Metagenome / Metatranscriptome Family F066084

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066084
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	57 residues
Representative Sequence	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
Number of Associated Samples	110
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.08 %
% of genes near scaffold ends (potentially truncated)	37.01 %
% of genes from short scaffolds (< 2000 bps)	81.89 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.827 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (18.898 % of family members)
Environment Ontology (ENVO)	Unclassified (24.409 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.62% β-sheet: 0.00% Coil/Unstructured: 77.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01850	PIN	16.54
PF02782	FGGY_C	11.02
PF00293	NUDIX	9.45
PF07110	EthD	5.51
PF00300	His_Phos_1	2.36
PF00795	CN_hydrolase	1.57
PF13199	Glyco_hydro_66	1.57
PF00144	Beta-lactamase	1.57
PF00561	Abhydrolase_1	1.57
PF04166	PdxA	0.79
PF01425	Amidase	0.79
PF14310	Fn3-like	0.79
PF00171	Aldedh	0.79
PF00291	PALP	0.79
PF00391	PEP-utilizers	0.79
PF13358	DDE_3	0.79
PF13424	TPR_12	0.79
PF00589	Phage_integrase	0.79
PF01326	PPDK_N	0.79
PF01243	Putative_PNPOx	0.79
PF08281	Sigma70_r4_2	0.79
PF00583	Acetyltransf_1	0.79
PF03795	YCII	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.57
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.57
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.57
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.79
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.79
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.79
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.79
COG1995	4-hydroxy-L-threonine phosphate dehydrogenase PdxA	Coenzyme transport and metabolism [H]	0.79
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.61 %
Unclassified	root	N/A	13.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.61 %
Unclassified	root	N/A	13.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.83 %
Unclassified	root	N/A	13.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.23 %
Unclassified	root	N/A	13.39 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	71.65 %
Unclassified	root	N/A	13.39 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	51.18 %
Unclassified	root	N/A	13.39 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.15 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.57 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Methanocellales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.15 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.57 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.57 %
Beutenbergiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Beutenbergiaceae	0.79 %
Methanocellaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae	0.79 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.15 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.57 %
Beutenbergia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Beutenbergiaceae → Beutenbergia	0.79 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.79 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.15 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.57 %
Beutenbergia cavernae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Beutenbergiaceae → Beutenbergia → Beutenbergia cavernae	0.79 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.79 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.39 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.15 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.57 %
Beutenbergia cavernae DSM 12333	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Beutenbergiaceae → Beutenbergia → Beutenbergia cavernae → Beutenbergia cavernae DSM 12333	0.79 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.79 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102FTLFU	Not Available	509	Open in IMG/M
2199352024\|deeps__Contig_123345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
2199352025\|deepsgr__Contig_150734	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300003659\|JGI25404J52841_10019611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1465	Open in IMG/M
3300004082\|Ga0062384_100347853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300005327\|Ga0070658_10680673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	893	Open in IMG/M
3300005328\|Ga0070676_11315791	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005333\|Ga0070677_10580343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300005334\|Ga0068869_100272883	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005340\|Ga0070689_101150879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300005345\|Ga0070692_10757940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300005353\|Ga0070669_101153755	Not Available	668	Open in IMG/M
3300005439\|Ga0070711_101452762	Not Available	597	Open in IMG/M
3300005459\|Ga0068867_102218271	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005537\|Ga0070730_10079105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2305	Open in IMG/M
3300005542\|Ga0070732_10016219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	4160	Open in IMG/M
3300005563\|Ga0068855_100779386	Not Available	1018	Open in IMG/M
3300005591\|Ga0070761_10086922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1788	Open in IMG/M
3300005591\|Ga0070761_10509967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	742	Open in IMG/M
3300005602\|Ga0070762_10078183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Beutenbergiaceae → Beutenbergia → Beutenbergia cavernae → Beutenbergia cavernae DSM 12333	1876	Open in IMG/M
3300005602\|Ga0070762_10209532	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005602\|Ga0070762_10684832	Not Available	687	Open in IMG/M
3300005610\|Ga0070763_10335106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300005843\|Ga0068860_102646760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300005921\|Ga0070766_11102374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300006173\|Ga0070716_100083562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1912	Open in IMG/M
3300006755\|Ga0079222_10242912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1125	Open in IMG/M
3300006852\|Ga0075433_11393661	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300006881\|Ga0068865_100160426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1715	Open in IMG/M
3300007076\|Ga0075435_100099403	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300007255\|Ga0099791_10222060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	893	Open in IMG/M
3300009036\|Ga0105244_10444185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300009090\|Ga0099827_10549049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	994	Open in IMG/M
3300009156\|Ga0111538_12245141	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009174\|Ga0105241_11034802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300009545\|Ga0105237_10686983	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300009545\|Ga0105237_10707202	Not Available	1014	Open in IMG/M
3300009628\|Ga0116125_1202868	Not Available	564	Open in IMG/M
3300010154\|Ga0127503_10024250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	835	Open in IMG/M
3300010359\|Ga0126376_10754413	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300010373\|Ga0134128_12804945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300010859\|Ga0126352_1249598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300010865\|Ga0126346_1374975	Not Available	595	Open in IMG/M
3300011120\|Ga0150983_12671520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300012380\|Ga0134047_1096791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300012469\|Ga0150984_105290993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300012500\|Ga0157314_1045711	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300012951\|Ga0164300_10028694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2018	Open in IMG/M
3300012955\|Ga0164298_10856144	Not Available	656	Open in IMG/M
3300012960\|Ga0164301_10265161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300012961\|Ga0164302_11769200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300012988\|Ga0164306_11277147	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012989\|Ga0164305_10052361	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300014168\|Ga0181534_10716747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300014201\|Ga0181537_10219692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300014492\|Ga0182013_10000479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56030	Open in IMG/M
3300014493\|Ga0182016_10539831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300014501\|Ga0182024_12109389	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300014501\|Ga0182024_12461424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300015242\|Ga0137412_10540480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	888	Open in IMG/M
3300015372\|Ga0132256_100990510	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300015373\|Ga0132257_101218787	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300017926\|Ga0187807_1063411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1149	Open in IMG/M
3300017946\|Ga0187879_10190506	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1152	Open in IMG/M
3300017961\|Ga0187778_10122527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1627	Open in IMG/M
3300018042\|Ga0187871_10006134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8687	Open in IMG/M
3300018044\|Ga0187890_10762162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300018431\|Ga0066655_10769973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	654	Open in IMG/M
3300020069\|Ga0197907_10901436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300020070\|Ga0206356_11486026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1365	Open in IMG/M
3300020075\|Ga0206349_1131549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300020582\|Ga0210395_10097480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300020582\|Ga0210395_10344910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1120	Open in IMG/M
3300020582\|Ga0210395_10680413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300020583\|Ga0210401_10475143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1113	Open in IMG/M
3300021401\|Ga0210393_11311813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300021402\|Ga0210385_10355544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1095	Open in IMG/M
3300021402\|Ga0210385_10948309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300021474\|Ga0210390_10131270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2104	Open in IMG/M
3300022467\|Ga0224712_10024903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2097	Open in IMG/M
3300022522\|Ga0242659_1051864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300023101\|Ga0224557_1000077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	107404	Open in IMG/M
3300025898\|Ga0207692_10051306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2091	Open in IMG/M
3300025898\|Ga0207692_10409225	Not Available	847	Open in IMG/M
3300025908\|Ga0207643_10011562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4767	Open in IMG/M
3300025911\|Ga0207654_10757008	Not Available	700	Open in IMG/M
3300025914\|Ga0207671_11132859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300025915\|Ga0207693_10421689	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300025938\|Ga0207704_10493910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300025960\|Ga0207651_10441378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1115	Open in IMG/M
3300026095\|Ga0207676_12519578	Not Available	511	Open in IMG/M
3300026467\|Ga0257154_1018407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1003	Open in IMG/M
3300026551\|Ga0209648_10069859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2957	Open in IMG/M
3300027842\|Ga0209580_10024333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2719	Open in IMG/M
3300027853\|Ga0209274_10722227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300027884\|Ga0209275_10521400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300027908\|Ga0209006_10203556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300028742\|Ga0302220_10042199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1964	Open in IMG/M
3300028780\|Ga0302225_10333374	Not Available	717	Open in IMG/M
3300028879\|Ga0302229_10052501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2026	Open in IMG/M
3300029943\|Ga0311340_10144168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2508	Open in IMG/M
3300029943\|Ga0311340_10444056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1177	Open in IMG/M
3300029943\|Ga0311340_10506792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1077	Open in IMG/M
3300029943\|Ga0311340_10910528	Not Available	730	Open in IMG/M
3300029944\|Ga0311352_10057166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3535	Open in IMG/M
3300029951\|Ga0311371_11326490	Not Available	818	Open in IMG/M
3300029999\|Ga0311339_10995082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300030056\|Ga0302181_10292604	Not Available	725	Open in IMG/M
3300030399\|Ga0311353_10129432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2427	Open in IMG/M
3300030399\|Ga0311353_10300887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1470	Open in IMG/M
3300030490\|Ga0302184_10239187	Not Available	747	Open in IMG/M
3300030503\|Ga0311370_10626794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1282	Open in IMG/M
3300030509\|Ga0302183_10150419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914	Open in IMG/M
3300030509\|Ga0302183_10228061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300030520\|Ga0311372_10156784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3925	Open in IMG/M
3300030580\|Ga0311355_10477502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300030677\|Ga0302317_10055359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1978	Open in IMG/M
3300030739\|Ga0302311_10046871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3755	Open in IMG/M
3300030739\|Ga0302311_10186103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1586	Open in IMG/M
3300031236\|Ga0302324_100293497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2499	Open in IMG/M
3300031525\|Ga0302326_10622910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1598	Open in IMG/M
3300032205\|Ga0307472_100212174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1483	Open in IMG/M
3300032205\|Ga0307472_102467064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300032805\|Ga0335078_10165857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3108	Open in IMG/M
3300032805\|Ga0335078_10982414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1002	Open in IMG/M
3300032828\|Ga0335080_10344652	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	1608	Open in IMG/M
3300032898\|Ga0335072_10478026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1301	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.74%
Host-Associated	Host-Associated	21.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.65%
Plants	Host-Associated → Plants	21.26%
Aquatic	Environmental → Aquatic	7.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.97%
Peat	Environmental → Terrestrial → Peat	19.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.66%
Freshwater	Environmental → Aquatic → Freshwater	7.09%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.68%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.51%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	18.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.57%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_06128650	2189573001	Grass Soil	DTSLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRPFLGAILDS
deeps_02228170	2199352024	Soil	MSDPEVHVPASGAATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
deepsgr_02477350	2199352025	Soil	MSDPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDP
JGI25404J52841_100196112	3300003659	Tabebuia Heterophylla Rhizosphere	MSGPETHEPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0062384_1003478532	3300004082	Bog Forest Soil	MSDPEAHVPASRGATLERSRKDVLDAARPLPLGEDVVIEELSDEEDRLFLAAILDV*
Ga0070658_106806731	3300005327	Corn Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEKEDRLFLGAILDS*
Ga0070676_113157911	3300005328	Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0070677_105803432	3300005333	Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0068869_1002728831	3300005334	Miscanthus Rhizosphere	ADISLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0070689_1011508792	3300005340	Switchgrass Rhizosphere	ISLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0070692_107579401	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0070669_1011537552	3300005353	Switchgrass Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVMRDLSEEEDRLFLG
Ga0070711_1014527621	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0068867_1022182712	3300005459	Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAI
Ga0070730_100791052	3300005537	Surface Soil	MSDPEAHVPASRGTTLERSRQAVLDAARPLPPDEDVVIDELSEDEDRLFLAAILDS*
Ga0070732_100162194	3300005542	Surface Soil	MSDPEAHVPASRGTTLERSRQAVLDAARPLPPDEDVVNDELSEDEDRLFLAAILDS*
Ga0068855_1007793862	3300005563	Corn Rhizosphere	EDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0070761_100869222	3300005591	Soil	MSGPEAYVPAADGSTLERSREDVLEAARPLPPDEDVVIEDLSDDEDRRFLAVILDS*
Ga0070761_105099671	3300005591	Soil	MSDSQAHVPASCGATLERSREDVLDAARPLPSDEDVVIEDLSDDEDRLFLAAILDV*
Ga0070762_100781832	3300005602	Soil	MSGPEAYLSACNGTTLERSREDVLGAARPLPPDEDVVIEELSDDEDRRFLAVILDS*
Ga0070762_102095322	3300005602	Soil	LEVGNAISGPEAYVAAADGITLERSREDVLEAARPLPPDEDVVIEELSDDEDRQFLAVILDS*
Ga0070762_106848321	3300005602	Soil	MSDPEAHVPASRGATLERSREDVLDAARPLPLGEDVVIEELSDEEDRLFLAAILDV*
Ga0070763_103351062	3300005610	Soil	MSGPEAYLSACNGTTLERSREDVLGAARPLPPDEDVVIEELSDDEDSRFLAVILDS*
Ga0068860_1026467601	3300005843	Switchgrass Rhizosphere	QGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0070766_111023741	3300005921	Soil	EAYLSACNGTTLERSREDVLGAARPLPPDEDVVIEELSDDEDSRFLAVILDS*
Ga0070716_1000835623	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVRGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0079222_102429123	3300006755	Agricultural Soil	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEENRLFLGPILDS*
Ga0075433_113936612	3300006852	Populus Rhizosphere	MSGPEAHVPASGVAALERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0068865_1001604264	3300006881	Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEKEDRLFLEAILDS*
Ga0075435_1000994032	3300007076	Populus Rhizosphere	MSGPEAHVPASGVAALERSREDVLGAARPFPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0099791_102220602	3300007255	Vadose Zone Soil	VAVISNRCSLVEREEVAMSEPGARRPDVKGTTLERQRSEVLDAARPLPPDEDVLIGELTDEEDRLFLAAILDA*
Ga0105244_104441852	3300009036	Miscanthus Rhizosphere	MSGPETHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0099827_105490491	3300009090	Vadose Zone Soil	MSDPEAHVPASRGTTLERSKQAVLDAARPLPPDEDVIIEELSEDVDRLFLAAILDS*
Ga0111538_122451411	3300009156	Populus Rhizosphere	MSGPEAHVPASGVATLDRSREDVLGAARPLPPDEDVVIRDLSEEED
Ga0105241_110348022	3300009174	Corn Rhizosphere	SLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEKEDRLFLGAILDS*
Ga0105237_106869831	3300009545	Corn Rhizosphere	LMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0105237_107072022	3300009545	Corn Rhizosphere	ISLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0116125_12028681	3300009628	Peatland	MSGPEAYVSASDGTTLERSREDVLEAARRLPPDEDVVIEELSDDEDRRFLAVILDS*
Ga0127503_100242502	3300010154	Soil	MQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0126376_107544131	3300010359	Tropical Forest Soil	MSGPEAHEPASGVATLERSREDVLGAARPLPPDEDVVIMELSEEEDRLFLGAILDS*
Ga0134128_128049452	3300010373	Terrestrial Soil	IAAADISLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0126352_12495981	3300010859	Boreal Forest Soil	SGPEAHVPSSGSTTLERSREDVLKAARPLPPDEDVVIEELSDDEDRLFLAVIFDS*
Ga0126346_13749752	3300010865	Boreal Forest Soil	VRDAMSDSEAHVPASRGITLERSREDVLDTARPLPLGEDVVIEELSDEEDRLFLAAIFDV
Ga0150983_126715202	3300011120	Forest Soil	SAMSGPEAYLSACNGTTLERSREDVLGAARPLPPDEDVVIEELSDDEDSRFLAVILDS*
Ga0134047_10967911	3300012380	Grasslands Soil	AMSDPEVHVPASGAATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0150984_1052909932	3300012469	Avena Fatua Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0157314_10457112	3300012500	Arabidopsis Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVITELSEEEDRLFLGAILNS*
Ga0164300_100286944	3300012951	Soil	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0164298_108561442	3300012955	Soil	AMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0164301_102651611	3300012960	Soil	MQGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRELSEEEDRLFLGAILDS*
Ga0164302_117692002	3300012961	Soil	MPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0164306_112771472	3300012988	Soil	MSGPEAHMPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS*
Ga0164305_100523612	3300012989	Soil	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEADRLFLGAILDS*
Ga0181534_107167471	3300014168	Bog	MSGPEAYLPASDGTTMERSREDVLDAARPLPPDEDVVIEELSDDEDRRFLAVILDS*
Ga0181537_102196923	3300014201	Bog	MSGPEAYLPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRRFLAVILDS*
Ga0182013_1000047915	3300014492	Bog	MAGPEAYVLASGGTTLERSREEVLEATRPLPPDEDVVIEELSDDEDRLFLAVILDS*
Ga0182016_105398311	3300014493	Bog	MAGPEAYVLASGGTTLERSREEVLEATRPLPPDEDVVIEELSDDEDRRFLAVIFDS*
Ga0182024_121093892	3300014501	Permafrost	SDGTTLERSREDVLEAARPLPPDEGVVIKELSDDEDRRFLAVILDS*
Ga0182024_124614241	3300014501	Permafrost	MSGPEAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVMLDS*
Ga0137412_105404802	3300015242	Vadose Zone Soil	PEAHIPVSGGTTLERSREDVLSAARPLPPDEDVVIEDLSEAEDRLFLGAILDS*
Ga0132256_1009905101	3300015372	Arabidopsis Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILNS*
Ga0132257_1012187873	3300015373	Arabidopsis Rhizosphere	MQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVITELSEEEDRLFLGAILDS*
Ga0187807_10634112	3300017926	Freshwater Sediment	MSDPEAYVPASSGATLERSREDVLDAARPLPLGEDVVIEDLSDEEDRLFLAAILDV
Ga0187879_101905061	3300017946	Peatland	MSGPEAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0187778_101225271	3300017961	Tropical Peatland	MSGPEAHVPASGEAALEGSKDDVLDAARPLPTDDDMAIENLSDEKGPPVPGRDA
Ga0187871_100061343	3300018042	Peatland	MSDPEAQVPVGRGATLERSREDVLDAARPLPLGEDVVIEELSDEEDRLFLAAILDV
Ga0187890_107621622	3300018044	Peatland	MSGPEAYVPASDGITLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0066655_107699733	3300018431	Grasslands Soil	MSGPEAHEPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEED
Ga0197907_109014362	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0206356_114860262	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS
Ga0206349_11315492	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0210395_100974805	3300020582	Soil	MPASRVATLERSKEDVLDTARPLPPDEDVVIEDLSDEEDRLFLAAILNG
Ga0210395_103449101	3300020582	Soil	MSGPEAYLSACNGTTLERSREDVLGAARPLPPDEDVVIEELSDDEDSRFLAVILDS
Ga0210395_106804132	3300020582	Soil	MSGPEAYVPAADGSTLERSREDVLEAARPLPPDEDVVIEDLSDDEDRRFLAVILDS
Ga0210401_104751432	3300020583	Soil	MSDPEAHVPASRGATLERSREDVLDAARPLPLGEDVVIEELSDEEDRLFLAAILDV
Ga0210393_113118132	3300021401	Soil	YPGCEEVRIAMSDPEAYRPASRGLSLERSREEVLDAARPLPPDKDVVIEELSEDEDRLFLAAILDS
Ga0210385_103555442	3300021402	Soil	GISWCQEVRDAMSDPEAHVPASRGATLERSREDVLDAARPLPLGEDVVIEELSDEEDRLFLAAILDV
Ga0210385_109483092	3300021402	Soil	MSDPEAHVPASRAATLERSKEDVLDAARPLPPDDDVVIEDLSDEEDRLFLAAILNG
Ga0210390_101312702	3300021474	Soil	MPASRAATLERSKEDVLDTARPLPPDEDVVIEDLSDEEDRLFLAAILNG
Ga0224712_100249034	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVRGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0242659_10518642	3300022522	Soil	AMSGPEAYLSACNGTTLERSREDVLGAARPLPPDEDVVIEELSDDEDSRFLAVILDS
Ga0224557_100007766	3300023101	Soil	MAGPEAYVLASGGTTLERSREEVLEATRPLPPDEDVVIEELSDDEDRLFLAVILDS
Ga0207692_100513064	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEKEDRLFLGAILD
Ga0207692_104092252	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LMQGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS
Ga0207643_100115624	3300025908	Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0207654_107570082	3300025911	Corn Rhizosphere	SLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS
Ga0207671_111328592	3300025914	Corn Rhizosphere	QGGEDAMSGPEAHVPASGVATLERSREDVRGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0207693_104216891	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ISLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0207704_104939101	3300025938	Miscanthus Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRELSEKEDRLFLEAILDS
Ga0207651_104413782	3300025960	Switchgrass Rhizosphere	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVIRDLSEEEDRLFLGAILDS
Ga0207676_125195781	3300026095	Switchgrass Rhizosphere	MQGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRDLSEEEDRLFLGAILDS
Ga0257154_10184073	3300026467	Soil	MSGPEAYLSARNGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDSRFLAVILDS
Ga0209648_100698594	3300026551	Grasslands Soil	MSDPGAHAPASRGTSLERSREDVLGAARPLPPDEDVVIEELSDEEDRLFLAAILDS
Ga0209580_100243335	3300027842	Surface Soil	VRGALGIPSCEEVRDAMSDPEAHVPASRGTTLERSRQAVLDAARPLPPDEDVVNDELSEDEDRLFLAAILDS
Ga0209274_107222271	3300027853	Soil	MSDSQAHVPASCGATLERSREDVLDAARPLPSDEDVVIEDLSDDEDRLFLAAILDV
Ga0209275_105214001	3300027884	Soil	LEVGNAISGPEAYVAAADGITLERSREDVLEAARPLPPDEDVVIEELSDDEDRQFLAVILDS
Ga0209006_102035563	3300027908	Forest Soil	MSDLEAHVPASRGVTLERSREDVLDAARPLSLGEDVVIEELSDQEDRLFLTAILDV
Ga0302220_100421992	3300028742	Palsa	MSGPEAYVPASHGSTLERSREDVLEAARPLPPDDDVVIEELSDDEDRRFLAVILDS
Ga0302225_103333741	3300028780	Palsa	MSGPEAYVPASDSTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVIFDS
Ga0302229_100525014	3300028879	Palsa	MSGPEAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLA
Ga0311340_101441686	3300029943	Palsa	MSGPEAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFL
Ga0311340_104440561	3300029943	Palsa	MSGPEAYVPAGDGSTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVILDP
Ga0311340_105067923	3300029943	Palsa	PEVYLPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0311340_109105283	3300029943	Palsa	EAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0311352_100571665	3300029944	Palsa	MSGPEAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDE
Ga0311371_113264901	3300029951	Palsa	MSGPEAYLPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRR
Ga0311339_109950822	3300029999	Palsa	MSGPEAYLPASDGTTLERSREDVLDAARPLPSDEDVVIEELSDDEDRRFLAVILDS
Ga0302181_102926042	3300030056	Palsa	MSGPEAYLPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0311353_101294322	3300030399	Palsa	MSGPEAYVPASDGTTLERSREDVLEAARPLPPEEDVVIEELSDDEDRRFLAVILDS
Ga0311353_103008871	3300030399	Palsa	AMSGPEAYVPASDSTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVIFDS
Ga0302184_102391871	3300030490	Palsa	MSGPEAYLPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDR
Ga0311370_106267943	3300030503	Palsa	MSGPEVYLPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0302183_101504192	3300030509	Palsa	EAYVPASHGSTLERSREDVLEAARPLPPDDDVVIEELSDDEDRRFLAVILDS
Ga0302183_102280611	3300030509	Palsa	MSGPEAYVPASHGSTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0311372_101567845	3300030520	Palsa	MSGPEAYVPASDGTTLERSREDVFEAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0311355_104775023	3300030580	Palsa	MSGPEAYVPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRRFLAVILDS
Ga0302317_100553593	3300030677	Palsa	VPASHGSTLERSREDVLEAARPLPPDDDVVIEELSDDEDRRFLAVILDS
Ga0302311_100468711	3300030739	Palsa	GPEAYVPASHGSTLERSREDVLEAARPLPPDDDVVIEELSDDEDRRFLAVILDS
Ga0302311_101861032	3300030739	Palsa	MSGPEAYVPASDGTTLERSREDVLDAARPLPPDEDVVIEELSDDEDRR
Ga0302324_1002934974	3300031236	Palsa	MSGPEAYVPASDGTTLERSREDVLEAARPLPPDEDVVIEELSDDEDRRVLAVILDS
Ga0302326_106229102	3300031525	Palsa	MSELEAHEPASDGGTLERSREDVLDAARPLPSGNEMVIEELSDDEDRIFVATILDQ
Ga0307472_1002121742	3300032205	Hardwood Forest Soil	SLMQGGEDAMSGPEAHVPASGVATLERSREDVLGAALPLPPDEDVVIRELSEEEDRLFLGAILDS
Ga0307472_1024670641	3300032205	Hardwood Forest Soil	MSGPEANVPASGVATLERSREDVLGAARPLPPDEDVVIRDLSEEEDRLFLGAILDS
Ga0335078_101658576	3300032805	Soil	MSEPEAHVPPSRGATLERSRQEVLEAARPLPADEDVVIEDLSDEEDRLFLAAIFEV
Ga0335078_109824142	3300032805	Soil	MPDPEVHAPASRGATLERSREDVLDAARPLPPDKDVVIEELSDEEDRLFLAAILDL
Ga0335080_103446523	3300032828	Soil	MSEPEAHVPPSRGATLERSRQEVLEAARPLPADEDVVIEDLSDEEDRLFLAAIF
Ga0335072_104780261	3300032898	Soil	MSGPEAHVPASGVATLERSREDVLGAARPLPPDEDVVITELSEEEDRLFLGAILDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066084

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences