Metagenome / Metatranscriptome Family F066099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	40 residues
Representative Sequence	MGVDNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR
Number of Associated Samples	109
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.84 %
% of genes near scaffold ends (potentially truncated)	41.73 %
% of genes from short scaffolds (< 2000 bps)	80.31 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.764 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.748 % of family members)
Environment Ontology (ENVO)	Unclassified (27.559 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.819 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 0.00% Coil/Unstructured: 53.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF02627	CMD	33.86
PF01557	FAA_hydrolase	14.17
PF07883	Cupin_2	2.36
PF00072	Response_reg	1.57
PF13343	SBP_bac_6	1.57
PF09298	FAA_hydrolase_N	1.57
PF03401	TctC	0.79
PF13356	Arm-DNA-bind_3	0.79
PF02615	Ldh_2	0.79
PF12697	Abhydrolase_6	0.79
PF04392	ABC_sub_bind	0.79
PF03480	DctP	0.79
PF00892	EamA	0.79
PF00905	Transpeptidase	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	33.86
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	33.86
COG0179	2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.57
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.79
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.79
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.76 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.76 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.76 %
Unclassified	root	N/A	10.24 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.50 %
Unclassified	root	N/A	10.24 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.75 %
Unclassified	root	N/A	10.24 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.15 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.15 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	3.15 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.24 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.72 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3.15 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16478999	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0550985	Not Available	813	Open in IMG/M
3300000559\|F14TC_101754500	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300000559\|F14TC_105555940	Not Available	522	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1064829	Not Available	646	Open in IMG/M
3300000858\|JGI10213J12805_11139778	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300001305\|C688J14111_10148011	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300002906\|JGI25614J43888_10005705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4003	Open in IMG/M
3300002917\|JGI25616J43925_10032225	All Organisms → cellular organisms → Bacteria → Proteobacteria	2316	Open in IMG/M
3300004267\|Ga0066396_10094667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300004479\|Ga0062595_101740424	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005167\|Ga0066672_10233178	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300005184\|Ga0066671_10391183	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300005332\|Ga0066388_101617354	All Organisms → cellular organisms → Bacteria → Proteobacteria	1141	Open in IMG/M
3300005332\|Ga0066388_108061395	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300005332\|Ga0066388_108637731	Not Available	506	Open in IMG/M
3300005332\|Ga0066388_108760164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300005363\|Ga0008090_10057415	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005363\|Ga0008090_10250539	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005434\|Ga0070709_10068717	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300005435\|Ga0070714_101354055	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300005436\|Ga0070713_100127258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2242	Open in IMG/M
3300005445\|Ga0070708_101149592	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300005518\|Ga0070699_100019097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5896	Open in IMG/M
3300005553\|Ga0066695_10635041	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300005562\|Ga0058697_10384308	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005713\|Ga0066905_100345837	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300005713\|Ga0066905_100347054	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300005713\|Ga0066905_102229015	Not Available	511	Open in IMG/M
3300005764\|Ga0066903_100457880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2136	Open in IMG/M
3300005764\|Ga0066903_101451771	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300005764\|Ga0066903_104658191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	730	Open in IMG/M
3300005764\|Ga0066903_107483204	Not Available	563	Open in IMG/M
3300005843\|Ga0068860_100109313	All Organisms → cellular organisms → Bacteria → Proteobacteria	2642	Open in IMG/M
3300005937\|Ga0081455_10004584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15440	Open in IMG/M
3300005981\|Ga0081538_10101928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1442	Open in IMG/M
3300006038\|Ga0075365_10081928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2187	Open in IMG/M
3300006038\|Ga0075365_10850864	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300006172\|Ga0075018_10563407	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300006175\|Ga0070712_100396130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1139	Open in IMG/M
3300006178\|Ga0075367_10800111	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300006844\|Ga0075428_100029454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6074	Open in IMG/M
3300006845\|Ga0075421_100223623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2318	Open in IMG/M
3300006854\|Ga0075425_100181162	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300006871\|Ga0075434_100373072	All Organisms → cellular organisms → Bacteria → Proteobacteria	1448	Open in IMG/M
3300009089\|Ga0099828_11167956	Not Available	683	Open in IMG/M
3300009090\|Ga0099827_10025348	All Organisms → cellular organisms → Bacteria → Proteobacteria	4199	Open in IMG/M
3300009147\|Ga0114129_11218950	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300010046\|Ga0126384_10122994	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300010048\|Ga0126373_12318461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300010154\|Ga0127503_10255268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300010154\|Ga0127503_10438122	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300010154\|Ga0127503_10942178	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300010303\|Ga0134082_10535653	Not Available	514	Open in IMG/M
3300010358\|Ga0126370_10502499	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300010358\|Ga0126370_10716658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300010358\|Ga0126370_10840962	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300010361\|Ga0126378_11640983	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300010362\|Ga0126377_12261576	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300010366\|Ga0126379_10209788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1882	Open in IMG/M
3300010366\|Ga0126379_11233322	Not Available	854	Open in IMG/M
3300010376\|Ga0126381_100839068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300011119\|Ga0105246_12398319	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300011271\|Ga0137393_11511888	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300012198\|Ga0137364_10353397	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300012200\|Ga0137382_10453098	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300012204\|Ga0137374_10034675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5446	Open in IMG/M
3300012208\|Ga0137376_11655098	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300012923\|Ga0137359_10145173	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300012951\|Ga0164300_10200918	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012986\|Ga0164304_10325204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300014166\|Ga0134079_10490464	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300016357\|Ga0182032_10400930	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300016387\|Ga0182040_11139483	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300018000\|Ga0184604_10235600	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300018468\|Ga0066662_10567438	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300018482\|Ga0066669_10607004	All Organisms → cellular organisms → Bacteria → Proteobacteria	959	Open in IMG/M
3300020170\|Ga0179594_10086761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300020580\|Ga0210403_10608691	All Organisms → cellular organisms → Bacteria → Proteobacteria	882	Open in IMG/M
3300020581\|Ga0210399_11047464	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300021168\|Ga0210406_10129048	All Organisms → cellular organisms → Bacteria → Proteobacteria	2133	Open in IMG/M
3300021560\|Ga0126371_10345564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1622	Open in IMG/M
3300021560\|Ga0126371_11232562	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300021953\|Ga0213880_10097804	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300025910\|Ga0207684_11552383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	537	Open in IMG/M
3300025915\|Ga0207693_10489479	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300025916\|Ga0207663_10104575	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300025916\|Ga0207663_10629588	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300025938\|Ga0207704_10439280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1039	Open in IMG/M
3300025961\|Ga0207712_10359813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1212	Open in IMG/M
3300025981\|Ga0207640_10082939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2197	Open in IMG/M
3300026078\|Ga0207702_12449202	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300026306\|Ga0209468_1139127	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300026310\|Ga0209239_1002603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10716	Open in IMG/M
3300026494\|Ga0257159_1063457	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300026514\|Ga0257168_1088078	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300027873\|Ga0209814_10094582	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300027907\|Ga0207428_10725434	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300028784\|Ga0307282_10285295	All Organisms → cellular organisms → Bacteria → Proteobacteria	795	Open in IMG/M
3300028885\|Ga0307304_10589242	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300030903\|Ga0308206_1193757	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300030905\|Ga0308200_1017873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1103	Open in IMG/M
3300031091\|Ga0308201_10188520	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300031152\|Ga0307501_10143535	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300031184\|Ga0307499_10138345	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031543\|Ga0318516_10000509	All Organisms → cellular organisms → Bacteria → Proteobacteria	12444	Open in IMG/M
3300031544\|Ga0318534_10405304	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031545\|Ga0318541_10036350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2473	Open in IMG/M
3300031561\|Ga0318528_10141118	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300031564\|Ga0318573_10267600	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300031640\|Ga0318555_10125522	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300031680\|Ga0318574_10728472	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300031716\|Ga0310813_10966950	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300031740\|Ga0307468_101241658	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300031764\|Ga0318535_10013426	All Organisms → cellular organisms → Bacteria → Proteobacteria	2995	Open in IMG/M
3300031792\|Ga0318529_10367058	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300031794\|Ga0318503_10037809	All Organisms → cellular organisms → Bacteria → Proteobacteria	1438	Open in IMG/M
3300031795\|Ga0318557_10102383	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300031890\|Ga0306925_10135409	All Organisms → cellular organisms → Bacteria → Proteobacteria	2645	Open in IMG/M
3300031912\|Ga0306921_11186277	Not Available	851	Open in IMG/M
3300031941\|Ga0310912_11363389	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300032009\|Ga0318563_10359222	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300032094\|Ga0318540_10076670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1544	Open in IMG/M
3300032180\|Ga0307471_101154455	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.25%
Host-Associated	Host-Associated	15.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.31%
Plants	Host-Associated → Plants	15.75%
Aquatic	Environmental → Aquatic	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Roots	Host-Associated → Plants → Roots	3.15%
Freshwater	Environmental → Aquatic → Freshwater	2.36%
Sediment	Environmental → Aquatic → Sediment	1.57%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%
Phylloplane	Host-Associated → Plants → Phylloplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.84%
Loam	Environmental → Terrestrial → Soil → Loam	19.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.36%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.36%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.57%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.36%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.57%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02266260	2088090014	Soil	MGVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR
ICChiseqgaiiDRAFT_05509852	3300000033	Soil	MGVDDVDFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
F14TC_1017545001	3300000559	Soil	MGVDNVLFLHRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
F14TC_1055559401	3300000559	Soil	MGVDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRI
AF_2010_repII_A100DRAFT_10648292	3300000655	Forest Soil	MGVDDVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
JGI10213J12805_111397782	3300000858	Soil	MALSVGDGIGAEDVIFLQRLLLHYGVYRRYPLRPWPALKNAWRIVLR*
C688J14111_101480112	3300001305	Soil	AEETLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR*
JGI25614J43888_100057052	3300002906	Grasslands Soil	MGVEHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
JGI25616J43925_100322252	3300002917	Grasslands Soil	MGVDNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0066396_100946672	3300004267	Tropical Forest Soil	MGVNNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0062595_1017404242	3300004479	Soil	PIMGVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR*
Ga0066672_102331782	3300005167	Soil	MGVDNVFFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0066671_103911831	3300005184	Soil	MGVDDVVYLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0066388_1016173542	3300005332	Tropical Forest Soil	LDRAEWIGDNHVLTLRRLLLHYGVYRRYPLRPWPAFKNACRIVFR*
Ga0066388_1080613952	3300005332	Tropical Forest Soil	MGVDDVFFLQRLLLHYGIYRRYPLRRWPAFKNAWRVAFR*
Ga0066388_1086377311	3300005332	Tropical Forest Soil	MGVDDVVFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0066388_1087601641	3300005332	Tropical Forest Soil	LALVDTEMGVDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0008090_100574151	3300005363	Tropical Rainforest Soil	MGVDHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0008090_102505392	3300005363	Tropical Rainforest Soil	LALVDTEMGVDDVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0070709_100687174	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR*
Ga0070714_1013540551	3300005435	Agricultural Soil	YHWSDTVQFLERLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0070713_1001272581	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGVNDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR*
Ga0070708_1011495921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGVEHVLFLQRLLLHYGVYRRYPLRPWPAFKNAWRIAFR*
Ga0070699_1000190977	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGVDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0066695_106350412	3300005553	Soil	VLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0058697_103843082	3300005562	Agave	VQFLERLLLHYGIYRRYPLKPWPALKNAWRIAFR*
Ga0066905_1003458371	3300005713	Tropical Forest Soil	MGVDDVLFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0066905_1003470542	3300005713	Tropical Forest Soil	MIGWNVHAGTALSVGDWDRAEDVVFLQRLLLHYGVYRRYPLRPWPALKNAWRIVVR*
Ga0066905_1022290151	3300005713	Tropical Forest Soil	VTFFERLLLHYRVYRGYPLAPWPAFKNACRIVFR*
Ga0066903_1004578804	3300005764	Tropical Forest Soil	MGVDHVRFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0066903_1014517712	3300005764	Tropical Forest Soil	METIVLILQRLLLHYGVYRRYPLRRWPAFKNACRIVFR*
Ga0066903_1046581912	3300005764	Tropical Forest Soil	MVAFLRRFSLHYGIYRRYPLRPLKALKNAWRIARD*
Ga0066903_1074832041	3300005764	Tropical Forest Soil	VDTFNVGVDHVLFLQRLLLHYGIYRRYPLKPWPAFKN
Ga0068860_1001093133	3300005843	Switchgrass Rhizosphere	LGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR*
Ga0081455_100045848	3300005937	Tabebuia Heterophylla Rhizosphere	LLFLERLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0081538_101019283	3300005981	Tabebuia Heterophylla Rhizosphere	VLFLQRLLLHYGIYRRYPLKPWPAFKNAWRVAFR*
Ga0081540_11368822	3300005983	Tabebuia Heterophylla Rhizosphere	SMVSTDGADSERIGTAAPVPALLDTRLDTKIWSRTLLFLERLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0075365_100819282	3300006038	Populus Endosphere	LAFRLKKTLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR*
Ga0075365_108508642	3300006038	Populus Endosphere	DEETLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR*
Ga0075018_105634072	3300006172	Watersheds	MPRMGVDHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRLAFR*
Ga0070712_1003961303	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR*
Ga0075367_108001111	3300006178	Populus Endosphere	PAGQFWRLGEETLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR*
Ga0075428_1000294546	3300006844	Populus Rhizosphere	MGVDNVLFLERLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0075421_1002236233	3300006845	Populus Rhizosphere	VTFIDRLLLHYKVYRGYPLAPWPAFKNACRIVFR*
Ga0075425_1001811624	3300006854	Populus Rhizosphere	LVDTHNGVDDVVFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0075434_1003730723	3300006871	Populus Rhizosphere	VDTHNGVDDVVFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0099828_111679561	3300009089	Vadose Zone Soil	VAFLERLLLHYKVYRRYPLARWPAFKNACRIVFR*
Ga0099827_100253483	3300009090	Vadose Zone Soil	LLFFERLLLHYGIYRRYPLKPWPAFKNAWRIVLR*
Ga0114129_112189501	3300009147	Populus Rhizosphere	MGVDNVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0126374_114527562	3300009792	Tropical Forest Soil	MIGTIAPVSALVDTPMGVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0126384_101229942	3300010046	Tropical Forest Soil	VALVDTEWESTNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0126373_123184612	3300010048	Tropical Forest Soil	LVDTEMGVDDVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0127503_102552682	3300010154	Soil	NVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0127503_104381222	3300010154	Soil	DDVLFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0127503_109421782	3300010154	Soil	EHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0134082_105356531	3300010303	Grasslands Soil	MGVDDVVYLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0126370_105024993	3300010358	Tropical Forest Soil	GTIAPVSALVDTPMGVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0126370_107166582	3300010358	Tropical Forest Soil	VALVDTEMGVDNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0126370_108409622	3300010358	Tropical Forest Soil	MGVDDVLFLQRLMLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0126378_116409831	3300010361	Tropical Forest Soil	DVLFLQRLMLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0126377_122615761	3300010362	Tropical Forest Soil	MGVDDVFFLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0126379_102097882	3300010366	Tropical Forest Soil	MIGTIAPVAALVDTPMGVDHVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0126379_112333221	3300010366	Tropical Forest Soil	MGVDDVVFLQRLMLHYGIYRRYPLRRWPAFKNAWRIAFR*
Ga0126381_1008390682	3300010376	Tropical Forest Soil	MVAFLRRFSLHYGIYRRYPLRPFKALKNAWRIARD*
Ga0105246_123983192	3300011119	Miscanthus Rhizosphere	EETLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR*
Ga0137393_115118881	3300011271	Vadose Zone Soil	NVLFLERLLLHYAIYRRYPLKPWPALKNAWRIVLR*
Ga0137364_103533971	3300012198	Vadose Zone Soil	VLFLERLLLHYGIYRRYPLKPWPAFKNAWRIAFR*
Ga0137382_104530982	3300012200	Vadose Zone Soil	MGVDNVLFLPPLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0137374_100346752	3300012204	Vadose Zone Soil	VTFLERLLLHYRVYRRYPLAPWPAFKNACRIVLR*
Ga0137376_116550981	3300012208	Vadose Zone Soil	IPTMGVDNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0137359_101451732	3300012923	Vadose Zone Soil	MGVDNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR
Ga0164300_102009182	3300012951	Soil	MGVDDVDCLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR*
Ga0164304_103252042	3300012986	Soil	MGVDDVDFLQRLLLHYGIYRRYPLRRRPALKNAWRIAFR*
Ga0134079_104904641	3300014166	Grasslands Soil	TMGVDNVFFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR*
Ga0182032_104009301	3300016357	Soil	MGVDTVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0182040_111394832	3300016387	Soil	MGVDHVFFLQRLVLHYGIYRRYPLKPWPAFKNAWRIAF
Ga0184604_102356001	3300018000	Groundwater Sediment	LGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0066662_105674382	3300018468	Grasslands Soil	MGVDNVLFLQRLLLHYGIYRRYPLSPWPAFKNAWRLAFS
Ga0066669_106070041	3300018482	Grasslands Soil	PMGVDDVVYLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR
Ga0179594_100867612	3300020170	Vadose Zone Soil	MGVEHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR
Ga0210403_106086912	3300020580	Soil	MGVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRVAFR
Ga0210399_110474641	3300020581	Soil	MGVDDVLFLQRLLLHYGIYRRYPLRRWPALKNAWRVAFR
Ga0210406_101290481	3300021168	Soil	WIPTMGVDDVLFLQRLLLHYGIYRRYPLRRWPALKNAWRVAFR
Ga0126371_103455642	3300021560	Tropical Forest Soil	MIGTIAPVAALVDTPMGVDHVFFLQRFLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0126371_112325622	3300021560	Tropical Forest Soil	LALVDTEMGVDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0213880_100978042	3300021953	Exposed Rock	LGVDDVVFLQRLMLHYGIYRRYPLRRWPAFKNAWRIAFR
Ga0207684_115523831	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	WSRDVPFLHRLLLHYGIYRRYPLRPWPALKNAWRVAWR
Ga0207693_104894791	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PIMGVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR
Ga0207663_101045751	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRI
Ga0207663_106295881	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GVDDVDFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR
Ga0207704_104392801	3300025938	Miscanthus Rhizosphere	TDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0207712_103598133	3300025961	Switchgrass Rhizosphere	DTDVQFLDRLMLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0207640_100829393	3300025981	Corn Rhizosphere	EETLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0207702_124492022	3300026078	Corn Rhizosphere	DVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0209468_11391272	3300026306	Soil	MGVDDVVYLQRLLLHYGIYRRYPLRRWPAFKNAWRIAFR
Ga0209239_10026032	3300026310	Grasslands Soil	MGVDNVFFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR
Ga0257159_10634572	3300026494	Soil	GVDHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRLAFR
Ga0257168_10880781	3300026514	Soil	MGVEHVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRI
Ga0209814_100945822	3300027873	Populus Rhizosphere	MGVDNVLFLERLLLHYGIYRRYPLRPWPAFKNAWRIAFR
Ga0207428_107254342	3300027907	Populus Rhizosphere	DTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0307282_102852951	3300028784	Soil	TLGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0307304_105892421	3300028885	Soil	PIMGVDDVVFLQRLLLHYGIYRRYPLRRWPALKNAWRIAFR
Ga0308206_11937572	3300030903	Soil	PGDTDVQFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0308200_10178731	3300030905	Soil	DVQFFDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0308201_101885202	3300031091	Soil	TDVHFLDRLLLHYGIYRRYPLRPWPAFKNAWRISFR
Ga0307501_101435352	3300031152	Soil	DVQFLDRLLLHYGIYRRYPLRPRPAFKNAWRISFR
Ga0307499_101383452	3300031184	Soil	VWALSIGDEIGADDVIFLQRLLLHYGVYRRYPLRPWPALKNAWRIVLR
Ga0318516_100005096	3300031543	Soil	MGGDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318534_104053041	3300031544	Soil	LVGTPIRVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318541_100363502	3300031545	Soil	MGVDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318528_101411182	3300031561	Soil	VALVDTEMGVDTVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318573_102676001	3300031564	Soil	MGGDNVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFS
Ga0318555_101255222	3300031640	Soil	LALVDTEMGVDDVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318574_107284721	3300031680	Soil	VGTPMGVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0310813_109669502	3300031716	Soil	LVDTHNGVDDVVFLQRLLLHYGIYRRWPAFKNAWRIAFR
Ga0307468_1012416582	3300031740	Hardwood Forest Soil	RSRNVIFVQRLLLHYGVYRRYPLRPWPALKNAWRIVVR
Ga0318535_100134261	3300031764	Soil	MGVNNVLFLQRLLLHYGIYRRYPLRPWPAFKNAWRIAFR
Ga0318521_101625694	3300031770	Soil	HRAAVALVDTEMGVDTVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318529_103670581	3300031792	Soil	PMGVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318503_100378091	3300031794	Soil	GVDTVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318557_101023833	3300031795	Soil	ALVDTEMGVDDVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0306925_101354092	3300031890	Soil	MGVDNVLFLQRLLLYYGIYRRYPLRPWPAFKNAWRIAFR
Ga0306921_111862771	3300031912	Soil	MVAFLRRFSLHYGIYRRYPLRPFKALKNAWRIARD
Ga0310912_113633892	3300031941	Soil	MGVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRI
Ga0318563_103592222	3300032009	Soil	NVLFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0318540_100766703	3300032094	Soil	TPMGVDHVFFLQRLLLHYGIYRRYPLKPWPAFKNAWRIAFR
Ga0307471_1011544552	3300032180	Hardwood Forest Soil	LTIGADDVQFLERLLLHYGIYRRYPLKPWPALKNAWRVATR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences