Metagenome / Metatranscriptome Family F066329

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066329
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	50 residues
Representative Sequence	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTG
Number of Associated Samples	74
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.40 %
% of genes near scaffold ends (potentially truncated)	96.03 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (82.540 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.857 % of family members)
Environment Ontology (ENVO)	Unclassified (79.365 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 0.00% Coil/Unstructured: 64.71%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF06147	DUF968	3.17
PF13432	TPR_16	2.38
PF13431	TPR_17	2.38
PF03401	TctC	0.79
PF04392	ABC_sub_bind	0.79
PF01936	NYN	0.79
PF04542	Sigma70_r2	0.79
PF15919	HicB_lk_antitox	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.79
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.79
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.79
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.79
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
All Organisms	root	All Organisms	17.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
cellular organisms	root	All Organisms → cellular organisms	17.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.35 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.35 %
Sphingosinicellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae	0.79 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.35 %
Pedomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Pedomonas	0.79 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.35 %
Pedomonas mirosovicensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Pedomonas → Pedomonas mirosovicensis	0.79 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.54 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.35 %
Herbaspirillum sp. ST 5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. ST 5-3	0.79 %
Pedomonas mirosovicensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Pedomonas → Pedomonas mirosovicensis	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10065559	Not Available	1045	Open in IMG/M
3300004633\|Ga0066395_10360427	Not Available	810	Open in IMG/M
3300005181\|Ga0066678_10594736	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300005332\|Ga0066388_100424348	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300005332\|Ga0066388_104026175	Not Available	749	Open in IMG/M
3300005363\|Ga0008090_15327046	Not Available	764	Open in IMG/M
3300005764\|Ga0066903_101084439	Not Available	1474	Open in IMG/M
3300005764\|Ga0066903_107628086	Not Available	557	Open in IMG/M
3300005764\|Ga0066903_108367136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Pedomonas → Pedomonas mirosovicensis	528	Open in IMG/M
3300010358\|Ga0126370_10215834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1462	Open in IMG/M
3300010359\|Ga0126376_10666210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300010359\|Ga0126376_12252495	Not Available	590	Open in IMG/M
3300010360\|Ga0126372_12525205	Not Available	565	Open in IMG/M
3300010361\|Ga0126378_12611717	Not Available	577	Open in IMG/M
3300010376\|Ga0126381_102937163	Not Available	678	Open in IMG/M
3300010376\|Ga0126381_104633000	Not Available	530	Open in IMG/M
3300010398\|Ga0126383_10498851	Not Available	1275	Open in IMG/M
3300010398\|Ga0126383_13178228	Not Available	536	Open in IMG/M
3300012361\|Ga0137360_11875097	Not Available	505	Open in IMG/M
3300012971\|Ga0126369_11516978	Not Available	760	Open in IMG/M
3300012971\|Ga0126369_12286377	Not Available	627	Open in IMG/M
3300016270\|Ga0182036_10506194	Not Available	957	Open in IMG/M
3300016270\|Ga0182036_10513710	Not Available	950	Open in IMG/M
3300016270\|Ga0182036_11606577	Not Available	547	Open in IMG/M
3300016294\|Ga0182041_10554512	Not Available	1004	Open in IMG/M
3300016294\|Ga0182041_10956091	Not Available	773	Open in IMG/M
3300016294\|Ga0182041_11066179	Not Available	733	Open in IMG/M
3300016294\|Ga0182041_11887421	Not Available	555	Open in IMG/M
3300016319\|Ga0182033_10781808	Not Available	840	Open in IMG/M
3300016319\|Ga0182033_11016190	Not Available	738	Open in IMG/M
3300016319\|Ga0182033_11402778	Not Available	629	Open in IMG/M
3300016319\|Ga0182033_12007371	Not Available	527	Open in IMG/M
3300016319\|Ga0182033_12202290	Not Available	503	Open in IMG/M
3300016341\|Ga0182035_10806467	Not Available	824	Open in IMG/M
3300016341\|Ga0182035_11374358	Not Available	633	Open in IMG/M
3300016357\|Ga0182032_10548192	Not Available	956	Open in IMG/M
3300016357\|Ga0182032_10770510	Not Available	811	Open in IMG/M
3300016357\|Ga0182032_11132345	Not Available	672	Open in IMG/M
3300016357\|Ga0182032_11257713	Not Available	638	Open in IMG/M
3300016357\|Ga0182032_11416430	Not Available	602	Open in IMG/M
3300016357\|Ga0182032_12036871	Not Available	504	Open in IMG/M
3300016371\|Ga0182034_10548048	Not Available	970	Open in IMG/M
3300016404\|Ga0182037_10866046	Not Available	782	Open in IMG/M
3300016422\|Ga0182039_10170007	Not Available	1710	Open in IMG/M
3300016422\|Ga0182039_12006797	Not Available	532	Open in IMG/M
3300016445\|Ga0182038_11308667	Not Available	648	Open in IMG/M
3300021560\|Ga0126371_12569431	Not Available	617	Open in IMG/M
3300025922\|Ga0207646_11847979	Not Available	516	Open in IMG/M
3300026295\|Ga0209234_1306591	Not Available	510	Open in IMG/M
3300026298\|Ga0209236_1270876	Not Available	551	Open in IMG/M
3300027874\|Ga0209465_10098640	Not Available	1432	Open in IMG/M
3300031545\|Ga0318541_10033733	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300031546\|Ga0318538_10454158	Not Available	694	Open in IMG/M
3300031573\|Ga0310915_10120934	Not Available	1787	Open in IMG/M
3300031573\|Ga0310915_10968586	Not Available	594	Open in IMG/M
3300031573\|Ga0310915_10989031	Not Available	587	Open in IMG/M
3300031573\|Ga0310915_11085201	Not Available	556	Open in IMG/M
3300031573\|Ga0310915_11098685	Not Available	552	Open in IMG/M
3300031668\|Ga0318542_10169935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300031680\|Ga0318574_10303436	Not Available	928	Open in IMG/M
3300031681\|Ga0318572_10556020	Not Available	684	Open in IMG/M
3300031719\|Ga0306917_10305088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1230	Open in IMG/M
3300031719\|Ga0306917_10823840	Not Available	727	Open in IMG/M
3300031736\|Ga0318501_10114302	Not Available	1360	Open in IMG/M
3300031744\|Ga0306918_10765677	Not Available	754	Open in IMG/M
3300031744\|Ga0306918_11173112	Not Available	593	Open in IMG/M
3300031747\|Ga0318502_10126480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1440	Open in IMG/M
3300031763\|Ga0318537_10336164	Not Available	558	Open in IMG/M
3300031765\|Ga0318554_10181423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1198	Open in IMG/M
3300031768\|Ga0318509_10521095	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031768\|Ga0318509_10680649	Not Available	571	Open in IMG/M
3300031781\|Ga0318547_10643370	Not Available	658	Open in IMG/M
3300031794\|Ga0318503_10007259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2795	Open in IMG/M
3300031796\|Ga0318576_10173813	Not Available	1009	Open in IMG/M
3300031797\|Ga0318550_10338669	Not Available	729	Open in IMG/M
3300031798\|Ga0318523_10693477	Not Available	500	Open in IMG/M
3300031805\|Ga0318497_10078197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1749	Open in IMG/M
3300031805\|Ga0318497_10089012	Not Available	1645	Open in IMG/M
3300031821\|Ga0318567_10602269	Not Available	624	Open in IMG/M
3300031833\|Ga0310917_11072008	Not Available	538	Open in IMG/M
3300031846\|Ga0318512_10101453	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300031860\|Ga0318495_10536007	Not Available	509	Open in IMG/M
3300031879\|Ga0306919_10133998	Not Available	1788	Open in IMG/M
3300031879\|Ga0306919_10188770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1525	Open in IMG/M
3300031879\|Ga0306919_10662774	Not Available	804	Open in IMG/M
3300031879\|Ga0306919_10874215	Not Available	689	Open in IMG/M
3300031879\|Ga0306919_11076581	Not Available	613	Open in IMG/M
3300031890\|Ga0306925_10860912	Not Available	935	Open in IMG/M
3300031890\|Ga0306925_11002359	Not Available	851	Open in IMG/M
3300031890\|Ga0306925_11182670	Not Available	767	Open in IMG/M
3300031890\|Ga0306925_11259554	Not Available	737	Open in IMG/M
3300031890\|Ga0306925_11800532	Not Available	586	Open in IMG/M
3300031910\|Ga0306923_11079089	Not Available	866	Open in IMG/M
3300031912\|Ga0306921_12467268	Not Available	540	Open in IMG/M
3300031941\|Ga0310912_10116838	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300031941\|Ga0310912_10883672	Not Available	688	Open in IMG/M
3300031941\|Ga0310912_11517652	Not Available	504	Open in IMG/M
3300031942\|Ga0310916_10074949	Not Available	2658	Open in IMG/M
3300031942\|Ga0310916_10093923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2397	Open in IMG/M
3300031942\|Ga0310916_10249980	Not Available	1494	Open in IMG/M
3300031942\|Ga0310916_10920627	Not Available	732	Open in IMG/M
3300031945\|Ga0310913_10759788	Not Available	684	Open in IMG/M
3300031946\|Ga0310910_10989775	Not Available	657	Open in IMG/M
3300031947\|Ga0310909_11079055	Not Available	653	Open in IMG/M
3300031947\|Ga0310909_11325055	Not Available	578	Open in IMG/M
3300031947\|Ga0310909_11648457	Not Available	507	Open in IMG/M
3300031947\|Ga0310909_11687499	Not Available	500	Open in IMG/M
3300031954\|Ga0306926_11314212	Not Available	843	Open in IMG/M
3300032001\|Ga0306922_10379306	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300032001\|Ga0306922_12007624	Not Available	563	Open in IMG/M
3300032010\|Ga0318569_10085401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300032010\|Ga0318569_10522804	Not Available	553	Open in IMG/M
3300032025\|Ga0318507_10137539	Not Available	1039	Open in IMG/M
3300032044\|Ga0318558_10097047	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300032052\|Ga0318506_10443301	Not Available	576	Open in IMG/M
3300032055\|Ga0318575_10230787	Not Available	932	Open in IMG/M
3300032060\|Ga0318505_10303230	Not Available	754	Open in IMG/M
3300032064\|Ga0318510_10017131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2247	Open in IMG/M
3300032066\|Ga0318514_10511876	Not Available	639	Open in IMG/M
3300032068\|Ga0318553_10411237	Not Available	708	Open in IMG/M
3300032261\|Ga0306920_101845974	Not Available	851	Open in IMG/M
3300032261\|Ga0306920_102283039	Not Available	750	Open in IMG/M
3300033289\|Ga0310914_10077367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. ST 5-3	2815	Open in IMG/M
3300033289\|Ga0310914_10676388	Not Available	927	Open in IMG/M
3300033290\|Ga0318519_10569451	Not Available	686	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.65%
Loam	Environmental → Terrestrial → Soil → Loam	6.35%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100655591	3300002906	Grasslands Soil	MRGSTLATVLVAVFISYLGTPAAVKTGGYKTTDLVVNKSPLIDKNGISHT
Ga0066395_103604271	3300004633	Tropical Forest Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGTVDPNL
Ga0066678_105947361	3300005181	Soil	MRRSTLATALAAVFISYLGTPAAVKTGGYVETDLVVNKSPL
Ga0066388_1004243481	3300005332	Tropical Forest Soil	MRRSTLATALVAAFISYLGTPAAVKAGGYVEKDLVADVKPLTDKNGIVHNDKDTILDPH
Ga0066388_1040261751	3300005332	Tropical Forest Soil	MRCSTVATALVAVFISYLGAPAAVKAGGYVEKDLVADVKPLTDKNGIVHNDKDTILDPH
Ga0008090_153270461	3300005363	Tropical Rainforest Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTG
Ga0066903_1010844391	3300005764	Tropical Forest Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKV
Ga0066903_1076280862	3300005764	Tropical Forest Soil	VRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDPNLLNP
Ga0066903_1083671361	3300005764	Tropical Forest Soil	MRRPILATALVAVFISYLGTPAAVKTSGYVPTDLVVNKSPLIDKNGISHW*
Ga0126370_102158341	3300010358	Tropical Forest Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVD
Ga0126376_106662102	3300010359	Tropical Forest Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGI
Ga0126376_122524951	3300010359	Tropical Forest Soil	MRRSTLATALVAVFLSYLGTPAPVKAGGYDETDLVANKLKLTDKNGIVHNAKIQDPNL
Ga0126372_125252051	3300010360	Tropical Forest Soil	MRHSIVATALVAVFISYLGTPAPVKAGGYDETDLVADLKPLTDKNGIVHNAKV
Ga0126378_126117172	3300010361	Tropical Forest Soil	MRRSTVATALVAVFISYLGTPAEVQAGGYDETDLVADVSPLIDQNRIEHKAKIVDPNLKNSWGIAESTTS
Ga0126381_1029371632	3300010376	Tropical Forest Soil	ILATALVAVFISYLGTPAAVKTSGYVPTGLVVNKSPLIDKNGISHW*
Ga0126381_1046330001	3300010376	Tropical Forest Soil	MRRSTLATALVAVFMSYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISH
Ga0126383_104988512	3300010398	Tropical Forest Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYKPTDLVVNKSPLTDKNGIVHSS
Ga0126383_131782281	3300010398	Tropical Forest Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGTVDPNL
Ga0137360_118750971	3300012361	Vadose Zone Soil	MRGSTLATVLVAVFISYLGTPAAVKTGGYKTTDLVVNKSPLIDKNGISHTGMVDPNLLNPWG
Ga0126369_115169782	3300012971	Tropical Forest Soil	MRRSTVATALVAVFISYLGTPAAVKTGGYVATDLVVNKSPLI
Ga0126369_122863772	3300012971	Tropical Forest Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPL
Ga0182036_105061942	3300016270	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQVQDP
Ga0182036_105137101	3300016270	Soil	MRRSTLATALAAVFISYLATPAAVKTGGYVATDLVTNRSFTDKNGISHTGQLQDPNLLNP
Ga0182036_116065771	3300016270	Soil	MRRSTLATALVAVFISYLATPAAVKTGSYVRTDLVVNKSPLIDKNGISHTGQVQDPNLVN
Ga0182041_105545121	3300016294	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLLNP
Ga0182041_109560911	3300016294	Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGMVDPNLLNP
Ga0182041_110661792	3300016294	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYGRTDLVVNKSPLIDKN
Ga0182041_118874211	3300016294	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLLNP
Ga0182033_107818082	3300016319	Soil	MRRSTLATALVALFVASYFGTPAAVKTGGFVETDLIANKTPLTDKNG
Ga0182033_110161902	3300016319	Soil	MRRSILATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQ
Ga0182033_114027781	3300016319	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYKPTDLVVNKSP
Ga0182033_120073711	3300016319	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDA
Ga0182033_122022901	3300016319	Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLID
Ga0182035_108064671	3300016341	Soil	MRRSALATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQLQDAN
Ga0182035_113743581	3300016341	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQVQ
Ga0182032_105481923	3300016357	Soil	MRRSTLATVLLAVFISYLATPAAVKTGGYKPTDLVVN
Ga0182032_107705101	3300016357	Soil	MRRSALATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTG
Ga0182032_111323452	3300016357	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKN
Ga0182032_112577131	3300016357	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQD
Ga0182032_114164301	3300016357	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHT
Ga0182032_120368711	3300016357	Soil	MRSATLATSALAVVLVATYLVTNPAAKQGGYVETDLVVNKPPLTDKNGISHTGT
Ga0182034_105480482	3300016371	Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISH
Ga0182037_108660461	3300016404	Soil	MRRSALATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFTDKNGI
Ga0182039_101700071	3300016422	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYTETDLVVNK
Ga0182039_120067971	3300016422	Soil	MRSATLAMSALAAVLVATYLVTNPAAKQGGYVETDLVVNKSPLTDKNGISHTG
Ga0182038_113086671	3300016445	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYKATDLVVNKSPLIDKNGISHTGTVDPNL
Ga0126371_125694312	3300021560	Tropical Forest Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVVNKS
Ga0207646_118479791	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSTLATVLVAVFVSYLGTPAAVRTKTGGFVETDLVVNKSPLTDKNGHVHMVPSTQVDP
Ga0209234_13065912	3300026295	Grasslands Soil	MRRSTLATALAAVFISYLGTPAAVKTGGYVETDLVVNKSPLTDK
Ga0209236_12708762	3300026298	Grasslands Soil	MRRSTLATALAAVFISYLGTPAAVKTGGYVETDLVVNKSPLTDKNGIV
Ga0209465_100986403	3300027874	Tropical Forest Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVATDLVTNKSFTDKNGIAHTGQVQDPNLLNP
Ga0318541_100337332	3300031545	Soil	MRRSILATALVAVFIPYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGNFPHW
Ga0318538_104541582	3300031546	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQVQDPNLQN
Ga0310915_101209341	3300031573	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLLNPWG
Ga0310915_109685861	3300031573	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPH
Ga0310915_109890311	3300031573	Soil	MRRSTLATALVALFAASYLGTPAAVKTGGFVETDLVVNKSPLTDKN
Ga0310915_110852011	3300031573	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLLNPWG
Ga0310915_110986851	3300031573	Soil	MRRSALATALVAVFISYLGTPAAVKTGGYVPTDLVV
Ga0318542_101699352	3300031668	Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKV
Ga0318574_103034361	3300031680	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVRTDLVVNKSPLTDKNGISHPGQVQD
Ga0318572_105560201	3300031681	Soil	MRRSALATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPL
Ga0306917_103050881	3300031719	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVT
Ga0306917_108238401	3300031719	Soil	MRRSTLATALVAVFISYLGTPAAVKAGGYVPTDLVTNRSFTDKNGIPHTGQVQDPNLQNP
Ga0318501_101143021	3300031736	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYGRTDLVVNKSPLIDKNGISHTGTVDPNLRNP
Ga0306918_107656772	3300031744	Soil	MRRSALATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFTD
Ga0306918_111731121	3300031744	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYKATDLVVNKSPLIDKNGI
Ga0318502_101264801	3300031747	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDPN
Ga0318537_103361641	3300031763	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQ
Ga0318554_101814232	3300031765	Soil	MRRSILATALVAVFIPYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVD
Ga0318509_105210951	3300031768	Soil	MRRSTLATALAAVFISYLGTPAAVKTGGYVPTDLVTNRSF
Ga0318509_106806491	3300031768	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLLN
Ga0318547_106433702	3300031781	Soil	MRRSTLATALVAVLLSYLGTPAPVKAGGYDETDLVANKLKLTDKNGIVHNAQVKDPN
Ga0318503_100072591	3300031794	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDL
Ga0318576_101738132	3300031796	Soil	MHRSTLATALAAVFISYLATPAAVKTGGYVATDLVTNRSFTDKNGISHT
Ga0318550_103386691	3300031797	Soil	MRRSILATALVAVFIPYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDPNLLN
Ga0318523_106934771	3300031798	Soil	MRRSTLATALVAVFLSYLGTPAPVKAGGYDETDLVANKLKLTDKNGIVHNADVIDQNLKN
Ga0318497_100781972	3300031805	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDK
Ga0318497_100890122	3300031805	Soil	MRRSTLATALVAVFMSYLGTPAAVKTGGYVPTDLVVNKSPLIDKN
Ga0318567_106022691	3300031821	Soil	MRRSTLATALVAVLLSYLGTPAPVKAGGYDETDLVANKLKLTDKNGIVHN
Ga0310917_110720081	3300031833	Soil	MRRSTLATALVAVFMSYLGTPAAVKTGGYVATDLVTNRSFTDKNG
Ga0318512_101014531	3300031846	Soil	LATALVAVFIPYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGNFPHW
Ga0318495_105360071	3300031860	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGK
Ga0306919_101339981	3300031879	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNG
Ga0306919_101887701	3300031879	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISH
Ga0306919_106627742	3300031879	Soil	MRRSILATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFT
Ga0306919_108742151	3300031879	Soil	MRRSTLATALVAVFMSYLGTPAAVKTGGYVPTDLVVNKSPLIDK
Ga0306919_110765811	3300031879	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYKATDLVVNKSPLIDKNG
Ga0306925_108609121	3300031890	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANL
Ga0306925_110023591	3300031890	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQVQDPNL
Ga0306925_111826701	3300031890	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYKATDLVVNKSP
Ga0306925_112595542	3300031890	Soil	MRRSTLATALVAVFISYLATPAAVKTGSYVRTDLVVNKSPL
Ga0306925_118005321	3300031890	Soil	MRRSTLATALVAVFVSYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDAN
Ga0306923_110790891	3300031910	Soil	MRRSALATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKV
Ga0306921_124672681	3300031912	Soil	MRRSALATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDP
Ga0310912_101168382	3300031941	Soil	MRRSILATALVAVFIPYLGTPAAVKPGGYVPTDLVVNKSPLIDKNGNFPHW
Ga0310912_108836721	3300031941	Soil	MRRSTLATALVALFAASYLGTPAAVKTGGFVETDLVVNK
Ga0310912_110108952	3300031941	Soil	MRRSTLATALVAVFLSYLGTPAPVKAGGYDETDLVANKLKLTDKNGIVHNADVIDQNLKNPWGL
Ga0310912_115176522	3300031941	Soil	MRRSTLATALVAVFLTYLATPAAVKTGGYFRTDLVVNKSPLIDQNG
Ga0310916_100749491	3300031942	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLLN
Ga0310916_100939232	3300031942	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDP
Ga0310916_102499801	3300031942	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYGRTDLVVNK
Ga0310916_109206271	3300031942	Soil	MRRSALATALVAVFMSYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIP
Ga0310913_107597881	3300031945	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQVQD
Ga0310910_109897751	3300031946	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYGRTDLVVNKSPL
Ga0310909_110790551	3300031947	Soil	MRHSIVATALVAVFLSYLGTPAPAKAAGYDETDLVADKKPLTDKNGIVH
Ga0310909_113250551	3300031947	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYKATDLVVNKSPLIDKNGISHT
Ga0310909_116484571	3300031947	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIPHTG
Ga0310909_116874991	3300031947	Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDPNL
Ga0306926_113142121	3300031954	Soil	MRRSALATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTG
Ga0306922_103793061	3300032001	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQIQDANLL
Ga0306922_120076241	3300032001	Soil	MRRSTLATALVALFVASYFGTPAAVKTGGFVETDLIANKTPLT
Ga0318569_100854011	3300032010	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDPNLLNP
Ga0318569_105228041	3300032010	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHTGQ
Ga0318507_101375391	3300032025	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVPTDLVTNRSFTDKNGIPHT
Ga0318558_100970471	3300032044	Soil	MRRSTLATALVAVFMSYLGTPAAVKTGGYVATDLVTNRSFTD
Ga0318506_104433011	3300032052	Soil	MRRSTLATALVALFVASYFGTPAAVKTGGFVETDLIANKTPLTDKNGHVHMVPA
Ga0318575_102307872	3300032055	Soil	MRRSILATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGNFPHW
Ga0318505_103032301	3300032060	Soil	MRRSALATALVAVFMSYLGTPAAVKTGGYVPTDLVTN
Ga0318510_100171311	3300032064	Soil	MRRSILATALVAVVISYLGTPAAVKTGGYVPTDLVVNKSPLIDKNGISHTGKVDLNLLT
Ga0318514_105118762	3300032066	Soil	MRRSTLATALVAVLLSYLGTPAPVKAGGYDETDLVANKLKLTDKNGIVHNAQVK
Ga0318553_104112371	3300032068	Soil	MRRSILATALVAVVISYLGTPAEVKTGGYVPTDLVVNKSPLIDK
Ga0306920_1018459741	3300032261	Soil	MRRSALATALVAVFISYLGTPAAVKTGGYVPTDLVVNKSPLID
Ga0306920_1022830391	3300032261	Soil	MRRSALATVLLVVFISYLATPAAVKTGGYIETDLVVNKSPLTDKNGIAHTGTVDP
Ga0310914_100773672	3300033289	Soil	MRRSTLATALVAVFISYLGTPAAVKTGGYVPTDLVTNRSFTDKNGIP
Ga0310914_106763882	3300033289	Soil	MRRSTLATALVAVFMSYLGTPAAVKTGGYVATDLVTNRSFTDKNGISHTGQIQDQNLRNP
Ga0318519_105694511	3300033290	Soil	MRRSTLATALVAVFISYLATPAAVKTGGYVRTDRVVNKSPLIDKNGISHTGQVQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066329

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences