Metagenome / Metatranscriptome Family F066193

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066193
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	82 residues
Representative Sequence	YDAATGRRLGDILVREGAYRQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS
Number of Associated Samples	105
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.57 %
% of genes near scaffold ends (potentially truncated)	96.06 %
% of genes from short scaffolds (< 2000 bps)	90.55 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.213 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.472 % of family members)
Environment Ontology (ENVO)	Unclassified (42.520 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.606 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.56% β-sheet: 0.00% Coil/Unstructured: 50.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13649	Methyltransf_25	4.72
PF12732	YtxH	4.72
PF10672	Methyltrans_SAM	3.94
PF01018	GTP1_OBG	3.94
PF01636	APH	2.36
PF01926	MMR_HSR1	1.57
PF02470	MlaD	1.57
PF09656	PGPGW	1.57
PF00011	HSP20	1.57
PF14060	DUF4252	1.57
PF02410	RsfS	0.79
PF00196	GerE	0.79
PF03544	TonB_C	0.79
PF00561	Abhydrolase_1	0.79
PF05598	DUF772	0.79
PF14022	DUF4238	0.79
PF02472	ExbD	0.79
PF12704	MacB_PCD	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0536	GTPase involved in cell partioning and DNA repair	Replication, recombination and repair [L]	3.94
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	0.79
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.36 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	72.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.36 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.44 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.36 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.44 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.36 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.44 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	2.36 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.57 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.44 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	2.36 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.57 %
Unclassified	root	N/A	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01CH8IM	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
2170459024\|GZRSKLJ01DGWN6	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104463601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104636921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300000955\|JGI1027J12803_109387039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300004153\|Ga0063455_101170207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300004479\|Ga0062595_100407480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300004479\|Ga0062595_100507953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300004479\|Ga0062595_100708678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300005171\|Ga0066677_10288235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300005175\|Ga0066673_10253541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300005179\|Ga0066684_10868809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005186\|Ga0066676_10294089	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005187\|Ga0066675_10298424	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300005329\|Ga0070683_101962820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005338\|Ga0068868_100773204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300005365\|Ga0070688_100154063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1573	Open in IMG/M
3300005435\|Ga0070714_100071497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3000	Open in IMG/M
3300005436\|Ga0070713_101798203	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005437\|Ga0070710_10920585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300005459\|Ga0068867_100119441	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300005530\|Ga0070679_102127126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005542\|Ga0070732_10335376	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005542\|Ga0070732_10391802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300005552\|Ga0066701_10896226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005557\|Ga0066704_10392677	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005564\|Ga0070664_100399079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1257	Open in IMG/M
3300005614\|Ga0068856_102629775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005616\|Ga0068852_101636841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300005764\|Ga0066903_103852439	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300006028\|Ga0070717_10075806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2814	Open in IMG/M
3300006163\|Ga0070715_10229005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300006175\|Ga0070712_100821062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300006175\|Ga0070712_101150970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300006755\|Ga0079222_10960622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300006804\|Ga0079221_10972101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	633	Open in IMG/M
3300006806\|Ga0079220_10821200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300006954\|Ga0079219_11153532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300006954\|Ga0079219_11157440	Not Available	664	Open in IMG/M
3300009089\|Ga0099828_10072775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2915	Open in IMG/M
3300009090\|Ga0099827_10241337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300009090\|Ga0099827_10544954	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300009137\|Ga0066709_102402387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300009162\|Ga0075423_10957447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300009177\|Ga0105248_11355340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300009545\|Ga0105237_11067281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300009551\|Ga0105238_10288034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624	Open in IMG/M
3300010048\|Ga0126373_10069383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3179	Open in IMG/M
3300010048\|Ga0126373_10237643	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300010048\|Ga0126373_12287530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010358\|Ga0126370_10307499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1260	Open in IMG/M
3300010358\|Ga0126370_12232037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300010359\|Ga0126376_12874297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010360\|Ga0126372_10145208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1885	Open in IMG/M
3300010362\|Ga0126377_11396692	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300010373\|Ga0134128_11039356	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300010373\|Ga0134128_11747955	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300010375\|Ga0105239_11007580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300010376\|Ga0126381_100795560	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300010376\|Ga0126381_103197939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300010397\|Ga0134124_12044543	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300010399\|Ga0134127_10926303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300011269\|Ga0137392_10917449	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012189\|Ga0137388_10235913	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300012189\|Ga0137388_11943148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012198\|Ga0137364_11028580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300012211\|Ga0137377_10489044	All Organisms → cellular organisms → Bacteria → Acidobacteria	1169	Open in IMG/M
3300012285\|Ga0137370_10890502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012349\|Ga0137387_10157912	All Organisms → cellular organisms → Bacteria → Acidobacteria	1617	Open in IMG/M
3300012349\|Ga0137387_10900179	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012351\|Ga0137386_10389140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	1004	Open in IMG/M
3300012355\|Ga0137369_11096990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012356\|Ga0137371_10070815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2700	Open in IMG/M
3300012356\|Ga0137371_10416957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	1040	Open in IMG/M
3300012361\|Ga0137360_10106282	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2158	Open in IMG/M
3300012362\|Ga0137361_10745029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300012363\|Ga0137390_10002552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14514	Open in IMG/M
3300012363\|Ga0137390_10061961	All Organisms → cellular organisms → Bacteria	3648	Open in IMG/M
3300012363\|Ga0137390_10181874	All Organisms → cellular organisms → Bacteria → Acidobacteria	2089	Open in IMG/M
3300012363\|Ga0137390_11005076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300012532\|Ga0137373_11181821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012917\|Ga0137395_10509811	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300012951\|Ga0164300_10725374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300012958\|Ga0164299_11041526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300012971\|Ga0126369_10849878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300012971\|Ga0126369_11915373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012987\|Ga0164307_11042012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300013296\|Ga0157374_12362693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300013308\|Ga0157375_13404215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300013770\|Ga0120123_1125353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300014150\|Ga0134081_10150112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300014157\|Ga0134078_10038314	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300014745\|Ga0157377_10512459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300015356\|Ga0134073_10181994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300015357\|Ga0134072_10500359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300020069\|Ga0197907_10217519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300020076\|Ga0206355_1297400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300020080\|Ga0206350_10067617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300020081\|Ga0206354_10058447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300020580\|Ga0210403_10492011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300021362\|Ga0213882_10265388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300021388\|Ga0213875_10311726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300022467\|Ga0224712_10349144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300022467\|Ga0224712_10451225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300025915\|Ga0207693_10672370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300025927\|Ga0207687_10230331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1463	Open in IMG/M
3300025929\|Ga0207664_10052070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3236	Open in IMG/M
3300025929\|Ga0207664_10370982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300025934\|Ga0207686_10454967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300026023\|Ga0207677_10168419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1710	Open in IMG/M
3300026023\|Ga0207677_10693341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300026078\|Ga0207702_11686791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300026308\|Ga0209265_1225913	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026316\|Ga0209155_1259997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300026330\|Ga0209473_1003974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7947	Open in IMG/M
3300026547\|Ga0209156_10228115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300027645\|Ga0209117_1130260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300027787\|Ga0209074_10276783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300027875\|Ga0209283_10292110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300027882\|Ga0209590_10672445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300027903\|Ga0209488_10904110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300031231\|Ga0170824_122896887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300031474\|Ga0170818_110164059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031718\|Ga0307474_11332829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031719\|Ga0306917_11339236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300031996\|Ga0308176_10437521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300033475\|Ga0310811_10573500	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.04%
Host-Associated	Host-Associated	14.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.04%
Plants	Host-Associated → Plants	14.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.51%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.29%
Loam	Environmental → Terrestrial → Soil → Loam	14.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.51%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.51%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_2172870	2040502001	Soil	VFLGFTNADGNATRRIYDAATGRRLGDILVREGAYRQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGK
FD1_08038810	2170459024	Grass Soil	DAATGRRLGETLIREGGYRQAFPEDITDAIRLNGNWGNAEQDGWEGELPSSVLDLLQRDLDLARAERAAHHEKTHAGAPSSVAS
INPhiseqgaiiFebDRAFT_1044636012	3300000364	Soil	RKLGDTLVREGGYRQAFPEDLTETVRLNGTWGEAEQEEWGGELPSHVLDLLQRDLDLARAEAAAHHHKEPVSA*
INPhiseqgaiiFebDRAFT_1046369211	3300000364	Soil	QAFPEDLNDAIRLNGTWTDAEQEDWGDELPTHVLDVLQRDLDLARAEMTAHHAKETAQPSTVAS*
JGI1027J12803_1093870392	3300000955	Soil	EDLNDAIRLNGTWTDAEQEDWGDELPTHVLDVLQRDLDLARAEMTAHHAKETAQPSTVAS
Ga0063455_1011702071	3300004153	Soil	RKLGDTLMREGGYRQAFPEDLNDSIRLNGNWSDDEQDEWGDELPTRILDILQRDLMLARAEAAAHHEKAAQAPSSVAS*
Ga0062595_1004074801	3300004479	Soil	NADGGSSRRIYDFATGRRVGDILMRDGAYRQAFPEDINDTIRLNGTWTDTEQDEWGDELPTRVLDLLQRDLDLARAEMAAHHAKEAPQPSTVAS*
Ga0062595_1005079533	3300004479	Soil	DTLVREGAYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS*
Ga0062595_1007086782	3300004479	Soil	RIYDAATGRRLGDILVREGAYRQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS*
Ga0066677_102882352	3300005171	Soil	VFLSFSNSGGSATRRIYDAASGRKLGDTLMREGGYRQAFPEDLNDSIRLNGHWSDDDQDEWGDELPTRILDILQRDLMLARAEAAAHHEKAAQAPSSVAS*
Ga0066673_102535411	3300005175	Soil	EVFLAFTNTAGNSNRRIYDAASGRRLGDILTREGGYRQAFPEDLNDSIRLNGNWSEAEVDEWGDELPSSVLDLLQRDLRLARVDAASHHDKHAVSTHSGVAS*
Ga0066684_108688091	3300005179	Soil	GEVFLSFSNSAGSATRRVYDAASGRKLGDTVIREGAYRQAFPEDLADTIRLNGNWSDAEQDDWLDELPTAVLDSLQRDLALARAEAASHHKKETVGTPSSVAS*
Ga0066676_102940891	3300005186	Soil	QAFPEDLNDSIRLNGNWSDDEQDEWGDELPTRILDILQRDLMLARAEAAAHHEKHSAEAPSSVAS*
Ga0066675_102984244	3300005187	Soil	GYRQAFPEDLNDSIRLNGNWSEAEVDEWGDELPSSVLDLLQRDLRLARVDAASHHDKHAVSTHSGVAS*
Ga0070683_1019628201	3300005329	Corn Rhizosphere	EDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS*
Ga0068868_1007732042	3300005338	Miscanthus Rhizosphere	DAMAVRRVYDAATGRRLGDLLAREGAYRQAFPEEITDAIRLNGNWTDDEQDAWEDELPSSVLDALQRDLDLARAERAAHHEPSPTSVAS*
Ga0070688_1001540632	3300005365	Switchgrass Rhizosphere	RRVYDAATGRRLGDPLVREGAYRQAFPEDITDAIRLNGNWSDAEQDEWDNELPSSVLDALQRDLDLARAERAVHHESAPTSVAS*
Ga0070714_1000714971	3300005435	Agricultural Soil	PEDITDAIRLNGNWGNAEQDQWEGELPSSVLDLLQRDLDLARAERAAHHEKTHAGTPSSVAS*
Ga0070713_1017982031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	YRQAFPEDITDAIRLNGNWTDAEQDEWENELPSSVLDHLQRDLDLAKAERAAHHEATHTSVAS*
Ga0070710_109205851	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VFLAFTNSDGNATRRIYDAATGRRLGDILTREGAYRQAFPEDLKETIRLNGNWSESEVDEWGDELPSSVLDLLQRDLQLARNEAAHHSKHAVSAPSSVAS*
Ga0068867_1001194412	3300005459	Miscanthus Rhizosphere	NDGEVFLSFSNTDGMAVRRVYDAATGRRLGDLLAREGAYRQAFPEDITDAIRLNGNWTDSEQDTWENELPSSVLDALQRDLDLARAERAGHHEPAPTSVAS*
Ga0070679_1021271262	3300005530	Corn Rhizosphere	FLNFSNTGGLAARHVYDAATGRKLGDTLVREGGYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDLLQRDLQLARVEIAAHHGKDAAHAPSSVAS*
Ga0070732_103353762	3300005542	Surface Soil	RKLGDTLVREAAYRQAFPEDLNDSIRLNGNWGESELDDWGDELPSSVLDALQRDLQLARAEAASHHGKHAVSAPSSVAS*
Ga0070732_103918021	3300005542	Surface Soil	DGNSSRRIYDAATGRKLGDTLVREAAYRQAFPEDLNDSIRLNGNWGESELDEWGDELPSSVLDALQRDLQLARAEAASHHGKHAVSTPSSVAS*
Ga0066701_108962261	3300005552	Soil	SNTEGSAHRRVYDAATGRKLGETLVREGGYRQAFPEDLTETVRLNGNWGEAELDGWGDELPSYALDLLQRDLDLARAEAASHRHKEPVSA*
Ga0066704_103926772	3300005557	Soil	YRQAFPEDLAETIRLNGNWSEAELDEWGAELPSFALDLLQRDLDLARAEAAAHHQKESVSA*
Ga0070664_1003990794	3300005564	Corn Rhizosphere	DAATGRKIGDTLVREGAYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS*
Ga0068856_1026297751	3300005614	Corn Rhizosphere	DAATGRRIGDPLVREGAYRQAFPEDITDAIRLNGNWTDAEQDEWENELPSSVLDHLQRDLDLAKAERATHHESAPTSVAS*
Ga0068852_1016368411	3300005616	Corn Rhizosphere	RHVYDAATGRKIGDTLVREGAYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS*
Ga0066903_1038524391	3300005764	Tropical Forest Soil	YGGDGEVFLSFANSEGASTRRIYDAATGRKLGDTLVREGAYRQAFPEDIHDAIRLNGNWNDAEQDEWGDELPSSVLDTLQRDLDLARAEMAAHHAKEAVPSTVAS*
Ga0070717_100758065	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LSFSNSDGMASRRVYDAATGRRLGDVLAREGAYRQAFPEDITDAIRLNGNWTDAEQDEWENELPSSVLDQLQRDLDLAKAERAAHHEATQTSVAS*
Ga0070715_102290054	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	YDAATGRRLGDILVREGAYRQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS*
Ga0070712_1008210621	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ATRRIYDAASGRRLGETLIREGGYRQAFPEDITDAIRLNGNWGNSEQDEWEGELPSSVLDLLQRDLDLARAERAAHHEKTHAGAPSTVAS*
Ga0070712_1011509702	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TLIREGGYRQAFPEDLNDSIRLNGHWSDADQDEWGDELPSAVLDALQRDLDLARLEASRPHKEAAHAPSTVAS*
Ga0079222_109606221	3300006755	Agricultural Soil	NFSNTDGMATRHVYDAATGRKIGDTLVREGAYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS*
Ga0079221_109721011	3300006804	Agricultural Soil	GEVFLSFSNTEGSAHRRVYDAATGRKLGETLVREGGYRQAFPEDLTETVRLNGTWGEAELDGWGDELPSFVLDLLQRDLDLARAEAAAHRHKEPVSA*
Ga0079220_108212003	3300006806	Agricultural Soil	TRHVYDAATGRKIGDTLVREGAYRQGFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS*
Ga0079219_111535322	3300006954	Agricultural Soil	GNATRRIYDAATGRRLGDILVREGTYRQAFPEDLNDTIRLNGNWSESEVDDWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS*
Ga0079219_111574402	3300006954	Agricultural Soil	EGAYRQAFPEDITEAIRLNGNWTDAEQDEWENELPSSVLDHLQRDLDLAKAERATHHESAPTSVAS*
Ga0099828_100727755	3300009089	Vadose Zone Soil	GETFVREGGYRQAFPEDLAETIRLNGNWSEAELDEWGTELPSFALDLLQRDLDLARAEAAAHHQKESVSA*
Ga0099827_102413372	3300009090	Vadose Zone Soil	EGSAHRRVYDAASGRKLGETLVREGGYRQAFPEDLAETIRLNGNWSEAELDEWGTELPSFALDLLQRDLDLARAEAAAHHQKESVSA*
Ga0099827_105449542	3300009090	Vadose Zone Soil	ASGRRLGDILVRDGGYRQAFPEDLSDTIRLNGNWSETELDEWGDELPSFVLDLLQRDLDLARAEAASHRHKEPVSA*
Ga0066709_1024023871	3300009137	Grasslands Soil	YRQAFPEDLTEATRLNGNWTNADQDEWGDELPTHVLDVLQRDLDLARAEAAAHHAKEPVSA*
Ga0075423_109574471	3300009162	Populus Rhizosphere	RLGDILIRDGAYRQAFPEDLNDAIRLNGTWTDAEQEDWGDELPTHVLDVLQRDLDLARAEMTAHHAKETAQPSTVAS*
Ga0105248_113553402	3300009177	Switchgrass Rhizosphere	FSNSDAMAVRRVYDAATGRRLGDLLAREGAYRQAFPEEITDAIRLNGNWTDDEQDAWEDELPSSVLDALQRDLDLARAERAAHHEPSPTSVAS*
Ga0105237_110672811	3300009545	Corn Rhizosphere	DGMAVRRVYDAATGRRLGDLLAREGAYRQAFPEDITDAIRLNGNWTDSEQDTWENELPSSVLDALQRDLDLARAERAGHHEPAPTSVAS*
Ga0105238_102880344	3300009551	Corn Rhizosphere	RRIGDPLVREGAYRQAFPEDITDAIRLNGNWTDAEQDEWENELPSSVLDHLQRDLDLAKAERATHHESAPTSVAS*
Ga0126373_100693835	3300010048	Tropical Forest Soil	GEVFLSFANWEGTATRRIYDAATGRKLGDTLVREGAYREAFPEDIHDAIRLNGNWNDAEQDEWGDELPSSVLDTLQRDLDLARAEMAAHHAKEAVPSTVAS*
Ga0126373_102376431	3300010048	Tropical Forest Soil	YRQAFPEDIHDAIRLNGSWSDAEQDEWGDELPSSVLDILQRDLDLARAEMIAHHAKPAVPSTVAS*
Ga0126373_122875301	3300010048	Tropical Forest Soil	EGSYRQAFPEDLNDAIRLNGNWSEAELDEWGDELPSTVLDALQRDLHLARTEASHQHAVSAPSSVAS*
Ga0126370_103074991	3300010358	Tropical Forest Soil	GGYRQAFPEDLTDAIRLNGAWTDVEQDGWEDELPTHVLDVLQRDLDLARAEMTAHHAKEAVQPSTVAS*
Ga0126370_122320372	3300010358	Tropical Forest Soil	ILVREGSYRQAFPEDLNDATRLNGNWSEAELDEWGDELPSMVLDALQRDLHLARAETGHLHAVSAPSSVAS*
Ga0126376_128742971	3300010359	Tropical Forest Soil	FPEDLNDAIRLNGTWTDAEQDEWGDELPTHVLDVLQRDLDLARAEMSAHHAKEPVQPSTVAS*
Ga0126372_101452081	3300010360	Tropical Forest Soil	EVFLAFSDSSGAASRRIYDFATGRRLGDILLRDGAYRQAFPEDLNDSIRLNGTWTDSDQDEWGDELPTHVLDLLQRDLDLARAEMATHHPKEAAQPSTVAS*
Ga0126377_113966922	3300010362	Tropical Forest Soil	LRRLGDILMRDGAYRQAFPEDLADTIRLNGTWTDTEQDEWGDELPTHVLDVLQRDLDLARAEMTAHHAKEAVQPSTVAS*
Ga0134128_110393562	3300010373	Terrestrial Soil	ETLIREGAYRQAFPEDLNDSVRLNGHWSDDEQDEWGDELPSSVLDALQRDLDLARVEAERHHHKEAAHAPSPVAS*
Ga0134128_117479551	3300010373	Terrestrial Soil	GAYRQAFPEDITDAIRLNGNWGSDEQDEWQGELPSSVLDLLQRDLDLAKAERAARHEPAHTSVAS*
Ga0105239_110075801	3300010375	Corn Rhizosphere	EGAYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDAAHAPSSVAS*
Ga0126381_1007955602	3300010376	Tropical Forest Soil	YRQAFPEDIHDAIRLNGNWSDGEQDEWDDELPSSVLDTLQRDLDLARAEMAGHHEKDAMPSTVAS*
Ga0126381_1031979392	3300010376	Tropical Forest Soil	EEYGSDGEVLKSFSNTASTAERRIYDAATGRRLGDIVVREGTYRQAFPEDLTNTIRLNGSWNEAEQDEWGDELPSAVLDVLHRDLDLARTEMADHHRKESVPASPSLAS*
Ga0134124_120445432	3300010397	Terrestrial Soil	VREGAYRQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS*
Ga0134127_109263032	3300010399	Terrestrial Soil	EGGYRQAFPEDLNDSTRLNGHWSDDEQDEWGNELPSAVLDALQRDLDLARAEAASRPHKEAAHAPSTVAS*
Ga0137392_109174492	3300011269	Vadose Zone Soil	AASGRKLGETLVREGGYRQAFAEDLTETVRLNGNWGEAELDGWGDELPSYVLDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137388_102359133	3300012189	Vadose Zone Soil	ESGEVFLSFSNTEGSAHRRVYDAATGRKLGETLVREGGYRQAFPEDLTETVRLNGNWGEAELDGWGDELPSYVLDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137388_119431482	3300012189	Vadose Zone Soil	FVREGGYRQAFPEDLTETVRLNGNWGEAELDEWAGELPSYVLDLLQRDLDLARAEAAARHQKEPVSA*
Ga0137364_110285801	3300012198	Vadose Zone Soil	EGGYRQAFPEDLNDSIRLNGNWSDDEQDEWGDELPTRILDILQRDLMLARAEAAAHHEKHSAEAPSSVAS*
Ga0137377_104890441	3300012211	Vadose Zone Soil	RQAFPEDLSDTIRLNGNWGESELDDWGDELPSFVLDALQRDLDLARAEAASHRHKEPVGSRSTVAS*
Ga0137370_108905021	3300012285	Vadose Zone Soil	AASGRKLGNTLIGEGGYRQAFPEDLNDSIRLSGDWSDGEEDEWGDELPTRILDILQRDLMLARAEAAAHHEKHSAEAPSSVAS*
Ga0137387_101579121	3300012349	Vadose Zone Soil	RQAFPEDIPETVRLNGTWGEAELDEWAGELPSYVLDLLQRDLDLARAEAAAHRHKEPFSA
Ga0137387_109001791	3300012349	Vadose Zone Soil	RLRDILVRDGGYRQAFPEDLSDTIRLNGNWSETELDEWGDELPSFVLDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137386_103891402	3300012351	Vadose Zone Soil	GDILVREGGYRQGFPEDLSDAIRLNGNWSESELDDWGDELPSFVLDALQRDLDLARAEAAAHHAKESVSA*
Ga0137369_110969902	3300012355	Vadose Zone Soil	GSAHRRVYDAASGRRLGDILVRDGGYRQAFPEDLTDTIRLNGNWGEAELDEWGDELPSFVLDALQRDLDLARAEAASHRHKEPVSA*
Ga0137371_100708155	3300012356	Vadose Zone Soil	DTLMRESAYQQAFPEDLADTNRLHGNWNESELEEWGNELPSFVLDALQRDLDLARAEAAAHQQKDSVASPSTVAKGCCKTQGSTA*
Ga0137371_104169573	3300012356	Vadose Zone Soil	EGGYRQVFPEDLSDTIRLNGNWSESELDDWGDELPSFVLDALQRDLDLARAEAAAHHAKESVSA*
Ga0137360_101062823	3300012361	Vadose Zone Soil	GEYGESGEVFLSFSNTDGSAHRRVYDAASGRKLGETLVREGGYRQAFPEDLTETVRLNGNWSEAELDGWGDELPSFALDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137361_107450291	3300012362	Vadose Zone Soil	FLSFSNTAGSAHRRVYDAASGRRLGDILVRDGGYRQAFPEDLSDTIRLNGNWGESELDDWGDELPSFVLDALQRDLDLARAEAASHRHKEPVGSRSTVAS*
Ga0137390_100025521	3300012363	Vadose Zone Soil	NAGSAHRRVYDAASGRRLGDILVRDGGYRQAFPEDLSDPIRLNGNWSEAELDGWGDELPSFALDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137390_100619611	3300012363	Vadose Zone Soil	VFLSFSNTEGSAHRRVYDAATGRKLGETLVREGGYRQAFPEDLTETVRLNGNWGEAELDGWGDELPSYVLDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137390_101818741	3300012363	Vadose Zone Soil	FVREGGYRQAFPEDLTDTVRLNGNWSEAELDEWGGELPSFALDLLQRDLDLARAEAAAHHQKDSVASPSTVAS*
Ga0137390_110050761	3300012363	Vadose Zone Soil	NTEGSAHRRVYDAATGRKLGETLVREGGYRQAFPEDLTETVRLNGNWGEAELDGWGDELPSFALDLLQRDLDLARAEAASHRHKEPVSA*
Ga0137373_111818211	3300012532	Vadose Zone Soil	SNTGGSASRRVYDAASGRRLGDVLVREGAYRQAFPEDLTEATRLNGNWTDADQDEWGDELPTHVLDVLQRDLDLARAEAAAHHQKESVSA*
Ga0137395_105098112	3300012917	Vadose Zone Soil	GYRQAFPEDLSDTIRLNGNWGESELDDWGDELPSFVLDALQRDLDLARAEAASHRHKEPVGSRSTVAS*
Ga0164300_107253742	3300012951	Soil	EGAYRQAFPEDITDAIRLNGNWGNAEQDEWEGELPSSVLDLLQRDLDLARAERAAHHEKTHAGSPSTVAS*
Ga0164299_110415261	3300012958	Soil	GEVFLSFANSDGNASRRVYDAATGRKLGETLIREGAYHQAFPEDITDAIRLNGNWGNAEQDEWEGELPSSVLDLLQRDLDLARAERAARHEKEHAGAPSSVAS*
Ga0126369_108498781	3300012971	Tropical Forest Soil	RKLGDTLVREGAYRQAFPEDIQDAIRLNGSWSDAEQDEWGDELPSSVLDILQRDLDLARAEMVAHHAKPAVPSTVAS*
Ga0126369_119153731	3300012971	Tropical Forest Soil	GSYRQAFPEDLNDAIRLNGNWSEADLDEWGDELPSTVLDALQRDLHLARAETGHLHAVSAPSSVAS*
Ga0164307_110420122	3300012987	Soil	AYSNADGGSSRRIYDFATGRRVGDILMRDGAYRQAFPEDINDTIRLNGTWTDTEQDEWGDELPTRVLDLLQRDLDLARAEMAAHHAKEAPQPSTVAS*
Ga0157374_123626931	3300013296	Miscanthus Rhizosphere	YRQAFPEDINDTIRLNGTWTDTEQDEWGDELPTRVLDLLQRDLDLARAEMAAHHAKEAPQPSTVAS*
Ga0157375_134042151	3300013308	Miscanthus Rhizosphere	LSFSNTDGMAVRRVYDAATGRRLGDLLAREGAYRQAFPEDITDAIRLNGNWTDSEQDTWENELPSSVLDALQRDLDLARAERAGHHEPAPTSVAS*
Ga0120123_11253531	3300013770	Permafrost	ALGERELEHVALAGTEGSAHRRVYDAATGRKLGETLVREGGYRQAFPEDLTETVRLNGNWGEAELDGWGDELPSYVLDLLQRDLDLARAEAASHRHKEPVSA*
Ga0134081_101501122	3300014150	Grasslands Soil	GGYRQAFPEDLNDSIRLNGHWSDDDQDEWGDELPTRILDILQRDLMLARAEAAAHHEKAAQAPSSVAS*
Ga0134078_100383142	3300014157	Grasslands Soil	FPEDLNDSIRLNGHWSDDDQDEWGDELPTRILDILQRDLMLARAEAAAHHEKAAQAPSSVAS*
Ga0157377_105124592	3300014745	Miscanthus Rhizosphere	VFLSFANIEGMASRRVYDAATGRRLGDPLVREGAYRQAFPEDITDAIRLNGNWSDAEQDEWDNELPSSVLDALQRDLDLARAERAVHHESAPTSVAS*
Ga0134073_101819941	3300015356	Grasslands Soil	VTRWADLSSGVTTKLLANRRIYDAASGRRLGDILTREGGYRQAFPEDLNDSIRLNGNWSEAELEEWGDELPSFVLDLLQRDLDLARAEAA
Ga0134072_105003591	3300015357	Grasslands Soil	TRRIYDAASGRKLGDTLMREGGYRQAFPEDLNDSIRLNGHWSDDDQDEWGDELPTRILDILQRDLMLARAEAAAHHEKAAQAPSSVAS*
Ga0197907_102175191	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	RVYDFATGRKLGDTLVREGHYRQAFPEDLNDAVRLNGNWTDAEQDEWADELPSSVLDSLQRDLDLARAEVAHHEHEHTSAPSSVAS
Ga0206355_12974002	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	GEVFLSFENSEGSATRRVYDFATGRKLGDTLVREGHYRQAFPEDLNDAVRLNGNWTDAEQDEWADELPSSVLDSLQRDLDLARAEVAHHEHEHTSAPSSVAS
Ga0206350_100676172	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	VYDFATGRKLGETLVREGHYRQAFPEDLNDAVRLNGNWTDAEQDEWADELPSSVLDSLQRDLDLARAEVAHHEHEHTSAPSSVAS
Ga0206354_100584471	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	RKLGDTLVREGHYRQAFPEDLNDAVRLNGNWTDAEQDEWADELPSSVLDSLQRDLDLARAEVAHHEHEHTSAPSSVAS
Ga0210403_104920112	3300020580	Soil	SGEVFLSFVNASGAAARRIFDAASGRKLGETLIREGAYRQAFPEDLNDTIRLNGNWSDAEQDEWGEELPSSVLDALQRDLDLARAEAASHHHKETASAPSTVAS
Ga0213882_102653882	3300021362	Exposed Rock	PEDLDPSIRLNGSWSAADQDEWSDELPSAVLDLLHRDLDLARAELAEPGAKQSLPASPSLAS
Ga0213875_103117261	3300021388	Plant Roots	SRRIYDAATGRKLGDTLVREGGYRQAFPEDLTNAIRLNGSWSDSEQDEWEGELPSTVLDVLHRDLDLARAEMAVRERQEQAAPSTVAS
Ga0224712_103491442	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	ATRRVYDFATGRKLGDTLVREGHYRQAFPEDLNDAVRLNGNWTDAEQDEWADELPSSVLDSLQRDLDLARAEVAHHEHEHTSAPSSVAS
Ga0224712_104512252	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	AFPEDLNDAVRLNGNWTDAEQDEWADELPSSVLDSLQRDLDLARAEVAHHEHEHASAPSSVAS
Ga0207693_106723701	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PEDISDAIRLNGNWGNSEQDEWEGELPSSVLDLLQRDLDLARAERAAHHEKTHAGAPSTVAS
Ga0207687_102303312	3300025927	Miscanthus Rhizosphere	LGDPLVREGAYRQAFPEDITDAIRLNGNWSDAEQDEWDNELPSSVLDALQRDLDLARAERAVHHESAPTSVAS
Ga0207664_100520701	3300025929	Agricultural Soil	ILVREGAYRQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS
Ga0207664_103709821	3300025929	Agricultural Soil	ILVREGAYRQAFPVDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS
Ga0207686_104549672	3300025934	Miscanthus Rhizosphere	MASRRVYDAATGRRLGDPLVREGAYRQAFPEDITDAIRLNGNWSDAEQDEWDNELPSSVLDALQRDLDLARAERAVHHESAPTSVAS
Ga0207677_101684192	3300026023	Miscanthus Rhizosphere	NDGEVFLSFSNTDGMAVRRVYDAATGRRLGDLLAREGAYRQAFPEDITDAIRLNGNWTDSEQDTWENELPSSVLDALQRDLDLARAERAGHHEPAPTSVAS
Ga0207677_106933411	3300026023	Miscanthus Rhizosphere	DAMAVRRVYDAATGRRLGDLLAREGAYRQAFPEEITDAIRLNGNWTDDEQDAWEDELPSSVLDALQRDLDLARAERAAHHEPSPTSVAS
Ga0207702_116867912	3300026078	Corn Rhizosphere	MASRRVYDAATGRRIGDPLVREGAYRQAFPEDITDAIRLNGNWTDAEQDEWENELPSSVLDHLQRDLDLAKAERATHHESAPTSVAS
Ga0209265_12259131	3300026308	Soil	EDLNDSIRLNGNWSEAEVDEWGDELPSSVLDLLQRDLRLARVDAASHHDKHAVSTHSGVA
Ga0209155_12599972	3300026316	Soil	HGEVFLAFTNTAGNSNRRIYDAASGRRLGDILTREGGYRQAFPEDLNDSIRLNGNWSEAEVDEWGDELPSSVLDLLQRDLRLARVDAASHHDKHAVSTHSGVAS
Ga0209473_10039741	3300026330	Soil	GEVFLSFVNASGAAARRIFDAASGRKLGDTLLREGGYRQAFPEDIQESIRLNGNWSDAEQEEWGDELPSSVLDALQRDLDLARAEAASHHHKEAAHAPSTVAS
Ga0209156_102281152	3300026547	Soil	TVIREGAYRQAFPEDLAETIRLNGNWSDAEQDDWLDELPTAVLDSLQRDLALARAEAASHHKKETVGTPSSVGS
Ga0209117_11302601	3300027645	Forest Soil	YDAATGRKLGETFVREGGYRQAFPEDLTETVRLNGNWGEAELDEWAGELPSYVLDLLQRDLDLARAEAASRYTKEAQPSSVA
Ga0209074_102767832	3300027787	Agricultural Soil	SNTDGMATRHVYDAATGRKIGDTLVREGAYRQAFPEDITDAIRLNGNWSDDEVEEWGEELPSAVLDILQRDLQLARVEMAAHHGKDATHAPSSVAS
Ga0209283_102921102	3300027875	Vadose Zone Soil	GETFVREGGYRQAFPEDLAETIRLNGNWSEAELDEWGTELPSFALDLLQRDLDLARAEAAAHHQKESVSA
Ga0209590_106724452	3300027882	Vadose Zone Soil	VYDAATGRKLGETFVREGGYRQAFPEDLAETIRLNGNWSEAELDEWGTELPSFALDLLQRDLDLARAEAAAHHQKESVSA
Ga0209488_109041101	3300027903	Vadose Zone Soil	ATGRRLGDILVREGAYRQAFPEDLNDTIRLNGHWSEAELDEWGDELPSFVLDALQRDLDLARAEAAAHHAKEQVSA
Ga0170824_1228968871	3300031231	Forest Soil	GDTLIREGGYRQAFPEDLNDSIRLNGHWSDAEQDEWGDELPSSVLDALQRDLDLARTEAASRPHKEAAHAPSTVAS
Ga0170818_1101640591	3300031474	Forest Soil	VFLSFSNTAGSAHRRVYDAATGRKLGETFVREGGYRQAFPEDLTETVRLNGTWGEAELDEWAGELPSYVLDLLQRDLDLARAEAAAHRHKEPVSA
Ga0307474_113328292	3300031718	Hardwood Forest Soil	GRKLGDTLIREGGYRQAFPEDLADSIRLNGHWSDAEQDEWGDELPSSVLDALQRDLDLARTEAASRPHKEAAHAPSTVAS
Ga0306917_113392361	3300031719	Soil	GDIVVREGAYRQAFPEDLTSSIRLNGSWDEAEQDEWGDELPSTVLDVLHRDLDLARAEMAGHHTKESVPTSPSLAS
Ga0308176_104375211	3300031996	Soil	YDAASGRKLGDTLMREGGYRQAFPEDLNDSIRLNGNWSDDEQDEWGDELPTRILDILQRDLMLARAEAAAHHEKAAQAPSSVAS
Ga0310811_105735002	3300033475	Soil	RQAFPEDLNDTIRLNGNWSESEVDEWGDELPSSVLDALQRDLQLARAEAAAHHGKHAVSAPSSVAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066193

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences