NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F066309

Metagenome Family F066309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066309
Family Type Metagenome
Number of Sequences 126
Average Sequence Length 39 residues
Representative Sequence DRIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL
Number of Associated Samples 55
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 30.70 %
% of genes near scaffold ends (potentially truncated) 76.98 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.333 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(93.651 % of family members)
Environment Ontology (ENVO) Unclassified
(99.206 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(93.651 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.36%    β-sheet: 0.00%    Coil/Unstructured: 63.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF04827Plant_tran 0.80
PF05970PIF1 0.80
PF00067p450 0.80
PF16486ArgoN 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0507ATPase/5’-3’ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 0.80
COG2124Cytochrome P450Defense mechanisms [V] 0.80


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.33 %
All OrganismsrootAll Organisms16.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300014486|Ga0182004_10006967All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor9217Open in IMG/M
3300014486|Ga0182004_10007685All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Pooideae → Triticodae → Triticeae → Triticinae → Aegilops → Aegilops tauschii → Aegilops tauschii subsp. strangulata8771Open in IMG/M
3300014486|Ga0182004_10021826All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta4768Open in IMG/M
3300014486|Ga0182004_10025409All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae4268Open in IMG/M
3300015265|Ga0182005_1226973Not Available570Open in IMG/M
3300015267|Ga0182122_1016049Not Available757Open in IMG/M
3300015268|Ga0182154_1030270Not Available645Open in IMG/M
3300015268|Ga0182154_1040977Not Available595Open in IMG/M
3300015268|Ga0182154_1052552Not Available554Open in IMG/M
3300015269|Ga0182113_1001469Not Available1676Open in IMG/M
3300015275|Ga0182172_1033660Not Available638Open in IMG/M
3300015277|Ga0182128_1051498Not Available572Open in IMG/M
3300015277|Ga0182128_1069240All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria → Setaria italica524Open in IMG/M
3300015281|Ga0182160_1041292Not Available618Open in IMG/M
3300015283|Ga0182156_1040687Not Available631Open in IMG/M
3300015285|Ga0182186_1008197Not Available972Open in IMG/M
3300015285|Ga0182186_1028378Not Available686Open in IMG/M
3300015285|Ga0182186_1074687Not Available520Open in IMG/M
3300015287|Ga0182171_1066685Not Available548Open in IMG/M
3300015287|Ga0182171_1076382All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria → Setaria italica526Open in IMG/M
3300015287|Ga0182171_1080661Not Available517Open in IMG/M
3300015288|Ga0182173_1013004All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae850Open in IMG/M
3300015291|Ga0182125_1063234Not Available568Open in IMG/M
3300015291|Ga0182125_1080273Not Available529Open in IMG/M
3300015294|Ga0182126_1036326Not Available670Open in IMG/M
3300015294|Ga0182126_1044467Not Available632Open in IMG/M
3300015294|Ga0182126_1087351Not Available518Open in IMG/M
3300015295|Ga0182175_1009770Not Available973Open in IMG/M
3300015299|Ga0182107_1042358Not Available661Open in IMG/M
3300015302|Ga0182143_1037300Not Available684Open in IMG/M
3300015303|Ga0182123_1005538Not Available1110Open in IMG/M
3300015303|Ga0182123_1045923Not Available628Open in IMG/M
3300015303|Ga0182123_1056484Not Available593Open in IMG/M
3300015303|Ga0182123_1064536All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Zingiberales → Musaceae → Ensete → Ensete ventricosum571Open in IMG/M
3300015304|Ga0182112_1021069All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor805Open in IMG/M
3300015304|Ga0182112_1055332Not Available612Open in IMG/M
3300015305|Ga0182158_1014130Not Available893Open in IMG/M
3300015307|Ga0182144_1012617Not Available939Open in IMG/M
3300015307|Ga0182144_1110020Not Available500Open in IMG/M
3300015323|Ga0182129_1001827All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius1617Open in IMG/M
3300015323|Ga0182129_1094819Not Available535Open in IMG/M
3300015323|Ga0182129_1106007Not Available517Open in IMG/M
3300015341|Ga0182187_1149969Not Available559Open in IMG/M
3300015342|Ga0182109_1047695Not Available884Open in IMG/M
3300015343|Ga0182155_1018934Not Available1165Open in IMG/M
3300015343|Ga0182155_1019907All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae1148Open in IMG/M
3300015343|Ga0182155_1116741Not Available641Open in IMG/M
3300015343|Ga0182155_1130677Not Available615Open in IMG/M
3300015344|Ga0182189_1027422Not Available1065Open in IMG/M
3300015344|Ga0182189_1146406Not Available597Open in IMG/M
3300015345|Ga0182111_1058026Not Available862Open in IMG/M
3300015345|Ga0182111_1128629Not Available645Open in IMG/M
3300015346|Ga0182139_1028629Not Available1099Open in IMG/M
3300015346|Ga0182139_1047797Not Available924Open in IMG/M
3300015346|Ga0182139_1049929Not Available911Open in IMG/M
3300015347|Ga0182177_1118892Not Available667Open in IMG/M
3300015347|Ga0182177_1232238Not Available516Open in IMG/M
3300015351|Ga0182161_1000290All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae3943Open in IMG/M
3300015351|Ga0182161_1028464Not Available1168Open in IMG/M
3300015351|Ga0182161_1056741All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta917Open in IMG/M
3300015351|Ga0182161_1069285Not Available851Open in IMG/M
3300015351|Ga0182161_1081691Not Available800Open in IMG/M
3300015351|Ga0182161_1085747Not Available785Open in IMG/M
3300015351|Ga0182161_1175373Not Available596Open in IMG/M
3300015351|Ga0182161_1230061Not Available534Open in IMG/M
3300015351|Ga0182161_1255820Not Available511Open in IMG/M
3300015355|Ga0182159_1003055All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae2706Open in IMG/M
3300015355|Ga0182159_1147551Not Available731Open in IMG/M
3300015355|Ga0182159_1187995Not Available660Open in IMG/M
3300015355|Ga0182159_1347225Not Available505Open in IMG/M
3300015361|Ga0182145_1038400Not Available857Open in IMG/M
3300015361|Ga0182145_1140732Not Available561Open in IMG/M
3300015361|Ga0182145_1182121Not Available514Open in IMG/M
3300017404|Ga0182203_1005017All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1420Open in IMG/M
3300017404|Ga0182203_1043884Not Available766Open in IMG/M
3300017404|Ga0182203_1069117All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor666Open in IMG/M
3300017407|Ga0182220_1005242Not Available1134Open in IMG/M
3300017407|Ga0182220_1077561Not Available554Open in IMG/M
3300017410|Ga0182207_1003944Not Available1592Open in IMG/M
3300017410|Ga0182207_1070524All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor684Open in IMG/M
3300017410|Ga0182207_1070919All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta682Open in IMG/M
3300017410|Ga0182207_1121289Not Available572Open in IMG/M
3300017410|Ga0182207_1140168Not Available544Open in IMG/M
3300017410|Ga0182207_1150462Not Available531Open in IMG/M
3300017411|Ga0182208_1013636Not Available984Open in IMG/M
3300017411|Ga0182208_1065751Not Available622Open in IMG/M
3300017413|Ga0182222_1029359All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta705Open in IMG/M
3300017420|Ga0182228_1104734Not Available543Open in IMG/M
3300017424|Ga0182219_1099493Not Available561Open in IMG/M
3300017425|Ga0182224_1058327Not Available700Open in IMG/M
3300017427|Ga0182190_1003050Not Available1798Open in IMG/M
3300017427|Ga0182190_1091373Not Available617Open in IMG/M
3300017427|Ga0182190_1105225Not Available587Open in IMG/M
3300017427|Ga0182190_1134474Not Available540Open in IMG/M
3300017430|Ga0182192_1070246Not Available687Open in IMG/M
3300017436|Ga0182209_1048037All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa757Open in IMG/M
3300017436|Ga0182209_1119388Not Available569Open in IMG/M
3300017436|Ga0182209_1119388Not Available569Open in IMG/M
3300017438|Ga0182191_1038394Not Available841Open in IMG/M
3300017442|Ga0182221_1010219Not Available1172Open in IMG/M
3300017442|Ga0182221_1060421Not Available693Open in IMG/M
3300017442|Ga0182221_1168083Not Available504Open in IMG/M
3300017443|Ga0182193_1081307Not Available681Open in IMG/M
3300017443|Ga0182193_1140022Not Available567Open in IMG/M
3300017443|Ga0182193_1165814Not Available534Open in IMG/M
3300017683|Ga0182218_1018396All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae946Open in IMG/M
3300017683|Ga0182218_1110034Not Available558Open in IMG/M
3300017684|Ga0182225_1044652Not Available723Open in IMG/M
3300017684|Ga0182225_1126368Not Available524Open in IMG/M
3300017685|Ga0182227_1048411Not Available753Open in IMG/M
3300017685|Ga0182227_1055654Not Available710Open in IMG/M
3300017686|Ga0182205_1108718Not Available587Open in IMG/M
3300017690|Ga0182223_1013115Not Available924Open in IMG/M
3300026118|Ga0207675_100887343Not Available908Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere93.65%
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root4.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015285Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015287Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182004_1000696733300014486RootMLDNIRLDVDIINIQFKYSDVNTVSDVGYSDSDTDRSKPL*
Ga0182004_1000768563300014486RootMPNRTRLDIDIINMLFEYSNMDTVSDVVYLNLDMDGSKPL*
Ga0182004_1001870113300014486RootMSTILDMIQLDIDIINIRFEYINTNTTSDVEYPDSDMIGFEHF*
Ga0182004_1002182623300014486RootMSDKIELNINIINIRFKYSDTDTVSYVEYSDSDTDIYKSL*
Ga0182004_1002540963300014486RootRLDVDIINIRFKYSDTDTVSDVGYSDSDTDRFEPL*
Ga0182004_1005348913300014486RootMAINIRDENGSHRIRLDVDIIYIRFKNLDMDTVSDVGYSDLDTDRSEPL*
Ga0182005_122697313300015265Rhizosphere*LDVDITNI*FKYSNMNTVSDVEYSDSDTDRSKPF*
Ga0182122_101604913300015267Miscanthus PhyllosphereMGLAMPDRIRLDVDIINM*FEYSDTDTVSDVEYPDSDTD
Ga0182154_103027013300015268Miscanthus PhyllosphereDRVRLNIDIINIRLKYLDMDTVSDIEYLDSDTDRSEPF*
Ga0182154_104097713300015268Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQLL*
Ga0182154_105255213300015268Miscanthus PhyllosphereMTDRIGLDIDIINMRFDYSDTDTVSDVEYPDSDTDRFELL*
Ga0182113_100146913300015269Miscanthus PhyllosphereMGLAMPDRIRLDVDIINMRFEYLDTDTVSDVEYPDS
Ga0182172_103366013300015275Miscanthus PhyllosphereDMIRLDIDIINMRFEFSNTDMVPDVEYPDSDMDRSQPL*
Ga0182128_105149813300015277Miscanthus PhyllosphereIRLDIDVINMRFEYSDTDTVSDVGYPDSDTDRSQPL*
Ga0182128_106924013300015277Miscanthus PhyllosphereRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPF*
Ga0182160_104129213300015281Miscanthus PhyllosphereMSDRIRLDIDIINMRFEYSHMDTVSDVGYPDSDTDRSQP
Ga0182156_104068713300015283Miscanthus PhyllosphereMLDRI*LDIDIINMQFEYSDMDTVSDVGYPDSDTDRSQPL
Ga0182186_100819713300015285Miscanthus PhyllosphereMPDMIRLDIDIINMRFEYSDTDSISDVGYPDSDTDRSQP
Ga0182186_102837823300015285Miscanthus PhyllosphereLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL*
Ga0182186_107468713300015285Miscanthus PhyllosphereVSAMSDRIRLDIDIINMRFEDSDMNTVLDVEYVNSDADGSEPL*
Ga0182171_106668513300015287Miscanthus PhyllosphereRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL*
Ga0182171_107638213300015287Miscanthus PhyllosphereTMSDMIRLDIDIINMRFEYLDTDTVSDVGYPNLNMDRSQPF*
Ga0182171_108066113300015287Miscanthus PhyllosphereMPDRIRLDIDIINMRFEYTDMDIVSDVEYPDSDMSR
Ga0182173_101300413300015288Miscanthus PhyllosphereMSDMIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQP
Ga0182125_106323413300015291Miscanthus PhyllosphereDRIRLDVDIINVIIGYGFEYSDMDTVSDVGYLDSDTDRSQPL*
Ga0182125_108027313300015291Miscanthus PhyllosphereMSAIPDRIRFDVDIINMRFEFLDTDTVSNVEYPDSDTVRSQPQ*
Ga0182126_103632623300015294Miscanthus PhyllosphereMSDMIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDISQPL*
Ga0182126_104446723300015294Miscanthus PhyllosphereVSTMPYMIRLDIDIVNIRFDYSDTDTVSDVEYLDSGTDKSELL*
Ga0182126_108735113300015294Miscanthus PhyllosphereMSDRIRLYIDIINIRFEYSDTDTVSDVGYPDSDTDRSQ
Ga0182175_100977023300015295Miscanthus PhyllosphereLDVDIINMRFEYSDTDTVSDVEYADSDTDRSEPL*
Ga0182157_102557123300015296Miscanthus PhyllosphereI*LDIDIINMRFDYSDTVSDVEYPDSDTDIFELL*
Ga0182106_110136413300015298Miscanthus PhyllosphereMLDRIRLDIDIINMLFEYSDTDKVSDVEYPDSDTDISKPL*
Ga0182107_104235813300015299Miscanthus PhyllosphereMGLAMPDRIRLDVDIINMRFDYLDTDTVSDVEYLDSDTDRSEHL*
Ga0182143_103730013300015302Miscanthus PhyllosphereTHRIQLDINIINMRFEYSDTDTVSDVEYPDSNMNRSEPL*
Ga0182123_100553833300015303Miscanthus PhyllosphereVSTMSDRIRFGIDIINMRFEYSDTDTVLDIEYLDSDMDIS*
Ga0182123_104592313300015303Miscanthus PhyllosphereAMPDRIRLGIDIINMRFEYSDTDTVSDVEYPDSDTDRFEPL*
Ga0182123_105648413300015303Miscanthus PhyllosphereTMPDRIRLDIDIINMLFEYSDTDKVSDVEYPDSDMDRSEPL*
Ga0182123_106453623300015303Miscanthus PhyllosphereRIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQLL*
Ga0182112_102106913300015304Miscanthus PhyllosphereMSDRIRLDIDIINMRFEYSDTDTDTVSDVGYPDSD
Ga0182112_105533213300015304Miscanthus PhyllosphereMPDRIRLDIDIINM*FKYLDTDTMSDVEYPDSDMDRSEPL
Ga0182158_101413013300015305Miscanthus PhyllosphereSDRIRLDINIINMRFEYSDTDTVLDVGYPDSDTDISQPL*
Ga0182144_101261713300015307Miscanthus PhyllosphereMSDMIRLDINIINIRFEYSDTDTVSDVGYPDSDTN
Ga0182144_111002013300015307Miscanthus PhyllosphereMGLAMPDRIRLDVDIINMRFDYLDTDTVSDVEYLDSDTD
Ga0182140_111157613300015314Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDIEYPDSDTDGSKHL*
Ga0182129_100182733300015323Miscanthus PhyllosphereMPDRIRLDFNIINMRFEYSDMDTVLDVEYPDSDTDRSEPL
Ga0182129_109481913300015323Miscanthus PhyllosphereDRIRLGIDIINIRFEYLDTDTVSDVEYLDSDTDRFEPL*
Ga0182129_110600713300015323Miscanthus PhyllosphereMSDMIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDR
Ga0182187_114996913300015341Miscanthus PhyllosphereMSDRIRLDIDIINMRFEYSDMDTVLDIGYPDSNTNRSQLL*
Ga0182109_104769513300015342Miscanthus PhyllosphereMPDRIRLDVDIINMRFEYLDTDTVSDVEYPDSDTDRSEPL*
Ga0182155_101893423300015343Miscanthus PhyllosphereRIVSTMSDRIRLNIDIINMRFEYLDTDTVSDVRYSDSDTDRSQLL*
Ga0182155_101990713300015343Miscanthus PhyllosphereMSAMSDRIRLGIDIISIQFEYSDMDTVSDVEYSDSDTDIF
Ga0182155_111674133300015343Miscanthus PhyllosphereVDIVNMRFEYSDTDTDTDIVSNVEYPNSDTNRSKPL*
Ga0182155_113067713300015343Miscanthus PhyllosphereMPDRIRLDIDIINM*FEYSDTDTVLDVEYLDSDTD
Ga0182189_102742213300015344Miscanthus PhyllosphereDRIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDIFQPL*
Ga0182189_114640613300015344Miscanthus PhyllosphereMWLVSTMPDMIRFDIDIINMRLEYSDTDTDTVSDIEYPDSDMDRYQPL*
Ga0182111_105802623300015345Miscanthus PhyllosphereRIRFDVDIINMRFEFSDTDTVSNVEYPDSDTDRSKPL*
Ga0182111_112862923300015345Miscanthus PhyllosphereLDVDIINMRFKYSDTDTVSAIEYPDSDMDRSELL*
Ga0182111_114931513300015345Miscanthus PhyllosphereILLGIDITNMRFEYSNTDTISDVKYPDSDTNRSEPL*
Ga0182139_102862923300015346Miscanthus PhyllosphereSDRIRLDIDIINMRFEYSDTDTVSDVGYPDLDTDRSQPL*
Ga0182139_104779713300015346Miscanthus PhyllosphereDRIRLDIDIINIQFEYSDTDTVSDIGYPDSDTDRSQPL*
Ga0182139_104992923300015346Miscanthus PhyllosphereMPDRIRLGIDIINIRFEYSDMDTVLDVEYLDSDTDRFEPL
Ga0182177_107965213300015347Miscanthus PhyllosphereLNIDIINIQFKYSNTNMVSDIEYPDSDTDISKPL*
Ga0182177_111889223300015347Miscanthus PhyllosphereLDIDIINMRFEYSDTDTVSDVRYPDSDMDRSQPL*
Ga0182177_123223813300015347Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDVGYLDSNTNRSQPL*
Ga0182161_100029013300015351Miscanthus PhyllosphereIRVDINIINTRFKYSDMDTISDVEYPDSNTNRFESL*
Ga0182161_102846423300015351Miscanthus PhyllosphereDMIRLDIGIINIRFEYLDTDTVSDVGYPDSDTDRSQSL*
Ga0182161_105674123300015351Miscanthus PhyllosphereDRIQLDIDIINMRFEYSDMDTVSDVEYPDSNTDGSKPL*
Ga0182161_106928513300015351Miscanthus PhyllosphereLDIDIINMRFEYSDTDTVSDVGYLDLDTDRSQLL*
Ga0182161_108169113300015351Miscanthus PhyllosphereTMSDRIRLDIDIINMRLEYSDTDMVSNIGYPDSDMDRSQPL*
Ga0182161_108574713300015351Miscanthus PhyllosphereMSDMIRLDIDIINMRFEYSDTDTDTVSDVEYPDSDTDIFKPL*
Ga0182161_117537313300015351Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSKPL*
Ga0182161_123006113300015351Miscanthus PhyllosphereAIPDMIRLDIDIINMQFEYSDTDMILDVGYPDSDTGRS*
Ga0182161_125582013300015351Miscanthus PhyllosphereSTMSDMIRLDIDIISMQFEYSDTDTVSDVGYPDLDTDRSQPL*
Ga0182159_100305513300015355Miscanthus PhyllosphereMTDTIRLDIDIVNMRFDYSDTDTVSDVEYPDSDTDIFELL*
Ga0182159_103053713300015355Miscanthus PhyllosphereMSNRIRLDIYISIMRFKYSDTDTVSDIKYLDSDTDKSE
Ga0182159_105739113300015355Miscanthus PhyllosphereRLDIDIINMRFEYSDTDTVSDVEYPDSDTDISELL*
Ga0182159_114755113300015355Miscanthus PhyllosphereIRLDIDIINMRFEYSDMDTVSDVEYPDSDTDRSQPL*
Ga0182159_118799513300015355Miscanthus PhyllosphereMSDRIRLDIDIINMRFEYSDTDTVSDVGYPDLDTDR
Ga0182159_134722513300015355Miscanthus PhyllosphereGIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL*
Ga0182145_103840013300015361Miscanthus PhyllosphereDRIRLDINIINM*FEYSDTDTVSDIEYSDSDTDRSEPL*
Ga0182145_114073233300015361Miscanthus PhyllosphereSDMIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSKPL*
Ga0182145_115052013300015361Miscanthus PhyllosphereI*LDIDILNMQFEYSDTDMASDVEYPDSDTDIFGPF*
Ga0182145_118212113300015361Miscanthus PhyllosphereLDIDIINI*FEYSNTDTVSDVEYPDLDTDRSEPL*
Ga0182203_100501723300017404Miscanthus PhyllosphereMSDRIRLDINVMNMRFEYSDMDTVSDVEYPDSDTD
Ga0182203_104388413300017404Miscanthus PhyllosphereSTMSDRIRLDIDIINMRFEYSDMDTVSNVGYPDSDTDRSQSL
Ga0182203_106911723300017404Miscanthus PhyllosphereIRLDIDIINMRFEYLDTDTVSDVGYPDSDTDRSQLL
Ga0182220_100524213300017407Miscanthus PhyllosphereMLTVLDRILLDINIINMRFEYSDTDTVSDVEYPDSDTDKFKPL
Ga0182220_107756113300017407Miscanthus PhyllosphereRIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL
Ga0182207_100394413300017410Miscanthus PhyllosphereRLNIDIMNMRFEYSDTDMVSNVEYPDSDTDRSKPLRIRSQIRS
Ga0182207_107052413300017410Miscanthus PhyllosphereMSDRIRLDIDIMNMRFEYSDMDTVSDVEYPDSDTDRS
Ga0182207_107091923300017410Miscanthus PhyllosphereVSTMSDMIRLDIDIINMRFEYLDTDTVSDVGYPDSD
Ga0182207_112128913300017410Miscanthus PhyllosphereMGLAMPDRIRLDVDIINMRFEYLDTDTVSDVEYPDSDMNRSEHL
Ga0182207_114016813300017410Miscanthus PhyllosphereIRLDIDIINMRFEYSNTDTVSDVGYPDSDTDRSQPL
Ga0182207_115046213300017410Miscanthus PhyllosphereDRIRFDVDIINMRFQYSDTDTVLYVEYPDSDTDRSEPL
Ga0182208_101363623300017411Miscanthus PhyllosphereMSDRIRLDIDIISMRFEYSDMDMVSDVGYLDLDIDRSQPL
Ga0182208_106575113300017411Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL
Ga0182222_102935923300017413Miscanthus PhyllosphereMGLAMPDRIRLDVDFINMXFEYLDTDTVSDVEYPDSDTDRSEHL
Ga0182228_110473423300017420Miscanthus PhyllosphereSDMIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL
Ga0182219_109949313300017424Miscanthus PhyllosphereTMSNMIRLDIDIINMRFEYSDTDTVSDVRYPELDMDRSQQL
Ga0182224_105832713300017425Miscanthus PhyllosphereSDRIRLDIDIINMRFEYSDTDTVSDVGYLDSDTDRSQPL
Ga0182190_100305013300017427Miscanthus PhyllosphereRIRLDIDIINMRFEYSDTDTVSDVGYSDSDTDRSQLL
Ga0182190_109137313300017427Miscanthus PhyllosphereIVSTMSDRIRLDIDIINMRFEYSDMDTVSNVGYPDSDTDRSQSL
Ga0182190_110522513300017427Miscanthus PhyllosphereMPDRIRLDVDIINMRFDYLDTDTVSDVEYLDSDTDRSEHL
Ga0182190_113447413300017427Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDVRYPDSDTDRSQPL
Ga0182192_107024613300017430Miscanthus PhyllosphereTDRIRLDIDIINMRFDYSHTDTVSDVEYPDSDMDISEL
Ga0182209_104803713300017436Miscanthus PhyllosphereMSDMIRLDIDIINMQFEYSDTDTVSDVGYPDSDTDRSRPL
Ga0182209_111938813300017436Miscanthus PhyllosphereRMGLAMPDRIRLDVDIINMRFKYLDTDTVSDVEYPDSDMNRSEHL
Ga0182209_111938823300017436Miscanthus PhyllosphereMPDRIRLDVDIINMRFEYLDTDTVSDVEYPDSDMN
Ga0182191_103839423300017438Miscanthus PhyllosphereMSDRICVNINIINMRFEYSVIDTVSDVEYPDSDMDRSEPL
Ga0182191_108591413300017438Miscanthus PhyllosphereIRLDIDIINMRFDYSDTDTVSDIEYPDSDTDISELH
Ga0182221_101021913300017442Miscanthus PhyllosphereLDRIXLGIDIINMQFEYSDTVTVSDVEYPDSNTDGFEPL
Ga0182221_106042113300017442Miscanthus PhyllosphereSTMPDMIRLDIDIINMRFEYSDTDAVLDVGYPDSDTDRSQPL
Ga0182221_116808313300017442Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTVSDVEYPDSDTNRSKPL
Ga0182193_108130723300017443Miscanthus PhyllosphereSTMPDRIRLDISIINMRFEYSDTVSDVEYPDSDTGRSKPL
Ga0182193_110755513300017443Miscanthus PhyllosphereIRLDIDIINMRFEYSDTDTDTVSDVGYPDSDTDISQPL
Ga0182193_114002223300017443Miscanthus PhyllosphereDRIRLDIDIINMRFEYLDTDTVSDVGYPDSDTDRSQPL
Ga0182193_116581423300017443Miscanthus PhyllosphereMIRLDIDIINMRFEYSDTDTVPDVGYPDSDMDRSLPL
Ga0182218_101839613300017683Miscanthus PhyllosphereVSTMSDRIRLDIDSINMRFEYSDMDTISDVGYPNSDTDRSQPL
Ga0182218_111003413300017683Miscanthus PhyllosphereTMSDRIRLDIDIINMRFEYSDMDTVSDVGYPDSDTDRSQPL
Ga0182225_104465213300017684Miscanthus PhyllosphereMPDMIRLDIDIINMRFEYSDTDTVSDVEYLDSDKDESKPL
Ga0182225_112636813300017684Miscanthus PhyllosphereSTMSERLRFDINILNIRLEYSDTDTVSDVEYPDSDTDRFEPL
Ga0182227_104841113300017685Miscanthus PhyllosphereDRIRLDIDIINMRFEYSDTDTVSDVGYPDSDTDRSQPL
Ga0182227_105565423300017685Miscanthus PhyllosphereDRIRLDVDIINMRFEYSDTDTVSDVEYPDSDTDRSEPL
Ga0182205_110871813300017686Miscanthus PhyllosphereRLDIDIINIRFEYLDMDTVSNVEYPDSDTNRSKPI
Ga0182223_101311513300017690Miscanthus PhyllosphereMIRLDVDIINIRFNYLDMDTISDVENPDSDTNRSE
Ga0207675_10088734313300026118Switchgrass RhizosphereAMPDRIRLDVDIINMRFEYVDTDTVSDVEYPDSDTDRSEHL


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