Metagenome / Metatranscriptome Family F066381

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066381
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	59 residues
Representative Sequence	MADTTQKTYTITYAEGKTITAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Number of Associated Samples	75
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.00 %
% of genes near scaffold ends (potentially truncated)	25.40 %
% of genes from short scaffolds (< 2000 bps)	88.10 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.048 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (23.016 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.032 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.70% Coil/Unstructured: 59.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00166	Cpn10	47.62
PF00012	HSP70	26.19
PF00118	Cpn60_TCP1	6.35
PF02706	Wzz	2.38
PF00072	Response_reg	0.79
PF12779	WXXGXW	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	47.62
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	26.19
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	6.35
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	2.38
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	2.38
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	2.38
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	2.38

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.05 %
Unclassified	root	N/A	30.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.05 %
Unclassified	root	N/A	30.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.05 %
Unclassified	root	N/A	30.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	28.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.56 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.38 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.38 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.38 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.79 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.79 %
Puniceicoccales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.38 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.79 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.79 %
Puniceicoccaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae	0.79 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.79 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.38 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.79 %
Coraliomargarita	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita	0.79 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.79 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.79 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.38 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita → environmental samples	0.79 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	0.79 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.79 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.79 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2.38 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	0.79 %
Coraliomargarita sp. CAG:312	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita → environmental samples → Coraliomargarita sp. CAG:312	0.79 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.79 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.79 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003320\|rootH2_10149980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1402	Open in IMG/M
3300004635\|Ga0062388_101890095	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005640\|Ga0075035_1447941	Not Available	523	Open in IMG/M
3300005650\|Ga0075038_11194043	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005994\|Ga0066789_10159078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	958	Open in IMG/M
3300009500\|Ga0116229_10010908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13537	Open in IMG/M
3300009500\|Ga0116229_10084533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2916	Open in IMG/M
3300009500\|Ga0116229_10412908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1126	Open in IMG/M
3300009500\|Ga0116229_10633642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300009500\|Ga0116229_10755016	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300009627\|Ga0116109_1137775	Not Available	551	Open in IMG/M
3300009633\|Ga0116129_1090915	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300009661\|Ga0105858_1177129	Not Available	615	Open in IMG/M
3300009709\|Ga0116227_10167802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Coraliomargarita → environmental samples → Coraliomargarita sp. CAG:312	1722	Open in IMG/M
3300009787\|Ga0116226_10079097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3373	Open in IMG/M
3300009787\|Ga0116226_10274789	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300011418\|Ga0153954_1160244	Not Available	559	Open in IMG/M
3300014168\|Ga0181534_10108445	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300014168\|Ga0181534_10321883	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300014169\|Ga0181531_10470734	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300014201\|Ga0181537_10634628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	728	Open in IMG/M
3300014201\|Ga0181537_11207366	Not Available	511	Open in IMG/M
3300014489\|Ga0182018_10158039	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1292	Open in IMG/M
3300014489\|Ga0182018_10221288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1051	Open in IMG/M
3300014489\|Ga0182018_10501471	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300014493\|Ga0182016_10493588	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300014493\|Ga0182016_10792871	Not Available	527	Open in IMG/M
3300014495\|Ga0182015_10113663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1867	Open in IMG/M
3300014495\|Ga0182015_10266923	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300014496\|Ga0182011_10230675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1249	Open in IMG/M
3300014499\|Ga0182012_10636329	Not Available	684	Open in IMG/M
3300014501\|Ga0182024_10006995	All Organisms → cellular organisms → Bacteria	24525	Open in IMG/M
3300014501\|Ga0182024_10759627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1188	Open in IMG/M
3300014501\|Ga0182024_12230477	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300014838\|Ga0182030_10214853	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2267	Open in IMG/M
3300014838\|Ga0182030_10258781	Not Available	1977	Open in IMG/M
3300014838\|Ga0182030_10776519	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300014838\|Ga0182030_10980923	Not Available	746	Open in IMG/M
3300014969\|Ga0157376_12839533	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300015206\|Ga0167644_1061121	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300020034\|Ga0193753_10213237	Not Available	878	Open in IMG/M
3300020061\|Ga0193716_1025188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2949	Open in IMG/M
3300021433\|Ga0210391_11250958	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300021475\|Ga0210392_10534700	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300021475\|Ga0210392_11072872	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300026291\|Ga0209890_10156807	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300027860\|Ga0209611_10000111	All Organisms → cellular organisms → Bacteria	92414	Open in IMG/M
3300027860\|Ga0209611_10007914	All Organisms → cellular organisms → Bacteria	16870	Open in IMG/M
3300027860\|Ga0209611_10119664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1725	Open in IMG/M
3300028036\|Ga0265355_1001351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1575	Open in IMG/M
3300028745\|Ga0302267_10058693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2093	Open in IMG/M
3300028748\|Ga0302156_10484132	Not Available	529	Open in IMG/M
3300028765\|Ga0302198_10518716	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028854\|Ga0302268_1129895	Not Available	615	Open in IMG/M
3300028866\|Ga0302278_10219027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	932	Open in IMG/M
3300028873\|Ga0302197_10207113	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300029882\|Ga0311368_10037570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4536	Open in IMG/M
3300029908\|Ga0311341_10267065	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300029908\|Ga0311341_10803443	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300029910\|Ga0311369_10706601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300029911\|Ga0311361_10059167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	5998	Open in IMG/M
3300029911\|Ga0311361_10079274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4878	Open in IMG/M
3300029911\|Ga0311361_10300072	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300029911\|Ga0311361_10818632	Not Available	820	Open in IMG/M
3300029911\|Ga0311361_11042528	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300029911\|Ga0311361_11135354	Not Available	634	Open in IMG/M
3300029913\|Ga0311362_11187886	Not Available	570	Open in IMG/M
3300029914\|Ga0311359_11173316	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300029915\|Ga0311358_10308344	Not Available	1338	Open in IMG/M
3300029922\|Ga0311363_10571865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1120	Open in IMG/M
3300029922\|Ga0311363_10847104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	832	Open in IMG/M
3300029922\|Ga0311363_11153849	Not Available	659	Open in IMG/M
3300029945\|Ga0311330_10093545	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300029951\|Ga0311371_10678422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1301	Open in IMG/M
3300029951\|Ga0311371_12088276	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300029955\|Ga0311342_10468868	Not Available	1066	Open in IMG/M
3300029999\|Ga0311339_10569022	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300030007\|Ga0311338_11113091	Not Available	757	Open in IMG/M
3300030041\|Ga0302274_10246009	Not Available	856	Open in IMG/M
3300030044\|Ga0302281_10395618	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300030503\|Ga0311370_10812454	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300030503\|Ga0311370_10943963	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300030503\|Ga0311370_11590545	Not Available	678	Open in IMG/M
3300030503\|Ga0311370_11734319	Not Available	638	Open in IMG/M
3300030520\|Ga0311372_11369250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	886	Open in IMG/M
3300030520\|Ga0311372_11449049	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300030520\|Ga0311372_11955900	Not Available	690	Open in IMG/M
3300030520\|Ga0311372_12545841	Not Available	573	Open in IMG/M
3300030566\|Ga0257186_1010876	Not Available	1133	Open in IMG/M
3300030688\|Ga0311345_11326796	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300030908\|Ga0074005_13078218	Not Available	621	Open in IMG/M
3300030938\|Ga0138299_10410467	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300030938\|Ga0138299_10712803	Not Available	541	Open in IMG/M
3300031022\|Ga0138301_1311888	Not Available	532	Open in IMG/M
3300031027\|Ga0302308_10768480	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031234\|Ga0302325_10921463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1209	Open in IMG/M
3300031234\|Ga0302325_10992746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1148	Open in IMG/M
3300031234\|Ga0302325_12105767	Not Available	691	Open in IMG/M
3300031234\|Ga0302325_12390060	Not Available	635	Open in IMG/M
3300031236\|Ga0302324_100490549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1798	Open in IMG/M
3300031236\|Ga0302324_100707026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1421	Open in IMG/M
3300031236\|Ga0302324_100856975	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300031236\|Ga0302324_101276323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	972	Open in IMG/M
3300031236\|Ga0302324_102082993	Not Available	709	Open in IMG/M
3300031236\|Ga0302324_102502078	Not Available	630	Open in IMG/M
3300031259\|Ga0302187_10082368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1885	Open in IMG/M
3300031524\|Ga0302320_10356418	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300031524\|Ga0302320_10805032	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300031524\|Ga0302320_11392485	Not Available	699	Open in IMG/M
3300031524\|Ga0302320_11867098	Not Available	570	Open in IMG/M
3300031525\|Ga0302326_11477202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	912	Open in IMG/M
3300031525\|Ga0302326_12004172	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300031525\|Ga0302326_12260988	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300031525\|Ga0302326_12849391	Not Available	596	Open in IMG/M
3300031708\|Ga0310686_102615149	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300031708\|Ga0310686_108949506	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300031788\|Ga0302319_10227635	Not Available	2303	Open in IMG/M
3300031788\|Ga0302319_10307087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1854	Open in IMG/M
3300032120\|Ga0316053_120207	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300032579\|Ga0316228_1217400	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300032605\|Ga0316232_1105734	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300033402\|Ga0326728_10598787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	860	Open in IMG/M
3300033888\|Ga0334792_033302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1711	Open in IMG/M
3300034199\|Ga0370514_037621	Not Available	1208	Open in IMG/M
3300034282\|Ga0370492_0389349	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.30%
Host-Associated	Host-Associated	12.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.37%
Plants	Host-Associated → Plants	11.11%
Aquatic	Environmental → Aquatic	7.94%
Human	Host-Associated → Human	0.79%
Fungi	Host-Associated → Fungi	0.79%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	50.79%
Soil	Environmental → Terrestrial → Soil	28.57%
Peat Moss	Host-Associated → Plants → Peat Moss	8.73%
Freshwater	Environmental → Aquatic → Freshwater	7.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.59%
Digestive System	Host-Associated → Human → Digestive System	0.79%
Rhizome	Host-Associated → Plants → Rhizome	0.79%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	50.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	10.32%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	8.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.35%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.59%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.79%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	50.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	16.67%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	8.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.76%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.59%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.79%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	23.02%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	23.02%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	8.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.56%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.97%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.17%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.38%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.79%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.79%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030566	Metatranscriptome of decayed wood fungal communities from Pinus contorta in Bitterroot National Forest, Montana, United States - GP2-1 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030908	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Litter TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030938	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_OS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH2_101499802	3300003320	Sugarcane Root And Bulk Soil	MAEETAAEAAPQKTYLITSADGKTIQASAESIAWTENGEFILLMDGETTKHVVVAANVIAVTEQ*
Ga0062388_1018900951	3300004635	Bog Forest Soil	MSDESVPKTYKIVCSDSSFEAKAESVAWSENGEFILLLDGDNVKHVIVAANVIAVTEV*
Ga0075035_14479412	3300005640	Permafrost Soil	MSETTEQKTYTITYAEGKTVSAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTEQS
Ga0075038_111940432	3300005650	Permafrost Soil	EKTYTITSTDGKSFTASAESIAWTENGEFILLMVGEETKHVIVAANVVAVTEK*
Ga0066789_101590782	3300005994	Soil	MSDNTEKTYTITYAEGKTVSAKAESIAWTENGEFILLMEGEDTKHVIVAANVIAVTES*
Ga0116229_100109082	3300009500	Host-Associated	MADETTVEAAPQKNYVINYADGKSIQASAESIAWTENGEFILLMDGETTKHVVVAANVIAVTEK*
Ga0116229_100845332	3300009500	Host-Associated	MSDATVQKTYKITYSESSFEASAESIAWTENGEFILLMNGEETKHVIVAANVIAVTEQ*
Ga0116229_104129081	3300009500	Host-Associated	MSDNSVLKTYTITYAEGKSISAKAESIAWTENGEFILLMNGEETKHVIVAANVVAVTES*
Ga0116229_106336421	3300009500	Host-Associated	MADTTEKTYIITYAEGKTVSAKAESIAWTENGEFILLMVGEDTKHVIVAANVVAVTEQ*
Ga0116229_107550161	3300009500	Host-Associated	MADTQKTYLITYADGKTIQASAESIAWTENGEFILLMDGETTKHVVVAENVIAVTEK*
Ga0116109_11377751	3300009627	Peatland	MAEETAEAAPQKTYLITSADGKTIQASAESIAWTENGEFILLMDGETTKHVIVAANVVAVTEK*
Ga0116129_10909152	3300009633	Peatland	MADTTEKTYTITYEGGKTVAAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ*
Ga0105858_11771292	3300009661	Permafrost Soil	MADTTEKTYTITYEGGKTVSAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTES*
Ga0116227_101678023	3300009709	Host-Associated	MADTTEKTYTITYAEGKTVTAKAESVAWTENGEFILLMNGEDTKHVIVAANVIAVTEQ*
Ga0116226_100790973	3300009787	Host-Associated	MAETSASKKYLINYADGKTIQASAESIAWTENGEFILLMDGETTKHVIVAENVIAVTEQ*
Ga0116226_102747892	3300009787	Host-Associated	MAEASAQKSYVINYADGKTIAVEAESVAWTENGEFILLMVGETTKHVIVAANVIAVTEK*
Ga0153954_11602442	3300011418	Attine Ant Fungus Gardens	MADTQKTYTITYAEGKTTTAKAESIAWTENGEFILLMDGENTKHVIVAENVIAVTES*
Ga0181534_101084452	3300014168	Bog	MSEETSLKTYNIVYGDNTITATADSLAWTENGEFILLMDGEETKHVIVAANVIAVLEQ*
Ga0181534_103218832	3300014168	Bog	MADTTEKTYTITYAEGKTLTAKAESIAWTENGEFILLMNGEDTKHVIVAANVVAVTEA*
Ga0181531_104707342	3300014169	Bog	MSDKTDQKTYHIVYEGKTITAQAQSIAWTEDSHFILLMDGETAKHVIVAANVIAVTEE*
Ga0181537_106346283	3300014201	Bog	ETSEQKTYKITYADKSLEAKAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEA*
Ga0181537_112073661	3300014201	Bog	MADTTEKSYTITYAEGKTVTAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ*
Ga0182018_101580392	3300014489	Palsa	MADTTQKTYTITYAEGKTVSAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTES*
Ga0182018_102212883	3300014489	Palsa	TTEKTYTITYAEGKTVTAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTES*
Ga0182018_105014712	3300014489	Palsa	MADKTEKTYTITYAEGKTVSAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTES*
Ga0182016_104935882	3300014493	Bog	QKMSDNVLKTYKITYTEGKTIEAKAESIAWTENGEFILLMEGEDTKHVVVAANVIAVTEQ
Ga0182016_107928712	3300014493	Bog	MSESTGQKTYTITFAEGKSISAKAESVAWTENGEFILLMDGETTKHVIVAANVIAVTEHS
Ga0182015_101136634	3300014495	Palsa	MSETTGEKTYKIVCSDKVITVQAESIAWSENGELILLMVGEEAKHVIVAANVIAVTEQ*
Ga0182015_102669232	3300014495	Palsa	MADTTQKTYTITYAEGKTITAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES*
Ga0182011_102306752	3300014496	Fen	MSEATSQKTYTITYAEGKTVSAKAESIAWTENGEFILLMDGEDTKHVIVAANVIAVTEQS
Ga0182012_106363292	3300014499	Bog	MADTTEKTYTITYEGGKTVTAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEN*
Ga0182024_100069952	3300014501	Permafrost	MADTTEKTYTITYAEGKTLSAKAESIAWTENGEFILLMNGEDTKHVIVAANVVAVTEA*
Ga0182024_107596272	3300014501	Permafrost	MSETTEQKTYIITYAEGKTVSAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTEQS
Ga0182024_122304772	3300014501	Permafrost	KKMSDETTSQKTYHIVCKDKTLTVQAESVAWSENGEFILLMVGEDARHVVVAANVIAVTEQ*
Ga0182030_102148532	3300014838	Bog	MADTTEKTYNITYAEGKTITVSAESVAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ*
Ga0182030_102587812	3300014838	Bog	MSETTGRKTYTITFAEGKTTTAKAESVAWTENGEFILLMNGEETKHVIVAANVIAVTEQS
Ga0182030_107765192	3300014838	Bog	MSDTSVQKTYKITYAEGSFEATAESIAWTENGEFILLMIGEETKHLIVAANVIAVTEQ*
Ga0182030_109809231	3300014838	Bog	MADTSAQKTYVINYADGKSISASAESIAWTENGEFILLMDGETTKHVIVAANVFAVTEK*
Ga0157376_128395331	3300014969	Miscanthus Rhizosphere	MKTYTITYKEKSTITVKATSVAWTENGLFILLMDGETVKHVVVAANVIAVTEA*
Ga0167644_10611212	3300015206	Glacier Forefield Soil	MADTTEKTYTITYEGGKTVTAKAESIAWTENGEFILLMNGEDTKHVIVAANVVAVTEN*
Ga0193753_102132371	3300020034	Soil	MSDKTEQKTYKITYADKSIEAKADSIAWTENGEFILLMDGENTKHVIVAANVIAVTEQ
Ga0193716_10251882	3300020061	Soil	MADTTQKTYTITYAEGKTISAKAESIAWTENGEFILLMDGEETKHVIVAASVIAVTES
Ga0210391_112509581	3300021433	Soil	NRKKGKTKTMADTTEKTYTITYAEGKTISAQAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEN
Ga0210392_105347002	3300021475	Soil	MADTTEKTYTITYAEGKTITAKAESVAWTENGEFILLMVGEDTKHVIVAANVIAVTAS
Ga0210392_110728722	3300021475	Soil	EMADTTEKTYTITYAEGKTTTAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Ga0209890_101568072	3300026291	Soil	MSDNTEKTYTITYAEGKTVSAKAESIAWTENGEFILLMEGEDTKHVIVAANVIAVTES
Ga0209611_1000011175	3300027860	Host-Associated	MADETTVEAAPQKNYVINYADGKSIQASAESIAWTENGEFILLMDGETTKHVVVAANVIAVTEK
Ga0209611_100079149	3300027860	Host-Associated	MSDATVQKTYKITYSESSFEASAESIAWTENGEFILLMNGEETKHVIVAANVIAVTEQ
Ga0209611_101196643	3300027860	Host-Associated	NNMSDNSVLKTYTITYAEGKSISAKAESIAWTENGEFILLMNGEETKHVIVAANVVAVTE
Ga0265355_10013512	3300028036	Rhizosphere	MSDTTEKTFTITYAEGKTLTAQAESIAWTENGEFILLMNGEETKHVIVAANVIAVTEQS
Ga0302267_100586931	3300028745	Bog	MADTTEKTYTITYGETGKTLVAQAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Ga0302156_104841321	3300028748	Bog	MSEETTQKTYNIVYGDNTITATADSLAWTENGEFILLMDGEETKHVIVAANVIAVLEQ
Ga0302198_105187162	3300028765	Bog	QKTNMADTTEKTYTITYGETGKTLVAQAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Ga0302189_102168832	3300028788	Bog	MSEETTQKTYNIVYGDNTITATADSLAWTENGEFILLMDGEET
Ga0302268_11298952	3300028854	Bog	MSETTEQKTYNIVYGDKTITAKAESIAWTENGEFILLMDGEDAKHIIVAANVIAVTEQS
Ga0302278_102190271	3300028866	Bog	MAETSEQKTYKITYGDGKSSEAKAESIAWTENGEFILLMDGDNTKHVIVAANVISVTEQ
Ga0302197_102071132	3300028873	Bog	MSDTTEKTYTITYTEGKSITATAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTEQ
Ga0311368_100375703	3300029882	Palsa	MSDTSAQKTYTITYAEGKTVAAKAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEQ
Ga0311341_102670652	3300029908	Bog	MSEETTQKTYNIVYGDNTITATADSLAWTENGEFILLMDGEETKHVIVAANVIAVTEQ
Ga0311341_108034432	3300029908	Bog	QKNYVINYADGKSIQASAESIAWTENGEFILLMDGETTKHVVVAANVIAVTEK
Ga0311369_107066011	3300029910	Palsa	MADTTEKKYTITYAEGKTVFAKAESIAWTENGEFILLMNGEETKHVIVAANVVAVTEA
Ga0311361_100591673	3300029911	Bog	MTTEAPTEKTYSIVTKDKTYSAKAGSIAWTENGLFILLMNGDETKHVIVSANVIAVTED
Ga0311361_100792745	3300029911	Bog	MAETSEQKNYTITYAEGKTISAKADSIAWTENGEFILLMNGEETKHVIVAANVIAVVED
Ga0311361_103000722	3300029911	Bog	MSDEIQLKTYKITYAEKEITAEAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ
Ga0311361_108186322	3300029911	Bog	MSEETTEQKAVQKTFKVTCTDKTLTAQAESLAWTENGEFILLMDGEDVKHVIVAANVIAVTTEQT
Ga0311361_110425282	3300029911	Bog	MADTTQKTYTITYAEGKTVSAKAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ
Ga0311361_111353542	3300029911	Bog	MAETSEQKTYTITSADGKTISAKAESIAWTENGEFILLMDGDNTKHVVVAANVIAVVEE
Ga0311362_111878861	3300029913	Bog	MTTETPTEKTYSIVTKDKTYSAKAGSIAWTENGLFILLMNGDETKHVIVSANVIAVTED
Ga0311359_111733162	3300029914	Bog	DTTEKTYTITYTEGKSITATAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTEQ
Ga0311358_103083441	3300029915	Bog	MSDEIQLKTYKITYAEKEITAEAESIAWTENGEFILLMVGEDTKHVIVASNVIAVTEDPTPKE
Ga0311363_105718651	3300029922	Fen	CQVNQPKTGKQNIMAETSEQKTYTITSADGKTISAKAESIAWTENGEFILLMDGDNTKHVVVAANVIAVVEE
Ga0311363_108471043	3300029922	Fen	STGNREQTMSDTTEKTYTITYTEGKSITATAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTEQ
Ga0311363_111538491	3300029922	Fen	MSDNTQKNYIITYAEGKTVSAQAESIAWTENGEFILLMNGEDTKHIIVAA
Ga0311330_100935453	3300029945	Bog	MSEETTQKTYNIVYGDNTITATADSLAWTENGEFILLMDGEETKHVIVAANVI
Ga0311371_106784223	3300029951	Palsa	SAQKTYTITYAEGKTVAAKAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEQ
Ga0311371_120882762	3300029951	Palsa	MSDNSVQKTYTITYAEGKSITASAESIAWTENGEFILLMNGEETKHVIVAANVVAVTEQ
Ga0311342_104688681	3300029955	Bog	MADTTEKTYTITYGETGKTLVAQAESIAWTENGEFILLMNGEETKHVIVAANV
Ga0311339_105690222	3300029999	Palsa	MSDASTQKTYTITYAEGKTVAAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTEQ
Ga0311338_111130913	3300030007	Palsa	MADTDKTYTITSTDGKSFTVTAESIAWTENGEFILLMVGEETKHVIVAANVVAVTEA
Ga0302274_102460092	3300030041	Bog	MSEETTEQKVEQKTFKIVYGDKTITAQAESLAWTENGEFILLMDGEDAKHVIVAANVIAVTTEQQ
Ga0302281_103956182	3300030044	Fen	RREKGQKMSEETTEQKVEQKTFKIVYGDKTITAQAESLAWTENGEFILLMDGEDAKHVIVAANVIAVTTEQQ
Ga0311370_108124542	3300030503	Palsa	MADTTEKTYTITSTDGKSFTASAESIAWTENGEFILLMVGEETKHVVVAANVVAVTEK
Ga0311370_109439631	3300030503	Palsa	MSDTASQKTYTITYEAGKTITATAQSVAWTENGEFILLMDGENTKHVIVAANVVAVTEQ
Ga0311370_115905452	3300030503	Palsa	MADTTEKKYTITYAEGKTVFAKAESIAWTENGEFILLMNGEETKHVIVAANVVAVTET
Ga0311370_117343192	3300030503	Palsa	MADTDKTYTITSTDGKSFTVTAESIAWTENGEFILLMVGEETKHVIVAANVVAVTEK
Ga0311372_113692503	3300030520	Palsa	NFGDRQNPKKTNMADTDKTYTITSTDGKSFTVTAESIAWTENGEFILLMVGEETKHVIVAANVVAVTEK
Ga0311372_114490492	3300030520	Palsa	MAEEETTAAPQKNYVINYADGKTIQASAESIAWTENGEFILLMDGETTKHVIVAANVIAVTEK
Ga0311372_119559001	3300030520	Palsa	MSDKTEKTYTITYAEGKTATAKAESIAWTENGEFILLMDGEDTKHVIVAANVIAVTES
Ga0311372_125458411	3300030520	Palsa	VKTYNITYKEKTAITVKATSVAWTENGLFILLMDGETVKHVVVAANVIAVTEA
Ga0257186_10108763	3300030566	Host-Associated	MSDSTVLKTYKITYADKTLEAKAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEQ
Ga0311345_113267962	3300030688	Bog	KTKGKSKMSDNSVQKSYTITYAEGKTVSAKAESIAWTENGEFILLMNGEETKHVIVAANVIAVTEQ
Ga0074005_130782181	3300030908	Soil	MADTTTKTYTITYAEGKSISAKAESIAWTENGEFILLMNGEETKHVIVAANVVAVT
Ga0138299_104104671	3300030938	Soil	MADNNVLKTYKITYAEGKTVDTKAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEQ
Ga0138299_107128031	3300030938	Soil	MADQKSYKVTYADGKTLEAKAESVAWTENGEFILLMDGENTKHVIVAANVIAVIEQ
Ga0138301_13118881	3300031022	Soil	MAETSEQKNYTITYAEGKTISAKAESIAWTENGEFILLMDGEETKHVIVAANVIAVVQD
Ga0302308_107684801	3300031027	Palsa	ADTTEKTYTITSTDGKSFTASAESIAWTENGEFILLMVGEETKHVVVAANVVAVTEK
Ga0302325_109214633	3300031234	Palsa	MADTTPKTYTITYAEGKTITAKAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Ga0302325_109927461	3300031234	Palsa	KKYTITYAEGKTVFAKAESIAWTENGEFILLMVGEETKHVIVAANVIAVTED
Ga0302325_121057672	3300031234	Palsa	MSETTGQKTYKIVYADKSITAEAESIAWTENGEFILLMDGETTKHVIVAANVIAVTEQS
Ga0302325_123900601	3300031234	Palsa	MAETSELKTYTITSADGKTISAKAESIAWKENGEFILLMDGENTKHVIVAENVIAVVEE
Ga0302324_1004905493	3300031236	Palsa	MADTTEKKYTITYAEGKTVFAKAESIAWTENGEFILLMVGEETKHVIVAANVIAVTED
Ga0302324_1007070263	3300031236	Palsa	MSETTEEKTYNIIYTDKTVTAKAQSIAWTEDCQFILLMNGETTKHVIVAANVIAVTET
Ga0302324_1008569752	3300031236	Palsa	MSDNSVQKTYTITYADGKTVSAKAESVAWTENGEFILLMVGEDTKHVIVAANVIAVTEQS
Ga0302324_1012763232	3300031236	Palsa	MADKTEKTYTITYAEGKTVFAKAESIAWTESGEFILLMVGEDTKHVIVAANVIAVTES
Ga0302324_1020829932	3300031236	Palsa	MAETSELKTYTITSADGKTISAKAESIAWTENGEFILLMDGENTKHVIVAENVIA
Ga0302324_1025020782	3300031236	Palsa	MAEETTAAAPQKTYLINYADGKYLEASAESIAWTENGEFILLMDGEATKHVVVAANVIAVTER
Ga0302187_100823683	3300031259	Bog	DTTEKTYTITYGETGKTLVAQAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Ga0302320_103564182	3300031524	Bog	MADTTEKTYTITYGETGKTLVAQAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ
Ga0302320_108050321	3300031524	Bog	MSDNTQKNYIITYAEGKTVSAQAESIAWTENGEFILLMNGEDTKHIIVAANVIAVTEQ
Ga0302320_113924852	3300031524	Bog	MADTTEKTYTITYAEGKTVTATAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ
Ga0302320_118670982	3300031524	Bog	MSDNSVQKSYTITYAEGKTVSAKAESIAWTENGEFILLMNGEETKHVIVAANVIAVTEQ
Ga0302326_114772022	3300031525	Palsa	MSDNSGQKTYKIVYADKSITAEAESIAWTENGEFILLMVGEDTKHVIVAANVIAVTEQ
Ga0302326_120041722	3300031525	Palsa	PKGTLADETTEAAPQKTYVINYADGKTIQASAESIAWTENGEFILLMDGETTKHVIVAANVVAVTEK
Ga0302326_122609882	3300031525	Palsa	MADTSEQKTYIINYADGKSISASAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEK
Ga0302326_128493911	3300031525	Palsa	MATEVPKEKTYSIVTKDKSYTAKAGSIAWTENGLFILLMNGEDTKHVIVSANVIAVVEN
Ga0310686_1026151491	3300031708	Soil	TYTITSTDGKSFTATAESIAWTENGEFILLMVGEETKHVIVAANVVAVTEK
Ga0310686_1089495061	3300031708	Soil	MAEETTTAAPQKTYIINYADGKTIQASAESIAWTENGEFILLMDGETTKHVIVAANVIAVTEK
Ga0302319_102276352	3300031788	Bog	MADTTEKTYTITYGETGKTLVAQAESIAWTENGEFILLMNGEDTKHVIVAANV
Ga0302319_103070873	3300031788	Bog	EKTYTITYGETGKTLVAQAESIAWTENGEFILLMNGEDTKHVIVAANVIAVTES
Ga0316053_1202071	3300032120	Soil	RQKGIQKMSDNTEQKTYTITYAEGKTISAKAESIAWTENGEFILLMDGENTKHVIVAANVIAVTEQ
Ga0316228_12174002	3300032579	Freshwater	GIQKMSEATGQKTYTITYAEGKTVFAKAESIAWTENGEFILLMDGETTKHVIVAANVIAVTEQS
Ga0316232_11057343	3300032605	Freshwater	MSEATGQKTYTITYAEGKTVFAKAESIAWTENGEFILLMDGETTKHVIVAANVIAVTEQS
Ga0326728_105987872	3300033402	Peat Soil	MSEETTEQKAVQKTFKVTCTDKTLTAHAESLAWTENGEFILLMDGDDVKHVIVAANVIAVTTEQT
Ga0334792_033302_1053_1235	3300033888	Soil	MSEETTEQKTFNIVYGDKTLTAKAESLAWTENGEFILLMDGEDAKHVIVAANVIAVTEQQ
Ga0370514_037621_922_1098	3300034199	Untreated Peat Soil	MSDNTEKTYTITYADGKTVSAKAESIAWTENGEFILLMVGEETKHVIVAANVIAVTEQ
Ga0370492_0389349_1_180	3300034282	Untreated Peat Soil	MAETSEQKNYTITYAEGKTVSAKAESIAWTENGEFILLMDGEETKHVIVAANVIAVVQD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066381

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences