Metagenome / Metatranscriptome Family F066075

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066075
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	75 residues
Representative Sequence	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFASQVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTS
Number of Associated Samples	106
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.40 %
% of genes near scaffold ends (potentially truncated)	96.06 %
% of genes from short scaffolds (< 2000 bps)	92.13 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.780 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.386 % of family members)
Environment Ontology (ENVO)	Unclassified (24.409 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.244 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.70% β-sheet: 8.49% Coil/Unstructured: 69.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF06150	ChaB	2.36
PF14019	DUF4235	2.36
PF13411	MerR_1	1.57
PF01841	Transglut_core	1.57
PF03441	FAD_binding_7	1.57
PF01479	S4	1.57
PF01381	HTH_3	1.57
PF01408	GFO_IDH_MocA	1.57
PF00378	ECH_1	1.57
PF05239	PRC	1.57
PF03466	LysR_substrate	0.79
PF00376	MerR	0.79
PF02467	Whib	0.79
PF07690	MFS_1	0.79
PF08044	DUF1707	0.79
PF02133	Transp_cyt_pur	0.79
PF01594	AI-2E_transport	0.79
PF00313	CSD	0.79
PF16113	ECH_2	0.79
PF13280	WYL	0.79
PF12770	CHAT	0.79
PF00011	HSP20	0.79
PF05977	MFS_3	0.79
PF07228	SpoIIE	0.79
PF13276	HTH_21	0.79
PF08281	Sigma70_r4_2	0.79
PF03551	PadR	0.79
PF02852	Pyr_redox_dim	0.79
PF05532	CsbD	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	2.36
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	1.57
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.79
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.79
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.79
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.79
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.79
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
All Organisms	root	All Organisms	36.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
cellular organisms	root	All Organisms → cellular organisms	36.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.05 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.51 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.57 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.94 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.57 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.79 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.94 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.79 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.79 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.79 %
Glycomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces	0.79 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.78 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.94 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Phytohabitans flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	0.79 %
Nonomuraea rhodomycinica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rhodomycinica	0.79 %
Glycomyces arizonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces arizonensis	0.79 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.79 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100731257	All Organisms → cellular organisms → Bacteria → Terrabacteria group	932	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100733300	Not Available	650	Open in IMG/M
3300002245\|JGIcombinedJ26739_100418560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1218	Open in IMG/M
3300003505\|JGIcombinedJ51221_10426441	Not Available	537	Open in IMG/M
3300004080\|Ga0062385_10924256	Not Available	580	Open in IMG/M
3300004092\|Ga0062389_101841354	Not Available	784	Open in IMG/M
3300004092\|Ga0062389_104958799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces arizonensis	501	Open in IMG/M
3300005435\|Ga0070714_100399615	Not Available	1298	Open in IMG/M
3300005435\|Ga0070714_102024654	Not Available	561	Open in IMG/M
3300005437\|Ga0070710_10179513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1324	Open in IMG/M
3300005444\|Ga0070694_101791093	Not Available	523	Open in IMG/M
3300005466\|Ga0070685_10517190	Not Available	847	Open in IMG/M
3300005537\|Ga0070730_10578633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	718	Open in IMG/M
3300005546\|Ga0070696_100166531	Not Available	1627	Open in IMG/M
3300005546\|Ga0070696_101546840	Not Available	569	Open in IMG/M
3300005602\|Ga0070762_11279657	Not Available	509	Open in IMG/M
3300005615\|Ga0070702_100607922	Not Available	821	Open in IMG/M
3300006028\|Ga0070717_11112118	Not Available	719	Open in IMG/M
3300006173\|Ga0070716_100272516	Not Available	1164	Open in IMG/M
3300006176\|Ga0070765_101441356	Not Available	648	Open in IMG/M
3300006358\|Ga0068871_100069996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans flavus	2883	Open in IMG/M
3300006755\|Ga0079222_12546564	Not Available	514	Open in IMG/M
3300006804\|Ga0079221_11284635	Not Available	574	Open in IMG/M
3300009012\|Ga0066710_102314081	Not Available	781	Open in IMG/M
3300009176\|Ga0105242_11101236	Not Available	808	Open in IMG/M
3300009698\|Ga0116216_10002514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12169	Open in IMG/M
3300010397\|Ga0134124_10520987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1153	Open in IMG/M
3300010401\|Ga0134121_11928521	Not Available	621	Open in IMG/M
3300010862\|Ga0126348_1315373	Not Available	768	Open in IMG/M
3300011120\|Ga0150983_10530782	Not Available	579	Open in IMG/M
3300011269\|Ga0137392_11413070	Not Available	555	Open in IMG/M
3300012200\|Ga0137382_10522169	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300012203\|Ga0137399_10657440	Not Available	882	Open in IMG/M
3300012507\|Ga0157342_1081739	Not Available	509	Open in IMG/M
3300012924\|Ga0137413_11260108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300012951\|Ga0164300_10836684	Not Available	575	Open in IMG/M
3300013105\|Ga0157369_10385906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1453	Open in IMG/M
3300014157\|Ga0134078_10351810	Not Available	648	Open in IMG/M
3300014169\|Ga0181531_10161173	Not Available	1358	Open in IMG/M
3300014201\|Ga0181537_10924334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	591	Open in IMG/M
3300014495\|Ga0182015_10632249	Not Available	678	Open in IMG/M
3300014658\|Ga0181519_11037443	Not Available	510	Open in IMG/M
3300014969\|Ga0157376_11476386	Not Available	712	Open in IMG/M
3300015241\|Ga0137418_11080046	Not Available	573	Open in IMG/M
3300017928\|Ga0187806_1308451	Not Available	559	Open in IMG/M
3300017937\|Ga0187809_10205993	Not Available	699	Open in IMG/M
3300017942\|Ga0187808_10452924	Not Available	591	Open in IMG/M
3300017947\|Ga0187785_10604867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300017974\|Ga0187777_10785116	Not Available	680	Open in IMG/M
3300017974\|Ga0187777_11070024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300018007\|Ga0187805_10561190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	538	Open in IMG/M
3300018058\|Ga0187766_10159187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1406	Open in IMG/M
3300020000\|Ga0193692_1113542	Not Available	557	Open in IMG/M
3300020002\|Ga0193730_1076080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	952	Open in IMG/M
3300020583\|Ga0210401_11340345	Not Available	573	Open in IMG/M
3300021088\|Ga0210404_10117386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1363	Open in IMG/M
3300021171\|Ga0210405_11382157	Not Available	514	Open in IMG/M
3300021180\|Ga0210396_11398353	Not Available	579	Open in IMG/M
3300021180\|Ga0210396_11627317	Not Available	527	Open in IMG/M
3300021374\|Ga0213881_10196330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	891	Open in IMG/M
3300021388\|Ga0213875_10045473	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2060	Open in IMG/M
3300021402\|Ga0210385_10056023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2646	Open in IMG/M
3300021402\|Ga0210385_11121481	Not Available	604	Open in IMG/M
3300021402\|Ga0210385_11577415	Not Available	501	Open in IMG/M
3300021405\|Ga0210387_10821273	All Organisms → cellular organisms → Bacteria → Terrabacteria group	821	Open in IMG/M
3300021405\|Ga0210387_11613262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300021406\|Ga0210386_10411157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166	Open in IMG/M
3300021433\|Ga0210391_10230893	Not Available	1454	Open in IMG/M
3300021478\|Ga0210402_10435786	Not Available	1217	Open in IMG/M
3300021559\|Ga0210409_10318467	Not Available	1400	Open in IMG/M
3300024225\|Ga0224572_1037172	Not Available	921	Open in IMG/M
3300025898\|Ga0207692_10409212	Not Available	847	Open in IMG/M
3300025898\|Ga0207692_10416783	Not Available	840	Open in IMG/M
3300025914\|Ga0207671_10951963	Not Available	678	Open in IMG/M
3300025915\|Ga0207693_10253964	Not Available	1379	Open in IMG/M
3300025916\|Ga0207663_11400813	Not Available	563	Open in IMG/M
3300025922\|Ga0207646_11926460	Not Available	503	Open in IMG/M
3300025928\|Ga0207700_10528043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1046	Open in IMG/M
3300025928\|Ga0207700_11355454	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300025929\|Ga0207664_10337558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rhodomycinica	1332	Open in IMG/M
3300025939\|Ga0207665_10277116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1247	Open in IMG/M
3300025972\|Ga0207668_10608409	Not Available	953	Open in IMG/M
3300025986\|Ga0207658_11693807	Not Available	578	Open in IMG/M
3300026041\|Ga0207639_11064512	Not Available	758	Open in IMG/M
3300026121\|Ga0207683_11723604	Not Available	576	Open in IMG/M
3300026310\|Ga0209239_1196485	Not Available	733	Open in IMG/M
3300026911\|Ga0209620_1018082	Not Available	617	Open in IMG/M
3300027604\|Ga0208324_1167619	Not Available	593	Open in IMG/M
3300027826\|Ga0209060_10429266	Not Available	601	Open in IMG/M
3300027857\|Ga0209166_10201282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1071	Open in IMG/M
3300028712\|Ga0307285_10187635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300028718\|Ga0307307_10080349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300028811\|Ga0307292_10388992	Not Available	592	Open in IMG/M
3300028824\|Ga0307310_10236398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300028828\|Ga0307312_10067070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2171	Open in IMG/M
3300028877\|Ga0302235_10188977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300028906\|Ga0308309_11769356	Not Available	523	Open in IMG/M
3300030580\|Ga0311355_11474286	Not Available	589	Open in IMG/M
3300030730\|Ga0307482_1189297	Not Available	620	Open in IMG/M
3300031231\|Ga0170824_119509720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300031236\|Ga0302324_101124932	Not Available	1054	Open in IMG/M
3300031525\|Ga0302326_12584664	Not Available	634	Open in IMG/M
3300031708\|Ga0310686_102385162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1976	Open in IMG/M
3300031708\|Ga0310686_102855513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5269	Open in IMG/M
3300031708\|Ga0310686_105041695	Not Available	633	Open in IMG/M
3300031708\|Ga0310686_114357017	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1484	Open in IMG/M
3300031708\|Ga0310686_118525148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1569	Open in IMG/M
3300031740\|Ga0307468_100704457	Not Available	845	Open in IMG/M
3300031740\|Ga0307468_101243265	Not Available	674	Open in IMG/M
3300031748\|Ga0318492_10568996	Not Available	604	Open in IMG/M
3300032068\|Ga0318553_10155709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1184	Open in IMG/M
3300032068\|Ga0318553_10536757	Not Available	613	Open in IMG/M
3300032261\|Ga0306920_101180351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1107	Open in IMG/M
3300032770\|Ga0335085_10694767	Not Available	1132	Open in IMG/M
3300032770\|Ga0335085_11685796	Not Available	653	Open in IMG/M
3300032783\|Ga0335079_11271557	Not Available	736	Open in IMG/M
3300032805\|Ga0335078_10335913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2013	Open in IMG/M
3300032805\|Ga0335078_10840296	Not Available	1113	Open in IMG/M
3300032805\|Ga0335078_12195056	Not Available	582	Open in IMG/M
3300032892\|Ga0335081_10608405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1346	Open in IMG/M
3300032893\|Ga0335069_10780241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300032893\|Ga0335069_11454732	Not Available	739	Open in IMG/M
3300032898\|Ga0335072_10024072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8526	Open in IMG/M
3300032954\|Ga0335083_11040710	Not Available	642	Open in IMG/M
3300033134\|Ga0335073_10416222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.55%
Host-Associated	Host-Associated	9.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.68%
Plants	Host-Associated → Plants	9.45%
Aquatic	Environmental → Aquatic	7.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.74%
Freshwater	Environmental → Aquatic → Freshwater	7.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.51%
Peat	Environmental → Terrestrial → Peat	3.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.36%
Roots	Host-Associated → Plants → Roots	1.57%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.09%
Loam	Environmental → Terrestrial → Soil → Loam	21.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.15%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.15%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_5056700	2032320005	Soil	ARAAICPLWSGAAMSEPGYHEALRLLCQDAGADLHRVLAAACEPVPAWDPVVYLTDFAGQVLIPLAAGAAEQEVAGTMAGRAFDHGASQ
INPhiseqgaiiFebDRAFT_1007312572	3300000364	Soil	MSDPGYHDALRILCHDAGGDMHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGSMAGRAF
INPhiseqgaiiFebDRAFT_1007333001	3300000364	Soil	MSDPGYHDALRILCHDAGGDMHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGSMAGRAFPTGQAVASRGDGPV
JGIcombinedJ26739_1004185601	3300002245	Forest Soil	MREPGYPDALRVLREVTGGDLRRVLAAACEPVPAWDPVVYLGDFSGEVLLPLATGVAEEAVAGSMAGRTFTTG
JGIcombinedJ51221_104264411	3300003505	Forest Soil	MREPGYPDALRVLREVTGGDLHQVLAAACAPLPAWDPVVYLGDFSGEVLLPLAAGVAEEAVAGSMAGRTFTTGQPVT
Ga0062385_109242561	3300004080	Bog Forest Soil	MSQAGYPEALRLLRQGAGGDLHHVLAAACEPLPAWDPVIYLADFANLILVPLAEGIAEEEVAATMPGRAFTTGKPVTSERD
Ga0062389_1018413541	3300004092	Bog Forest Soil	MREPGYSAALRVLRGAAGSDLQEVLTAACAPIPAWDPVVYLGDFSGSMLLPLAGGAGKEAVEGSMAGRAFTTG
Ga0062389_1049587991	3300004092	Bog Forest Soil	MHEPGYSKALRVLREAAGGDLHDVLAAACEPVPATDPVVYLADFSGNLLFPLAVRVAEEDVAGSMAGRAFTTGQPVTAERDGAVR
Ga0070714_1003996151	3300005435	Agricultural Soil	MSEPGYHDALRILRDDAGGDLHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGSMAGRAFTTGQPVTS
Ga0070714_1020246542	3300005435	Agricultural Soil	MSEPGYHGALRILCDDASGDLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQAVTSRGDGPVRVW
Ga0070710_101795131	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYRDALRILCQDAGADLHRVLAAACEPVPARDPVVYLADFACEVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTSDRDG
Ga0070694_1017910932	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHSALRILCQDAGADLHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEVAGTMAGRAFTTGRPVTSDQDG
Ga0070685_105171903	3300005466	Switchgrass Rhizosphere	MSEPGYHDALRILCHDAGGGLHRALVAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSM
Ga0070707_1008645552	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LGAPVGWPGGAARAAMCRLGSEAAMSEPGYHDALRLLCQDAGADLHRVLAAACEPMLARDPVVYLADFASQVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTS
Ga0070730_105786331	3300005537	Surface Soil	MGVPGYPEAFRVLRQDAGADLHRVLAAACGPVPAWDPVVYLADFGHEVLFALAAGVAEEQVAGTMAGRAFTTGQPVTSARD
Ga0070696_1001665316	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MHSLGSGAAMSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGSMAGRAFTTGQPVTS
Ga0070696_1015468402	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFASQVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTS
Ga0070762_112796572	3300005602	Soil	MIQPGYSDALRVLRDAAGGDLQHVIVAACEPIPAWDPVVYLSDFSGEELIPLAAGEATEVVAGSMAGRAFS
Ga0070702_1006079222	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MHSLGSGAAMSEPGYHDALRILCHDASGDLHHALAAACESVPAWDPVVYLADFAHQMLFPLAGDEAEQEVAGSMAGRAFTTGQPVTS
Ga0070717_111121181	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRILCEDAGADLHRVLAAACEPVPARDPVVYLADFACEVLVPLVAGAAEQEVAGTMAGRAFTTGQPV
Ga0070716_1002725162	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRILCHDAGGGLHRALVAACESVPAWDPVVYLTDFAHQVLFPLAGDAAEQEVAGSMA
Ga0070765_1014413562	3300006176	Soil	MGVPGFPEALRVLCHDAGGDLHQVLAAACEPVPAWDPVVYLADFAHMVLFPLAAGVTEEQVAGTMAGRAFTAGQPVTSAR
Ga0068871_1000699961	3300006358	Miscanthus Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQ
Ga0079222_125465641	3300006755	Agricultural Soil	MSEPGYDDALRLLCQDAGADLHRVLAVACEPVPARDPVVYLADFACQVLVPLAAGAAEQE
Ga0079221_112846352	3300006804	Agricultural Soil	MSEPGYHDALRHLCQDAGADLHRVLAAACEPVPARDPVVYLADFASQVLVPLAAGAAEQEVAGTM
Ga0066710_1023140813	3300009012	Grasslands Soil	MSEPGYHEALGLLCQDAGADLHRVLATACEPVPARDPVVYLADFACQVLVPLAADTAEQEVAGTMAGR
Ga0105242_111012362	3300009176	Miscanthus Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGSMAGRAFT
Ga0116216_100025141	3300009698	Peatlands Soil	MSEPGYHDALRVLCQDAGADLHRVLAVACEPVPARDPVVYLADFACQMLVPLAAGAAEQE
Ga0134124_105209871	3300010397	Terrestrial Soil	MSEPGYHSALRVLCQDAGADLHRVLAAACEPVPARDPVVYLADFACEMLVPLAAGAAEQDVAGTMAGR
Ga0134121_119285211	3300010401	Terrestrial Soil	MSEPGYHDALRILCHDAGGDLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMA
Ga0126348_13153731	3300010862	Boreal Forest Soil	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPAWDPVVYLADFACQLLFPLDAGAAEQEVAGTMAGRAFTTGQPVTSDRDG
Ga0150983_105307822	3300011120	Forest Soil	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPAVYLADFACQALVPLAVGAAEQEVAGTMAGRAFTT
Ga0137392_114130701	3300011269	Vadose Zone Soil	MREPGYPDALRVLREVTGGDLQQVLAAACEPVPAWDPVVYLADFSGEVLLPLATGAAEEAVAGS
Ga0137382_105221691	3300012200	Vadose Zone Soil	MSEPGYHEALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFASHVLVPLAAGAAEQEVAETTAGRAFTTAQPVTSAP
Ga0137399_106574402	3300012203	Vadose Zone Soil	MSEPGYHDALRLLCQDAGADLHRVLATACEPVPARDPVVYLADFASQVLVPLAAGAAGQEVAGTMAVRAFTTGRPVTS
Ga0157342_10817391	3300012507	Arabidopsis Rhizosphere	MHSLGSGAAMSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLTDFAHQMLFPLAGDEAEQEVAGSM
Ga0137413_112601083	3300012924	Vadose Zone Soil	MREPGYPDALRVLREITGGDLHQVLAAACEPVPAWDLVVYLADFSGEVLLPLATGAAEEAVAGSMAG
Ga0164300_108366841	3300012951	Soil	MSEPGYHDALRILCDDAGGGLHRALVASCESVPALDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQAVTSLGDGPVRVWV
Ga0157369_103859063	3300013105	Corn Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSM
Ga0134078_103518101	3300014157	Grasslands Soil	MSEPGYHEALRLVCQDAGADVHRVLAAACEPVPARDPVVYLADFAYQVLVPLAAGAAEQEVAGTMAGRAFTTGRPVTSDQDGLVRV
Ga0181531_101611731	3300014169	Bog	MREPGYSAALRVLRGATGSDLQDVLTAACAPVPAWDPVVYLGDFSGSMLLPLAGGAGKEAVEGSMAGRAFTTGRPVAAARGDA
Ga0181537_109243341	3300014201	Bog	MGVPAFDEALRVLSQDAGADVHAVLAVACEPVPAWDPVVYLADFSHQVLVPLVVGMAEEGVAGTLAGRAFMT
Ga0182015_106322491	3300014495	Palsa	LRDAAGGDLQHVLDAACEPVPAWDPVVYLADFSGSVLYPLASRVAEEDVAGSMAGR
Ga0181519_110374431	3300014658	Bog	MSQAGYPEALRLLRQGAGGDLLHVLAAACKPLPAWDPVFYLADFANLVLFPLTQGIAEEEVAATMPGRAFTTGKPVTSERD
Ga0157376_114763861	3300014969	Miscanthus Rhizosphere	MSEPGYHDALRILCHDASGDLHHALAAACESVPAWDPVVYLADFAHQMLFPLAGDEAEQEVAGSMAGRAFTTGQP
Ga0137418_110800462	3300015241	Vadose Zone Soil	MSEPGYHDALRLLCQDAGADLHRVLATACEPVPARDPVVYLADFASQVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTSDQDGK
Ga0187806_13084511	3300017928	Freshwater Sediment	MGVPDYPGALWILCQDAGGDLHRALAVACEPVPAWDPVVYLADFSRQVLFPLAAGVAEEEVAGTMAGRAFATGQPVSAERDGS
Ga0187809_102059931	3300017937	Freshwater Sediment	MSEPGYHDALRILCHDTGGDLHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVA
Ga0187808_104529241	3300017942	Freshwater Sediment	MGVPDYPGALWILCQDAGGDLHRALAVACEPVPAWDPVVYLADFSGQVLFPLAAGVAEEDVAGTMAGRAFATGRPV
Ga0187785_106048671	3300017947	Tropical Peatland	MSEPGYHDALRVLRHDAGVDLHRVLTAACEPVPAWNPVVYLADFAHQVLFPLAAGVAGQDVAGT
Ga0187777_107851162	3300017974	Tropical Peatland	MGVPGYPEAFRVLCQDAGADLHRVLAAACGPVPAWDPVVYLADFAHEVLFPLAAGVAEEQVAGT
Ga0187777_110700241	3300017974	Tropical Peatland	MSEPGYHDALRALRQDAGGDLHRVLAAACEPVPAWDPVVYLADFAFRVLFPLTPGQAEQQVEGTMAGRAFTTGQPVTSGRDG
Ga0187805_105611901	3300018007	Freshwater Sediment	MGVPGYPEAFRVLCQDAGVDLHRVLVTACGPVPAWDPVVYLADFAHEVLFPLAADVTEEQVAGTMA
Ga0187766_101591872	3300018058	Tropical Peatland	MGVPGYPEAFRVLCQDAGADLHRVLAAACGPVPAWDPVVYLADFAHEVLFPLAAGVAEEQVAGTMAGRAFTTGQPVTSAR
Ga0193692_11135421	3300020000	Soil	MSEPGYHDALRVLCQDAGADLHRVLTAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEMAGTMA
Ga0193730_10760802	3300020002	Soil	MSEPGYHSALRVLCQDAGADLHRVLAAACEPLPARDPVVYLADFACQVLVPLAAGAAEQEVAGPSCSACSPA
Ga0210401_113403452	3300020583	Soil	MREPGYPDALRVLREVTGGDLQQVLAAACEPVPAWDPVVYLGDFSGEVLLPLATGAAEEAVAGSMAGRTFTTGQPVTSERD
Ga0210404_101173861	3300021088	Soil	MSEPGYHEALRLLCQDAGADVHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEIAG
Ga0210405_113821571	3300021171	Soil	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQMLVPLAVGAAEQEVAGTMAGR
Ga0210396_113983531	3300021180	Soil	MREPGYPDALRVLREVTGGDLHHVLAAACGAVPAWDPVIYLGDFSGEVLLPLAAGVAEEAVAGSM
Ga0210396_116273171	3300021180	Soil	MSEPGYHDALRILCQDAGADLHRVLAAACEPVPARDPVVYLADFACQALVPLAVGAAEQEVAGTMAGRAFTTGLPVTSDQDGLVRVWVP
Ga0213881_101963302	3300021374	Exposed Rock	MSVPGFPDALRMLCRDAGNDIHQVLAAACGPVPAWDPVVYLADFSRTVLFPLAAGIPEEAVAGTLA
Ga0213875_100454731	3300021388	Plant Roots	MSKPGYHEALRVLCQDAGGDLHRVLAAACEPVPATDPVVYLADFAHLVLFPLRSGLEEQEVAGTMAG
Ga0210385_100560231	3300021402	Soil	MREPGYPDALRVLREVTGGDLNRVLAAACEPVPAWDPVVYLGDFSGEVLLPLATGVAEEPVAGSMAGR
Ga0210385_111214811	3300021402	Soil	MREPGYSAALRVLRDAAGGDLQQVITAACEPLPAWDPIVYLGDFSGEELFPLMPGEATEDVAGSMAGRAFSTG
Ga0210385_115774152	3300021402	Soil	MREPGYPDALRVLREVTGGDLHQVLAAACAPLPAWDPVVYLGDFSGEVLLPLAAGVAEEAVAGSMAGRTFTTGQPV
Ga0210387_108212732	3300021405	Soil	MSGVPGYSEALRVLRRGADADLHRILTAAGEPVPAWDPVVYLAGFSAEVLFPLSAGVAEEDVAGTMAGRAFTSGQPVTSERDGAVRVWVP
Ga0210387_116132621	3300021405	Soil	VTEPGYHDALRLLCQDAGADLHLVLAAACEPVPARDPVVYLADFACQMLVPLAVGAAEQEIAGTMA
Ga0210386_104111571	3300021406	Soil	MREPGYPDALRVLREVTGGDLHQVLAAACAPLPAWDPVVYLGDFSGEVLLPLAAGVAEEAVAGSMAGRTFTTGQPVTTERG
Ga0210391_102308933	3300021433	Soil	MIQPGYSDALRVLRDAAGGDLHHVIVAACKPIPAWDPIVYLSDFSGEELISLTPGEATEAVAGSMAGRAFSTGQPVTRERDDG
Ga0210402_104357862	3300021478	Soil	VMSEPGYHHALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQMLVPLAAGTAEQEVAGTMAGRA
Ga0210409_103184671	3300021559	Soil	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPMVYLADFACQALVPLAVGAAEQEVAGTMAGRAFTTGLPVTSDQDGLVRVWVP
Ga0224572_10371721	3300024225	Rhizosphere	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQMLVPLAAGAAEQEVAGTMAGRAFTTGRPVTSDRD
Ga0207692_104092121	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYRDALRILCQDAGADLHRVLAAACEPVPARDPVVYLADFACEVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTSDRDGLVRV
Ga0207692_104167832	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFASQVLVPLAAGAAEQEVA
Ga0207671_109519631	3300025914	Corn Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQAVTSLGDG
Ga0207693_102539641	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHGALRILCDDASGDLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQAVTSRG
Ga0207663_114008131	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFASQVLVPLAAGAAEQDVAGTMAG
Ga0207646_119264601	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRLLCQDAGADLHRVLAAACEPMLARDPVVYLADFASQVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTSDQD
Ga0207700_105280431	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQA
Ga0207700_113554541	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRILCQDAGGDLHRVLAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGS
Ga0207664_103375581	3300025929	Agricultural Soil	MSEPGYHDALRILRDDAGGDLHRALAAACESVPAWDPVVYLADFAHKVLFPLAGDAAEQEVAGSMAGRAFTTGQPVTSR
Ga0207665_102771162	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPGYHDALRILCHDAGGGLHRALVAACESVPAWDPVVYLTDFAHQVLFPLAGDAAEQEVAGSMAGRAFTT
Ga0207668_106084091	3300025972	Switchgrass Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQAVTSRGPRRGGVSRRRRRT
Ga0207658_116938071	3300025986	Switchgrass Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDAAEQEVAGSMAGRAFTTGQAVTSLGDGPVGRLAPAVKRYAEGLLR
Ga0207639_110645121	3300026041	Corn Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDEAEQEVAGS
Ga0207683_117236041	3300026121	Miscanthus Rhizosphere	MSEPGYHDALRILCDDAGGGLHRALAAACESVPAWDPVVYLADFAHQMLFPLAGDPAEQEVAGSMAGRAFTTGQAVTSRGDGPVR
Ga0209239_11964851	3300026310	Grasslands Soil	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEIAGTMAGRAFTTGRPVTSDQDDLV
Ga0209620_10180821	3300026911	Forest Soil	MSEPGYHEALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEVAGTMAGRAFTTGQPVTSDRDGLVR
Ga0208324_11676191	3300027604	Peatlands Soil	MSEPGYHDALRVLCQDAGADLHRVLAVACEPVPARDPVVYLADFACQMLVPLAAGAAEQEVAGTMAGRAFTTGRPVTSDRD
Ga0209060_104292661	3300027826	Surface Soil	MGVPGYPEAFRVLCQDAGADLHRVLATACGPVPAWDPVVYLADFAHAVLFPLAAGIAEEPVAGTMAGRAFTTGQPVTSARDGL
Ga0209166_102012822	3300027857	Surface Soil	MGVPGYPEAFRVLCQDAGADLHRVLATACGPVPAWDPVVYLADFAHAVLFPLAAGIAEESVAGTMAGRAFTTGQPVT
Ga0307285_101876351	3300028712	Soil	MSEPGYHGALRVLCQDAGAGLYRVLAAACEPLPARDPVVYLADFACQVLVPLAAGAAGQE
Ga0307307_100803493	3300028718	Soil	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEVAG
Ga0307292_103889921	3300028811	Soil	MSEPGYRGALRVLCQDAGAGLYRVLAAACEPLPARDPVVYLADFACQVLVPLAAGAAEQEVAG
Ga0307310_102363982	3300028824	Soil	MSEPGYHSALRVLCQDAGADLHRVLAAACEPLPARDPVVYLADFACQVLVPLAAGAAEQEVAGTMAG
Ga0307312_100670704	3300028828	Soil	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAEQEMAGTMAGRAFTTGRP
Ga0302235_101889771	3300028877	Palsa	MREPGYSDALRVLRASAGGDLKDVLNAACAPIPAWDPVIYLGDFSGNVLFPLSGGAGKEDVEGSLAGRTFTTGETMAAPHGDAVR
Ga0308309_117693561	3300028906	Soil	MGVPGYPEAFRVLCQDAGADLHRVLAAACGPVPAWDPVVYLADFGHEVLFALAAGVAEEQVAGTMAGRAFTTGQPVTSARDGSVRVWVP
Ga0311355_114742862	3300030580	Palsa	MREPGYSDALRVLRDAAGGDLQHVLDAACEPVPAWDPVVYLADFSASVLLPLAVRAAEEDVAGSMAGRAFTTGQ
Ga0307482_11892971	3300030730	Hardwood Forest Soil	MGVPGFPEALRILCHDAGGDLHQVLAAACEPVPAWDPVVYLADFAHMVLFPLAAGVAEEQVAGTMAGRAFTTGQPVT
Ga0170824_1195097202	3300031231	Forest Soil	MSEPGYHDALRLLCQDAGADLHRVLAAACEPVPARDPVVYLADFACQVLVPLAAGAAGQEVAGTMAGRAFTTGRPVTSDQDGPVRVWV
Ga0302324_1011249324	3300031236	Palsa	MIQPGYSDALRVLRDAAGGDLNHVIVAACESIPAWDPIVYLSDFSGQELLPLVFGEATEVVTGSMAGRAFS
Ga0302326_125846641	3300031525	Palsa	MIQPGYSDALRVLRDAAGGDLNHVIVAACESIPAWDPIVYLSDFSGQELLPLVFGEATEVVTGSMAGRAF
Ga0310686_1023851621	3300031708	Soil	MHVPGYPDALRILREVAGGDLTQVLAAACASIPAWDPAVYLGDFSGNVLLPLAVGADSEIIAGSMAGRAFRTGQ
Ga0310686_1028555137	3300031708	Soil	MREPGYSDALRVLRDVAGGDLHLVIAAACEPVPAWDPIVYLGDFSGEKLFPLTAGEATEDVAGSMAGRAFSTGQ
Ga0310686_1050416952	3300031708	Soil	MREPGYSDALRVLRDAAGGDLQHVIAAASEPVPAWDPIVYLGDFSGEELLPLSPGQATEAVAGSMAGRAFSTGQPVTSARDGGI
Ga0310686_1143570171	3300031708	Soil	MIQPGYSDALRVLRDAAGGDLQHVIVAACEPIPAWDPIVYLSDFSGEELIPLAPGEATEVVAGSMAGRAFSTGQ
Ga0310686_1185251482	3300031708	Soil	MSEPGYHDALRILCQDAAADLHRVLAAACEPVPARDPVVYLADFACQMLVPLAAGAAEQEVAGTMAGRAFTTGRPV
Ga0307468_1007044572	3300031740	Hardwood Forest Soil	MSEPGYRSALRVLCQDAGADLHRVLAAACEPVPAQDPVVYLVDFACQVLVPLAAGAAEQEVAGTMAGRA
Ga0307468_1012432651	3300031740	Hardwood Forest Soil	MSEPGYHDALRLLCQAAGADLHRVLAAACEPVPARDPVVYLADFASQVLVPLAAGAAEQEVAGTMAGRAFTTGRPVTSG
Ga0318492_105689962	3300031748	Soil	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVMYLADFARQVLVPLAAGAAEQEVA
Ga0318553_101557091	3300032068	Soil	MSEPGYHDALRVLCQDAGADLHRVLAAACEPVPARDPVMYLADFARQVLVPLAAGAAEQEVAGTMAGRAFTTGRPVTSGRDARSGCGSRWWSKPPGPEC
Ga0318553_105367571	3300032068	Soil	MSMPGFPDALRVLSQDAGGDVHRVLAAACGPVPAWGPVVYLADFARTALFPLAPLLPAEEVAGTMAGRAF
Ga0306920_1011803511	3300032261	Soil	MSEPGYRDALRVVCDDAGVDLHRVLTAACEPLPAWDPVVYLADFAFQVLFPLAAGHAQQDVAGTMAGRAFTTG
Ga0335085_106947673	3300032770	Soil	MSEPGYREALRVLCDDAGVDLHRVLMAVCEPLPAWDPVVYLADFAFQVLFPLAADHAQQDVAGTMAG
Ga0335085_116857961	3300032770	Soil	MSEPGYREALRVLCDDAAVDLHRVLTAACEPLPAWDPVVYLADFAFQVLFPLAADHAQQDVAGTMAGRAFTTGQPVTSPRD
Ga0335079_112715571	3300032783	Soil	MSDPGYDDALRVLCDDAGVDLHRVLTAACEPLPAWDPVVYLADFAFQVLFPLAADHAQQDVAGTMAGRAFTTGQPVTSERDG
Ga0335078_103359131	3300032805	Soil	MRMPGYPEALRVLSQDAGGDVHHVLAAACEPLPAWDPVVYLADFAHRVLFPLAAGLAGQEVEGTLAGRAFTTGQ
Ga0335078_108402963	3300032805	Soil	MGVPDYPGALWILCQDAGGDLQRVLAAACEPVPAWDPVVYLADFSRQVLFPLAAGVAAEEVAGTMAG
Ga0335078_121950561	3300032805	Soil	MSEPGYREALRVLCDDAAVDLHRVLTAVCEPLPAWDPVVYLADFAIQVLFPLAADHAQQDVAG
Ga0335081_106084053	3300032892	Soil	MGQPGYPDALGVLRQAAGGDLHRVLAAACAPAPAWDPVIYLADFAHQVLFPLAAGVAEEEVATTMAGRAFAAGQPVS
Ga0335069_107802412	3300032893	Soil	MSEPGYREALRVLCDDAGVDLRRVLTAACEPLPAWDPVVYLADFAFQVLFPLTADHAQQDVAGTMAGRAFTT
Ga0335069_114547321	3300032893	Soil	MSEPGYRKALRVLCDDAGVDLHRVLTAACEPLPAWDPVVYLADFAFQVLFPLAADHAQQDVAGTMAGRAFTTGQPVTSPRDGSVRVW
Ga0335072_1002407213	3300032898	Soil	MREPGYSDALRVLRDAAGGDLQHVITAACRPVPAWDPVIYLGDFSGEELFPLTAADAIEEVAGSMPGRAFSTG
Ga0335083_110407102	3300032954	Soil	MSEPGYHDALRVLRHDADGDVRRVLAAACEPVPAWDPVVYLADFARQVLFPLTAGMAGQDVAGTMA
Ga0335073_104162221	3300033134	Soil	MGMPDYPGALRILCQDAGADLHRVLAAACEPVPARDPVVYLADFSGHVLFPLAAEVAEEEVAGTMAGRAFATGQPVSARRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066075

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences