Metagenome Family F066160

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066160
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	62 residues
Representative Sequence	WTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEY
Number of Associated Samples	93
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.00 %
% of genes near scaffold ends (potentially truncated)	88.98 %
% of genes from short scaffolds (< 2000 bps)	87.40 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.063 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.047 % of family members)
Environment Ontology (ENVO)	Unclassified (35.433 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.118 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.19% β-sheet: 34.07% Coil/Unstructured: 52.75%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00732	GMC_oxred_N	24.41
PF00106	adh_short	19.69
PF03466	LysR_substrate	3.94
PF05199	GMC_oxred_C	3.15
PF05368	NmrA	2.36
PF11799	IMS_C	1.57
PF00171	Aldedh	1.57
PF00817	IMS	0.79
PF12833	HTH_18	0.79
PF02894	GFO_IDH_MocA_C	0.79
PF12704	MacB_PCD	0.79
PF14534	DUF4440	0.79
PF00004	AAA	0.79
PF13460	NAD_binding_10	0.79
PF00248	Aldo_ket_red	0.79
PF02142	MGS	0.79
PF03060	NMO	0.79
PF13847	Methyltransf_31	0.79
PF13561	adh_short_C2	0.79
PF14690	zf-ISL3	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	27.56
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.57
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.57
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.57
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.79
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.79
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.79
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.06 %
Unclassified	root	N/A	3.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.30 %
Unclassified	root	N/A	3.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.57 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.72 %
Unclassified	root	N/A	3.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.51 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.72 %
Unclassified	root	N/A	3.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.51 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.72 %
Unclassified	root	N/A	3.94 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.62 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.72 %
Unclassified	root	N/A	3.94 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.57 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.57 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.79 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.62 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.72 %
Unclassified	root	N/A	3.94 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1.57 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	1.57 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.79 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11793714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300001661\|JGI12053J15887_10209474	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300004633\|Ga0066395_10032973	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300005332\|Ga0066388_101455007	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300005332\|Ga0066388_101528973	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005332\|Ga0066388_101877554	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300005332\|Ga0066388_102722653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	902	Open in IMG/M
3300005332\|Ga0066388_105479603	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005332\|Ga0066388_106525042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005332\|Ga0066388_106539898	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005434\|Ga0070709_10440698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	980	Open in IMG/M
3300005445\|Ga0070708_100575280	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300006028\|Ga0070717_10870341	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006163\|Ga0070715_11078148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	505	Open in IMG/M
3300006854\|Ga0075425_100864660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1035	Open in IMG/M
3300007076\|Ga0075435_100314326	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300009088\|Ga0099830_11335831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300009100\|Ga0075418_12631966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300009162\|Ga0075423_12098124	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009792\|Ga0126374_10463647	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009792\|Ga0126374_10493422	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300010046\|Ga0126384_11534649	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300010048\|Ga0126373_10007989	All Organisms → cellular organisms → Bacteria	8374	Open in IMG/M
3300010048\|Ga0126373_11667853	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300010358\|Ga0126370_11629920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300010358\|Ga0126370_12313345	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300010359\|Ga0126376_11105225	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300010359\|Ga0126376_11459633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	711	Open in IMG/M
3300010360\|Ga0126372_10922134	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300010360\|Ga0126372_12032185	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010361\|Ga0126378_11770665	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010361\|Ga0126378_12006717	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300010376\|Ga0126381_104351644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300010397\|Ga0134124_11896690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	631	Open in IMG/M
3300010398\|Ga0126383_11755619	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010398\|Ga0126383_11851041	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012203\|Ga0137399_11574634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012357\|Ga0137384_10594754	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300012361\|Ga0137360_11781905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012363\|Ga0137390_10684757	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300012918\|Ga0137396_11014248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300012925\|Ga0137419_10611328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300012925\|Ga0137419_10987187	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012925\|Ga0137419_11617010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012927\|Ga0137416_10811227	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300012927\|Ga0137416_11074064	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012960\|Ga0164301_10243459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	1176	Open in IMG/M
3300012971\|Ga0126369_10089945	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300012971\|Ga0126369_10269357	All Organisms → cellular organisms → Bacteria → Acidobacteria	1687	Open in IMG/M
3300013297\|Ga0157378_12264182	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300013306\|Ga0163162_12482904	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300015054\|Ga0137420_1090173	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300015242\|Ga0137412_10244274	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422	Open in IMG/M
3300015372\|Ga0132256_100883821	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300016270\|Ga0182036_10982642	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300016270\|Ga0182036_11324696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300016270\|Ga0182036_11491330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300016294\|Ga0182041_11463387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300016341\|Ga0182035_11635506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300016357\|Ga0182032_10141805	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300016371\|Ga0182034_10093150	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300016371\|Ga0182034_11193104	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300016404\|Ga0182037_11024194	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300016404\|Ga0182037_11332462	Not Available	633	Open in IMG/M
3300016404\|Ga0182037_11619463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	576	Open in IMG/M
3300016422\|Ga0182039_11022283	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300016422\|Ga0182039_11873019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300016445\|Ga0182038_12054678	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300020170\|Ga0179594_10019479	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300020579\|Ga0210407_10058471	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300020583\|Ga0210401_10073428	All Organisms → cellular organisms → Bacteria	3221	Open in IMG/M
3300021433\|Ga0210391_10740610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300021475\|Ga0210392_11157720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300021478\|Ga0210402_10043795	All Organisms → cellular organisms → Bacteria	3898	Open in IMG/M
3300021559\|Ga0210409_10377103	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300021560\|Ga0126371_10806817	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300021560\|Ga0126371_13870358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300024330\|Ga0137417_1151609	All Organisms → cellular organisms → Bacteria → Proteobacteria	2943	Open in IMG/M
3300025906\|Ga0207699_11347612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300025910\|Ga0207684_10528740	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300025929\|Ga0207664_11434015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300026285\|Ga0209438_1110469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	806	Open in IMG/M
3300026285\|Ga0209438_1175888	Not Available	564	Open in IMG/M
3300026309\|Ga0209055_1262976	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300026341\|Ga0257151_1005123	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300026469\|Ga0257169_1029145	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300026557\|Ga0179587_11128133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300028047\|Ga0209526_10553488	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031446\|Ga0170820_17724118	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031545\|Ga0318541_10265342	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300031668\|Ga0318542_10398959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	710	Open in IMG/M
3300031681\|Ga0318572_10468102	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031682\|Ga0318560_10035976	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300031682\|Ga0318560_10390832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300031719\|Ga0306917_10741691	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031723\|Ga0318493_10640538	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031736\|Ga0318501_10675855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300031751\|Ga0318494_10518060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300031770\|Ga0318521_10462013	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031795\|Ga0318557_10353965	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031820\|Ga0307473_10685501	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031823\|Ga0307478_10116972	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300031879\|Ga0306919_11213278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031893\|Ga0318536_10300691	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300031894\|Ga0318522_10205486	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031896\|Ga0318551_10781563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031910\|Ga0306923_12011553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	586	Open in IMG/M
3300031912\|Ga0306921_10398681	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300031941\|Ga0310912_10467503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300031941\|Ga0310912_11050759	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031942\|Ga0310916_10850642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	766	Open in IMG/M
3300031954\|Ga0306926_10138883	Not Available	3007	Open in IMG/M
3300031954\|Ga0306926_10782005	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031954\|Ga0306926_12485700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300031962\|Ga0307479_10345231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1471	Open in IMG/M
3300031981\|Ga0318531_10200519	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300031981\|Ga0318531_10303891	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300032066\|Ga0318514_10332856	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300032076\|Ga0306924_10401312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1570	Open in IMG/M
3300032076\|Ga0306924_10686105	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300032174\|Ga0307470_10000995	All Organisms → cellular organisms → Bacteria	11736	Open in IMG/M
3300032174\|Ga0307470_10390383	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300032180\|Ga0307471_100153085	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300032261\|Ga0306920_102097593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	789	Open in IMG/M
3300032261\|Ga0306920_102517943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.49%
Host-Associated	Host-Associated	5.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.49%
Plants	Host-Associated → Plants	5.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.10%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_117937143	3300000789	Soil	STLTEPFYGGLSRKVPVSVHGVSVARIENGKIIDWTNYYDGLTWRRTALAAHFKEWIEL*
JGI12053J15887_102094742	3300001661	Forest Soil	EHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTTLAAHFTEWVEY*
Ga0066395_100329731	3300004633	Tropical Forest Soil	LTEPFYGGQSRKLPIVLKGASIARTANGKITDWTDYYDGLTSRRTALAAHFEEWVEL*
Ga0066388_1014550072	3300005332	Tropical Forest Soil	VTIKEPFYTGLTTTIPISIAGVSIVRTDNGKITDWTDYYDGLTSRRTALAAHFTEWIEY*
Ga0066388_1015289731	3300005332	Tropical Forest Soil	VSGEHVITEWTLRFTLTEPFYGGLSRRVPIELHGVSIVQTTNGKITGWTDYYDGLTSRRTALAAHFEEWVEL*
Ga0066388_1018775542	3300005332	Tropical Forest Soil	TEPFYGGLSRKVHVSVHGASIIRTENGKITEWADYYDGLTSRRTALAAHFKEWVEL*
Ga0066388_1027226532	3300005332	Tropical Forest Soil	TLTEPFFGGLKRTVKVSVQGVSIVRIENGNIAEWADYYDGLTSRRTALGAHFEEWVEL*
Ga0066388_1054796032	3300005332	Tropical Forest Soil	LQVTLTEPFFGGLTRSIPISIAGVSILRTENGKITEWADYYDGLTARRTALATHFTEWIEY*
Ga0066388_1065250422	3300005332	Tropical Forest Soil	ITAQWVLHTVVTQPFFGGSYKIPISLHGASVVTTRKGKITDWADYYDGMKSRRNALAAHFEEWVEL*
Ga0066388_1065398982	3300005332	Tropical Forest Soil	YGGVFRKIRVLVRGASVVRTENGKIVDWAEYYDGLTSRRTGLAAHFEEWVEL*
Ga0070709_104406982	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QTFVSGEHVITQWTLQVTISEPFYAGLTRRIPILIAGVSIVRTNNDGKIADWADYYDGLTSRRTALAAHFTEWVEY*
Ga0070708_1005752801	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TIFLSGDHLITEWTLQTVVTEPFYGQLTRQVRVSLPGISIVRTESGLITDWADYYDGLTSRRTALASHFTEWREL*
Ga0070717_108703413	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TEWTLQTVVTEPFYGQLTRQVRVSLPGISIVRTESGLITDWADYYDGLTSRRTALASHFTEWREL*
Ga0070715_110781482	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LQVTITEPFYAGLTRRIPISIAGVSIARTDNGKIADWADYYDGLTARRSALAAHFTEWVEY*
Ga0075425_1008646602	3300006854	Populus Rhizosphere	VITQWTLQVTITETFYAGLTGRIPISIAGVSIVRTDNGTIADWADYYDGLTSRRTALAAHFTEWVEY*
Ga0075435_1003143263	3300007076	Populus Rhizosphere	HVIIEWTLRNTLTEPFYGGLKRKVPIELHGASVVRTANGKITGWTDYYDGLASRRTSLAAHFEEWVEL*
Ga0099830_113358311	3300009088	Vadose Zone Soil	SGEHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTARRTALAAHFTEWVEY*
Ga0075418_126319661	3300009100	Populus Rhizosphere	PFYGGLKRKVKISLHGASIVRTENGKITDWADYYDRLTSRRTALAAHFEEWAEL*
Ga0075423_120981242	3300009162	Populus Rhizosphere	QVTITQPFYAGLTGRIPISIAGVSIVRTDNGTIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0126374_104636471	3300009792	Tropical Forest Soil	TILTKPFYGGLKWRVPVSLHGASIVRTENGKITDWAEYYDGLIARRTTLASYLTQLVEL*
Ga0126374_104934221	3300009792	Tropical Forest Soil	LTEPFFGGLKRTVKVSVQGVSIVRIENSNIAEWADYYDRLTSRRTALGAHFEEWVEL*
Ga0126384_115346491	3300010046	Tropical Forest Soil	VTEPFYGGLKRTVKVSVQGVSIVRIENGNIAEWADYYDGLTSRRTALGAHFEEWVEL*
Ga0126373_100079892	3300010048	Tropical Forest Soil	LIEPFFGGISRKVPISLRGVSIVRTDSGKIVDWTDYYDGLTSRRTALAAHFEEWVEL*
Ga0126373_116678532	3300010048	Tropical Forest Soil	MDLQFTLTEPFYGGLKRNLKASVHGVSIVRIENGSISEWADYYDGLTSRRTALGAHFEEWVEL*
Ga0126370_116299202	3300010358	Tropical Forest Soil	YGGLSRKASVVLHGASIVRTENGRIIEWTNYYDGLTARRTSLAAYFEDWVEL*
Ga0126370_123133451	3300010358	Tropical Forest Soil	GEHVITEWTLRFTLTEPFYGGQSRKLPIVLKGASIVRAANGKITDWTDYYDGLTSRRNALGAHFEEWVEL*
Ga0126376_111052251	3300010359	Tropical Forest Soil	VIMEWTLQTTLSEPFYGGVFRKIRVLVRGASVVRTENGKIVDWAEYYNGLTSRRTGLAAHFEEWVEL*
Ga0126376_114596332	3300010359	Tropical Forest Soil	HVAISEPFYCGLTRTIPISIAGISVVRTEDGKITDWADYYDGLTSRRTALAAQFTKWIEY
Ga0126376_124192671	3300010359	Tropical Forest Soil	KRTVKVSVQGVSIVRIENGNIAEWADYYDGLTSRRTALGAHFEEWVEL*
Ga0126372_109221341	3300010360	Tropical Forest Soil	EPYLGGLSRTVPISLQGVSIVRTDNGKITEWVDYYDGLTSRRTRLASYFSEWIEY*
Ga0126372_120321851	3300010360	Tropical Forest Soil	WTLNATLTEPFYDALKRKVKISLQGASIVRTENGKMTDWADYYDGLSSRRTALAAHFEEGVKL*
Ga0126378_117706652	3300010361	Tropical Forest Soil	VLETNSIVLSGDHVITEWTLQTILMEPLYGGLRWRVPVSLHGASIVRTANGKITDWAEYYDGLTARRTALACYFTEWIEL*
Ga0126378_120067171	3300010361	Tropical Forest Soil	RFTLTEPFFGGLKRNLKVSVQGVSIVRIESGNIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0126381_1043516442	3300010376	Tropical Forest Soil	LKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL*
Ga0134124_118966901	3300010397	Terrestrial Soil	VIGDDVITQWTLYATLTEPFYGRLTRKIPISIAGVSIVHTDKGQITDWADYYDGLTSRRTVLAAYFTEWIEY*
Ga0126383_117556191	3300010398	Tropical Forest Soil	EPFYGGLKRTVKVSVHGASIVRIEGGKIADWADYYDGLTSRRTALAAHFEEWVEL*
Ga0126383_118510412	3300010398	Tropical Forest Soil	LNATLTEPFFGGLKRNVTISLHGASIVRTENGKITDWADYYDGLTSRRNVLAAHFEEWVEL*
Ga0137399_115746341	3300012203	Vadose Zone Soil	GLLRRVPVSVHGTSIVRIDDGKITDWADYYDGLTSRRTAQASHFTEWVEL*
Ga0137384_105947543	3300012357	Vadose Zone Soil	LVSAIAFYAGLTRKIPISIAGVSSVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEY*
Ga0137360_117819051	3300012361	Vadose Zone Soil	GEHVITQWTLQVTITEPFYAGLTRRIPISITGVSIVRTDNGRIADWADYYDGLTSRRTALAAHFTEWIEY*
Ga0137390_106847571	3300012363	Vadose Zone Soil	MQWTLQVTITEPFYAGLTRRIPISIAGVSIVRSDNGKIADWADYYDGLTARRTALAAHSTEWVEY*
Ga0137396_110142481	3300012918	Vadose Zone Soil	EHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDSGKIADWADYYDGLTSRRTALAAHFTEWVEY*
Ga0137419_106113282	3300012925	Vadose Zone Soil	EHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTARRTALAAHFTEWVEY*
Ga0137419_109871872	3300012925	Vadose Zone Soil	FYAGLIRRIPISIAGVSIVRTDNGKIADWADYYDGVSSRRTALAAHFTEWIEY*
Ga0137419_116170101	3300012925	Vadose Zone Soil	EHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEY*
Ga0137416_108112271	3300012927	Vadose Zone Soil	WTLQVTITEPFYAGLTRRIPISITGVSIVRTDNGKIADWADYYDGLTARRTALAAHFTEWVEY*
Ga0137416_110740642	3300012927	Vadose Zone Soil	VITQWTLQVTITEPFYAGLTRRIPISITGVSIVRTDNGRIADWADYYDGLTSRRTALAAHFTEWIEY*
Ga0164301_102434591	3300012960	Soil	VTITEPFYAGLTRRIPISIAGVSIVRTDNGKIAHWADYYDGWTSRRTALAAHFTEWVEY*
Ga0126369_100899451	3300012971	Tropical Forest Soil	TLRATLVEPFYGGLSRKVPISLRGASIVRTENGKIVDWADYYDGLTSRRTALAAHFEEWVEL*
Ga0126369_102693572	3300012971	Tropical Forest Soil	MAWTLHTLVTESFDGGRSRKVHVSVHGASIVRTEHGKITEWADYYDGLTARRTALAAHCKAWVER*
Ga0157378_122641821	3300013297	Miscanthus Rhizosphere	ISEPFYAGFTRRTPISIAGVSVVRTDKGMIADWVDYYDGLTSRRTALAAHFTEWVEY*
Ga0163162_124829042	3300013306	Switchgrass Rhizosphere	SEPFYAGLTRRIPISIAGASVVRTDNGKIADWADYYDGLTARRTALGAHFTEWVEY*
Ga0137420_10901732	3300015054	Vadose Zone Soil	TLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTTLAAHFTEWVEY*
Ga0137412_102442742	3300015242	Vadose Zone Soil	MQPVSHHELDTILFSGDQVIMEWTRQTILMEPFYGGLKWRIPVTLHGASIVRTENGKITDWAEYYDGLTARRTALASCFTEWIEL*
Ga0132256_1008838211	3300015372	Arabidopsis Rhizosphere	LFVIDDYVIIQWTLQVTIAEPFYAGLTRTIPIAIAGASIVRTDNGKITDWTDYYDGLTSRRTALAAHFTEWIEY*
Ga0182036_109826422	3300016270	Soil	YGGLKRTVKVSVHGASIVRIEHDKIADWADYYDGLTSRRTALGSYFTEWIEL
Ga0182036_113246962	3300016270	Soil	YGGLKRTVKVSVHGASIVRIEHDKIADWADYYDGLTSRRTALAAHFEEWVEL
Ga0182036_114913301	3300016270	Soil	LRFTLTEPFYGGLKRTVKVSVQGVSIVRVENRNIAEWADYYDGLTSRRTALAAHFEEWVE
Ga0182041_114633872	3300016294	Soil	WTLRFTLTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0182035_116355061	3300016341	Soil	TEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0182032_101418052	3300016357	Soil	LTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0182034_100931502	3300016371	Soil	LVVITEWTLRTILTEPTGPFYGGFTWRFPVSLLGASIVRIENGRITDWTDYYDGLTSRRTALASHFTEWIEL
Ga0182034_111931042	3300016371	Soil	LVEPFYGGLSRKVPISLHGASIVRTENGKITDWSAYYDGLTSRRTALAAHFEEWVEL
Ga0182037_110241942	3300016404	Soil	VVEWTLRAALVEPFYGGLSRKVPISLHGASIVQTENGKITDWTDYYDGLTSRRTALAAHFEEWVEL
Ga0182037_113324622	3300016404	Soil	PLYAGLTRRMPISISGVVRTAAGKITDWDDYYDGLTSRRPALAAYFTEWIEC
Ga0182037_116194632	3300016404	Soil	TLTEPFYGGLKRTVKVSVQGVSIVRIESGKIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0182039_110222831	3300016422	Soil	EPFFGGLKRNLKVSVQGGSIVRVENGNIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0182039_118730191	3300016422	Soil	GLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWIEL
Ga0182038_120546781	3300016445	Soil	LGGLSRTVPISLQGVSIVRTANGKIAYWADYYDGLTSRRTRLAAYFTEWIEY
Ga0179594_100194791	3300020170	Vadose Zone Soil	YAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGFTSRRTALAAHFTEWVEY
Ga0210407_100584715	3300020579	Soil	DQTFVSGEHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGTIVDWADYYDGLTSRRTALAAHFTERVEY
Ga0210401_100734283	3300020583	Soil	VITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRADNGKIADWADYYDGLTARRNALGAHFTEWVEY
Ga0210391_107406102	3300021433	Soil	TLTEPFYGPHSRKLRVLLRGASIVRTANGKITNWADYYDGLTSRRTALASYFADWVEL
Ga0210392_111577201	3300021475	Soil	SEWTLQFTLTEPFYGPHSRKLRVLLRGASIVRTANGKITNWADYYDGLTSRRTALASYFADWVEL
Ga0210402_100437951	3300021478	Soil	TFVSGEHVITQWTLQVTITEPFYAGLTRRIPISITGVSLVRTDNGKIADWADYYDGLISRRTALAAHFTEWVEY
Ga0210409_103771032	3300021559	Soil	VSDEHVITQWTLQVTISEPFYAGLTRRIPISIAGVSIVRADNGKIADWADYYDGLTARRNALGAHFTEWVEY
Ga0126371_108068171	3300021560	Tropical Forest Soil	TEPTGPFYGGFTWRFPVSLHGTSIVRVENGRITDWTDYYDGLTSRRTALAFYFTEWIEL
Ga0126371_138703581	3300021560	Tropical Forest Soil	STLTEPFYGGLSRKVPIVLHGASILRIAKGKITDWTDYYDGSTSRRSALAAYFEEWVEL
Ga0137417_11516091	3300024330	Vadose Zone Soil	RLLSAVRPDVRERHQTFVSGEHVITQWTLQVTITEPFYAGLTRRIPISIPGISIVRTDNGIIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0207699_113476122	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QTFVSGEHVITQWTLQVTISEPFYAGLTRRIPILIAGVSIVRANNDGKIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0207684_105287401	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LQVTITEPFYTGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTARRTALGAHFTEWVE
Ga0207664_114340152	3300025929	Agricultural Soil	FVNGGEHVITQWTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0209438_11104692	3300026285	Grasslands Soil	WTLQVTITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0209438_11758882	3300026285	Grasslands Soil	TTEPFYAGRTRRVPISFAGASIVWIRDGKIADWADYYDGLTSRRTALAAHFEEWGEL
Ga0209055_12629761	3300026309	Soil	GLTRRIPISIAGVSIVRTDKGRIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0257151_10051231	3300026341	Soil	TITEPFYAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTARRTALAAHFTEWVEY
Ga0257169_10291452	3300026469	Soil	PFCAGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEN
Ga0179587_111281332	3300026557	Vadose Zone Soil	VITEWILQLTTTEPFYAGRTRRVPISFAGASIVWIRDGKIADWADYYDGLTSRRTALAAHFEEWGEL
Ga0209526_105534882	3300028047	Forest Soil	GEHVITQWTLQVTITEPFYAGLIRRIPISIAGVSIVRTDNGTIVDWADYYDGLTSRRTALAAHFTEWIEY
Ga0170820_177241181	3300031446	Forest Soil	TLQVTITEPFYAGLTRRIPIWIAGVSIVRTDNGTIADWADYYDGLTSRRTDLAAHFAEWVEY
Ga0318541_102653421	3300031545	Soil	EWTLRFTLTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0318542_103989591	3300031668	Soil	FYGGLKRTGKVSVHGASIVRIEHGKIADWADYYDGLTSRRTALAAHFEEWVEL
Ga0318572_104681021	3300031681	Soil	FYGGLSRKVPISLHGASIVRTENGKITDWTDYYDGLTSRRTALAAHFEEWVEL
Ga0318560_100359761	3300031682	Soil	RVVVEWTLRAALVEPFYGGLSRKVPISLHGASIVRTENGKIRDWTDYYDGLTSRRTALAAHFEEWVEL
Ga0318560_103908322	3300031682	Soil	GGNRVIAEWTLRFTLTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0306917_107416912	3300031719	Soil	EPFFGGLKRNLKVSVQGVSIVQVENGNIAGWADYYDGLTSRRTALAAHFEEWVDL
Ga0318493_106405381	3300031723	Soil	VEWTLRAALVEPFYGGLSRKVPISLHGASIVRTENGKITDWTDYYDGLTSRRTALAAHFEEWVEL
Ga0318501_106758551	3300031736	Soil	FTLTEPFYGGLKRTVKVSVHGASIVRIEHGKIADWADYYDGLTSRRTALGSYFTEWIEL
Ga0318494_105180602	3300031751	Soil	LKRTEKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0318521_104620131	3300031770	Soil	YGGLKRTLKVSVQGVSIVRIENGNIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0318557_103539652	3300031795	Soil	GNRVITEWTLRFTLTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0318565_101592041	3300031799	Soil	KRTEKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWVEL
Ga0307473_106855012	3300031820	Hardwood Forest Soil	QVTITEPFYTGLTRRIPISIAGVSIVRTDNGKIADWADYYDGLTARRTALGAHFTEWVEY
Ga0307478_101169721	3300031823	Hardwood Forest Soil	PFYAGLTGRIPISIAGVSVVRTDKGMIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0306919_112132782	3300031879	Soil	VSGKDVIIQWTFQARVDEPCYAGLTRRMPVSISAVSIVRTVAGTIVDWDDYYDGLTARRTALAAHFTEWIEY
Ga0318536_103006912	3300031893	Soil	TEWTLRFTLTEPFFGGLKRNLKVSVQGASIVQIENSNIVEWADYYDGLTSRRTALGAHFEEWVEL
Ga0318522_102054861	3300031894	Soil	VITEWTLRFTLTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRIALAAHFEEWVEL
Ga0318551_107815631	3300031896	Soil	RVITEWTLQFTLTEPFYGGLKRTVKVSVHGASIVRIEHGKIADWADYYDGLTSRRTALGSYFTEWIEL
Ga0306923_120115532	3300031910	Soil	FFGGLKRTVKVSVQGVSIVRIESGKIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0306921_103986812	3300031912	Soil	VEWTLRATLTEGFFGGLSRKVPISLKGVSIVRMDEGKITDGADYYDGLISRRTRLASYFA
Ga0310912_104675032	3300031941	Soil	VRTEQTFLSGEDVIIQWTAQVTVSEPLYAGLIRRMPLSISGVSIARTAAGKITDWDDYYDGLISRRTALAAYFTEWIEC
Ga0310912_110507591	3300031941	Soil	GLKRTVKVSVHGASIVRIEHGKIADWADYYDGLTSRRTALGSYFTEWIEL
Ga0310916_108506422	3300031942	Soil	LQFTLTEPFYGGLKRTVKVSVHGASIVRIEHGKIAVWADYYDGLTSRRTALGSHFTEWIE
Ga0306926_101388833	3300031954	Soil	NDVIVEWTLRATLTEGFFGGLSRKVPISLKGVSIVRMDEGKITDGADYYDGLISRRTRLASYFAE
Ga0306926_107820051	3300031954	Soil	LTEPFFGGLKRTVKVSVQGVSIVRIENGKIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0306926_124857001	3300031954	Soil	EWTLRFTLTEPFYGGLKRTVKVSVQGVSIVRIENRNIAEWADYYDGLTSRRTALAAHFEEWIEL
Ga0307479_103452311	3300031962	Hardwood Forest Soil	LITEWTLQTVVTEPFYGQLTRQVRVSLPGISIVRTESGLITDWADYYDGLTSRRTALASHFTEWREL
Ga0318531_102005192	3300031981	Soil	PKRTVRVSVQGVSIVRIENGKIAEWADYYDGLTSRRTALGAHFEEWVEL
Ga0318531_103038912	3300031981	Soil	EWTLRFTLTEPFFGGLKRNLKVSVQGASIVQIENSNIVEWADYYDGLTSRRTALGAHFEEWVEL
Ga0318514_103328562	3300032066	Soil	TEPFYGGLKRTVKVSVHGASIVRIEHGKIADWADYYDGLTSRRTALGSYFTEWIEL
Ga0306924_104013122	3300032076	Soil	IIQWTAQVTVSEPLYAGLIRRMPLSISGVSIARTAAGKITDWDDYYDGLISRRTALAAYFTEWIEC
Ga0306924_106861052	3300032076	Soil	SVLVVITEWTLRTILTEPTGPFYGGFTWRFPVSLLGASIVRIENGRITDWTDYYDGLTSRRTALASHFTEWIEL
Ga0307470_100009952	3300032174	Hardwood Forest Soil	VSGEHVITQWTLQVTITEPFYAGLTRSIPISIAGVSIVRTDNGKIAHWADYYEGLTARRTALGAHFTE
Ga0307470_103903831	3300032174	Hardwood Forest Soil	QWTLQVTITEPFYAGLTRRIPISITGVSIVRTDNGKIADWADYYDGLTSRRTALAAHFTEWVEY
Ga0307471_1001530851	3300032180	Hardwood Forest Soil	ITKWTLQVTITEPFYAGLIRRIPISIAGVSIVRTDNGKIADWADYYDGVSSRRTALAAHFTEWIEY
Ga0306920_1020975932	3300032261	Soil	NRVITEWTLQFTLTEPFYGGLKRTVKVSVHGASIVRIEHDKIADWADYYDELTSRRTALAAHFEEWVEL
Ga0306920_1025179432	3300032261	Soil	GLKRTVKVSVHGASIVRIEHGKIADWADYYDGLTSRRTALGSYFTEWMEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066160

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences