Metagenome / Metatranscriptome Family F066122

Basic Information
Family ID	F066122
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	75 residues
Representative Sequence	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDVQMEGSLIASITEHLHAAHERGVELA
Number of Associated Samples	105
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.06 %
% of genes near scaffold ends (potentially truncated)	96.85 %
% of genes from short scaffolds (< 2000 bps)	94.49 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Most Common Taxonomy
Group	Bacteria (76.378 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (8.661 % of family members)
Environment Ontology (ENVO)	Unclassified (48.819 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.992 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.87% β-sheet: 0.00% Coil/Unstructured: 29.13%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00072	Response_reg	53.54
PF01979	Amidohydro_1	7.87
PF00722	Glyco_hydro_16	5.51
PF13174	TPR_6	2.36
PF08148	DSHCT	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	5.51
COG4581	Superfamily II RNA helicase	Replication, recombination and repair [L]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.38 %
Unclassified	root	N/A	23.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.38 %
Unclassified	root	N/A	23.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.38 %
Unclassified	root	N/A	23.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.52 %
Unclassified	root	N/A	23.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.62 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.36 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.57 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.36 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.57 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.62 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.57 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.57 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.62 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.57 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	1.57 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.62 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.57 %
Komagataeibacter medellinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter medellinensis	1.57 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12052685	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300000890\|JGI11643J12802_12178531	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300000891\|JGI10214J12806_10863311	Not Available	569	Open in IMG/M
3300002568\|C688J35102_118764923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter medellinensis	594	Open in IMG/M
3300003203\|JGI25406J46586_10036559	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300003267\|soilL1_10038624	All Organisms → cellular organisms → Bacteria → Proteobacteria	2982	Open in IMG/M
3300003267\|soilL1_10046639	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300003319\|soilL2_10001885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2713	Open in IMG/M
3300003319\|soilL2_10010345	All Organisms → cellular organisms → Bacteria	3930	Open in IMG/M
3300003319\|soilL2_10020686	All Organisms → cellular organisms → Bacteria → Acidobacteria	3746	Open in IMG/M
3300003321\|soilH1_10016613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1505	Open in IMG/M
3300004463\|Ga0063356_105515959	Not Available	543	Open in IMG/M
3300004480\|Ga0062592_101137581	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300005289\|Ga0065704_10753438	Not Available	541	Open in IMG/M
3300005332\|Ga0066388_104086185	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300005332\|Ga0066388_104091592	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005333\|Ga0070677_10541350	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005334\|Ga0068869_101861843	Not Available	539	Open in IMG/M
3300005338\|Ga0068868_100830668	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300005339\|Ga0070660_101086244	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005341\|Ga0070691_10587551	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005343\|Ga0070687_100394122	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300005343\|Ga0070687_100867324	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300005345\|Ga0070692_10465565	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300005347\|Ga0070668_101324896	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300005355\|Ga0070671_101327786	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300005364\|Ga0070673_100834179	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300005364\|Ga0070673_101818656	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300005365\|Ga0070688_101212093	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300005457\|Ga0070662_101481415	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300005459\|Ga0068867_102196935	Not Available	524	Open in IMG/M
3300005539\|Ga0068853_100026035	All Organisms → cellular organisms → Bacteria	4910	Open in IMG/M
3300005543\|Ga0070672_100549346	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300005545\|Ga0070695_100505100	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300005563\|Ga0068855_100653856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1129	Open in IMG/M
3300005563\|Ga0068855_100938674	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300005563\|Ga0068855_102396077	Not Available	527	Open in IMG/M
3300005577\|Ga0068857_101461136	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005615\|Ga0070702_100666178	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300005616\|Ga0068852_100763053	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300005617\|Ga0068859_100662229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300005834\|Ga0068851_10669559	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005842\|Ga0068858_102034909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter medellinensis	568	Open in IMG/M
3300005843\|Ga0068860_100912554	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005875\|Ga0075293_1061465	Not Available	552	Open in IMG/M
3300006058\|Ga0075432_10528453	Not Available	530	Open in IMG/M
3300006169\|Ga0082029_1003960	Not Available	597	Open in IMG/M
3300006169\|Ga0082029_1795246	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300006358\|Ga0068871_101979377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	554	Open in IMG/M
3300006806\|Ga0079220_10801389	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300006852\|Ga0075433_11935005	Not Available	506	Open in IMG/M
3300006894\|Ga0079215_10721096	Not Available	679	Open in IMG/M
3300006904\|Ga0075424_101643944	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300006914\|Ga0075436_100252476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300006969\|Ga0075419_11004486	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300007004\|Ga0079218_11607356	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300009036\|Ga0105244_10449819	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300009093\|Ga0105240_12795047	Not Available	502	Open in IMG/M
3300009098\|Ga0105245_11247287	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300009100\|Ga0075418_10854963	All Organisms → cellular organisms → Bacteria → Proteobacteria	983	Open in IMG/M
3300009100\|Ga0075418_10991891	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300009101\|Ga0105247_10844886	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300009147\|Ga0114129_11658518	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300009148\|Ga0105243_10518116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1133	Open in IMG/M
3300009157\|Ga0105092_10701833	Not Available	588	Open in IMG/M
3300009162\|Ga0075423_11507390	Not Available	721	Open in IMG/M
3300009176\|Ga0105242_11823301	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300009177\|Ga0105248_12983344	Not Available	539	Open in IMG/M
3300010044\|Ga0126310_10177099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1382	Open in IMG/M
3300010045\|Ga0126311_10415583	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300010146\|Ga0126320_1069679	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300010373\|Ga0134128_12025818	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300010373\|Ga0134128_13131238	Not Available	508	Open in IMG/M
3300010397\|Ga0134124_10644771	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1042	Open in IMG/M
3300010397\|Ga0134124_10800592	All Organisms → cellular organisms → Bacteria → Acidobacteria	942	Open in IMG/M
3300010399\|Ga0134127_11246930	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010400\|Ga0134122_12610601	Not Available	556	Open in IMG/M
3300012285\|Ga0137370_10560495	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300012285\|Ga0137370_10775898	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300012899\|Ga0157299_10175718	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300012913\|Ga0157298_10219676	Not Available	623	Open in IMG/M
3300012922\|Ga0137394_10134711	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300012948\|Ga0126375_11353657	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012948\|Ga0126375_11892099	Not Available	524	Open in IMG/M
3300012958\|Ga0164299_11323264	Not Available	552	Open in IMG/M
3300012989\|Ga0164305_10811904	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300013100\|Ga0157373_10822059	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300013297\|Ga0157378_10960297	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300013297\|Ga0157378_12625146	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300013297\|Ga0157378_13086168	Not Available	517	Open in IMG/M
3300013307\|Ga0157372_11175896	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300013308\|Ga0157375_10775905	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300014325\|Ga0163163_10610587	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300014745\|Ga0157377_11689178	Not Available	510	Open in IMG/M
3300015372\|Ga0132256_101782109	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300015372\|Ga0132256_102338954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	637	Open in IMG/M
3300018466\|Ga0190268_11500595	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300019361\|Ga0173482_10600009	Not Available	553	Open in IMG/M
3300025907\|Ga0207645_11084926	Not Available	540	Open in IMG/M
3300025918\|Ga0207662_10866720	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300025925\|Ga0207650_10825140	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300025930\|Ga0207701_11361001	Not Available	580	Open in IMG/M
3300025940\|Ga0207691_10531824	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300025942\|Ga0207689_10433002	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300025942\|Ga0207689_10746356	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300026035\|Ga0207703_10514233	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300026088\|Ga0207641_10138872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	2190	Open in IMG/M
3300026088\|Ga0207641_12381950	Not Available	528	Open in IMG/M
3300026089\|Ga0207648_11016706	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300026095\|Ga0207676_10457746	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300026142\|Ga0207698_10915307	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300027476\|Ga0207514_103877	Not Available	533	Open in IMG/M
3300027691\|Ga0209485_1333529	Not Available	510	Open in IMG/M
3300027873\|Ga0209814_10210297	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300027886\|Ga0209486_10788809	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300027907\|Ga0207428_11181466	Not Available	533	Open in IMG/M
3300028381\|Ga0268264_10264802	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300028381\|Ga0268264_10311217	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300028381\|Ga0268264_11628869	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300031740\|Ga0307468_100480593	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300031892\|Ga0310893_10392972	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300032013\|Ga0310906_10184671	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300032075\|Ga0310890_10806200	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300032211\|Ga0310896_10171413	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300032211\|Ga0310896_10910735	Not Available	509	Open in IMG/M
3300033412\|Ga0310810_10556115	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300033475\|Ga0310811_10323852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1753	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.76%
Environmental	Environmental	47.24%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.76%
Terrestrial	Environmental → Terrestrial	45.67%
Aquatic	Environmental → Aquatic	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.26%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Roots	Host-Associated → Plants → Roots	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.24%
Loam	Environmental → Terrestrial → Soil → Loam	8.66%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.72%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.57%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027476	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08.2A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_120526852	3300000789	Soil	VVNGQLENSLRHEIETYLESRLGSIKQDISALQSLLNESLTGLFERQSDVPMEGSLSTAIAEHLR
JGI11643J12802_121785311	3300000890	Soil	VVNEQLEDSLRREIESYLDSRLSVIRQEISTLQSLLNESLSTFLDRQGDVQMEGSLVASITE
JGI10214J12806_108633111	3300000891	Soil	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSSFLERQSDVQMEGSMRAAIQEHLHAAHERGVELAASESS
C688J35102_1187649231	3300002568	Soil	VVNGHLEDSLRREIESHLENRLTAVKQEITTLQSLLNESLSSFLDRQADVQMDGSLIAAITEHLHAAHERGVELAASESSRAK
JGI25406J46586_100365591	3300003203	Tabebuia Heterophylla Rhizosphere	VVNGHLEDSLRHEIENYLDTRLSAVKQEIATLQSLLNESLANFLERQSDVQLEGSLVASITEHLHAAHERGIEHAASESSRA
soilL1_100386244	3300003267	Sugarcane Root And Bulk Soil	VVNGQLEDSLRREIESHLESRLSAVKQEITTLQSLLNESLSSFLERQTDVQTDASLVASITEHLHAAHERGVELAASESSRAK
soilL1_100466391	3300003267	Sugarcane Root And Bulk Soil	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLLNESLSTFLERHADVQMEGSMLAAITEHLHAAHERGVELAASESSR
soilL2_100018851	3300003319	Sugarcane Root And Bulk Soil	VVNGQLEDSLRREIESHLESRLSAVKQEITTLQSLLNESLSSFLERQTDVQTDASLVASITEHLHAA
soilL2_100103451	3300003319	Sugarcane Root And Bulk Soil	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLLNESLSTFVDRQADVQMEGSLIAAITEHLHAAHERGVELAASE
soilL2_100206864	3300003319	Sugarcane Root And Bulk Soil	VVNGHLEDSLRREIENYLDSRLEAVKQEIATLQSLLNESLSNFLERQSDVQVEGSLVASITEHLHAA
soilH1_100166133	3300003321	Sugarcane Root And Bulk Soil	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLLNESLSTFVDRQADVQMEGSLIAAITEHLHAAHERGVELAASESSRAK
Ga0063356_1055159592	3300004463	Arabidopsis Thaliana Rhizosphere	VVNGHLEDSLRREIESYLENRLSSVKQEIATLQSLVNESLSAFLERQADVQLEGSLVASITEHLHAAHERGIEHAAAES
Ga0062592_1011375811	3300004480	Soil	VVNGHLEDSLRREIESYLENRLSAVKQEITTLQSLLNESLTTFLDRQADVQMEGSMLNAIQEHLHAAHERGVELAASESSRAKAS
Ga0065704_107534381	3300005289	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLENRLGAVKQEITTLQSLLNESLTTFLDRQSDVQMEGSLLAAITEHLHAAHERGIEMAASESSRAK
Ga0066388_1040861852	3300005332	Tropical Forest Soil	VVNGHLEDSLRHEIESYLESRLSAVKQEITTLQTLLNESLSTFLDRQTDVQMEGSLIASITEHLHAAHERGVE
Ga0066388_1040915921	3300005332	Tropical Forest Soil	VVNGHLEDSLRREIESYLETRLTAVKQEITTLQSLLNESLSTLLERQSDVQLEGSLVSSITEHLHAAHER
Ga0070677_105413501	3300005333	Miscanthus Rhizosphere	VANGHLEDSLRQEIEHYFEGRLSAIKQEIALLQSQFNESLTTLLDRQGDVQTEGSLSTSIGEYLRAAHERGVDLAASESA
Ga0068869_1018618431	3300005334	Miscanthus Rhizosphere	VVNGHLEDSLRHEIESFLDGRLSAIKQEIASLQGQLNEALTSLLERQSDVQMEGSLATSIAEHLRAAHERGIDL
Ga0068868_1008306682	3300005338	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLENRLDAVRQEITTLQSLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAHERGVELAASESSRAK
Ga0070660_1010862442	3300005339	Corn Rhizosphere	VVNEQLEDSLRREIESYLDSRLNAIRQEISTLQSLLNESLSTFLDRQADVQMEGSLVASITEHLHAAHERGV
Ga0070691_105875511	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VVNEQLEDSLRREIESYVDNRLSAVRQEIATLQSLLNESLSTFLDRQADVQMEGSLIASITEHLHAA
Ga0070687_1003941222	3300005343	Switchgrass Rhizosphere	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSTLVERQSDVQMEGSMVAAIQEHLHAAHERGVELAASESSRAKA
Ga0070687_1008673241	3300005343	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRLSAVKQEITTLQSLLNESLSTFLERQGDVQMEGSLQAAITEHLHAAHERGVELAASESSRA
Ga0070692_104655651	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VVNGHLEDSLRREIENYLEARLSAVKQEIATLQSLLNESLSNFVERQSDVQLEGSLVASITEHLHAAHERGIEH
Ga0070668_1013248961	3300005347	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRMGAVKQEITTLQSLLNESLSTFLERHADVQMEGSMLASITEHLHAAHERGVELAASES
Ga0070671_1013277861	3300005355	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLVNESLSTFLERHADVQMEGSMLASITEHLHAAHERGVELAASESSRAKA
Ga0070673_1008341792	3300005364	Switchgrass Rhizosphere	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSTFVERQSDVQMEGSMVAAIQEHLHAAHERG
Ga0070673_1018186561	3300005364	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLESRLSSVKQEIATLQSLVNESLSAFLERQADVQLDGSLVASITEHLHAAHERGIEHAASES
Ga0070688_1012120931	3300005365	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDVQMTEGSLVASITEHLHAAHERGVELAASESSRAKAS
Ga0070662_1014814151	3300005457	Corn Rhizosphere	VVNGHLEDSLRREIESYLESRLGAVKQEITTLQSLLNESLSNFLDRQTDVQMDGSLVASITEHLHAAHE
Ga0068867_1021969352	3300005459	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLETRLSAVRQEITTLQSLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAHERGVELAASES
Ga0068853_1000260355	3300005539	Corn Rhizosphere	VVNGHLEDSLRHEIESFLDGRLSAIKQEIASLQGQLNEALTSLLERQSDVQMEGSLASSISEHLRAAHERGIDLAASESSR
Ga0070672_1005493461	3300005543	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLENRLDAVRQEITTLQSLLNESLSSFLDRQADVQMDGSLIAAITEHLHAAHERGVELA
Ga0070695_1005051001	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSTFVERQSDVQMEGSMVAAIQEHLHAAHERGVELA
Ga0068855_1006538561	3300005563	Corn Rhizosphere	VVNGHLEDSLRREIESYLETRMSSVKQEITTLQGLLNESLSAFLERQDDVQMEGSMIAAITEHLHAAHERGV
Ga0068855_1009386741	3300005563	Corn Rhizosphere	VVNGHLEDSLRREIENYLDTRLSAVKQEIATLQSLLNESLSNFVERQSDVQLEGSLVASITEHLHAAHERGIEHAASESSR
Ga0068855_1023960772	3300005563	Corn Rhizosphere	VVNGHLEDSLRHEIESFLDGRLSAIKQEIASLQGQLNEALSSLLERQSDVQMEGSLASSISEHLRAAHERGIDLA
Ga0068857_1014611361	3300005577	Corn Rhizosphere	VVNEQLEDSLRREIESYLDGRLSAIRQEISTLQSLLNESLSTFLDRQADVQMEGSLIASITEHLHAAHE
Ga0070702_1006661781	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VVNGHLEDSLRREIENYLEARLSAVKQEIATLQSLLNESLSNFVERQSDVQLEGSLVASITE
Ga0068852_1007630533	3300005616	Corn Rhizosphere	VVNGHLEDSLQRDIESYLETRMSAVKQEITTLQSLLNESLSSFLERQADVQMEASMQASITEHLHAAHERGVELAASESSRAK
Ga0068859_1006622293	3300005617	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRMSSVKQEITTLQNLLNESLSSFLEHQADVQMDGSLIAAITEHLHAAHERGVELAASE
Ga0068851_106695592	3300005834	Corn Rhizosphere	VVNGHLEDSLRREIESHLESRLTAVKQEITTLQSLLNESLSSFLERQADVQMEASMQASITEHLHAAHERGVEMAASESSRA
Ga0068858_1020349091	3300005842	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVRQEISTLQSLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAHERGVELAASESSRAKAS
Ga0068860_1009125541	3300005843	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRLSAVRQEISTLQSLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAHERG
Ga0075293_10614651	3300005875	Rice Paddy Soil	VVNGHLEDSLRREIESHLESRLSAVKQEITTLQSLLNESLSSFLERQADVQMDGSLIAAITEHLHAAHERG
Ga0075432_105284531	3300006058	Populus Rhizosphere	VVNGHLEDSLRREIESYLETRLSAVRQEITTLQNLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAH
Ga0082029_10039601	3300006169	Termite Nest	VVNEQLEESLRREVESYLDSRLSVIRQEISTLQSLLNESLQTFLDRQTDVQMEGSLVAAITEHLHAAH
Ga0082029_17952462	3300006169	Termite Nest	VVNGHLEDSLRREIESYLETRLSAVKQEITTLQSLLNESLSNFLDRQADIQMEGSLIASITEHLHAAHERGIEMAAAESSRAK
Ga0068871_1019793771	3300006358	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLDSRLNAVKQEIATLQSLLNESLSSFLERQSDVQVESSLVASITEHLHAA
Ga0079220_108013892	3300006806	Agricultural Soil	VVNGHLEDSLRHEIESYLEGRMSAVKQEITTLQSLLNESLSTFLDRQTDVQTEGSLVAAITEHLHAAHERGIELA
Ga0075433_119350051	3300006852	Populus Rhizosphere	VVNGHLEDSLRREIESYLEGRLSAVKQEIITLQSLLNESLSTFLDRQTDVQMEGSLLASISEHLRASHERGVELAASESSRAK
Ga0079215_107210961	3300006894	Agricultural Soil	VVNGHLEDSLRREIEGYLENRFSAVKQEISTLQSLLNESLSSFLERQGDAQLEGSLVASITEHLHAAHERG
Ga0075424_1016439441	3300006904	Populus Rhizosphere	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSTFVERQSDVQMEGSLVAAIQEHLHAA
Ga0075436_1002524761	3300006914	Populus Rhizosphere	VVNGHLEDSLRREIENYLDSRLSAVKQEIATLQSLLNESLSTFLERQSDTQLEGSLVASITEHLHAAHERGIE
Ga0075419_110044862	3300006969	Populus Rhizosphere	VVNGHLEDSLRREIESYLESRLGAVRQEIATLQSLLNESLSTFLDRQAANTQMEGSLVAAITEHLHAAHERGVELAASESSRAKAS
Ga0079218_116073561	3300007004	Agricultural Soil	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDAQMTEGSLIASIQEHLHAAHERGVELAA
Ga0105244_104498191	3300009036	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLVNESLSTFLERHADVQMEGSMLASITEHLHAAHERG
Ga0105240_127950471	3300009093	Corn Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSTFLDRQTDVQMEGSLIASITEHLHAAHE
Ga0105245_112472872	3300009098	Miscanthus Rhizosphere	VVNGHLEDSLRREIESHLESRLSAVKQEITTLQSLLNESLSSFLDRQADVQMEGSLIAAITEHLHAAHERGV
Ga0075418_108549633	3300009100	Populus Rhizosphere	VVNGHLEDSLRREIESYLESRLGAVRQEIATLQSLLNESLSTFLDRQAANTQMEGSLVAAITEHLHAAHERGV
Ga0075418_109918911	3300009100	Populus Rhizosphere	VVNEQLEDSLRREIESYLDSRLSVIRQEISTLQSLLNESLSTFLDRQGDVQMEGSLVASITEHLH
Ga0105247_108448861	3300009101	Switchgrass Rhizosphere	VVNGHLEDSLRQEIENYLDSRLDAVKQEIATLQSLLNESLSNFLERQSDMQVEGSLLASITEHLHAAHERGIEHAASETSRAK
Ga0114129_116585181	3300009147	Populus Rhizosphere	VVNGHLEDSLRREIESYLETRLSAVKQEITTLQSLLNESLSTFLERHADVQMEGSMLASITEHLHAAHERGVELAASE
Ga0105243_105181163	3300009148	Miscanthus Rhizosphere	VVNGQLEDSLRHEIESYLEGRLGAIKQEITTLQNQLNESLAGLMDRQGDASMEGSLATAIAEHLRSAHERGIELAAS
Ga0105092_107018331	3300009157	Freshwater Sediment	MEEQPVANGHLEDSLRQEIERYLEGRFSAIRQEIASLQSQFSESLTTLLNRQSDVQMEGSLATSIAEHLRASHERGI
Ga0075423_115073901	3300009162	Populus Rhizosphere	VVNGHLEDSLRREIENYLEARLSAVKQEIATLQSLLNESLSTFLERQSDTQLESSLVASITEHLHAAHERGIEHAAS
Ga0105242_118233012	3300009176	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLVNESLSTFLERHADVQMEGSMVAAITEHLHAAHERGV
Ga0105248_129833441	3300009177	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRMSSVKQEITTLQNLLNESLSSFLEHQADVQMDGSLIAAITEHLHAAHERGVELAASESSRAKAS
Ga0126310_101770993	3300010044	Serpentine Soil	VVNGHLEDSLRREIESYLEGRLSAVKQEITTLQSLLNESLSTFLERQSDVQMDASMVAAIQEHLHAAHERAVELA
Ga0126311_104155833	3300010045	Serpentine Soil	VVNGHLEDSLRREIESYFEGRLSAVKQEIASLQSLVNESLSTLLDRQSDVQLEGSLVASITEHLHAAHERGVELAASE
Ga0126320_10696791	3300010146	Soil	MEERAVVNGHLEDSLRREIESHLESRLSAVKQEITTLQSLLNESLSSFLDRQADVQMDGSLIAAITEHLHAAHER
Ga0134128_120258181	3300010373	Terrestrial Soil	VVNGHLEDSLRREIESYLETRLGAVKQEITTLQSLLNESLSTFLERQGDVQMEGSLQAAITEHLHAAHERGVELA
Ga0134128_131312381	3300010373	Terrestrial Soil	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSTFVERQSDVQMEGSMVAAIQEHLHAAHERGVELAASESSRAKA
Ga0134124_106447713	3300010397	Terrestrial Soil	VVNGHLEDSLRREIENYLEARLSAVKQEIATLQSLLNESLSNFVERQSDVQLEGSLVASITEHLHAAHERGIE
Ga0134124_108005922	3300010397	Terrestrial Soil	VVNGHLEDSLRREIESYLESRLSAVRQEISTLQSLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAHERGVELAASESSRAK
Ga0134127_112469302	3300010399	Terrestrial Soil	VVNEQLEDSLRREIESYVDSRLSAVRQEIATLQSLLNESLSTFLDRQGDVQMEGSLVASITEHLHAAHERGVELASS
Ga0134122_126106011	3300010400	Terrestrial Soil	MEERAVVNGHLEDSLRREIESHLESRLSAVKQEITTLQSLLNESLSSFLERQTDVQTDASLLASITEHLHAAHERGVELAASES
Ga0137370_105604951	3300012285	Vadose Zone Soil	VIFSLQHKQPTEERTVVSGQLEDSLRHEIESYMEGRLSAIRQEIASLQSQRHAPLSRLLERQGDVQMEGSVSASISEHLRAAHERGVELAAAESSRA
Ga0137370_107758982	3300012285	Vadose Zone Soil	LSKQHHYTEERAVVNGHLEDSLRREIESYLEGRLSAVKQEITSLQSLVNQSLTTFLDRQADVQMEGSLLASISEHLRAAH
Ga0157299_101757181	3300012899	Soil	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQNLLNESLSSFLEHQADVQMDGSLIAAITEHLHATHERGVEL
Ga0157298_102196762	3300012913	Soil	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDVQMEGSLIASITEHLHAAHERGVELA
Ga0137394_101347113	3300012922	Vadose Zone Soil	VVSGHLEDSLRHEIESYMEGRLSAIRQEIASLQSQLNESLTRLLERQGDVQMDGSVSASISEHLRAAHERGVELAAAESSR
Ga0126375_113536571	3300012948	Tropical Forest Soil	VVNGHLEDSLRHEIESYLETRLSAVKQEITSLQSLLNESLSNLLDRQTDVQMEGSLIASITEHLHAAHERGVELAAAESSRAKA
Ga0126375_118920991	3300012948	Tropical Forest Soil	VVNGHLEDSLRREIESYLESRLSAVRQEITTLQSLLNESLSSFVERQSDVQMEGSLVAAIQEHLHA
Ga0164299_113232641	3300012958	Soil	MEERAVVNGHLEDSLRREIESHLESRLAAVKQEITTLQSLLNESLSSFLERQADVQTDGSLIAAITEHLHAAHERGVELAASESSRAKAS
Ga0164305_108119042	3300012989	Soil	VVNGHLEDSLRREIENYLESRLDAVKQEIATLQSLLNESLSNFLERQSDMQVEGSLVASITEHLHAA
Ga0157373_108220591	3300013100	Corn Rhizosphere	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLLNESLSTFLERHADVQMEGSMLASITEH
Ga0157378_109602972	3300013297	Miscanthus Rhizosphere	VVNGHLEDSLRHEIESYLEGRLSAIKQEIASLQGQLNEGLSSLLERQSDVQMEGSLATSIGEHLRAAHERGIDLAASESSRAKAS
Ga0157378_126251462	3300013297	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLETRLGAVRQEITSLQRLLNESLSSFLDRQAANVQMEGSLVAAITE
Ga0157378_130861681	3300013297	Miscanthus Rhizosphere	VVNGHVEDSLRREIESHLESRLSAVKQEITTLQSLVNESLSTFLERHADVQMEGSMLASITEHLHAAHERGVELAASESSRAKAS
Ga0157372_111758961	3300013307	Corn Rhizosphere	LEESLRREIESYLDSRLSAVKQEIATLQSLVNESLSGLLERPSDVQLEGSLVASITEHLHAAHERGIE
Ga0157375_107759052	3300013308	Miscanthus Rhizosphere	VVNEQLEESLRREIESYLDSRLSAIRQEIATLQSLLNESLSTFLDRQGDVQMEGSLVASITEHLHAAPERGVELA
Ga0163163_106105873	3300014325	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDVQMTEGSLVASITEHLHAAHERGVELAASESS
Ga0157377_116891781	3300014745	Miscanthus Rhizosphere	VVNGHLEDSLRREIESHLESRLTAVKQEITTLQSLLNESLSSFLERQADVQTDASLIAAIAEHLHAAHERGVELAASESSRAKA
Ga0132256_1017821092	3300015372	Arabidopsis Rhizosphere	VVNGHLEDSLRREIESALESRLSAVKQEITTLQSLLNESLSNFLDRQTDAQMTEGSLIASIQEHLHAAHERGV
Ga0132256_1023389541	3300015372	Arabidopsis Rhizosphere	VVNGHLEDSLRREIESYLENRLSAFKQEISTLQSLLNESLSTFLDRQADVQLEGSSVSSITEHLHA
Ga0190268_115005951	3300018466	Soil	VVNGQLEDSLRREIESYLENRLSAVKQEITTLQSLLNESLTTFLERQGDVQVEGSLQASITEHLHAAHERGI
Ga0173482_106000091	3300019361	Soil	VVNGHLEDSLRREIESYLDGRLDAIKQEITTLQSLLNESLSNFLDRQADVHMEGSLVASITEHLHAAHERGVEMALA
Ga0207645_110849261	3300025907	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLESRLGAVKQEITTLQSLLNESLSNFLDRQTDVQMEGSLVASITEHLHAAHERGVELAASESSRAK
Ga0207662_108667201	3300025918	Switchgrass Rhizosphere	VVNEQLEESLRREIESYLDSRLGAIRQEIATLQSLLNESLSTFLDRQGDVQMEGSLVASITEHLHAAHERGVELASSQTSRA
Ga0207650_108251401	3300025925	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDAQMTEGSLVASITEHLHAAHERGVELAASESSRAKA
Ga0207701_113610011	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VVNGQLEDSLRHEIETYLEGRLSAIKQEIATLQSQMNESLANLLDRQGEMQMEGSLSTSIAEH
Ga0207691_105318241	3300025940	Miscanthus Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSNFLDRQTDVQMTEGSLVASITEHLHAAHERGVELAASESSRAKA
Ga0207689_104330023	3300025942	Miscanthus Rhizosphere	VANGQLEDSLRREIESYLESRLSAVRQEIGALQSLLNESLSTFVERQSDVQMEGSMVAAIQEHLHA
Ga0207689_107463562	3300025942	Miscanthus Rhizosphere	VVNGHLEDSLRHEIENYLDTRLSAVKQEIATLQSLLNESLSNFLERQSDVQVEGSLVASITEHLHA
Ga0207703_105142333	3300026035	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRLSAVRQEITTLQSLLNESLSTFLDRQGDVQMEGSLVAAITEHLHAAHERGVELAASESS
Ga0207641_101388723	3300026088	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLEGRLSAVKQEITTLQSLLNESLSTFLDRQSDVQMEGSMLAAITEH
Ga0207641_123819501	3300026088	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSTFLDRQTDVQMEGSLIASITEHLHAAHERGVELAASES
Ga0207648_110167062	3300026089	Miscanthus Rhizosphere	VVNGHLEDSLRHEIESFLDGRLSAIKQEIASLQGQLNESLSSLLERQSDVQMEGSLAASIAEHLHE
Ga0207676_104577461	3300026095	Switchgrass Rhizosphere	VVNGQLEDSLRREIESYLETRLSAVRQEISALQSLLNESLSSFVDRQSDVQMEGSMVAAIQEHLHA
Ga0207698_109153072	3300026142	Corn Rhizosphere	VVNGHLEDSLRREIESYLENRLDAVRQEITTLQSLLNESLSTFLDRQAANVQMEGSLVAAIAEHLHAAHERGVELAASESSRAKAS
Ga0207514_1038771	3300027476	Soil	VVNGHLEDSLRREIESYLESRLSAVRQEITTLQSLLNESLTTFLDRQGDVQMEGSLVAAITEHLHAAHERGIEL
Ga0209485_13335291	3300027691	Agricultural Soil	VVNGHLEESLRREIETYLDSRLSAVKQEIATLQSLVNESISGFLERQSDVQLEGSLVASITEHLHAAHERGIEMAAAEST
Ga0209814_102102972	3300027873	Populus Rhizosphere	VVNGHLEDSLRHEIESYLETRLSAVKQEITTLQSLLNESLTTFLDRQADVQMEGSLQAAITEHLHAAHERGVELAASE
Ga0209486_107888092	3300027886	Agricultural Soil	VVNEQLEDSLRREIESYVDSRLSAVRTEIATLQSLLNESLSTFLDRQADVQMEGSLVASITEHLHAAH
Ga0207428_111814661	3300027907	Populus Rhizosphere	VANGHLEDSLRQEIEHYFEGRLSAIKQEIALLQSQFNESLTTLLDRQGDVQTEGSLSTSIGEYLRAAH
Ga0268264_102648021	3300028381	Switchgrass Rhizosphere	VVNGHLEDSLRREIESYLETRMSAVKQEITTLQSLLNESLSTFLERHADVQMEGSMLASITEHLHA
Ga0268264_103112173	3300028381	Switchgrass Rhizosphere	VVNEQLEESLRREIESYLDSRLGAIRQEIATLQSLLNESLSTFLDRQGDVQMEGSLVASITEHLHAAHERGVELASSQTSRAK
Ga0268264_116288691	3300028381	Switchgrass Rhizosphere	VANGHLEDSLRQEIEHYFEGRLSAIKQEIALLQSQFNESLTTLLDRQGDVQTEGSLSTSIGEYL
Ga0307468_1004805931	3300031740	Hardwood Forest Soil	VVNGHLENSLRQEIESYLEGRLSSLKQEIASLQSQLHESLSGLLDRQGDVQIEGSLTSSIAEHLRAAHEQGIE
Ga0310893_103929721	3300031892	Soil	VVNGHLEDSLRREIESYLESRLSAVKQEITTLQSLLNESLSTFLERHADVQMEGSMLASITEHLHAAHER
Ga0310906_101846711	3300032013	Soil	VVNEQLEDSLRREIESYVDNRLSAVRQEIATLQSLLNESLSTFLDRQGDVQMEGSLVASITEHLHAAHERGVELASSQTSRAKA
Ga0310890_108062001	3300032075	Soil	VVNGHLEDSLRREIESYLETRLSAVKQEITTLQSLLNESLSTFLERQADVQMDGSMIASITEHLHAAHERGVEL
Ga0310896_101714133	3300032211	Soil	VANGHLEDSLRQEIEHYFEGRLSAIKQEIALLQSQFNESLTTLLDRQGDVQTEGSLSTSIGEYLRAAHERGVDLAASESARA
Ga0310896_109107351	3300032211	Soil	VVNGQLEDSLRHEIESYLEGRLGSLKQEIASLQSQLNDSLAGLLDRQGDVQMEGSLTSSIAEHLRAAHERGIELA
Ga0310810_105561151	3300033412	Soil	VVNGHLEDSLRREIESYLESRVSAVKQEITTLQSLLNESLSTFLERQADVQMEGSLIASITEHLH
Ga0310811_103238521	3300033475	Soil	VVNGHLEDSLRREIESYLESRVSAVKQEITTLQSLLNESLSTFLERQADVQMEGSLIASITEHLHAAHERGVELAASESS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign