Metagenome / Metatranscriptome Family F066281

Basic Information
Family ID	F066281
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	46 residues
Representative Sequence	MVERAAELARDSHARTRHAAVLVKDGSLLAWGTNGVPFPGEDH
Number of Associated Samples	115
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.61 %
% of genes near scaffold ends (potentially truncated)	99.21 %
% of genes from short scaffolds (< 2000 bps)	92.91 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (89.764 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.984 % of family members)
Environment Ontology (ENVO)	Unclassified (26.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.331 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.08% β-sheet: 25.35% Coil/Unstructured: 60.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00248	Aldo_ket_red	21.26
PF07883	Cupin_2	7.09
PF03992	ABM	5.51
PF01370	Epimerase	3.94
PF13601	HTH_34	2.36
PF03006	HlyIII	2.36
PF00561	Abhydrolase_1	1.57
PF13540	RCC1_2	1.57
PF08044	DUF1707	1.57
PF01636	APH	1.57
PF07859	Abhydrolase_3	1.57
PF02219	MTHFR	1.57
PF00857	Isochorismatase	0.79
PF07690	MFS_1	0.79
PF00202	Aminotran_3	0.79
PF07282	OrfB_Zn_ribbon	0.79
PF13450	NAD_binding_8	0.79
PF01904	DUF72	0.79
PF12679	ABC2_membrane_2	0.79
PF08031	BBE	0.79
PF03069	FmdA_AmdA	0.79
PF02634	FdhD-NarQ	0.79
PF00378	ECH_1	0.79
PF04072	LCM	0.79
PF00230	MIP	0.79
PF09985	Glucodextran_C	0.79
PF01184	Gpr1_Fun34_YaaH	0.79
PF03143	GTP_EFTU_D3	0.79
PF01641	SelR	0.79
PF12323	HTH_OrfB_IS605	0.79
PF08281	Sigma70_r4_2	0.79
PF06224	HTH_42	0.79
PF00294	PfkB	0.79
PF00072	Response_reg	0.79
PF02585	PIG-L	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	2.36
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.57
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	1.57
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.79
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.79
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.79
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	0.79
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	0.79
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.79
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.79
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.79
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.79
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.76 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.76 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.76 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.44 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	71.65 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.39 %
Unclassified	root	N/A	10.24 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.79 %

Name	Rank	Taxonomy	Distribution
Acidothermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales	29.92 %
Unclassified	root	N/A	10.24 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.15 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.36 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.36 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Acidothermales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales	29.92 %
Unclassified	root	N/A	10.24 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.57 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.79 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidothermales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	29.92 %
Unclassified	root	N/A	10.24 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.57 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.79 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidothermales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	29.92 %
Unclassified	root	N/A	10.24 %
Phytohabitans suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.57 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
unclassified Mycolicibacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → unclassified Mycolicibacterium	0.79 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidothermales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	29.92 %
Unclassified	root	N/A	10.24 %
Phytohabitans suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.57 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
Mycolicibacterium sp. 018/SC-01/001	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → unclassified Mycolicibacterium → Mycolicibacterium sp. 018/SC-01/001	0.79 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS01EM9LC	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	529	Open in IMG/M
2189573002\|GZIGXIF02IOQ5R	Not Available	535	Open in IMG/M
3300002245\|JGIcombinedJ26739_100908816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	763	Open in IMG/M
3300005187\|Ga0066675_11102697	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005332\|Ga0066388_108090112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	525	Open in IMG/M
3300005569\|Ga0066705_10514413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300005713\|Ga0066905_100264730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1330	Open in IMG/M
3300005764\|Ga0066903_104535044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	741	Open in IMG/M
3300005764\|Ga0066903_104680661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	728	Open in IMG/M
3300005764\|Ga0066903_107048260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300009137\|Ga0066709_101904741	Not Available	827	Open in IMG/M
3300009177\|Ga0105248_13426706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	504	Open in IMG/M
3300009522\|Ga0116218_1314362	Not Available	701	Open in IMG/M
3300009524\|Ga0116225_1466431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300009824\|Ga0116219_10534059	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300009839\|Ga0116223_10349498	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300010043\|Ga0126380_10052212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2215	Open in IMG/M
3300010046\|Ga0126384_10335964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1254	Open in IMG/M
3300010046\|Ga0126384_11988613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	556	Open in IMG/M
3300010048\|Ga0126373_13144770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	514	Open in IMG/M
3300010358\|Ga0126370_10003329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7810	Open in IMG/M
3300010361\|Ga0126378_10213100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2013	Open in IMG/M
3300010366\|Ga0126379_12816303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	582	Open in IMG/M
3300010373\|Ga0134128_10878466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	993	Open in IMG/M
3300010379\|Ga0136449_101051782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1303	Open in IMG/M
3300010401\|Ga0134121_10769887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	921	Open in IMG/M
3300010876\|Ga0126361_10542190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → unclassified Mycolicibacterium → Mycolicibacterium sp. 018/SC-01/001	510	Open in IMG/M
3300010877\|Ga0126356_10715067	Not Available	999	Open in IMG/M
3300011106\|Ga0151489_1641522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	577	Open in IMG/M
3300012209\|Ga0137379_10297179	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300012502\|Ga0157347_1067867	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300012948\|Ga0126375_10263858	Not Available	1174	Open in IMG/M
3300012957\|Ga0164303_11504377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	509	Open in IMG/M
3300014201\|Ga0181537_10110969	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300015373\|Ga0132257_102232666	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300016319\|Ga0182033_11012205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739	Open in IMG/M
3300017932\|Ga0187814_10175169	All Organisms → cellular organisms → Bacteria → Terrabacteria group	803	Open in IMG/M
3300017942\|Ga0187808_10469683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	580	Open in IMG/M
3300017955\|Ga0187817_10166259	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300017959\|Ga0187779_10540915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300017966\|Ga0187776_11488778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	519	Open in IMG/M
3300017973\|Ga0187780_10480041	Not Available	887	Open in IMG/M
3300017974\|Ga0187777_10533681	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300017994\|Ga0187822_10294014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	571	Open in IMG/M
3300018018\|Ga0187886_1234437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	698	Open in IMG/M
3300018035\|Ga0187875_10219887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	1043	Open in IMG/M
3300018058\|Ga0187766_11244407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	540	Open in IMG/M
3300018062\|Ga0187784_10214237	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300019887\|Ga0193729_1115252	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300021181\|Ga0210388_11786071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300021401\|Ga0210393_11346285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	571	Open in IMG/M
3300021406\|Ga0210386_10645692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300021407\|Ga0210383_10247760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1529	Open in IMG/M
3300021407\|Ga0210383_10353497	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300021407\|Ga0210383_11734503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	511	Open in IMG/M
3300021420\|Ga0210394_10612659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300021432\|Ga0210384_10520570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	1070	Open in IMG/M
3300021560\|Ga0126371_12632270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	609	Open in IMG/M
3300021560\|Ga0126371_13352663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300025604\|Ga0207930_1033712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1356	Open in IMG/M
3300025625\|Ga0208219_1029637	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300025898\|Ga0207692_10441112	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300026489\|Ga0257160_1027185	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300026557\|Ga0179587_10885055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	589	Open in IMG/M
3300027530\|Ga0209216_1087441	Not Available	543	Open in IMG/M
3300027619\|Ga0209330_1100615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300027767\|Ga0209655_10135872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	816	Open in IMG/M
3300027853\|Ga0209274_10252577	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300027869\|Ga0209579_10534916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	636	Open in IMG/M
3300027884\|Ga0209275_10470565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300027889\|Ga0209380_10601703	Not Available	637	Open in IMG/M
3300027908\|Ga0209006_10093180	Not Available	2675	Open in IMG/M
3300027965\|Ga0209062_1073169	Not Available	1530	Open in IMG/M
3300028773\|Ga0302234_10475403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	534	Open in IMG/M
3300028780\|Ga0302225_10451975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	601	Open in IMG/M
3300028798\|Ga0302222_10239596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	708	Open in IMG/M
3300028882\|Ga0302154_10072603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1905	Open in IMG/M
3300028906\|Ga0308309_10318702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300029913\|Ga0311362_10670372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300029917\|Ga0311326_10556246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	555	Open in IMG/M
3300029943\|Ga0311340_10283881	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300029951\|Ga0311371_10067992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5888	Open in IMG/M
3300030007\|Ga0311338_10047192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5780	Open in IMG/M
3300030007\|Ga0311338_10414396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300030007\|Ga0311338_10756912	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300030043\|Ga0302306_10373302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	546	Open in IMG/M
3300030056\|Ga0302181_10179618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	992	Open in IMG/M
3300030509\|Ga0302183_10111881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300030687\|Ga0302309_10442500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	626	Open in IMG/M
3300030739\|Ga0302311_10001153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31767	Open in IMG/M
3300031027\|Ga0302308_10328700	Not Available	935	Open in IMG/M
3300031236\|Ga0302324_100138500	All Organisms → cellular organisms → Bacteria	4019	Open in IMG/M
3300031236\|Ga0302324_102833375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300031259\|Ga0302187_10405297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	644	Open in IMG/M
3300031543\|Ga0318516_10652333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	599	Open in IMG/M
3300031564\|Ga0318573_10783155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300031572\|Ga0318515_10243583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	964	Open in IMG/M
3300031640\|Ga0318555_10595146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	599	Open in IMG/M
3300031679\|Ga0318561_10053691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2024	Open in IMG/M
3300031680\|Ga0318574_10593016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300031680\|Ga0318574_10706561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	591	Open in IMG/M
3300031681\|Ga0318572_10780305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300031708\|Ga0310686_109952403	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031708\|Ga0310686_112910435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	791	Open in IMG/M
3300031718\|Ga0307474_10974797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	671	Open in IMG/M
3300031751\|Ga0318494_10418406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	778	Open in IMG/M
3300031765\|Ga0318554_10113191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1529	Open in IMG/M
3300031771\|Ga0318546_10699876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	713	Open in IMG/M
3300031777\|Ga0318543_10041775	Not Available	1839	Open in IMG/M
3300031778\|Ga0318498_10518691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300031805\|Ga0318497_10682479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	576	Open in IMG/M
3300031823\|Ga0307478_11587895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300031833\|Ga0310917_10709473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	681	Open in IMG/M
3300031835\|Ga0318517_10120024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1163	Open in IMG/M
3300031893\|Ga0318536_10070623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1717	Open in IMG/M
3300031897\|Ga0318520_10374560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	867	Open in IMG/M
3300031912\|Ga0306921_12060955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300031942\|Ga0310916_11005031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	696	Open in IMG/M
3300031945\|Ga0310913_11273731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	510	Open in IMG/M
3300032044\|Ga0318558_10445401	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300032044\|Ga0318558_10576976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300032065\|Ga0318513_10677733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	505	Open in IMG/M
3300032067\|Ga0318524_10463992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300032261\|Ga0306920_102323849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	742	Open in IMG/M
3300032892\|Ga0335081_12735125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → unclassified Acidothermales → Acidothermales bacterium	502	Open in IMG/M
3300033134\|Ga0335073_10891150	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300033158\|Ga0335077_11261673	Not Available	720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.64%
Host-Associated	Host-Associated	2.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.34%
Aquatic	Environmental → Aquatic	6.30%
Plants	Host-Associated → Plants	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.59%
Peat	Environmental → Terrestrial → Peat	15.75%
Freshwater	Environmental → Aquatic → Freshwater	6.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.75%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.15%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.15%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027530	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066281

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_08408900	2170459012	Grass Soil	MVDRAAELARDSHARTRHAAVLMTEGSLLGWGTNGVPFPGEDHCYCKVAELG
FE1_07225510	2189573002	Grass Soil	MVERAAELARDSHSQTRYAAVLVKDESLLAWGTNG
JGIcombinedJ26739_1009088161	3300002245	Forest Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPYPG
Ga0066675_111026972	3300005187	Soil	MAQQMVERAAELARDSHARTRHAVVLVKDDSLLAWGTNGVPFPGEDHCYCK
Ga0066388_1080901121	3300005332	Tropical Forest Soil	MVERAAELARDSHARTRHAAVLVHAGSLLACGINGVPFPGEDHCYCKV
Ga0066705_105144132	3300005569	Soil	MVQRAAQLARDSHARTRHAVVLTNDDASSLLAWGT
Ga0066905_1002647301	3300005713	Tropical Forest Soil	MVERAAELARDSRARTRHAAVLVHAGSLLACGINGVPFPGEDHC
Ga0066903_1045350441	3300005764	Tropical Forest Soil	ERAAELARDSHARTRHAAVLMKDDSTLGWGANGVPFPGEDHCYCKFGEFGHHDMCG*
Ga0066903_1046806612	3300005764	Tropical Forest Soil	MVERAAELARDSHARTRHAAVLVHAGSLMACGINGVPFPGEDH
Ga0066903_1070482602	3300005764	Tropical Forest Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPF
Ga0066709_1019047413	3300009137	Grasslands Soil	MVERAAELARDSHAQTRYAAVLVKDESLLAWGTNGVPFPGE
Ga0105248_134267062	3300009177	Switchgrass Rhizosphere	MVERAAELAKDSHAQTRYAAVLVRDESLIAWGTNGVPFPGEDHCYCKFGES
Ga0116218_13143623	3300009522	Peatlands Soil	MVARAAELARDSHAQTRYAAVLVKDGSLLAWGTNGVPFP
Ga0116225_14664312	3300009524	Peatlands Soil	MVERAAELARDSHARTRHAAVLMRDGSMLAWGTNGVPFPGEDHCYCKF
Ga0116219_105340591	3300009824	Peatlands Soil	MVERAAELARDSHARTRHAAVLVRDESMLAWGTNGVPFPGEDHCHCKFAE
Ga0116223_103494982	3300009839	Peatlands Soil	MVERAAELARDSHARTRHAAVLMRDGSMLAWGTNGVPFP
Ga0126380_100522121	3300010043	Tropical Forest Soil	MVERAAELARDSHARTRHAAVLVRAGSLLACGINGVPFPGEDHCYCKAG
Ga0126384_103359642	3300010046	Tropical Forest Soil	MVERAAELARDSRARTRHAAVLVHAGSLLACGINGVPFPGEDHCYCKVG
Ga0126384_119886131	3300010046	Tropical Forest Soil	MAQQMVERAAELARDSHARTRHAAVLVHAGSLLACGINGVPFPGEDHCYCKVGQSGNH
Ga0126373_131447701	3300010048	Tropical Forest Soil	MAQQMVERAAELARDSHARTRHAVVLVKDDSLLAWGTNGVPFPGEDHC
Ga0126370_100033291	3300010358	Tropical Forest Soil	MAQHTVERAAELARDSHARTRHAVVLVKDDSLLASGTNGVPFPG
Ga0126378_102131003	3300010361	Tropical Forest Soil	MAERAAELARDSHARTRHAAVLVKAGSLLAWGINGVPFPG
Ga0126379_128163031	3300010366	Tropical Forest Soil	MVQRAAELARDSRARTRHAAVLTKDDSMLGWGTNGVP
Ga0134128_108784661	3300010373	Terrestrial Soil	MVERAAELAKDSHAQTRYAAVLVKDESLIAWGTNGVPFPGEDHCYCK
Ga0136449_1010517821	3300010379	Peatlands Soil	MVARAAELARDSHAQTRYAAVLVKDGSLLAWGTNGVPFPGEDH
Ga0134121_107698873	3300010401	Terrestrial Soil	MVERAAELARDSHAQTRYAAVLVKDESLLAWGTNGVPFPGEDHCY
Ga0126361_105421901	3300010876	Boreal Forest Soil	MAEQMVTRAAELARDSHARTRHAAVLVKDGSLIAWGTNGVPFPG
Ga0126356_107150671	3300010877	Boreal Forest Soil	MVERAAELARDSHARTRHAAVLMTEGSLLGWGTNGVPF
Ga0151489_16415221	3300011106	Soil	MAQQMVERAAELARDSHVRTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCKVAES
Ga0137379_102971794	3300012209	Vadose Zone Soil	MVERAAELARDSHSQTRYAAVLVKDESLLAWGTNGVPFPGE
Ga0157347_10678671	3300012502	Arabidopsis Rhizosphere	MVERAAELARDSHSQTRYAAVLVKDESLLAWGTNGVPFPG
Ga0126375_102638582	3300012948	Tropical Forest Soil	MVERAAELARDSRARTRHAAVLVHAGSLLACGINGVPFPGEDHCYCKVGESGNHDL
Ga0164303_115043772	3300012957	Soil	MVERAAELARDSHSQTRYAAVLVKDESLLAWGTNGVPFPGEDHCYCKLGEGGDHDRCRTH
Ga0181537_101109691	3300014201	Bog	MVERAAELARDSHARTRHAAVLIKDGSLLAWGTNG
Ga0132257_1022326661	3300015373	Arabidopsis Rhizosphere	MVERAAELARDSHSQTRYAAVLVKDESLLAWGTNGVPFPGEDHC
Ga0182033_110122053	3300016319	Soil	MVERAAELARDSHARSRHAAVLVKDGSMLGWGTNGVPFPG
Ga0187814_101751692	3300017932	Freshwater Sediment	VAQQMVERAAELARDSHARTRHAAVLIKDGSLLAWG
Ga0187808_104696831	3300017942	Freshwater Sediment	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVP
Ga0187817_101662591	3300017955	Freshwater Sediment	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGV
Ga0187779_105409152	3300017959	Tropical Peatland	MVARAAELARDSHARSRHAAVLFKDGSMLGWGTNGVPFPGEDHCYC
Ga0187776_114887782	3300017966	Tropical Peatland	MVERAAGLAKDSHARTRHAAVLAKDGSMVAWGTNGVPFPGE
Ga0187780_104800411	3300017973	Tropical Peatland	MVERAAELARDSHARTRHAAVLVRGDSMLAWGTNGVP
Ga0187777_105336811	3300017974	Tropical Peatland	MVERAAELARDSHARSRHAAVLVKDGSMLGWGTNG
Ga0187822_102940141	3300017994	Freshwater Sediment	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYC
Ga0187886_12344372	3300018018	Peatland	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGE
Ga0187875_102198873	3300018035	Peatland	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGEDHCYCKYAE
Ga0187766_112444072	3300018058	Tropical Peatland	MVERAAELARDSHARSRHAAVLVKDGSMLGWGTNGVPFPGEDHCYC
Ga0187784_102142372	3300018062	Tropical Peatland	MVARAAELARDSHARSRHAAVLFKDGSMLGWGTNGVPFPGE
Ga0193729_11152521	3300019887	Soil	MVERAAELARDSHARTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCRAG
Ga0210388_117860712	3300021181	Soil	VERAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYCKVADFGQ
Ga0210393_113462852	3300021401	Soil	MVVRAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYCKAGDFGQ
Ga0210386_106456921	3300021406	Soil	MVQRAADLARDSHARTRHAAVLVKDDGSSLLAWGTNGVPFPGEDHCYCK
Ga0210383_102477603	3300021407	Soil	VERAAELARDSRARTRHAAALIKDGSMIAWGTNGVPFPGEDHCYCKIGELGHHDH
Ga0210383_103534971	3300021407	Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNG
Ga0210383_117345031	3300021407	Soil	MVERAAGLAKDSRAKTRHAAVLVKDGSMIAWGTNGVPY
Ga0210394_106126592	3300021420	Soil	MVQRAADLARDSHARTRHAAVLVKDDGSSLLAWGTNGVPFPGEDHC
Ga0210384_105205702	3300021432	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPYPGEDHCYCKVGDFGQHDQ
Ga0126371_126322701	3300021560	Tropical Forest Soil	MAQHTVERAAELARDSHARTRHAVVLVKDDSLLAWGTNGVPFPGE
Ga0126371_133526631	3300021560	Tropical Forest Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNGV
Ga0207930_10337121	3300025604	Arctic Peat Soil	VAQQMMERAAELARDSHARTRHAAALVRDGSLLAWGTNG
Ga0208219_10296371	3300025625	Arctic Peat Soil	MVERAAELARDSHARTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCRAGELG
Ga0207692_104411122	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MVERAAELARDSHARTRHAAVLVADGSLLAWGTNGVPFPGEDHCYCKVAEHGNHDRC
Ga0257160_10271851	3300026489	Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPYPGEDH
Ga0179587_108850552	3300026557	Vadose Zone Soil	LNRQDSHLVQQMVERAAELARDSHARTRHAAVLVRDGSLLAWGTNGVPFPGEDHC
Ga0209216_10874411	3300027530	Forest Soil	MVERAAGLAKDSRAKTRHAAVLVKDGSMVAWGTNGV
Ga0209330_11006151	3300027619	Forest Soil	MVERAAGLAKDSRAKTRHAAVLVKDGSMIAWGTNGVPYPGED
Ga0209655_101358722	3300027767	Bog Forest Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPYPGEDHCYCKVGDFGQHDQCRIH
Ga0209274_102525771	3300027853	Soil	VAQQMVERAAELARDSHARTRHAAVLMRDESLLAWGTNG
Ga0209579_105349162	3300027869	Surface Soil	MVTRAAELARDSHARTRTAAVLVKDGSMLGWGTNGVPFPGEDHCYCKVGDIRNHDQ
Ga0209275_104705652	3300027884	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPYPGEDHC
Ga0209380_106017032	3300027889	Soil	MVERAAELARDSHARTRHAAVLIKDGSLLAWGTNGVPFPGEDHCYCKFAE
Ga0209006_100931804	3300027908	Forest Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGANGVPYP
Ga0209062_10731693	3300027965	Surface Soil	MVQRAAELARDSRARTRHAAVLVRGGSLLGWGTNGVPFPGE
Ga0302234_104754031	3300028773	Palsa	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNAVPFPGEDHCYCKVG
Ga0302225_104519751	3300028780	Palsa	MVERAAELARDSHARTRHAAVLVRDGSLLAWGTNGV
Ga0302222_102395961	3300028798	Palsa	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNAVPFPGEDHCYCKVGDFGQHD
Ga0302154_100726031	3300028882	Bog	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFP
Ga0308309_103187021	3300028906	Soil	MVERAAELARDSHARTRHAAVLVKDGSLIAWGTNGVPFPGEDHCYCKFGQLGHHD
Ga0311362_106703721	3300029913	Bog	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGEDHCYCKY
Ga0311326_105562461	3300029917	Bog	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGEDHCYCK
Ga0311340_102838811	3300029943	Palsa	MVERAAELARDSHARTRHAALLVRDGSMLAWGTNGVPFPG
Ga0311371_100679928	3300029951	Palsa	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNAVPFPGEDHCYCKVGDFGQH
Ga0311338_100471927	3300030007	Palsa	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGEDHCYC
Ga0311338_104143961	3300030007	Palsa	VERAAELARDSHARTRHAAVLVRDGSLLAWGTNGVPFPGEDHCFCKFGEYGHH
Ga0311338_107569121	3300030007	Palsa	VERAAELARDSHARTRHAVVLVKDGSMLAWGTNGVPFPGEDHCYCKFGELG
Ga0302306_103733021	3300030043	Palsa	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNAVPFPG
Ga0302181_101796181	3300030056	Palsa	VERAAELARDSHARTRHAAVLVRDGSLLAWGTNGVPF
Ga0302183_101118811	3300030509	Palsa	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGEDHCYCKYA
Ga0302309_104425002	3300030687	Palsa	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNGVPFPGEDHCYCKYAEFGVHDNC
Ga0302311_1000115331	3300030739	Palsa	MVERAAGLAKDSHARTRHAAVLVKDGSMVAWGTNG
Ga0302308_103287002	3300031027	Palsa	MVERAAELARDSHARTRHAAVLVRDGSLLAWGTNGVP
Ga0302324_1001385001	3300031236	Palsa	MVERAAELARDSHARTRHAALLVRDGSMLAWGTNGVPFPGEDHCYC
Ga0302324_1028333752	3300031236	Palsa	MVERAAELARDSHARTRHAAVLVRDGSLLAWGTNGVPFPGEDHCYC
Ga0302187_104052972	3300031259	Bog	MVERAAGLAKDSHARTRHAAVLVKDGSMMAWGTNGVPFPGEDHCYCKYAEFGVHD
Ga0318516_106523331	3300031543	Soil	MVDRAAGLARDSHARTRHAAVLVKDDNLLAWGTNGVPFPGEDHCYCKVGE
Ga0318573_107831552	3300031564	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCY
Ga0318515_102435831	3300031572	Soil	MVDRAAGLARDSHARTRHAAVLVKDDNLLAWGTNGVPFPGEDHCYCKVGESG
Ga0318555_105951461	3300031640	Soil	MAEQMVERAAELARDSHARTRHAAVLVQAGSLLACGINGVPFPGEDHCYCKVGESGSHDL
Ga0318561_100536911	3300031679	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVP
Ga0318574_105930161	3300031680	Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPG
Ga0318574_107065612	3300031680	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYCRVGD
Ga0318572_107803052	3300031681	Soil	MVARAAELARDSHARTRHAAVLVKGGSMLGWGTNGVPFPGEDHCYCKF
Ga0310686_1099524031	3300031708	Soil	MAEQMVERAAELARDSHARTRHAAVLVRDESLLAWGTNGVPFPGEDHCH
Ga0310686_1129104351	3300031708	Soil	MVERAAGLAKDSRAKTRHAAVLVKDGSMIAWGTNGVPYPGEDHCYCK
Ga0307474_109747972	3300031718	Hardwood Forest Soil	MVERAAELAKDSHARTRHAAVLVKDGSMLAWGTNGVPF
Ga0318494_104184061	3300031751	Soil	MVERAAELARDSRARTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCKVAEFGHHDQCRT
Ga0318554_101131911	3300031765	Soil	MVERAAELARDSRARTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCKVAEFGHHDQC
Ga0318546_106998763	3300031771	Soil	MVDRAAGLARDSHARTRHAAVLVKDDNLLAWGTNGVPFPGEDHCYCRVGES
Ga0318543_100417754	3300031777	Soil	LTRHDSGVAQQMVERAAELARDSHARTRHAAVLVKDASLLACGTNGVPFPGEDHCYCKVA
Ga0318498_105186911	3300031778	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYCKFGEL
Ga0318497_106824792	3300031805	Soil	MVERAAELARDSHARTRHAAVLVKDGSMLAWGTNGVPFPGEDHCYCKVGEFGHHDRCR
Ga0307478_115878952	3300031823	Hardwood Forest Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPYPGE
Ga0310917_107094731	3300031833	Soil	MVERAAELARDSHARTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCKA
Ga0318517_101200243	3300031835	Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYCKFGDLSQ
Ga0318536_100706231	3300031893	Soil	MVERAAELARDSHARTRHAAVLVKDGSLLAWGTNGVPFPGEDHCYCKVGEFGHHDRCRTH
Ga0318520_103745601	3300031897	Soil	MVDRAAGLARDSHARTRHAAVLVKDDNLLAWGTNGVPFPGEDHCYCRVGESGDHDQCRTH
Ga0306921_120609551	3300031912	Soil	MVERAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHC
Ga0310916_110050312	3300031942	Soil	MAEQMVERAAELARDSHARTRHAAVLVQAGSLLACGINGVP
Ga0310913_112737311	3300031945	Soil	MVERAAELARDSHARTRHAAVLMKAGSLLAWGINGVPFPGEDHCYCKIGESG
Ga0318558_104454012	3300032044	Soil	MVERAAELARDSHARTRHAAVLVKDGSLLAWGTNGVPFPGEDH
Ga0318558_105769761	3300032044	Soil	MVARAAELARDSHARTRHAAVLVKGGSMLGWGTNGVPFPGEDHCY
Ga0318513_106777331	3300032065	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPG
Ga0318524_104639921	3300032067	Soil	MVARAAELARDSHARTRHAAVLVKDGSMLGWGTNGVPFPGEDHCYCKLG
Ga0306920_1023238492	3300032261	Soil	MVERAAELARDSRARTRHAAVLVKDGSLLAWGTNGVPFP
Ga0335081_127351252	3300032892	Soil	MVERAAGLAKDSHARTRHAAALVKDGSMVSWGTNGVPFPGEDHCYCKYAEFGVHDNCR
Ga0335073_108911502	3300033134	Soil	VAEQMVERAAELARDSHARTRHAAILVQDESMIAWGTNG
Ga0335077_112616731	3300033158	Soil	MVERAADLARDSRARTRHAAVLMQHGSLLAWGTNGVPFPGEDHCYCKFGDYGHHDLCR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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