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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F066496 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 126 |
| Average Sequence Length | 48 residues |
| Representative Sequence | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFEC |
| Number of Associated Samples | 107 |
| Number of Associated Scaffolds | 126 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 99.21 % |
| % of genes from short scaffolds (< 2000 bps) | 92.86 % |
| Associated GOLD sequencing projects | 106 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (89.683 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.873 % of family members) |
| Environment Ontology (ENVO) | Unclassified (29.365 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.619 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 79.17% β-sheet: 0.00% Coil/Unstructured: 20.83% | Feature Viewer |
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| Pfam ID | Name | % Frequency in 126 Family Scaffolds |
|---|---|---|
| PF04335 | VirB8 | 3.97 |
| PF13701 | DDE_Tnp_1_4 | 0.79 |
| COG ID | Name | Functional Category | % Frequency in 126 Family Scaffolds |
|---|---|---|---|
| COG3736 | Type IV secretory pathway, component VirB8 | Intracellular trafficking, secretion, and vesicular transport [U] | 3.97 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 89.68 % |
| All Organisms | root | All Organisms | 10.32 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 15.87% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 14.29% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 10.32% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 5.56% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 4.76% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 4.76% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 3.97% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 3.17% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.17% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 3.17% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 2.38% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.38% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 2.38% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.38% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.38% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 2.38% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.59% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.59% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 1.59% |
| Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 1.59% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 1.59% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.79% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.79% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.79% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.79% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.79% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 0.79% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.79% |
| Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.79% |
| Biofilm | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm | 0.79% |
| Weathered Mine Tailings | Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings | 0.79% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.79% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
| 3300004138 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005542 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 | Environmental | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
| 3300006162 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 | Environmental | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300007982 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG | Environmental | Open in IMG/M |
| 3300009635 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 | Environmental | Open in IMG/M |
| 3300009764 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40 | Environmental | Open in IMG/M |
| 3300009824 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG | Environmental | Open in IMG/M |
| 3300010339 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3 | Environmental | Open in IMG/M |
| 3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012982 | Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield | Environmental | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014162 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG | Environmental | Open in IMG/M |
| 3300014164 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG | Environmental | Open in IMG/M |
| 3300014491 | Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG | Environmental | Open in IMG/M |
| 3300014499 | Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG | Environmental | Open in IMG/M |
| 3300014638 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG | Environmental | Open in IMG/M |
| 3300014658 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG | Environmental | Open in IMG/M |
| 3300014839 | Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
| 3300017940 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100 | Environmental | Open in IMG/M |
| 3300017948 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10 | Environmental | Open in IMG/M |
| 3300017975 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018020 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100 | Environmental | Open in IMG/M |
| 3300018024 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100 | Environmental | Open in IMG/M |
| 3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
| 3300018035 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10 | Environmental | Open in IMG/M |
| 3300018037 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10 | Environmental | Open in IMG/M |
| 3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
| 3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
| 3300018043 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 | Environmental | Open in IMG/M |
| 3300018044 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10 | Environmental | Open in IMG/M |
| 3300018046 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10 | Environmental | Open in IMG/M |
| 3300018047 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 | Environmental | Open in IMG/M |
| 3300018057 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150 | Environmental | Open in IMG/M |
| 3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
| 3300021171 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M | Environmental | Open in IMG/M |
| 3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
| 3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
| 3300021476 | Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2) | Environmental | Open in IMG/M |
| 3300023090 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24 | Environmental | Open in IMG/M |
| 3300024249 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17 | Environmental | Open in IMG/M |
| 3300026480 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027073 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes) | Environmental | Open in IMG/M |
| 3300027512 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027570 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027889 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028016 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 | Host-Associated | Open in IMG/M |
| 3300028017 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 | Host-Associated | Open in IMG/M |
| 3300028450 | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300028747 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2 | Environmental | Open in IMG/M |
| 3300028762 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3 | Environmental | Open in IMG/M |
| 3300028776 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1 | Environmental | Open in IMG/M |
| 3300028780 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2 | Environmental | Open in IMG/M |
| 3300028785 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2 | Environmental | Open in IMG/M |
| 3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
| 3300028798 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2 | Environmental | Open in IMG/M |
| 3300028808 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2 | Environmental | Open in IMG/M |
| 3300028874 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1 | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029911 | III_Bog_N2 coassembly | Environmental | Open in IMG/M |
| 3300029914 | III_Bog_E2 coassembly | Environmental | Open in IMG/M |
| 3300029944 | II_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
| 3300029999 | I_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300030043 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1 | Environmental | Open in IMG/M |
| 3300030399 | II_Palsa_E2 coassembly | Environmental | Open in IMG/M |
| 3300030503 | III_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
| 3300030629 | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030764 | Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030813 | Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031122 | Oak Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Host-Associated | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031788 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032515 | FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data) | Environmental | Open in IMG/M |
| 3300032805 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2 | Environmental | Open in IMG/M |
| 3300032896 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4 | Environmental | Open in IMG/M |
| 3300032954 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2 | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| 3300033134 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2 | Environmental | Open in IMG/M |
| 3300033402 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN | Environmental | Open in IMG/M |
| 3300033829 | Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5 | Environmental | Open in IMG/M |
| 3300034282 | Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGIcombinedJ26739_1005039043 | 3300002245 | Forest Soil | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQ |
| Ga0058905_15928122 | 3300004138 | Forest Soil | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWALQNQPVVFECIRKLFS |
| Ga0070711_1003607641 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVVFECIRKLFSF |
| Ga0070707_1001617325 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MSEKNQIVVVLIVALFLGALIDRSTAMKIVAGVVLLWTLQNQP |
| Ga0070697_1012588862 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQP |
| Ga0070732_104339683 | 3300005542 | Surface Soil | MSEKNQIVVVLIVALSLGALIDRSTALKIVAGVVLLWTLQNQPVVFECIRKL |
| Ga0070762_113064881 | 3300005602 | Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECT |
| Ga0075023_1002449421 | 3300006041 | Watersheds | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLW |
| Ga0075030_1001429505 | 3300006162 | Watersheds | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECIRKLF |
| Ga0079219_106218771 | 3300006954 | Agricultural Soil | MSEKNQIVVVLIVALSLGALIDRSTALKIVAGVVLLWTLQNQPVVF |
| Ga0102924_13361792 | 3300007982 | Iron-Sulfur Acid Spring | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECVRKLLSFV |
| Ga0116117_10990673 | 3300009635 | Peatland | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQ |
| Ga0116134_10707444 | 3300009764 | Peatland | MSERNQIVVVLIVALMLGAFVDRSTALKIVAGVALLWTLQNQPT |
| Ga0116134_11181851 | 3300009764 | Peatland | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFEC |
| Ga0116219_104892211 | 3300009824 | Peatlands Soil | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVVFECI |
| Ga0074046_104328641 | 3300010339 | Bog Forest Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLL |
| Ga0136449_1021070201 | 3300010379 | Peatlands Soil | MSDKNQIVVVLIVALFLGAFVDRATALKIVSGVVLLWSLQNQPV |
| Ga0137404_100357391 | 3300012929 | Vadose Zone Soil | VVLIVALVLGAFVDRITALKIAAGVVLLWTLQNQPVVFECIRKLFSFVQRRPSVREY |
| Ga0168317_10364131 | 3300012982 | Weathered Mine Tailings | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPVVFE |
| Ga0157378_127744231 | 3300013297 | Miscanthus Rhizosphere | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECIRKLFS |
| Ga0181538_106804992 | 3300014162 | Bog | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWT |
| Ga0181532_102504313 | 3300014164 | Bog | MSEKNQIVVVLIVALFLGALIDGSTALKIVAGVVLLWTLQNQPAVFECIRK |
| Ga0182014_105158101 | 3300014491 | Bog | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVV |
| Ga0182012_104110031 | 3300014499 | Bog | MSEKNQIVVVLIVALFLGALVDRSTALKIVAGVVLLWILQNQPTVF |
| Ga0181536_100583596 | 3300014638 | Bog | MSEKNQIVVVFIVALVLGAFVDRSTALKIVAGVVLLWTLQNQPVVFEYIRKLFSFVQRRP |
| Ga0181519_108129831 | 3300014658 | Bog | MSDKNQIVVVLIVALFLGAFVDRATALKIVSGVALLWSLQNQPAIIECVRKP |
| Ga0182027_103908774 | 3300014839 | Fen | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVVFECIRKLFSFVQR |
| Ga0182040_109370611 | 3300016387 | Soil | MSEKNQIVVVLIVSLFLGAFVDRSTALKIAAGVVLLWTLQNQPTVFECIRKLFSFVQRR |
| Ga0182037_112318841 | 3300016404 | Soil | MSEKNQIVVVLIVALFLGALVDRSTALKIAAGVVLLWSLQNQPTVFECIRKLF |
| Ga0187853_102907921 | 3300017940 | Peatland | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGIVLLWALQNQPAVFECIRKLFSF |
| Ga0187847_104567912 | 3300017948 | Peatland | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVAPLWIL |
| Ga0187782_101097894 | 3300017975 | Tropical Peatland | MSEKNQIVVVLIVALSLGAFVDRVTVVKIVAGVALLWTLQN |
| Ga0187861_104064202 | 3300018020 | Peatland | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECTRKLFSFVQR |
| Ga0187881_101730003 | 3300018024 | Peatland | MSERNQVVVVLIVALLLGAFVDRSTALRIVAGVALLWTLQNQPTVFECIRKLFSL |
| Ga0187863_101432991 | 3300018034 | Peatland | MAEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWT |
| Ga0187863_103425151 | 3300018034 | Peatland | MSERNQIVVVLIVALLLGAFIDRATALKIVAGVALRWTLQNQPT |
| Ga0187863_104330913 | 3300018034 | Peatland | MSERNQIVVVLIVALLLGAVVDRITVLKIVAGAALLWMLQNQA |
| Ga0187875_104567122 | 3300018035 | Peatland | MSEKNQIVVVLIVALFLGALVDRSTALKIVAGVVLLWTLQ |
| Ga0187875_105344601 | 3300018035 | Peatland | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALL |
| Ga0187883_104421761 | 3300018037 | Peatland | MSERNQIVVVLIVALLLGAFVDRSTALKIVAGVALLWTLQNQPTVFECIRKLFSLRRGGP |
| Ga0187855_101121201 | 3300018038 | Peatland | MSERNQIVVVLIVALMLGAFVDRSTALKIVAGVALLWTLQNQPTVFE |
| Ga0187855_104322571 | 3300018038 | Peatland | MSERNQIVVVLIVALLLGAFIDRATALKIAAGVALLWTLQNQPT |
| Ga0187871_107686391 | 3300018042 | Peatland | MSEKNQIVVVLVVALSLGAFVDRVTALKIVAGVALLWTLQNQPTVFE |
| Ga0187887_101132215 | 3300018043 | Peatland | MSERNQVVVVLIVALLLGAFVDRSTALKIVAGVALLWTLQNQPTVFECIR |
| Ga0187887_104531583 | 3300018043 | Peatland | MSERNQVVVVLIVALLLGAFVDRSTALKIVAGVALLWTLQNQP |
| Ga0187890_103806003 | 3300018044 | Peatland | MSERNQIVVVLIVALVLGAFVDRATALKIVAGVALLWTLQNQPTIYECIRKLFSSRR |
| Ga0187851_101343581 | 3300018046 | Peatland | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPAVFECIRKLF |
| Ga0187859_102125313 | 3300018047 | Peatland | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVF |
| Ga0187859_103346831 | 3300018047 | Peatland | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPA |
| Ga0187858_101053801 | 3300018057 | Peatland | MSERNQVVVVLIVALLLGAFVDRSTALKIVAGVALLWTLQNQPTVFECIRKLFSLRR |
| Ga0187784_103144921 | 3300018062 | Tropical Peatland | MSERNQIVVVLIVALLLGAFIDRATALKIVAGVALLWTLQNQPTVFE |
| Ga0210403_102421971 | 3300020580 | Soil | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWALQNQPVVVECIRKLFSFVQ |
| Ga0210403_114482062 | 3300020580 | Soil | MSEKNQIVVVLIVALFLGALIDRSTALNIVAGVVLLWTL |
| Ga0210395_100907251 | 3300020582 | Soil | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALLWTLQNQPTVFECIRKVFSLSR |
| Ga0210395_107450632 | 3300020582 | Soil | MSERNQIVVVLIVALLLEAVVDRITVLKIVAGAALLWMLQNQSAVL |
| Ga0210405_102791621 | 3300021171 | Soil | MSEKNQIVVVLIVALFLGAFVDRITALNIVAGVVLLWTLQNQPAVFECTRKLFSFVQRRP |
| Ga0210393_108568702 | 3300021401 | Soil | MSEKNQIVVVLIVALVLGAFIDRATALKIVVGVALLWSLQNQSAIV |
| Ga0210391_113299391 | 3300021433 | Soil | MSDKNQIVVVLIVALFLGAFVDRATALKIVSGVVLLWSLQ |
| Ga0210391_114755342 | 3300021433 | Soil | MSEKNQIVVVLIVSLFLGAFIDRATALKIVVGVALLWSLQNQLAIID |
| Ga0210391_115166531 | 3300021433 | Soil | MSERNQIVVVLIVALLLGAFVDRSTALKIVAGVALLWTLQNQPTVF |
| Ga0210391_115709551 | 3300021433 | Soil | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVAL |
| Ga0187846_103866192 | 3300021476 | Biofilm | MSEKNQIVVVLIVALFLGALVDRSTALKIAAGVVLLWSLQN |
| Ga0224558_12265992 | 3300023090 | Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECIR |
| Ga0247676_10497452 | 3300024249 | Soil | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVVF |
| Ga0257177_10609631 | 3300026480 | Soil | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLW |
| Ga0179587_101826154 | 3300026557 | Vadose Zone Soil | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQPTV |
| Ga0208366_10121381 | 3300027073 | Forest Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPVVFECIRKLF |
| Ga0209179_11517651 | 3300027512 | Vadose Zone Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECIRKLFSFV |
| Ga0208043_10813131 | 3300027570 | Peatlands Soil | MSEKNQIVVVLIVALFLGALIDRSTALKIVAGVVLLWTLQNQPVVFECIRKLFS |
| Ga0209736_10166641 | 3300027660 | Forest Soil | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQPVVFECIRKLFS |
| Ga0209274_107212062 | 3300027853 | Soil | MSERNQIVVVLIVSLLLGAFVDRSTALKIVAGVALLWTLQNQPTVFECIRKLFS |
| Ga0209380_100917031 | 3300027889 | Soil | MPEKNQIVVVLIVALVLGAFIDRATALKIVVGVALLWSLQNQSAIVECIRKLF |
| Ga0209006_103962731 | 3300027908 | Forest Soil | MSERNQIVVVLIVSLLLGAFVDRSTALKIVAGVALLWTLQNQPTV |
| Ga0265354_10245341 | 3300028016 | Rhizosphere | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALLWTLQNQPTVFECIRKVFSLMRG |
| Ga0265356_10208732 | 3300028017 | Rhizosphere | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECTRKL |
| Ga0189898_10324652 | 3300028450 | Peatlands Soil | MSEKNQIVVVLIVALFLGALIDRSTALNIVAGVVLLWTLQNQPVVFECIRKLFSFVQR |
| Ga0302219_102436441 | 3300028747 | Palsa | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALLWTLQNQP |
| Ga0302219_102512752 | 3300028747 | Palsa | MSERNQIVVVLIVSLLLGAFVDRSTALKIVAGVALLWTLQNQPTVFECIRKLFSLRRG |
| Ga0302202_103501341 | 3300028762 | Bog | MSERNQVVVVLIVALLLGAFVDRSTALKIVAGVALLWTLQNQSTVFECVRKLFSLRRE |
| Ga0302303_100335951 | 3300028776 | Palsa | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECTRKLFSFVQRRP |
| Ga0302303_102324831 | 3300028776 | Palsa | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECARK |
| Ga0302225_105232491 | 3300028780 | Palsa | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQPVVFECTR |
| Ga0302201_100716775 | 3300028785 | Bog | MSERNQVVVVLIVALLLGAFVDRSTALKIVAGVALLWTL |
| Ga0307504_100877391 | 3300028792 | Soil | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQPTVFECIRKLFSFVQ |
| Ga0302222_102918542 | 3300028798 | Palsa | MSEKNQIVVVLIVALFLGAFLDRITALKIVAGVVLLWTLQNQPAVFECTRKLFSFVQRR |
| Ga0302222_104155961 | 3300028798 | Palsa | MSEKNQIVVVLIVALLLGAFIDRATALKIVVGVALLW |
| Ga0302228_102740181 | 3300028808 | Palsa | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECTRKLFSFVQRRPLV |
| Ga0302155_100996031 | 3300028874 | Bog | MSERNQVVVVLIVALLLGAFVDRSTALKIVAGVALLW |
| Ga0308309_103372441 | 3300028906 | Soil | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALLW |
| Ga0308309_111362481 | 3300028906 | Soil | MSERNQIVVVLIVALLLGAVVDRITVLKIVAGAALLWMLQNLSAILECIRKLSS |
| Ga0308309_119103341 | 3300028906 | Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVLLLW |
| Ga0311361_110938841 | 3300029911 | Bog | MSERNQVVVVLIVALLLGAFVDRITILKVVAGTVLLWMLQNQP |
| Ga0311361_112307591 | 3300029911 | Bog | MSEKNQIVVVLIVALFLGALIDRSTALKTVAGVVLLWTLQNQPVV |
| Ga0311359_108232992 | 3300029914 | Bog | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECIRK |
| Ga0311352_108443831 | 3300029944 | Palsa | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQP |
| Ga0311371_110666093 | 3300029951 | Palsa | MSERNQIVVVLIVALLLGAFIDRATALKIVAGVALLWTLQNQPTVFECIRKLFSLRRGGP |
| Ga0311339_105330113 | 3300029999 | Palsa | MSEKNQIVVVLIVALFLGAFLDRITALKIVAGVVLLWTLQNQPAVFECTRKLFSFVQR |
| Ga0311338_112679501 | 3300030007 | Palsa | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVL |
| Ga0302306_102563271 | 3300030043 | Palsa | MSEKNQIVVVLIVALFLGAFLDRITALKIVAGVVLLWTLQNQPAVFECT |
| Ga0311353_111191452 | 3300030399 | Palsa | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQPAVFECIRKLFSFVQ |
| Ga0311370_115976601 | 3300030503 | Palsa | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQN |
| Ga0311356_118343311 | 3300030617 | Palsa | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECTRK |
| Ga0210268_10074852 | 3300030629 | Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFECTRKLFSFVDGLRFGSTAEA |
| Ga0265720_10256632 | 3300030764 | Soil | MSEKNQIVVVLIVALFLGAFVGRITALKIVAGVVLLWTLQNQP |
| Ga0265750_10611152 | 3300030813 | Soil | MSDRNQIVVVLIVSLLLGAFVDRSTALKIVAGVALLWTLQ |
| Ga0170834_1100634481 | 3300031057 | Forest Soil | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALLWTLQ |
| Ga0170822_166713953 | 3300031122 | Forest Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQP |
| Ga0302325_108499081 | 3300031234 | Palsa | MSEKNQIVVVLIVALFLGAFLDRITALKIVAGVVLLWTLQNQPAVF |
| Ga0170818_1041324451 | 3300031474 | Forest Soil | MSEKNQIVVVLIVALFLGAFIDRITALKIVAGVVLLWILQNQPVVFECIRKLFSFVQR |
| Ga0302326_107737594 | 3300031525 | Palsa | MSDENQIVVVLIVALFLGAFVDRATALKIVSGVVLLWSLQNQPVIIECVRKLYSHFR |
| Ga0265313_103096931 | 3300031595 | Rhizosphere | MSEKNQIVVVLVVALSLGAFVDRITALKIVAGVALLWTLQN |
| Ga0310686_1092296782 | 3300031708 | Soil | MSERNQIVVVLVVALLLGALIDRTTAVKIVAGVALLWMLQNQPTVFEC |
| Ga0302319_119529202 | 3300031788 | Bog | MSERNQVVVVLIVALLLGAFVDRITILKVVAGTVLLWMLQNQPTVL |
| Ga0307473_103798891 | 3300031820 | Hardwood Forest Soil | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQKQPAVFECIRKLFSFVQ |
| Ga0306921_111918361 | 3300031912 | Soil | MSERNQIVVVLIVALLLGAFIDRATALKIVAGVALLWTL |
| Ga0307479_110586703 | 3300031962 | Hardwood Forest Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPVVFECIR |
| Ga0348332_128252372 | 3300032515 | Plant Litter | MSEKNQIVVVLIAALFLGAFVDRSTALKIVAGVALLWTLQNQPAVFE |
| Ga0335078_114176632 | 3300032805 | Soil | MSERNQIVVVLIVALLLGAFVDRGTALKIVAGVALLW |
| Ga0335075_101653501 | 3300032896 | Soil | MSDKNQIVVVLIVALFLGAFVDRATALKIVAGVVLLWSLQNQPVIIECARRLSSHFRGGLTVR |
| Ga0335075_107048791 | 3300032896 | Soil | MSDKNQIVVVLIVALFLGAFVDRATALKIVSGVALLWSLQNQPVIIECVRKL |
| Ga0335083_110725272 | 3300032954 | Soil | MSERNQIVVVLIVALLLGAFIDRATALKIVAGVALLWTLQNQPTVFDCIRKLFSLRR |
| Ga0335076_117815072 | 3300032955 | Soil | MSEKNQLVVVLIVALFLGAFVDRSTALKIGAGVVLLWTL |
| Ga0335073_116849602 | 3300033134 | Soil | MSEKNQIVVVLIVSLFLGAFIDRATALKIVVGVALLWSLQNQSAIIACIRKLSSYRRRGL |
| Ga0326728_100789111 | 3300033402 | Peat Soil | MSERNQIVVVLIVALMLGAFVDRSTALKIVAGVALL |
| Ga0334854_088759_2_163 | 3300033829 | Soil | MSEKNQIVVVLIVALFLGAFVDRITALKIVAGVVLLWTLQNQPAVFESTRKLFS |
| Ga0370492_0362488_462_587 | 3300034282 | Untreated Peat Soil | MSEKNQIVVVLIVALVLGAFVDRITALKIVAGVVLLWTLQNQ |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |