost	GGIDDALEMPGPNDGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPVSGAAP*
Ga0181522_108110652	3300014657	Bog	EMPGPSESSVISLGLFADQKRAQTRVSQAQALGFNPGVADRKRTGDVYWIDIDLKPTDSVLKPSDLQSETGHIQRLEVKACPSAGAVP*
Ga0137412_106527541	3300015242	Vadose Zone Soil	KAGGIDDALEMPGPNEGSVISLGLYSEPKRAQGRVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSAGGQT*
Ga0137403_101404096	3300015264	Vadose Zone Soil	GTVISLGLYSEAKRAQARGAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGGQS*
Ga0187871_102875501	3300018042	Peatland	NSEQVLAKLKAGGIDDALEMPGPTEGSVSSLGLYGDSKRAQARVAQAQALGFNPALADRKRTGDVYWIDIDLKPTDSVLKPTDLQGEAGHIVRLEVKGCPVGGGTS
Ga0187871_107882561	3300018042	Peatland	AAGIEDALEMPGPNESSVISLGLYGDQKRAQTRVTQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPSDLQNETGRIQRLEVKACPSAGATPP
Ga0187887_106991792	3300018043	Peatland	SVISLGLYSEPKRAQARVAQAQALGFNPGVADRKRTGNVYWIDIDLKPTDSLLNPADLQGESGRIVRLEVRACPSAAGATP
Ga0193729_10313383	3300019887	Soil	LYSEPKRAQARVAQVQGLGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGGQS
Ga0193726_13204122	3300020021	Soil	NEGSVISLGLYSDAKRAQTRVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGGRS
Ga0193753_101502263	3300020034	Soil	MPGPNEASVISLGLYSESKRAQTRVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGGQS
Ga0210407_113286002	3300020579	Soil	GGIDDALEMPGPNEGPVISLGLYSEPKRAQSRVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSAGGQT
Ga0210395_108277501	3300020582	Soil	NDASVISLGLYSESKRAQSRVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLDPSDLQGESGRIVRLEVKGCPVSGAQQ
Ga0210405_103100421	3300021171	Soil	GLYSEPKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKSTDGLLNPSDLQGESGRIVRLEVKGCPAGAQ
Ga0210405_107639171	3300021171	Soil	MPGPNDGSVISLGLYSESKRAQARVAQAQALGFNPAIADRKRSGNVYWIDIDLKPTDSVLKPSDLQGEAGRIVRLEVKGCPADGASQP
Ga0210393_101951661	3300021401	Soil	GPNDASVISLGLYSEPNRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLVNPADLQGEAGRIVRLEVKGCPSVAGAAP
Ga0210385_114601881	3300021402	Soil	EDALEMPGPNEGSVISLGLYSDSKRAQTRVAQAQSLGFNPALADRKRTGDVYWIDIDLKPTDSVLKPTDLQAEAGRIVRLEVKGCPAAGGAS
Ga0210389_108941741	3300021404	Soil	YSEQKRAQARVAQVQALGFNPGIADRKRNGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSPGGHT
Ga0210389_110723682	3300021404	Soil	GLFSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGHIVRLEVKGCPSIPGASP
Ga0210387_111824381	3300021405	Soil	PGPNDGSVISLGLYSESKRAQARVAQAQALGFNPAIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPSVSGPSP
Ga0210383_111125742	3300021407	Soil	QILAKLKAGGIDDALEMPGPNEGSVISLGLYSEPKRAQARVAQVQALGFNPGLTDRKRIGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPAAGGQS
Ga0210383_113432441	3300021407	Soil	ISLGLYSESKRAQSRVAQVQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPADLQGESGRIVRLEVKGCPTAAGAQQ
Ga0210391_100161711	3300021433	Soil	EMPGPNDGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKSTDGLLNPSDLQGESGRIVRLEVKGCPAGAQ
Ga0210391_104665221	3300021433	Soil	SLGLYSDSKRAQTRVAQAQSLGFNPALADRKRTGDVYWIDIDLKPTDSVLKPTDLQGEAGRIVRLEVKGCPAGGGAS
Ga0210391_110927752	3300021433	Soil	EGSVISLGLYSEPKRAQLRVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGQT
Ga0210391_112746411	3300021433	Soil	SQSSGQLLSKLKSAGIDDALEMPGPSESSVISLGLFADQKRAQTRVSQAQALGFNPGIADRKRTGDVYWIDIDLKATDSVLKPSDLQSETGHIQRLEVKACPNAGATP
Ga0210392_102862993	3300021475	Soil	NEGSVISLGLYSEPKRAQSRVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSAGGPT
Ga0210402_111597241	3300021478	Soil	SLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPSVPGASP
Ga0210402_116450152	3300021478	Soil	AEQILAKLKSSGIDDALEMPGPNDGSVISLGLYSEPKRAQARIAQAQALGFNPAIADRKRNGNVYWIDIDLKPTDGILNPADLQGESGRIVRLEVKGCPSAAGTPQ
Ga0242662_103536422	3300022533	Soil	VISLGLFSEPKRAQARVAQAQGLGFNPGIADRKRNGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPTAGGQS
Ga0212123_105463683	3300022557	Iron-Sulfur Acid Spring	GIDDALEMPGPNEGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDGLLNPADLQSEGGRIVRLQVKGCPAVSGPSP
Ga0233356_10077903	3300023046	Soil	LEMPGPNDGSVISLGLYGESKRAQARVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDGLLNPADLQSEGGRIVRLQVKGCPSVSGPSP
Ga0247660_10163763	3300024317	Soil	PNEGSVISLGLYGEAKRAQARVSQVQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPSVSGASP
Ga0247666_10295603	3300024323	Soil	LYGEAKRAQARVSQVQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPSVSGASP
Ga0209483_10834544	3300025862	Arctic Peat Soil	MLAKLKAGGIEDALEMPGPNDGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDALLNPADLRGEAGRIVRLEVKGCPSVSGVP
Ga0257148_10215511	3300026345	Soil	PGPNEVSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNMYWIDIDLKPTDSLLNPADLQDDAGRIVRLEVKGCPPVPGPSP
Ga0257158_11038711	3300026515	Soil	LEMPGPNEGSVISLGLYSEAKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSDAGRIVRLEVKGCPPVSGPSP
Ga0208237_10536051	3300027080	Forest Soil	GLYSDSKRAQTRVAQAQSLGFNPALADRKRTGDVYWIDIDLRATDSVLKPSDLQSETGHIQRLEVKACPSAGVTP
Ga0207780_10475743	3300027313	Tropical Forest Soil	KLKAGGIDDALEMPGPNEGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLHPSDLQGESGRIVRLEVKACPTGGQP
Ga0207777_10898651	3300027330	Tropical Forest Soil	LEMPGPNEGSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPTAGGQP
Ga0208987_10199271	3300027496	Forest Soil	NEGSVISLGLYSESKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPSSGGQG
Ga0209222_10257353	3300027559	Forest Soil	MPGPIEGSVISIGLYSDSKRAQTRVAQAQSLGFNPALADRKRTGDVYWIDIDLKPTDSVLKPTDLQAEAGRIVRLEVKGCPAAGGAS
Ga0209115_10950832	3300027567	Forest Soil	GIDDALEMPGPSESSVISLGLFADQKRAQTRVSQAQALGFNPGIADRKRTGDVYWIDIDLRATDSVLKPSDLQSETGHIQRLEVKACPSAGVTP
Ga0209330_10758503	3300027619	Forest Soil	GLYSDPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPSAGGQP
Ga0209588_11423791	3300027671	Vadose Zone Soil	GIDDALEMPGPNEGSVISLGLYSEAKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSDAGRIVRLEVKGCPPVSGPSP
Ga0208991_11880532	3300027681	Forest Soil	LLAKLKAGGIDDALEMPGPNDGPVISLGLYNDPKRAQARVAQVQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQNGAGRIMRLEVKGCPAISGAAP
Ga0209530_11095513	3300027692	Forest Soil	SVISLGLYGESKRAQARVAQVQALGFNPGIADRKRTGSVYWIDIDLKPTDSLLNPADLQGESGRIVRLEVKACPPAAGSAP
Ga0209655_102976242	3300027767	Bog Forest Soil	PNEGSVISLGLYSESKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDGLLNPADLQGEAGRIVRLEVKGCPSVSGSSP
Ga0209208_102028491	3300027807	Host-Associated	NETSVISLGLFSEPKRAQARVAQAQALSLNPAVTDRKRNGNVYWIDVDLKATDGMLNPEDLQGEAGRIVRLEVKGCPDAAGPSS
Ga0209166_102156723	3300027857	Surface Soil	PNERSVISLGLYGDSKRAQTRVAQAQSLGLNPALTDRKHTGDVYWVDIDLKPTDSVLKPSDLQGEAGRIVRLEVKGCPAAGGSS
Ga0209701_101972011	3300027862	Vadose Zone Soil	DALEMPGPNEGSVISLGLYSESKRAQARVAQAQALGFNPAIADRKRTGNVYWIDIDLKPTDSLLNPADLQSEAGRIVRLEVKGCPASGPSP
Ga0209169_101863681	3300027879	Soil	NDGSVISLGLYSDPKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPSVSGAAP
Ga0209169_105031911	3300027879	Soil	SLGLYSDAKRAQSRIAQAQGLGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPADLENDSSRIVRLEVKGCPASPAGAAP
Ga0209526_104575113	3300028047	Forest Soil	GSVISLGLYSEPKRAQARVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSLLNPADLQSEGGRIVRLQVKGCPPVSGASP
Ga0302198_101854101	3300028765	Bog	TDALEMPGPNDASVISLGLYSDQKRALARVAQAQALGFNPGIADRKRTGSVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPGAPGAQ
Ga0302234_103478171	3300028773	Palsa	LEMPGPSESSVISLGLFADQKRAQTRVSQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPGDLQSETGHIQRLEVKACPNAGATS
Ga0265338_111764571	3300028800	Rhizosphere	PGRGAAEQVLAKLKAGGIDDALQMPGPNDAAVVSLGLYVEPKRAQARVAQAQALGFNPGLSDRKRTGNVYWIDLDLKPTDSLLNPSDLQGEAGRIVRLEVKGCPGSAT
Ga0302226_100835504	3300028801	Palsa	MPGPNESSVISLGLYGESKRAQTRVAQVQALGFNPGIADRKRSGNVYWIDIDLKPTDSLLNPADLQGDSGRIVRLEVKACPPAAGSAP
Ga0302228_102345771	3300028808	Palsa	GLFADQKRAQTRVSQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPGDLQSETGHIQRLEVKACPNAGATS
Ga0302235_100959121	3300028877	Palsa	PGPSESSVISLGLFADQKRAQTRVAQAQALGFNPGIADRKRTGDVYWIDIDLKSTDSVPKPSDLQTETGHIQRLEVKACPSAGATS
Ga0302235_103909371	3300028877	Palsa	LGLFSDSKRAQARVAQAQALGFNPALADRKRTGDMYWIDIDLKPTDSVLKPADLQGEVGRIVRLEVKGCPIAGGPS
Ga0302229_103614281	3300028879	Palsa	VYLPIPPSQSSVQLLSKLKSGGVDDALEMPGPSESSVISLGLFADQKRAQTRVAQAQALGFNPGIADRKRTGDVYWIDIDLKSTDSVPKPSDLQTETGHIQRLEVKACPSAGATS
Ga0311361_101461733	3300029911	Bog	VISLGLYSDSKRAQSRVAQAQSLGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPADLQGESGRIVRLEVKGCPSVGGATP
Ga0311342_101472794	3300029955	Bog	GPSDGSVISLGLYSEPKRAQARVAQAQALGFNPGVADRKRTGNVYWIDIDLKPTDSLLNPADLQGESGRIVRLEVRACPAASGAAQ
Ga0311342_106462933	3300029955	Bog	LGLFSDQKRAQARVAQAQALGLNPGIADRKRTGSVYWIDIDLKPTDSLVNPADLQGEAGRIVRLEVKGCPGAPGAQ
Ga0311339_108809023	3300029999	Palsa	LKAGGIDDALEMPGPSESSVISLGLFADQKRAQTRVGQAQALGFNPGIADRKRTGDVYWIDIDLKSTDSVLKPSDLQSETGHIQRLEVKACPSVGAPP
Ga0311339_116059691	3300029999	Palsa	SESKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSEAGRIVRLEVKGCPSVSGASP
Ga0302270_106461431	3300030011	Bog	DGSVISLGLYSDSKRAQSRVAQAQSLGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPADLQGESGRIVRLEVKGCPSVGGATP
Ga0302178_102931051	3300030013	Palsa	ISLGLYGDQKRAQTRVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPSDLQSETGRIQRLEVKGCPSAGATP
Ga0311372_115505341	3300030520	Palsa	LEMPGPNDGSVISLGLYSETKRAQARVAQAQTLGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPVAGAPQ
Ga0311356_103290203	3300030617	Palsa	LEMPGPSDGSVISLGLYSESKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSEAGRIVRLEVKGCPSVSGASP
Ga0302316_100549491	3300030646	Palsa	VISLGLFSDQKRAQARVAQAQVLGLNPGIADRKRTGSVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPGAPGAQ
Ga0302310_106764261	3300030737	Palsa	LEMPGPNDGSVISLGLYSETKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPVAGAPQ
Ga0302310_107197762	3300030737	Palsa	NESSVISLGLYGESKRAQTRVAQVQALGFNPGIADRKRSGNVYWIDIDLKPTDSLLNPADLQGDSGRIVRLEVKACPPAAGSAP
Ga0265461_126619102	3300030743	Soil	LEMPGPNDGSVISLGLYSDPKRAQARVAQAQALGFNPGIAYRKRTGNVYWIDIDLKPTDSLLNPTDLQGEAGRIVRLEVKGCPSAPGTSP
Ga0302314_106500903	3300030906	Palsa	WVYLPIPPSQSSGPLLSKLKAAGIDDALEMPGPSESSVISLGLFADQKREQTRVGQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPGDLQSETGHIQRLEVKGCPSAGAAS
Ga0138298_16281712	3300031015	Soil	PGPNEGSVISLGLYGESKRAQARVAQVQALGFNPGIADRKRTGSVYWIDIDLKPTDSLLNPADLQGQLGRIVRLEVKACPPAAGSAS
Ga0302308_106179152	3300031027	Palsa	AGIEDALEMPGPNESSVISLGLYGDQKRAQTRVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPSDLQNETGRIQRLEVKGCPSAGATPP
Ga0302180_105260662	3300031028	Palsa	VISLGLYSETKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGLLNPSDLQGESGRIVRLEVKGCPVAGAPQ
Ga0170834_1057429752	3300031057	Forest Soil	PNDGSVISLGLYSEPKRAQARIAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDGILNPSDLQGESGRIVRLEVKGCPSAVGAPQ
Ga0170824_1285975133	3300031231	Forest Soil	DDALEMPGPNEGSVISLGLYGEAKRAQARVSQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPSDLQGEAGRIVRLEVKGCPSVSGASP
Ga0302325_129715721	3300031234	Palsa	LFSEQKRAQARVAQAHGLGLDPGLADRKRTGNVYWIDVDLKPTDGMLNPQDLPQDLQGEAGHISRLEIKACPAATS
Ga0302324_1000592159	3300031236	Palsa	ISLGLFSDQKRAQARVAQAQVLGLNPGIADRKRTGSVYWIDIDLKPTDSLLNPADLQGEAGRIVRLEVKGCPGAPGAQ
Ga0302324_1028044781	3300031236	Palsa	VISLGLIADQKRAQTRVGQAQALGFNPGIADRKRTGDVYWIDIDLKATDSVLKPSDLQSETGRIQRLEVKACPSAGAVR
Ga0302318_103515341	3300031258	Bog	GPSDGSVISLGLYSEPKRAQARVAQAQAMGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSDAGRIVRLEVKGCPALSGGSP
Ga0170820_106890092	3300031446	Forest Soil	DGSVISLGLYSESKRAQARVAQVQALGFNPGVADRKRTGNVYWIDIDLKPTDSVLNPADLQSEAGRIVRLEVKGCPSPRGSSP
Ga0170818_1106321682	3300031474	Forest Soil	EMPGPNDGSVISLGPYSESKRAQARVAQAQALGFNPGIADRKRTGNVYWIDIDLKPTDSLLNPADLQSETGRIVRLEVKGCPATGASP
Ga0302326_108917871	3300031525	Palsa	KAAGIDDALEMPGPSESSVISLGLFADQKRAQTRVSQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPGDLQSETGHIQRLEVKACPNAGATS
Ga0310686_1039532882	3300031708	Soil	LPIPPSQSSVQLLSKLKSGGVDDALEMPGPSESSVISLGLFADQKRAQTRVSQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKPGDLQSETGHIQRLEVKACPNAGATS
Ga0310686_1062141322	3300031708	Soil	GIEDALEMPGPSEGSVISLGLYGDSKRAQTRVAQAQSLGFNPALADRKRTGDVYWIDIDLKPTDSVLKPTDLQGEAGRIVRLEVKGCPAGGGAP
Ga0307474_109214692	3300031718	Hardwood Forest Soil	LAKLKAGGIDDALEMPGPGEGAVISLGLYSEAKRAQARVAQAQALGFNPGIADRKRNGNVYWIDIDLKPTDSLLNPSDLQGESGRIVRLEVKGCPTAGGQP
Ga0307475_110590661	3300031754	Hardwood Forest Soil	PNDASVISLGLYSESKRAQSRVAQAQALGFNPGIADRTRNGNVYWIDIDLKPTDGLLDPSDLQGESGRIVRLEVKGCPVSGAQQ
Ga0335078_108755973	3300032805	Soil	QTLTKLKAGGIEDALEMPGPNEGPVISLGLYSDSKRAQGRVAQAQSLGFNPALTDRKRTGDVYWIDIDLKPTDSVLKPSDLEGEAGRIVRLEVKGCPTAGATP
Ga0335081_118568232	3300032892	Soil	MPGPNETSVISLGLYSESKRAQSRVAQAQALGFNPGIADRKRTGDVYWIDIDLKPTDSVLKASDLQGEAGRIVRLEVKGCPAAGGAQP
Ga0326727_100254071	3300033405	Peat Soil	DQLLAKLKAAGIDDALEMPGPTDGSVISLGLYSEQKRAQARVAQAQALGLHPGLADRKRTGNVYWIDMDLKPTDGLPNPADLQGEAGRISRLEVDACPTAAAPP
Ga0371487_0108671_3_287	3300033982	Peat Soil	GIDDALEMPGPTDGSVISLGLYSEQKRAQARVAQAQALGLHPGLADRKRTGNVYWIDMDLKPTDGLPNPADLQGEAGRISRLEVDACPTAAAPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066511

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences