Metagenome / Metatranscriptome Family F066086

Basic Information
Family ID	F066086
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	40 residues
Representative Sequence	ARGQRSMYLTSPAGFTVVVTGNATWAELRELAASLRPVAA
Number of Associated Samples	114
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.59 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	87.40 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (96.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.260 % of family members)
Environment Ontology (ENVO)	Unclassified (18.110 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.669 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.71% β-sheet: 17.65% Coil/Unstructured: 67.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF03631	Virul_fac_BrkB	62.20
PF02601	Exonuc_VII_L	9.45
PF02609	Exonuc_VII_S	4.72
PF13742	tRNA_anti_2	2.36
PF13540	RCC1_2	1.57
PF03320	FBPase_glpX	0.79
PF06071	YchF-GTPase_C	0.79
PF12697	Abhydrolase_6	0.79
PF13655	RVT_N	0.79
PF02401	LYTB	0.79
PF07592	DDE_Tnp_ISAZ013	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	62.20
COG1570	Exonuclease VII, large subunit	Replication, recombination and repair [L]	9.45
COG1722	Exonuclease VII small subunit	Replication, recombination and repair [L]	4.72
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.57
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.79
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	94.49 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	94.49 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.40 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	35.43 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	17.32 %
Unclassified	root	N/A	3.15 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	35.43 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	10.24 %
Unclassified	root	N/A	3.15 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	35.43 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	10.24 %
Unclassified	root	N/A	3.15 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	35.43 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	10.24 %
Unclassified	root	N/A	3.15 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102J06U3	Not Available	519	Open in IMG/M
3300001356\|JGI12269J14319_10091647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1542	Open in IMG/M
3300005435\|Ga0070714_102065499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300005435\|Ga0070714_102235243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300005437\|Ga0070710_10070543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2013	Open in IMG/M
3300005548\|Ga0070665_101205948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300005569\|Ga0066705_10845669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300005576\|Ga0066708_10859080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300006059\|Ga0075017_101544070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300006102\|Ga0075015_100616488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	636	Open in IMG/M
3300006162\|Ga0075030_100413502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075	Open in IMG/M
3300006173\|Ga0070716_100014970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3979	Open in IMG/M
3300006755\|Ga0079222_11864416	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300006800\|Ga0066660_10741506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300006806\|Ga0079220_10280310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1017	Open in IMG/M
3300009523\|Ga0116221_1426125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300009524\|Ga0116225_1034150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2508	Open in IMG/M
3300009524\|Ga0116225_1434308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300009551\|Ga0105238_10271516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1676	Open in IMG/M
3300009839\|Ga0116223_10069116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2268	Open in IMG/M
3300010339\|Ga0074046_10392165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	839	Open in IMG/M
3300010341\|Ga0074045_10476378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300010373\|Ga0134128_10666645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156	Open in IMG/M
3300010373\|Ga0134128_12052322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300010398\|Ga0126383_10679746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300010876\|Ga0126361_10741737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1657	Open in IMG/M
3300011119\|Ga0105246_10203614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1540	Open in IMG/M
3300012201\|Ga0137365_10108460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2088	Open in IMG/M
3300012210\|Ga0137378_10158042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2102	Open in IMG/M
3300012357\|Ga0137384_10059785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3159	Open in IMG/M
3300012362\|Ga0137361_11368475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300012923\|Ga0137359_11429095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300012987\|Ga0164307_10640129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300013307\|Ga0157372_12252766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300013307\|Ga0157372_13009866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300014969\|Ga0157376_11641198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300016294\|Ga0182041_10383155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1191	Open in IMG/M
3300016341\|Ga0182035_11147242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300017926\|Ga0187807_1189478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300017959\|Ga0187779_10349261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	955	Open in IMG/M
3300017972\|Ga0187781_11037167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	600	Open in IMG/M
3300017973\|Ga0187780_10867186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300017973\|Ga0187780_11479368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300018085\|Ga0187772_10220082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1281	Open in IMG/M
3300018085\|Ga0187772_10370952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	992	Open in IMG/M
3300018085\|Ga0187772_11235634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300018468\|Ga0066662_10102477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2031	Open in IMG/M
3300018482\|Ga0066669_10236854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1431	Open in IMG/M
3300021178\|Ga0210408_10064205	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300021181\|Ga0210388_10351687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1296	Open in IMG/M
3300021374\|Ga0213881_10001700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10135	Open in IMG/M
3300021403\|Ga0210397_10395740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1032	Open in IMG/M
3300021404\|Ga0210389_10240737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1414	Open in IMG/M
3300021404\|Ga0210389_10883220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300021406\|Ga0210386_10538113	Not Available	1010	Open in IMG/M
3300021432\|Ga0210384_10355813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1318	Open in IMG/M
3300021432\|Ga0210384_10504828	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300025906\|Ga0207699_10509713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300025915\|Ga0207693_11042992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300025928\|Ga0207700_11427854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300025929\|Ga0207664_10458548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300025960\|Ga0207651_11987412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300025972\|Ga0207668_10210226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1556	Open in IMG/M
3300026023\|Ga0207677_11996797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300027029\|Ga0208731_1002693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1569	Open in IMG/M
3300027166\|Ga0208729_112678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300027662\|Ga0208565_1127291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300027765\|Ga0209073_10235439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	707	Open in IMG/M
3300027825\|Ga0209039_10023272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3109	Open in IMG/M
3300027867\|Ga0209167_10119155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1365	Open in IMG/M
3300027879\|Ga0209169_10169742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300027911\|Ga0209698_10520392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300028381\|Ga0268264_10365721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1377	Open in IMG/M
3300028759\|Ga0302224_10141153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300028789\|Ga0302232_10615908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300028791\|Ga0307290_10052940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1464	Open in IMG/M
3300028795\|Ga0302227_10329837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300028801\|Ga0302226_10287668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300028824\|Ga0307310_10672875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300028877\|Ga0302235_10505934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300028906\|Ga0308309_10417414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300029943\|Ga0311340_10503431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300029951\|Ga0311371_10468268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300029999\|Ga0311339_10310909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1689	Open in IMG/M
3300029999\|Ga0311339_10765719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300030053\|Ga0302177_10094366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1739	Open in IMG/M
3300030056\|Ga0302181_10056452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2045	Open in IMG/M
3300030058\|Ga0302179_10281539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300030524\|Ga0311357_11361117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300030580\|Ga0311355_10352799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300030618\|Ga0311354_10399874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1386	Open in IMG/M
3300030739\|Ga0302311_10840309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300031236\|Ga0302324_102108868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300031525\|Ga0302326_11047154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1140	Open in IMG/M
3300031525\|Ga0302326_13542864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300031543\|Ga0318516_10097996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1655	Open in IMG/M
3300031546\|Ga0318538_10407798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300031546\|Ga0318538_10530654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	638	Open in IMG/M
3300031668\|Ga0318542_10627320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	561	Open in IMG/M
3300031679\|Ga0318561_10619843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	596	Open in IMG/M
3300031723\|Ga0318493_10887317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300031736\|Ga0318501_10404998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300031764\|Ga0318535_10258908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300031779\|Ga0318566_10648444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300031792\|Ga0318529_10134585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1131	Open in IMG/M
3300031797\|Ga0318550_10273589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300031890\|Ga0306925_10125286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2751	Open in IMG/M
3300031896\|Ga0318551_10835328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	536	Open in IMG/M
3300031897\|Ga0318520_10724300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300031939\|Ga0308174_10313134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M
3300031959\|Ga0318530_10354653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	608	Open in IMG/M
3300031962\|Ga0307479_11526281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300032001\|Ga0306922_11396142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	704	Open in IMG/M
3300032039\|Ga0318559_10216512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300032055\|Ga0318575_10322897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300032063\|Ga0318504_10148520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300032066\|Ga0318514_10207733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300032094\|Ga0318540_10548245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300032770\|Ga0335085_10738349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300032782\|Ga0335082_11362497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300032783\|Ga0335079_10188028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2297	Open in IMG/M
3300032783\|Ga0335079_12100547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300032892\|Ga0335081_10425066	Not Available	1699	Open in IMG/M
3300032893\|Ga0335069_10830832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300032895\|Ga0335074_10023765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8651	Open in IMG/M
3300034199\|Ga0370514_053599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.13%
Host-Associated	Host-Associated	7.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.40%
Plants	Host-Associated → Plants	7.87%
Aquatic	Environmental → Aquatic	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.65%
Peat	Environmental → Terrestrial → Peat	14.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.30%
Sediment	Environmental → Aquatic → Sediment	3.15%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.39%
Loam	Environmental → Terrestrial → Soil → Loam	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027166	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF033 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066086

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_02436260	2189573001	Grass Soil	RGQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPV
JGI12269J14319_100916473	3300001356	Peatlands Soil	RGQRSMYVTSPAGFTVVVTGNATWAQLRELAASLRPVAG*
Ga0070714_1020654991	3300005435	Agricultural Soil	SATPARGQRSMYRTSPAGVTLVVTGNATWPELRQLAASLSPA*
Ga0070714_1022352432	3300005435	Agricultural Soil	SATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPV*
Ga0070710_100705431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LSATPARGQRSMYVTSPAGFTIVVTGNASWAELRQLAASLRRVTAGI*
Ga0070665_1012059481	3300005548	Switchgrass Rhizosphere	QRSMYRTSPAGFTLVVTGNATWPELRQLAASLRPA*
Ga0066705_108456692	3300005569	Soil	AVSPAGFTVVVTGNAAWADLRLLAASLRPIAAGG*
Ga0066708_108590802	3300005576	Soil	RSMYRTSPAGFTLVVTGNATWSELRQLAASLRPI*
Ga0075017_1015440701	3300006059	Watersheds	GQRSMYVTSPAGFTVVVTGNATWAQLRELVASLRPVAG*
Ga0075015_1006164882	3300006102	Watersheds	TPARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLHPVAG*
Ga0075030_1004135022	3300006162	Watersheds	ATPSRGQRSMYVTSPDGFTLVVTGNATWAQLRELAASLRPVAG*
Ga0070716_1000149701	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0079222_118644161	3300006755	Agricultural Soil	TPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0066660_107415061	3300006800	Soil	LSTTPARGQRSMYRTSPAGFTLVVTGNASWSELRQLAASLRPA*
Ga0079220_102803102	3300006806	Agricultural Soil	ARGQRSMYRTSPAGFTLVVTGNATWLELRQLAASLHPA*
Ga0116221_14261252	3300009523	Peatlands Soil	MYVTSPAGFTVVVTGNATWAELRELAASLRPVAG*
Ga0116225_10341504	3300009524	Peatlands Soil	MYVTSPAGFTVVVTGNATWAELRELAASLRPVAAGA*
Ga0116225_14343082	3300009524	Peatlands Soil	ARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG*
Ga0105238_102715163	3300009551	Corn Rhizosphere	ARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0116223_100691161	3300009839	Peatlands Soil	TPSRGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG*
Ga0074046_103921651	3300010339	Bog Forest Soil	GQRSMYVTGPAGFTVVVTGNGTWAELRELAASLRPVAG*
Ga0074045_104763782	3300010341	Bog Forest Soil	MYVTSPAGFTVVVTGNATWAQLRELVASLRAVAG*
Ga0134128_106666451	3300010373	Terrestrial Soil	TPARGQRSMYRTSPAGFTLVITGNATWPELRQLAASLRPL*
Ga0134128_120523222	3300010373	Terrestrial Soil	MYVVSPAGFTVVVTGSATWADLRLLAASLRPATAGG*
Ga0126383_106797461	3300010398	Tropical Forest Soil	QRSMYVTSPAGFTVVVTGNASWAELRVLAASLRPVAAGV*
Ga0126361_107417374	3300010876	Boreal Forest Soil	SMYYTSATGRTVVVTGNASWAQLRQLAASLRPVGG*
Ga0105246_102036141	3300011119	Miscanthus Rhizosphere	QRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPV*
Ga0137365_101084601	3300012201	Vadose Zone Soil	ARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLRPA*
Ga0137378_101580421	3300012210	Vadose Zone Soil	ARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLREVAG*
Ga0137384_100597851	3300012357	Vadose Zone Soil	ARSQRSMYRTSLAGFTLVVTGNVTWAELRQLAASLRPI*
Ga0137361_113684751	3300012362	Vadose Zone Soil	GQRSMYVTSQAGFTVVVTGNATWAELRELAASLREVAG*
Ga0137359_114290951	3300012923	Vadose Zone Soil	MYVTSQAGFTVVVTGNATWAELRELAASLREVAG*
Ga0164307_106401292	3300012987	Soil	NLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0157372_122527661	3300013307	Corn Rhizosphere	LSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLYPA*
Ga0157372_130098661	3300013307	Corn Rhizosphere	PARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0157376_116411981	3300014969	Miscanthus Rhizosphere	QRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA*
Ga0182041_103831552	3300016294	Soil	RGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAARP
Ga0182035_111472422	3300016341	Soil	ARGQRSMYVTSPAGFTLVVTGNATWAELRELAASLRPVPGGG
Ga0187807_11894781	3300017926	Freshwater Sediment	PSRGQRSMYFTSPTGFTVVITGNATWAELRELAASLRTLSS
Ga0187779_103492611	3300017959	Tropical Peatland	TTPARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVPART
Ga0187781_110371671	3300017972	Tropical Peatland	QRSMYFTSPAGFTVVITGNATWAELRELAASLRPVSS
Ga0187780_108671862	3300017973	Tropical Peatland	STPARDQRSMYLTSPAGFTVVVTGNATWAQLRELAAALRPVAR
Ga0187780_114793682	3300017973	Tropical Peatland	VSATPSRGQRSMYFTSPAGFTVVITGNATWAELRELAASLRTVSSRARAG
Ga0187772_102200822	3300018085	Tropical Peatland	SMYFTSPAGFTVVITGNATWAELRELAASLRTLSS
Ga0187772_103709521	3300018085	Tropical Peatland	QRSMYLTSPAGFTLVVTGNATWAQLRELAASLRPVARRARRTG
Ga0187772_112356342	3300018085	Tropical Peatland	SMYFTSPAGFTVVITGNATWVELRELAASLRTVSSRARAG
Ga0066662_101024774	3300018468	Grasslands Soil	FSTAPARGQRSLSATSPAGFSVVVTGNATWADLRLLAASLRRVTAGG
Ga0066669_102368541	3300018482	Grasslands Soil	TPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPARTPPAHRLLHPA
Ga0210408_100642053	3300021178	Soil	TPARGQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPVS
Ga0210388_103516872	3300021181	Soil	GQRSLYFTGAAGLVVVVTGNATWAQLRQLAASLHPADASLRPLAG
Ga0213881_1000170013	3300021374	Exposed Rock	QRSVYFTSPAGFTVVVTGNATWAQLRQLAASLRPVGR
Ga0210397_103957401	3300021403	Soil	ARGQRSMYLTSPAGFTVVVTGNATWAELRELAASLRPVAA
Ga0210389_102407373	3300021404	Soil	GQRSMYLTSAAGFTVVVTGNASWAELRELAAALRPVAR
Ga0210389_108832202	3300021404	Soil	TNTPSRGQRSLYFTGAAGLVVVVTGNATWAQLRQLAASLHPVAG
Ga0210386_105381131	3300021406	Soil	RGQRSLAVTSPAGVTLVVTGNASWAQLRTLAASLRTEG
Ga0210384_103558132	3300021432	Soil	GQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPV
Ga0210384_105048281	3300021432	Soil	GQRSLYLTSPAGFTVVVTGNATWPELRQLAASLRPVS
Ga0207699_105097131	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207693_110429922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207700_114278541	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RGQRSMYVTSPAGFTIVVTGNASWAELRQLAASLRRVTAGI
Ga0207664_104585482	3300025929	Agricultural Soil	ARGQRSMYAVSPAGFTVVVTGSASWADLRLLAASLRPVVAGG
Ga0207651_119874122	3300025960	Switchgrass Rhizosphere	NLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207668_102102263	3300025972	Switchgrass Rhizosphere	RGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0207677_119967972	3300026023	Miscanthus Rhizosphere	NLSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLRPA
Ga0208731_10026933	3300027029	Forest Soil	SQRSMYLTSAAGFTVVVTGNASWAELRELAAVLCPVAR
Ga0208729_1126781	3300027166	Forest Soil	QRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0208565_11272911	3300027662	Peatlands Soil	SMYVTSPAGFTVVVTGNATWAELRELAASLRPVAG
Ga0209073_102354392	3300027765	Agricultural Soil	YVVSPAGFTVVVTGSATWADLRLLAASLRPVSPER
Ga0209039_100232721	3300027825	Bog Forest Soil	WGQRSMYVTGPAGFTVVVTGNGTWAELRELAASLRPVAG
Ga0209167_101191551	3300027867	Surface Soil	LTAAPDRGQRSMYLTSAAGVTLVVTGNATWAQLRRLAASLRPVAR
Ga0209169_101697422	3300027879	Soil	RSLYYTSATGRTLVVTGNASWAQLRELAASLHPVTA
Ga0209698_105203921	3300027911	Watersheds	LSATPSRGQRSMYVTSPDGFTLVVTGNATWAQLRELAASLRPVAG
Ga0268264_103657211	3300028381	Switchgrass Rhizosphere	ARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPA
Ga0302224_101411531	3300028759	Palsa	NRPVVARGQRSMYLTSPAGFTLVVTGNATWAQRRELAAALYPVAR
Ga0302232_106159082	3300028789	Palsa	YLNSAPSRGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPVTA
Ga0307290_100529402	3300028791	Soil	LSATPARGQRSMYRTSPAGFTLVVTGNATWPELRQLAASLHPSDRARSDQSDKRDK
Ga0302227_103298372	3300028795	Palsa	TPSRGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPVTA
Ga0302226_102876682	3300028801	Palsa	LSRGQRSMYYTSTTGVTVVVTGNATWAQLRELAASLHPVTT
Ga0307310_106728751	3300028824	Soil	NLSATSARGQRSMYRTSPAGFTLVVTGNASWAELRQLAASLRSV
Ga0302235_105059341	3300028877	Palsa	SLFYTSPAGFTLVVSGNASWNELRELAASLRPAAA
Ga0308309_104174142	3300028906	Soil	SMYLTSAAGFTLVVTGNASWAELRELAAALRPVAR
Ga0311340_105034311	3300029943	Palsa	SSTPSLGQRSMYYTSSAGRTVVVTGNATWAQLRELAASLHPVTA
Ga0311371_104682681	3300029951	Palsa	SMYYTSTTGVTVVVTGNATWAQLRELAASLHPVTT
Ga0311339_103109091	3300029999	Palsa	SRGQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPATA
Ga0311339_107657191	3300029999	Palsa	LSATPSRGQRSLFYTSPAGFTLVVSGNATWDELRELAASLRPAAA
Ga0302177_100943663	3300030053	Palsa	SAPSRGQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0302181_100564521	3300030056	Palsa	RGQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0302179_102815391	3300030058	Palsa	SATPSRGQRSLFYTSPAGFTLVVSGNATWDELRELAASLRPAAA
Ga0311357_113611171	3300030524	Palsa	WHLNSAPSRGQRSMYYTSATGRTIVVTGSATWTQLGELAASLHPVTG
Ga0311355_103527993	3300030580	Palsa	GQRSMYYTSATGRTVVVTGNATWAQLRELAASLHPVTA
Ga0311354_103998741	3300030618	Palsa	NSAPSRGQRSMYYTSTTGVTVVVTGNATWAQLRELAASLHPVTT
Ga0302311_108403091	3300030739	Palsa	LSATPSRGQRSLFYTSPAGFTLVVSGNATWDELRELAASLRPTAA
Ga0302324_1021088682	3300031236	Palsa	MYFTSAAGRFTVVVTGNATWTQLRELAASLHPAAG
Ga0302326_110471542	3300031525	Palsa	WHLNSAPSRGQRSMYYTSSAGRTVVVTGNATWAQLSELAASLHPVTT
Ga0302326_135428641	3300031525	Palsa	LDPAPSRGQRSLSYTSPAGFTLVVTGTATWAQLRQLAASLRPAR
Ga0318516_100979964	3300031543	Soil	SMYLASPAGFTLVVTGDATWAELRELAASLRPVAR
Ga0318538_104077982	3300031546	Soil	PARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAARP
Ga0318538_105306541	3300031546	Soil	SVSATPSRNQRSMYFASPAGFTVVVTGNATWAELRELAASLRPLSS
Ga0318542_106273201	3300031668	Soil	SMYLTSPAGFTVVVTGNAGWAELRRLAASLRPVAARP
Ga0318561_106198431	3300031679	Soil	VSATPSRHQRSMYFASPAGFTVVVTGNATWAELRELAAWLRPLSS
Ga0318493_108873172	3300031723	Soil	LTVTPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPIAARP
Ga0318501_104049982	3300031736	Soil	TPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAGGV
Ga0318535_102589081	3300031764	Soil	MYLTSPAGFTVVVTGNAGWAELRQLVASLRPVAARP
Ga0318566_106484442	3300031779	Soil	REPGPAGFTVVVTGNATWTEQRELAASLRPVAAGG
Ga0318529_101345852	3300031792	Soil	MYLTSPAGFTVVVTGNAEWAELRQLAASLRPVAARP
Ga0318550_102735891	3300031797	Soil	TPARGQRSMYLTSPAGFTVVVTGNAEWAELRQLAASLRPVAARP
Ga0306925_101252861	3300031890	Soil	WSVSATPSRNQRSMYFASPAGFTVVVTGNATWAELRELAASLRPLSS
Ga0318551_108353282	3300031896	Soil	LSATPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLVASLRPVAARP
Ga0318520_107243002	3300031897	Soil	MYRVSPAGFTVVITGNATWAELRQLAASLRPVAGGG
Ga0308174_103131341	3300031939	Soil	ATPARGQRSMYVISPAGFTVVVTGSATWADLRLLAASLRPVAARG
Ga0318530_103546531	3300031959	Soil	SVSATPSRNQRSMYFASPAGFTVVVTGDATWAELRELAASLRPLSS
Ga0307479_115262811	3300031962	Hardwood Forest Soil	TMYVTSPAGFTVVVTGNASWAELRELAASLRPVAAGA
Ga0306922_113961421	3300032001	Soil	SVSATPSRHQRSMYFASPAGFTVVVTGNATWAELRELAASLRPLSS
Ga0318559_102165121	3300032039	Soil	SMYLTSPAGFTVVVTGNAEWAELRQLAASLRPVAARP
Ga0318575_103228972	3300032055	Soil	RSMYLTSPAGFTVVVTGNAGWAELRRLAASLRPVAARP
Ga0318504_101485202	3300032063	Soil	ATPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAGGV
Ga0318514_102077331	3300032066	Soil	ARGQRSMYLASPAGFTLVVTGDATWAELRELAASLRPVAR
Ga0318540_105482451	3300032094	Soil	VNPARGQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAGGV
Ga0311301_113244693	3300032160	Peatlands Soil	DQRSLYETDPAGATIVITGNASWAQLRVLAASLRPVTPEG
Ga0335085_107383492	3300032770	Soil	PARGQRSMYLTSPAGFTLVVTGNAGWAELRQLATSLRPVAARP
Ga0335082_113624971	3300032782	Soil	GQRSMYLTSPAGFTVVVTGNAGWAELRQLAASLRPVAARP
Ga0335079_101880281	3300032783	Soil	GQRSMYRTSPAGFTLVVTGNATWAELRQLAASLRPV
Ga0335079_121005472	3300032783	Soil	TPARGQRSMYVTSPAGFTVVVTGNATWAELRELAASLRPVPGGG
Ga0335081_104250663	3300032892	Soil	NVGRAQRSLYRTERDGGTLIVTGNATWAQLRVLAASLRVQPRS
Ga0335069_108308321	3300032893	Soil	ARGQRSMYRTSPAGYTVVVTGTAGWAELRQLAASLRPIAARS
Ga0335074_100237651	3300032895	Soil	TPSRGQRSMYLAGAGFTIVVTGNATWAELRQLAASLRPLSR
Ga0370514_053599_881_1012	3300034199	Untreated Peat Soil	STPSRGQRSMYYTSPAGCTVVVTGNATWAQLRQLAASLHPVTG

Hidden Markov Model


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