Metagenome / Metatranscriptome Family F066274

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066274
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	52 residues
Representative Sequence	MKLELTSDEIGWVKYALIRASATINGRDKEMTLKEERLLGRIVKKIEKQEK
Number of Associated Samples	103
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	39.37 %
% of genes near scaffold ends (potentially truncated)	22.83 %
% of genes from short scaffolds (< 2000 bps)	79.53 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (45.669 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (44.094 % of family members)
Environment Ontology (ENVO)	Unclassified (81.890 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (64.567 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.77% β-sheet: 0.00% Coil/Unstructured: 58.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13516	LRR_6	3.94
PF03851	UvdE	2.36
PF00004	AAA	0.79
PF05050	Methyltransf_21	0.79
PF07486	Hydrolase_2	0.79
PF05496	RuvB_N	0.79
PF08335	GlnD_UR_UTase	0.79
PF00403	HMA	0.79
PF06067	DUF932	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	2.36
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.79
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.79
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.79
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.79
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
cellular organisms	root	All Organisms → cellular organisms	44.09 %
Viruses	superkingdom	All Organisms → Viruses	10.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	43.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	43.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	43.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	43.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	43.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	31.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	31.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.24 %
Pelagibacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001392\|Lau_10014701	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2730	Open in IMG/M
3300001683\|GBIDBA_10035914	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2618	Open in IMG/M
3300001683\|GBIDBA_10158718	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	541	Open in IMG/M
3300002484\|JGI25129J35166_1049075	Not Available	822	Open in IMG/M
3300002514\|JGI25133J35611_10140956	Not Available	670	Open in IMG/M
3300002518\|JGI25134J35505_10008700	Not Available	3487	Open in IMG/M
3300002519\|JGI25130J35507_1002924	Not Available	4967	Open in IMG/M
3300002519\|JGI25130J35507_1054742	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	783	Open in IMG/M
3300002760\|JGI25136J39404_1118211	Not Available	502	Open in IMG/M
3300003690\|PicViral_1002567	All Organisms → Viruses → Predicted Viral	4967	Open in IMG/M
3300003702\|PicMicro_10018921	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5002	Open in IMG/M
3300004280\|Ga0066606_10337199	Not Available	529	Open in IMG/M
3300005400\|Ga0066867_10020747	Not Available	2715	Open in IMG/M
3300005400\|Ga0066867_10048086	Not Available	1671	Open in IMG/M
3300005402\|Ga0066855_10112424	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	860	Open in IMG/M
3300005423\|Ga0066828_10191593	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	678	Open in IMG/M
3300005424\|Ga0066826_10040047	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1831	Open in IMG/M
3300005427\|Ga0066851_10084106	Not Available	1045	Open in IMG/M
3300005514\|Ga0066866_10039749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1803	Open in IMG/M
3300005596\|Ga0066834_10074836	Not Available	1118	Open in IMG/M
3300005596\|Ga0066834_10217908	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	604	Open in IMG/M
3300005604\|Ga0066852_10174671	Not Available	745	Open in IMG/M
3300006091\|Ga0082018_1029161	Not Available	1002	Open in IMG/M
3300006340\|Ga0068503_10191658	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1904	Open in IMG/M
3300006736\|Ga0098033_1156392	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	638	Open in IMG/M
3300006736\|Ga0098033_1191046	Not Available	568	Open in IMG/M
3300006753\|Ga0098039_1017358	Not Available	2608	Open in IMG/M
3300006900\|Ga0066376_10086971	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1955	Open in IMG/M
3300006902\|Ga0066372_10102607	All Organisms → Viruses → Predicted Viral	1478	Open in IMG/M
3300006923\|Ga0098053_1018892	Not Available	1507	Open in IMG/M
3300006924\|Ga0098051_1209200	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	508	Open in IMG/M
3300007510\|Ga0105013_1549962	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	536	Open in IMG/M
3300007511\|Ga0105000_1047512	Not Available	3963	Open in IMG/M
3300007512\|Ga0105016_1049167	All Organisms → Viruses → Predicted Viral	3030	Open in IMG/M
3300007513\|Ga0105019_1002190	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	28315	Open in IMG/M
3300007758\|Ga0105668_1034778	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	775	Open in IMG/M
3300007758\|Ga0105668_1069989	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	798	Open in IMG/M
3300007770\|Ga0105015_1024227	All Organisms → Viruses → Predicted Viral	3206	Open in IMG/M
3300008216\|Ga0114898_1004028	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	6865	Open in IMG/M
3300008217\|Ga0114899_1109427	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	925	Open in IMG/M
3300008470\|Ga0115371_10005680	Not Available	526	Open in IMG/M
3300009108\|Ga0117920_1104709	Not Available	1151	Open in IMG/M
3300009149\|Ga0114918_10000982	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	25244	Open in IMG/M
3300009149\|Ga0114918_10010086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	7639	Open in IMG/M
3300009173\|Ga0114996_11153747	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	544	Open in IMG/M
3300009409\|Ga0114993_10245727	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1372	Open in IMG/M
3300009409\|Ga0114993_10276487	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1282	Open in IMG/M
3300009418\|Ga0114908_1203600	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	614	Open in IMG/M
3300009441\|Ga0115007_10887972	Not Available	607	Open in IMG/M
3300009622\|Ga0105173_1018465	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300009786\|Ga0114999_10063115	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	3335	Open in IMG/M
3300010151\|Ga0098061_1078041	Not Available	1253	Open in IMG/M
3300010155\|Ga0098047_10111079	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300013098\|Ga0164320_10100194	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1253	Open in IMG/M
3300013099\|Ga0164315_11014834	Not Available	658	Open in IMG/M
3300013101\|Ga0164313_10900449	Not Available	723	Open in IMG/M
3300014913\|Ga0164310_10574813	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	651	Open in IMG/M
3300017702\|Ga0181374_1033513	Not Available	895	Open in IMG/M
3300017703\|Ga0181367_1094725	Not Available	513	Open in IMG/M
3300017718\|Ga0181375_1028203	Not Available	955	Open in IMG/M
3300017718\|Ga0181375_1069484	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	577	Open in IMG/M
3300017775\|Ga0181432_1056167	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300017775\|Ga0181432_1218242	Not Available	599	Open in IMG/M
3300020327\|Ga0211573_1031850	All Organisms → Viruses → Predicted Viral	1433	Open in IMG/M
3300020330\|Ga0211572_1041410	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1208	Open in IMG/M
3300020344\|Ga0211570_1039951	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1204	Open in IMG/M
3300020389\|Ga0211680_10354742	Not Available	535	Open in IMG/M
3300021084\|Ga0206678_10387933	Not Available	658	Open in IMG/M
3300021087\|Ga0206683_10010509	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5727	Open in IMG/M
3300021089\|Ga0206679_10539982	Not Available	604	Open in IMG/M
3300021352\|Ga0206680_10067595	Not Available	1372	Open in IMG/M
3300021442\|Ga0206685_10141459	Not Available	803	Open in IMG/M
3300021443\|Ga0206681_10084121	Not Available	1240	Open in IMG/M
3300021443\|Ga0206681_10236425	Not Available	712	Open in IMG/M
3300021791\|Ga0226832_10066136	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1271	Open in IMG/M
3300021791\|Ga0226832_10120783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium	974	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10293099	Not Available	671	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10004968	Not Available	3754	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10058240	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1208	Open in IMG/M
(restricted) 3300023276\|Ga0233410_10065243	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1101	Open in IMG/M
(restricted) 3300024259\|Ga0233437_1345469	Not Available	560	Open in IMG/M
3300024262\|Ga0210003_1014275	Not Available	5179	Open in IMG/M
3300024262\|Ga0210003_1066175	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1762	Open in IMG/M
3300025072\|Ga0208920_1024531	All Organisms → Viruses → Predicted Viral	1286	Open in IMG/M
3300025112\|Ga0209349_1016588	Not Available	2683	Open in IMG/M
3300025122\|Ga0209434_1094749	Not Available	860	Open in IMG/M
3300025122\|Ga0209434_1153672	Not Available	624	Open in IMG/M
3300025125\|Ga0209644_1111505	Not Available	649	Open in IMG/M
3300025125\|Ga0209644_1148145	Not Available	560	Open in IMG/M
3300025133\|Ga0208299_1004238	Not Available	8592	Open in IMG/M
3300025141\|Ga0209756_1224761	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	703	Open in IMG/M
3300025241\|Ga0207893_1067806	Not Available	514	Open in IMG/M
3300025267\|Ga0208179_1008235	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3589	Open in IMG/M
3300025268\|Ga0207894_1010165	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1791	Open in IMG/M
3300025873\|Ga0209757_10056204	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300025873\|Ga0209757_10178480	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	669	Open in IMG/M
3300026103\|Ga0208451_1001666	All Organisms → Viruses → Predicted Viral	1966	Open in IMG/M
3300026186\|Ga0208128_1018674	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1805	Open in IMG/M
3300026205\|Ga0208406_1029472	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1415	Open in IMG/M
3300026259\|Ga0208896_1117239	Not Available	735	Open in IMG/M
3300026260\|Ga0208408_1074694	Not Available	1048	Open in IMG/M
3300026263\|Ga0207992_1011938	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2933	Open in IMG/M
3300027801\|Ga0209091_10002272	Not Available	16302	Open in IMG/M
3300027838\|Ga0209089_10402327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	758	Open in IMG/M
3300027847\|Ga0209402_10384848	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	850	Open in IMG/M
3300031141\|Ga0308021_10122816	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300031605\|Ga0302132_10209440	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	936	Open in IMG/M
3300031627\|Ga0302118_10129757	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1242	Open in IMG/M
3300031627\|Ga0302118_10514138	Not Available	524	Open in IMG/M
3300031655\|Ga0308018_10214964	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	649	Open in IMG/M
3300031757\|Ga0315328_10200976	Not Available	1165	Open in IMG/M
3300031775\|Ga0315326_10095138	All Organisms → Viruses → Predicted Viral	1931	Open in IMG/M
3300031800\|Ga0310122_10017577	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	4214	Open in IMG/M
3300031861\|Ga0315319_10458097	Not Available	638	Open in IMG/M
3300031861\|Ga0315319_10589452	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	550	Open in IMG/M
3300031886\|Ga0315318_10300607	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	920	Open in IMG/M
3300031886\|Ga0315318_10465913	Not Available	721	Open in IMG/M
3300032011\|Ga0315316_10029524	Not Available	4285	Open in IMG/M
3300032048\|Ga0315329_10349141	Not Available	787	Open in IMG/M
3300032132\|Ga0315336_1299929	Not Available	541	Open in IMG/M
3300032278\|Ga0310345_11845637	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	589	Open in IMG/M
3300032360\|Ga0315334_10716458	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	865	Open in IMG/M
3300032360\|Ga0315334_10850072	Not Available	790	Open in IMG/M
3300032360\|Ga0315334_11082961	Not Available	693	Open in IMG/M
3300032360\|Ga0315334_11578511	Not Available	561	Open in IMG/M
3300032360\|Ga0315334_11771327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	525	Open in IMG/M
3300032820\|Ga0310342_103584158	Not Available	512	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.21%
Sediment	Environmental → Aquatic → Sediment	0.79%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	58.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.54%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	8.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.51%
Coastal	Environmental → Aquatic → Marine → Coastal	4.72%
Inlet	Environmental → Aquatic → Marine → Inlet	3.94%
Strait	Environmental → Aquatic → Marine → Strait	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	52.76%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	16.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.51%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.72%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	3.15%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	3.15%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.94%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.36%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.36%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.57%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	1.57%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	44.09%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	16.54%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.72%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	4.72%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	3.15%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	3.15%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.94%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.57%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.57%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	1.57%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.57%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	1.57%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.57%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.79%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume	0.79%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	0.79%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.79%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001392	ELSC Metagenome	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300003702	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial Assembly	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007510	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300007511	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007512	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300007770	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008470	Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563	Environmental	Open in IMG/M
3300009108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300013098	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm	Environmental	Open in IMG/M
3300013099	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay6, Core 4569-2, 0-3 cm	Environmental	Open in IMG/M
3300013101	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm	Environmental	Open in IMG/M
3300014913	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay1, Core 4569-9, 0-3 cm	Environmental	Open in IMG/M
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020327	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)	Environmental	Open in IMG/M
3300020330	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556097-ERR599147)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022931 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MG	Environmental	Open in IMG/M
3300023112 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MG	Environmental	Open in IMG/M
3300023276 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MG	Environmental	Open in IMG/M
3300024259 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MG	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026103	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)	Environmental	Open in IMG/M
3300026186	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B (SPAdes)	Environmental	Open in IMG/M
3300026205	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026263	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300031141	Marine microbial communities from water near the shore, Antarctic Ocean - #351	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental	Open in IMG/M
3300031655	Marine microbial communities from water near the shore, Antarctic Ocean - #282	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Lau_100147013	3300001392	Black Smokers Hydrothermal Plume	MKLELTSDEIGWVKYALMRASATLGRDKDMTLKEERLLLRIKRKIERQEKQRGEG*
GBIDBA_100359144	3300001683	Hydrothermal Vent Plume	MKLELTSDEIGWVKYALIRASATLNGRDKDMTLQEERTLLRIVKKIEKQDK*
GBIDBA_101587183	3300001683	Hydrothermal Vent Plume	MKLELTSDEIGWVKYALIRASATINGRDKEMTLKEERLLGRIVKKIEKQEK*
JGI25129J35166_10490751	3300002484	Marine	MMXELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKLLMRLVRKIEKQEEEYLK*
JGI25133J35611_101409563	3300002514	Marine	MKLELTSDEIGWVKYALIRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
JGI25134J35505_1000870010	3300002518	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK*
JGI25130J35507_10029249	3300002519	Marine	MMIELTSDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK*
JGI25130J35507_10547423	3300002519	Marine	MILELTXEEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
JGI25136J39404_11182111	3300002760	Marine	PHTRMKLELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEK*
PicViral_10025678	3300003690	Marine, Hydrothermal Vent Plume	MILELTNDEVNWVKYSLMRASSERDKEMTLKEERLLLRIVRKIEGQEKQRGKG*
PicMicro_100189218	3300003702	Marine, Hydrothermal Vent Plume	MILELTNDEIDWVKYSLIRASAERDKEMTLKEERLLLRIVRKIERQEKQRGKG*
Ga0066606_103371992	3300004280	Marine	MRIDLTPDEIGWVKYALARAASTMQGRDPDMTHKEEKLLMRLARKIEKQEEEYLK*
Ga0066867_1002074711	3300005400	Marine	MILELTREEISWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
Ga0066867_100480865	3300005400	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKLLMRLVRKIEKQEEEYLK*
Ga0066855_101124243	3300005402	Marine	MGQPHTRMKLELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEK*
Ga0066828_101915933	3300005423	Marine	MILELTSEEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
Ga0066826_100400477	3300005424	Marine	MILELTREEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
Ga0066851_100841062	3300005427	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKLLMRLVRKIEKQEEENLK*
Ga0066866_100397492	3300005514	Marine	MILELTREEISWVKYTLMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
Ga0066834_100748363	3300005596	Marine	MMIELTSDEIGWVKYALTRATSTMEGRDPDMTRKEEKLLMRLVRKIEKQEEEYLK*
Ga0066834_102179084	3300005596	Marine	TSEEIGWVKYALMRSSATLNGRDKEMTLKEERLLKRIVKKIEEQEK*
Ga0066852_101746711	3300005604	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPAMTRKEEKLLMRLVRKIEKQEEENLK*
Ga0082018_10291612	3300006091	Marine	MMIELTSDEIGWVKYALTRAASTMEGRDPALTRKEENLLLRIGRAIEKQEKEYLK*
Ga0068503_101916587	3300006340	Marine	LTSEEIGWVKYALIRASATLHGRDKEMTLKEERRLGRIVRKIEEQEK*
Ga0098033_11563921	3300006736	Marine	MGQPHTRMILELTSEEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK*
Ga0098033_11910461	3300006736	Marine	IELASDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK*
Ga0098039_10173584	3300006753	Marine	MMVELASDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK*
Ga0066376_100869714	3300006900	Marine	MILELTNDEVNWVKYSLMRASSERDKEMTLKEERLLLRIVRKIERQEKQRGKG*
Ga0066372_101026075	3300006902	Marine	MKVELTSEEIGWVKYALIRASATLQGRDKEMTLKEERLLGRIVRKIEEQEKQ*
Ga0098053_10188923	3300006923	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKILMRLVRKIEKQEEENLK*
Ga0098051_12092001	3300006924	Marine	MILELTRDEIGWVKYALMRSSATLNGRDKEMTLKEERLLERI
Ga0105013_15499622	3300007510	Marine	MGQPHTTMTLELTSEEIGWIKYSLIRASSSLRGRDSAMTLREERLLLRIARKIEKQEKQRGEG*
Ga0105000_10475123	3300007511	Marine	MKIELTLDEIGWVKYALTRAASTMEGRDPDMTRKEERLLIRLARKIEKQEEENLK*
Ga0105016_10491673	3300007512	Marine	MKIELTLDEIGWVKYALTRAASTMEGRDPDMTRKEERLLTRLARKIEKQEEENLK*
Ga0105019_100219032	3300007513	Marine	MTLELTSEEIGWIKYSLIRASSSLRGRDSAMTLREERLLLRIARKIEKQEKQRGEG*
Ga0105668_10347781	3300007758	Background Seawater	EIGWVKYALIRASATLQGRDKEMTLKEERLLGRIARKIEEQEKRRGEG*
Ga0105668_10699891	3300007758	Background Seawater	MILELTNDEIGWVKYSLIRASAERDKEMTLKEERLLLRIVRKIERQEKQRGKG*
Ga0105015_10242278	3300007770	Marine	MKIELTLDEIGWVKYALTRAASTMEGRDPDMTRKEERLLTRIARKIEKQEEENLK*
Ga0114898_100402815	3300008216	Deep Ocean	MKVELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEKQRG*
Ga0114899_11094273	3300008217	Deep Ocean	TRMILELTRDEIGWAKYALIRASSTLGGRDKDMTLKEERLLLRIVRKIEEQEKQRG*
Ga0115371_100056801	3300008470	Sediment	MILELTNDEIGWVKYALIRASATLNGRDTEMTPKEERLLGRIVKKIEKQE*
Ga0117920_11047095	3300009108	Marine	MKIELTLDEIGWVKYALTRAASTMEGRDPDMTRKEERLLIRLARKIEKQEEEN
Ga0114918_1000098217	3300009149	Deep Subsurface	MKIELTSDEIGWVKYALARAASTMQGRDPDMTHKEEKLLMRLARKIEKQEGKNLK*
Ga0114918_1001008610	3300009149	Deep Subsurface	MILELTSEELGWVKYALIRASATLQGRDKDMTLKEERKLLKIVNKIEKQEK*
Ga0114996_111537472	3300009173	Marine	MKLELTSDEIGWVKYALIRASATINGRDTEITLKEERLLGRIVRKIEQQEMDL*
Ga0114993_102457275	3300009409	Marine	MGQPHTEMKLELTSDEIGWVKYALIRASATINGRDTEITLKEERLLGRIVRKIEQQEMDL
Ga0114993_102764872	3300009409	Marine	MILELTSEELGWVKYALIRASASLEGRDKDMTLKEERKLLRIANKIEKQEK*
Ga0114908_12036004	3300009418	Deep Ocean	MKVELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEK
Ga0115007_108879723	3300009441	Marine	MGQPHTEMKLELTSDEIGWVKYALIRASATINGRDTEITLKEERLLGRIVRKIEQQEK*
Ga0105173_10184654	3300009622	Marine Oceanic	MILELTSDEIGWLKYALIRASDEAAEYEKAQATPNGRDKDMTLKEERLLLRIVRKIERQEKQRGKG*
Ga0114999_100631156	3300009786	Marine	MGQPHTEMKLELTSDEIGWLKYALIRASATLNGRDTEITLKEERLLGRIVRKIEQQEMDL
Ga0098061_10780411	3300010151	Marine	MIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKLLMRLVRKIEKQEEEYLK*
Ga0098047_101110792	3300010155	Marine	MIELASDEIGWVKYALTRAASTMEGRDPAMTRKEEKLLMRLVRKIEKQEEENLK*
Ga0164320_101001944	3300013098	Marine Sediment	MKLELTSDEIGWFKYALIRASATINGRDKEMTLKEERLLGRIVKKIEKQEK*
Ga0164315_110148341	3300013099	Marine Sediment	MKLELTSDEIGWVKYALIRASATLNGRDKDMTLQEERILLRIVKKIEQQDK*
Ga0164313_109004494	3300013101	Marine Sediment	MILELTREEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIE
Ga0164310_105748131	3300014913	Marine Sediment	MKLELTSDEIGWVKYALIRASATINGRDTEMTLQEERTLL
Ga0181374_10335133	3300017702	Marine	MMVELASDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK
Ga0181367_10947252	3300017703	Marine	MILELTREEIGWVKYALMRSSATLNGRDKEMTLKEERLLEKIVKKIEKQEK
Ga0181375_10282034	3300017718	Marine	MMIELASDEIVWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK
Ga0181375_10694844	3300017718	Marine	MILELTSEEIGWVKYALMRSSATINGRDKEMTLKEERLLERIVKKIEK
Ga0181432_10561673	3300017775	Seawater	MMIKLTPDEIGWIKYALARAASTMEGRDPALTRKEENLLLRIGRAIEKQEKEYLK
Ga0181432_12182422	3300017775	Seawater	MTIKLTSDEIGWVKYALTRAASTLEGRDPDLTRREENRLLRLARKIETQEKEYLK
Ga0211573_10318504	3300020327	Marine	MILELTREEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0211572_10414104	3300020330	Marine	MILELTSEEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0211570_10399515	3300020344	Marine	MILELTREEISWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0211680_103547422	3300020389	Marine	MILELTNDEVNWVKYSLMRASSERDKEMTLKEERLLLRIVRKIEGQEKQRGKG
Ga0206678_103879332	3300021084	Seawater	MIIDLTPDEIGWVKYALARAASTMEGRDPDMTRKEERLLMRLARKIEKQEEEYLK
Ga0206683_100105099	3300021087	Seawater	MILELTSDEIGWVKYALIRSSATLNGRDKDMTLKEERKLLRIVQKIEEQEK
Ga0206679_105399823	3300021089	Seawater	PHTRMILELTSEEIGWVKYALIRSSATLNGRDKDMTLKEERKLLRIVQKIEEQEK
Ga0206680_100675954	3300021352	Seawater	MMIELTSDEIGWVKYALTRAASTMEGRDPDMTRKEERLLMRLARKIEKQQEENLK
Ga0206685_101414594	3300021442	Seawater	MMIELTSDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLARKIEKQEEENLK
Ga0206681_100841212	3300021443	Seawater	MKLELTSDEIGWVKYALIRSSATLNGRDKDMTLKEERKLLRIVRKIEEQEK
Ga0206681_102364252	3300021443	Seawater	MKIELTPDEIGWVKYALTRAASTLEGRDPDLTRREENRLLRLARKIETQEKEYLK
Ga0226832_100661361	3300021791	Hydrothermal Vent Fluids	MGQTDTRMILELTRDEIGWVKYALIRASSTLGGRDKDMTLKE
Ga0226832_101207832	3300021791	Hydrothermal Vent Fluids	MGHAHTRMILELTSDEIGWVKYSLIRASSTLNGRDKNMTLKEERLLLRIVRKIEEQEKQQRG
(restricted) Ga0233433_102930992	3300022931	Seawater	MRIDLTSDEIGWVKYALARAASTMQGRDPDMTHKEEKLLMRLARKIEKQEEEYLK
(restricted) Ga0233411_100049688	3300023112	Seawater	MRIDLTPDEIGWVKYALARAASTMQGRDPDMTHKEEKLLMRLARKIEKQEEEYLK
(restricted) Ga0233411_100582404	3300023112	Seawater	MILELTSEEIGWVKYALIRSSATLNGRDKDMTLKEERKLLRIVTKIEKQEK
(restricted) Ga0233410_100652431	3300023276	Seawater	WVKYALIRSSATLNGRDKDMTLKEERKLLRIVTKIEKQEK
(restricted) Ga0233437_13454691	3300024259	Seawater	MRIDLTSDEIGWVKYALARAASTMQGRDPDMTHKEE
Ga0210003_10142755	3300024262	Deep Subsurface	MKIELTSDEIGWVKYALARAASTMQGRDPDMTHKEEKLLMRLARKIEKQEGKNLK
Ga0210003_10661756	3300024262	Deep Subsurface	MILELTSEELGWVKYALIRASATLQGRDKDMTLKEERKLLKIVNKIEKQEK
Ga0208920_10245314	3300025072	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTRKEEKLLMRLVRKIEKQEEENLK
Ga0209349_10165888	3300025112	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKLLMRLVRKIEKQEEEYLK
Ga0209434_10947493	3300025122	Marine	MMIELTSDEIGWVKYALTRAASTMEGRDLDMTRKEEKLLMRLVRKIEKQEEENLK
Ga0209434_11536724	3300025122	Marine	MKLELTSDEIGWVKYALIRSSATLNGRDKEMTLKEER
Ga0209644_11115053	3300025125	Marine	MKLELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEK
Ga0209644_11481452	3300025125	Marine	MKIELTPDEIGWLKYALTRAASTLEGRDPDLTRREENRLLRLARKIEKQEKEYLK
Ga0208299_100423822	3300025133	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKILMRLVRKIEKQEEENLK
Ga0209756_12247611	3300025141	Marine	MKLELTSDEIGWVKYALIRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0207893_10678062	3300025241	Deep Ocean	MILELTNDEIGWVKYSLIRASAERDKEMTLKEERLLLRIVRKIERQEKQRGKG
Ga0208179_10082354	3300025267	Deep Ocean	MKVELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEKQRG
Ga0207894_10101651	3300025268	Deep Ocean	ELTREEISWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0209757_100562045	3300025873	Marine	MKLELTSEEIGWVKYALIRASATLQGKDKEMTLKEERLLGRIARKIEEQEKRRG
Ga0209757_101784801	3300025873	Marine	PHTRMKLELTSEEIGWVKYALIRASATLHGRDKEMTLKEERLLGRIVRKIEEQEK
Ga0208451_10016668	3300026103	Marine Oceanic	MILELTSDEIGWLKYALIRASDEAAEYEKAQATPNGRDKDMTLKEERLLLRIVRKIERQEKQRGKG
Ga0208128_10186748	3300026186	Marine	EIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0208406_10294722	3300026205	Marine	MKLELTSEEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0208896_11172392	3300026259	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPAMTRKEEKLLMRLVRKIEKQEEENLK
Ga0208408_10746945	3300026260	Marine	MMIELASDEIGWVKYALTRAASTMEGRDPDMTLKEEKLLMRLVRKIEKQEEE
Ga0207992_101193812	3300026263	Marine	RMILELTSEEIGWVKYALMRSSATLNGRDKEMTLKEERLLERIVKKIEKQEK
Ga0209091_1000227239	3300027801	Marine	MILELTSEELGWVKYALIRASASLEGRDKDMTLKEERKLLRIANKIEKQEK
Ga0209089_104023272	3300027838	Marine	MGQPHTEMKLELTSDEIGWVKYALIRASATLNGRDTEITLKEERLLGRIVRKIEQQEMDL
Ga0209402_103848481	3300027847	Marine	MKLELTSDEIGWVKYALIRASATLNGRDTEITLKEERLLGRIVRKIEQQEMDL
Ga0308021_101228165	3300031141	Marine	MILELTNDEIGWVKYALIRASATLNGRDTEMTLKEERLLGRIVKKIEKQE
Ga0302132_102094402	3300031605	Marine	MGQPHTEMKLELTSDEIGWVKYALIRASATINGRDTEITLKEERLLGRIVRKIEQQEK
Ga0302118_101297571	3300031627	Marine	RMILELTSEELGWVKYALIRASASLEGRDKDMTLKEERKLLRIANKIEKQEK
Ga0302118_105141382	3300031627	Marine	MGQPHTEMKLELTSDEIGWLKYALIRASATLNGRDTEITLKEERLLGRIV
Ga0308018_102149641	3300031655	Marine	MILELTNDEIGWVKYALIRASATLNGRDTEMTLKEERLLGRI
Ga0315328_102009764	3300031757	Seawater	MMIKLTPDEIGWIKYALARAASTMEGRDPDMTRKEEKLLMRLARKIEKQEEENLK
Ga0315326_100951385	3300031775	Seawater	MIIDLTPDEIGWVKYALARAASTMQGRDPDMTHKEEKLLMRLARKIEKQEEEYLK
Ga0310122_1001757710	3300031800	Marine	MGQPHTEMKLELTSDEIGWVKYALIRASATLNGRDKDMTLKEERLLLRIVRKIEQQEMDL
Ga0315319_104580971	3300031861	Seawater	MKLELTSDEIGWVKYALIRSSATLNGRDKEMTLKEERKLLRIVRKIEEQEK
Ga0315319_105894521	3300031861	Seawater	MMIELTSDEIGWIKYALTRAASTLEGRDPALTRKEENLLLRIGRA
Ga0315318_103006072	3300031886	Seawater	MKLELTSNEIGWIKYSLIRASASIKGRDKDMTLKEERLLGRIVRKIEEQEKQ
Ga0315318_104659133	3300031886	Seawater	MKIELTSEEIGWVKYALIRASATLQGRDKEMTLKEERLLARIVRKIEEQEKQ
Ga0315316_100295242	3300032011	Seawater	MILELTSEEIGWVKYALIRSSATLNGRDKDMTLKEERKLLRIVQKIEEQEK
Ga0315329_103491413	3300032048	Seawater	MKLELTSDEIGWVKYALIRSSATLNGRDKEMTLKEERKLLRIVRKIEKQEK
Ga0315336_12999293	3300032132	Seawater	ALIRASATLQGRDKEMTLKEERLLARIVRKIEEQEKQ
Ga0310345_118456372	3300032278	Seawater	MMIKLTPDEIGWIKYALARAASTMEGRDPDMTRKEEKLLMRLARKIEKPEEENLK
Ga0315334_107164581	3300032360	Seawater	MKIELTSNEIGWVKYALIRASATLQGRDKDMTLKEERLLGRIVRKIEEQEKQ
Ga0315334_108500721	3300032360	Seawater	MGQSRPRMKLELTSEEIGWVKYSLIRASATLQGRDKEMTLKEERLLGRIVRKIEEQEKK
Ga0315334_110829613	3300032360	Seawater	MKIELTPDEIGWVKYAVTRAASTLEGRDPDLTRREENQLLCIARKIEKQEQEYLK
Ga0315334_115785113	3300032360	Seawater	MKLELTSNEIGWIKYSLIRASASIKGRDKDMTLKEERLLG
Ga0315334_117713272	3300032360	Seawater	MILELTSEEIGWVKYSLIRASASLKGRDKDMTLKEERKLLRIVKKIEEQEK
Ga0310342_1035841582	3300032820	Seawater	MKIELTSEEIGWVKYALIRASATLQGRDKEMTLKEERLLARIVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters