Metagenome / Metatranscriptome Family F066061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066061
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	45 residues
Representative Sequence	GLKIINAVTDNMQLTGNERHGTTVHFEKTLEWLPGAAGQHLFNADGGS
Number of Associated Samples	110
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.40 %
% of genes near scaffold ends (potentially truncated)	92.91 %
% of genes from short scaffolds (< 2000 bps)	92.13 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.016 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.772 % of family members)
Environment Ontology (ENVO)	Unclassified (18.898 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.819 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.16% β-sheet: 7.89% Coil/Unstructured: 78.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF16859	TetR_C_11	11.02
PF03992	ABM	3.94
PF07690	MFS_1	3.94
PF00881	Nitroreductase	3.15
PF13530	SCP2_2	2.36
PF13302	Acetyltransf_3	2.36
PF02515	CoA_transf_3	2.36
PF01745	IPT	1.57
PF04250	DUF429	1.57
PF04978	DUF664	1.57
PF13581	HATPase_c_2	1.57
PF01614	IclR	1.57
PF00849	PseudoU_synth_2	0.79
PF01841	Transglut_core	0.79
PF13193	AMP-binding_C	0.79
PF00291	PALP	0.79
PF00781	DAGK_cat	0.79
PF00685	Sulfotransfer_1	0.79
PF04909	Amidohydro_2	0.79
PF01212	Beta_elim_lyase	0.79
PF06500	FrsA-like	0.79
PF00248	Aldo_ket_red	0.79
PF00144	Beta-lactamase	0.79
PF07929	PRiA4_ORF3	0.79
PF07992	Pyr_redox_2	0.79
PF08379	Bact_transglu_N	0.79
PF00027	cNMP_binding	0.79
PF00440	TetR_N	0.79
PF00903	Glyoxalase	0.79
PF05598	DUF772	0.79
PF13412	HTH_24	0.79
PF12802	MarR_2	0.79
PF14572	Pribosyl_synth	0.79
PF00501	AMP-binding	0.79
PF00106	adh_short	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.36
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	1.57
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.57
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.57
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.57
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.79
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.79
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.79
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.79
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.79
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.79
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.79
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.79
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.79
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.79
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.79
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.79
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.79
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.79
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.79
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.79
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.79
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.79
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.02 %
Unclassified	root	N/A	25.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.02 %
Unclassified	root	N/A	25.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.02 %
Unclassified	root	N/A	25.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.63 %
Unclassified	root	N/A	25.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.27 %
Unclassified	root	N/A	25.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48.82 %
Unclassified	root	N/A	25.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.98 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.36 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.98 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.57 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Demequinaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.98 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.57 %
Specibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter	0.79 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.79 %
Demequina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.98 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.57 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.79 %
Specibacter cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter → Specibacter cremeus	0.79 %
Demequina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.98 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.57 %
Frankia sp. EUN1f	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	0.79 %
Specibacter cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter → Specibacter cremeus	0.79 %
Demequina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_104796599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300005184\|Ga0066671_10562410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300005327\|Ga0070658_10600327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	954	Open in IMG/M
3300005339\|Ga0070660_100632897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300005435\|Ga0070714_101439265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300005437\|Ga0070710_11172701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300005439\|Ga0070711_100104767	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300005548\|Ga0070665_100475301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1260	Open in IMG/M
3300005549\|Ga0070704_101241591	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005553\|Ga0066695_10165350	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300005555\|Ga0066692_10384192	Not Available	890	Open in IMG/M
3300005591\|Ga0070761_10265680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027	Open in IMG/M
3300005591\|Ga0070761_10637275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	665	Open in IMG/M
3300005614\|Ga0068856_101527019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300005713\|Ga0066905_102246329	Not Available	509	Open in IMG/M
3300005921\|Ga0070766_10337493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300006028\|Ga0070717_10524635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1071	Open in IMG/M
3300006028\|Ga0070717_11392148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300006173\|Ga0070716_100612219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	821	Open in IMG/M
3300006175\|Ga0070712_101895415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300006176\|Ga0070765_100282683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1529	Open in IMG/M
3300006806\|Ga0079220_10993718	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006871\|Ga0075434_102489589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300006954\|Ga0079219_12143199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300009092\|Ga0105250_10330796	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300009162\|Ga0075423_12936954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300010048\|Ga0126373_12837220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300010048\|Ga0126373_12974726	Not Available	528	Open in IMG/M
3300010358\|Ga0126370_10939739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	784	Open in IMG/M
3300010360\|Ga0126372_12882233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300010361\|Ga0126378_10078816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3183	Open in IMG/M
3300010361\|Ga0126378_10441065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300010361\|Ga0126378_11443919	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300010361\|Ga0126378_12940586	Not Available	543	Open in IMG/M
3300010396\|Ga0134126_10639814	Not Available	1214	Open in IMG/M
3300010396\|Ga0134126_11481271	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	748	Open in IMG/M
3300010396\|Ga0134126_12801505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300010876\|Ga0126361_10208326	Not Available	1360	Open in IMG/M
3300010937\|Ga0137776_1749902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300012205\|Ga0137362_11107096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300012208\|Ga0137376_11491025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300012210\|Ga0137378_11697793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300012357\|Ga0137384_10758351	Not Available	786	Open in IMG/M
3300012361\|Ga0137360_10392794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300014166\|Ga0134079_10615993	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300015373\|Ga0132257_102200141	Not Available	714	Open in IMG/M
3300015374\|Ga0132255_104218234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300016319\|Ga0182033_10430478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1121	Open in IMG/M
3300016341\|Ga0182035_11751468	Not Available	562	Open in IMG/M
3300016387\|Ga0182040_10675226	Not Available	842	Open in IMG/M
3300017932\|Ga0187814_10322322	Not Available	594	Open in IMG/M
3300017959\|Ga0187779_10173032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300017970\|Ga0187783_11144203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300018012\|Ga0187810_10238051	Not Available	745	Open in IMG/M
3300020069\|Ga0197907_11214192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	950	Open in IMG/M
3300020070\|Ga0206356_10624928	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300020582\|Ga0210395_10051205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3025	Open in IMG/M
3300020583\|Ga0210401_10016452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7139	Open in IMG/M
3300020583\|Ga0210401_11284145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300020610\|Ga0154015_1468147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	910	Open in IMG/M
3300021180\|Ga0210396_10022136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5884	Open in IMG/M
3300021180\|Ga0210396_10744843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300021180\|Ga0210396_11393088	Not Available	580	Open in IMG/M
3300021180\|Ga0210396_11524511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300021181\|Ga0210388_11619663	Not Available	537	Open in IMG/M
3300021402\|Ga0210385_10329809	Not Available	1136	Open in IMG/M
3300021402\|Ga0210385_10935039	All Organisms → cellular organisms → Bacteria → Terrabacteria group	666	Open in IMG/M
3300021403\|Ga0210397_10956464	Not Available	664	Open in IMG/M
3300021407\|Ga0210383_10591493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Demequinaceae → Demequina	957	Open in IMG/M
3300021407\|Ga0210383_11142994	Not Available	656	Open in IMG/M
3300021420\|Ga0210394_11378718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300021560\|Ga0126371_13174180	Not Available	556	Open in IMG/M
3300022523\|Ga0242663_1070629	Not Available	652	Open in IMG/M
3300022557\|Ga0212123_10279167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1180	Open in IMG/M
3300025386\|Ga0208585_1056977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300025509\|Ga0208848_1036087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1071	Open in IMG/M
3300025574\|Ga0208717_1016629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2031	Open in IMG/M
3300025634\|Ga0208589_1012753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2521	Open in IMG/M
3300025728\|Ga0207655_1170678	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300025898\|Ga0207692_10475840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	789	Open in IMG/M
3300025906\|Ga0207699_10761936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300025915\|Ga0207693_11381136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300025919\|Ga0207657_10213893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546	Open in IMG/M
3300025919\|Ga0207657_11119688	Not Available	601	Open in IMG/M
3300025924\|Ga0207694_10301156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300025928\|Ga0207700_11355587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300025929\|Ga0207664_11422878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300027765\|Ga0209073_10121059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	943	Open in IMG/M
3300027855\|Ga0209693_10572378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300027857\|Ga0209166_10684633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300028381\|Ga0268264_10354130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1398	Open in IMG/M
3300028808\|Ga0302228_10220893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300028877\|Ga0302235_10524532	Not Available	502	Open in IMG/M
3300030399\|Ga0311353_11538416	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300030618\|Ga0311354_11022750	Not Available	760	Open in IMG/M
3300030677\|Ga0302317_10235029	Not Available	833	Open in IMG/M
3300030763\|Ga0265763_1040318	Not Available	561	Open in IMG/M
3300031543\|Ga0318516_10460258	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031546\|Ga0318538_10149591	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300031564\|Ga0318573_10417832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300031572\|Ga0318515_10597726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300031708\|Ga0310686_110972575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3316	Open in IMG/M
3300031713\|Ga0318496_10123161	Not Available	1404	Open in IMG/M
3300031719\|Ga0306917_10471929	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300031740\|Ga0307468_102175919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	536	Open in IMG/M
3300031748\|Ga0318492_10173058	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031751\|Ga0318494_10329397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300031764\|Ga0318535_10546381	Not Available	514	Open in IMG/M
3300031765\|Ga0318554_10242818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300031798\|Ga0318523_10259352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300031799\|Ga0318565_10126719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1233	Open in IMG/M
3300031835\|Ga0318517_10538919	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031846\|Ga0318512_10440235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300031893\|Ga0318536_10511577	Not Available	603	Open in IMG/M
3300031910\|Ga0306923_11818193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300031942\|Ga0310916_10457332	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300031959\|Ga0318530_10208645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300032043\|Ga0318556_10687669	Not Available	532	Open in IMG/M
3300032055\|Ga0318575_10088297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1487	Open in IMG/M
3300032064\|Ga0318510_10423144	Not Available	569	Open in IMG/M
3300032160\|Ga0311301_12600229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300032174\|Ga0307470_10879240	Not Available	702	Open in IMG/M
3300032828\|Ga0335080_11947934	Not Available	570	Open in IMG/M
3300032898\|Ga0335072_10925842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300032898\|Ga0335072_11753136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter → Specibacter cremeus	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.98%
Host-Associated	Host-Associated	11.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.04%
Plants	Host-Associated → Plants	11.02%
Aquatic	Environmental → Aquatic	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.15%
Peat	Environmental → Terrestrial → Peat	3.94%
Freshwater	Environmental → Aquatic → Freshwater	2.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.57%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.42%
Loam	Environmental → Terrestrial → Soil → Loam	14.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.79%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.09%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.15%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025386	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025728	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1047965991	3300004092	Bog Forest Soil	LKIIDAVVDNLQLTGNGRERTTVHFEKKLEWLPGAAGQHLFSAEGGRQARAGGGNQ*
Ga0066671_105624102	3300005184	Soil	DNMQLTGNERHGTTVHFEKTLQWLPGAAGQHLFNADGDS*
Ga0070658_106003271	3300005327	Corn Rhizosphere	RGRGLRIIDAVAENLQLTGNQRYGTTVHFEKTLDWLPEAAGPHLLNGDDGADH*
Ga0070660_1006328972	3300005339	Corn Rhizosphere	AVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS*
Ga0070714_1014392651	3300005435	Agricultural Soil	TAEHGRGLKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPGEHLSHGDRR*
Ga0070710_111727012	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EHGRGLKIINAVVDNLQLTGNRHGVTVHFEKKLDWLPGAAGRHLFQTEGGG*
Ga0070711_1001047673	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNAGSDS*
Ga0070665_1004753015	3300005548	Switchgrass Rhizosphere	RIIDAVAENLQLTGNQRYGTTVHFEKTLDWLPEAAGPHLLNGDDGADH*
Ga0070704_1012415911	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	DNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS*
Ga0066695_101653503	3300005553	Soil	AVVDNLQLTGNEREGTTLRFEKTLEWLPGAAGRYLFSADGGS*
Ga0066692_103841921	3300005555	Soil	DAVTDNLRLTGNGRAGTTVHFEKTLDWVPGAMGEHLTNADG*
Ga0070761_102656803	3300005591	Soil	GLAIINAVTDNMQLTGNERHGTTVHFEKTLQWLPGAAGQQLFNADDGS*
Ga0070761_106372753	3300005591	Soil	IINAVTDNMQLTGNERHGTTVHFEKTLQWLPGAAGEHLFNADGGS*
Ga0068856_1015270191	3300005614	Corn Rhizosphere	KIIHAVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS*
Ga0066905_1022463291	3300005713	Tropical Forest Soil	KIIDALTDNMRLTGNGMTTVHFEKALEWVPGALGEHLSHGEW*
Ga0070766_103374933	3300005921	Soil	GLKIIDALTDNLQLTGDGRAGTTVHFEKVLSWIPGAAGEYLFSAPA*
Ga0070717_105246351	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	INAVMDNLQLTGNGCQGTTVHFEKKLEWIPGAAGQHLFHADGS*
Ga0070717_113921482	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GRGLKIIDAVADNLLLVSDERQGTTVHFEKTLEWLPGAVGQHLFNFSGD*
Ga0070716_1006122191	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ENLQLTGNQRYGTTVHFEKTLDWLPEAAWPHLLNGDDGAGH*
Ga0070712_1018954152	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TSTGRQGTTVHFEKELEWLPGAAGQHLFHMDGVG*
Ga0070765_1002826834	3300006176	Soil	GLKIIDALTDNLQLTGDGRAGTTVHFEKVLSWIPGAAGEHLFSAHA*
Ga0079220_109937181	3300006806	Agricultural Soil	RGLKIIHAVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS*
Ga0075434_1024895891	3300006871	Populus Rhizosphere	TIIDAVTDNVRLTGNGMTTVHFEKALEWVPGAPGEHLSHGDR*
Ga0079219_121431991	3300006954	Agricultural Soil	GRGLKIINAVVDNLQLTGNERNGVTVHFEKKLEWLPGAAGRHLFHANSGS*
Ga0105250_103307962	3300009092	Switchgrass Rhizosphere	LKIIHAVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS*
Ga0075423_129369542	3300009162	Populus Rhizosphere	LRIIHAVADNMQLTGSERYGTTVHFEKTLQWLPGATGQHLFNADGDS*
Ga0126373_128372201	3300010048	Tropical Forest Soil	VADNMQLTGNERHGTTVHFEKTLEWLPGAAGQHLFNGGGDG*
Ga0126373_129747262	3300010048	Tropical Forest Soil	GRGLKIISAVTDNLQLTGNGRQGTTVHFEKKLDWLPGAAGQHLLRADGG*
Ga0126370_109397391	3300010358	Tropical Forest Soil	GLRIIDAVTDNLRLTGNGRAGTTVHFEKELDWVPGAPGEHLISTDR*
Ga0126372_128822332	3300010360	Tropical Forest Soil	GLKIIDAVVDNLQLRSNQYQGTTVHFEKTLEWVPGAAGQYLFNADSDRA*
Ga0126378_100788166	3300010361	Tropical Forest Soil	INAVVDNLQLTGNERQGTTVRFEKALDWLPDAAGLQLFDHGSAG*
Ga0126378_104410652	3300010361	Tropical Forest Soil	VADNMQLTGNERRGTTVHFEKTLEWLPGAAGQHLFNADSDS*
Ga0126378_114439191	3300010361	Tropical Forest Soil	DNLQLTGNGQQGTTVHFEKDLQWVPGAAGKHLSHDDG*
Ga0126378_129405862	3300010361	Tropical Forest Soil	DHGMPEHGRGLKIIDAVTDELSMTGSGLAGTTVRFEKVLTWIPGAPAEQLSATGR*
Ga0134126_106398143	3300010396	Terrestrial Soil	IHAVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNAGSDS*
Ga0134126_114812711	3300010396	Terrestrial Soil	TDNMQLTGSERHGTTVHFEKTLQWLPGAAGQHLFNADGDT*
Ga0134126_128015051	3300010396	Terrestrial Soil	GLKIIDAVADNLQLTGDDRQGTVVHFEKTLEWVPGAPGQYLISTGSTR*
Ga0126361_102083261	3300010876	Boreal Forest Soil	VTDNMQLTGNEHHGTTVHFEKALEWLPGATGQLLFNADGGS*
Ga0137776_17499021	3300010937	Sediment	GLKIIDAVADNLRLTGNHRRGTTVHFEKTLEWLPGAAGEHLFNADGVA*
Ga0137362_111070961	3300012205	Vadose Zone Soil	VTDNLQLWPNERLGATVHFEKTLEWLPGAPGRQLFTADRGVTGRQA*
Ga0137376_114910251	3300012208	Vadose Zone Soil	RGLSIIDAVTDNLRLTGNGRAGTTVHFEKELDWVPGAPGEHLIQRGG*
Ga0137378_116977931	3300012210	Vadose Zone Soil	IIDAVTDNLQLRPNERLGATVHFEKTLEWLPGAPGRRLFTADRGATGRQA*
Ga0137384_107583512	3300012357	Vadose Zone Soil	KIIDAVTDNLRLTGNGRAGTTVHFEKTLDWVPGALGEHLTNADG*
Ga0137360_103927943	3300012361	Vadose Zone Soil	GLKIIDAVVDNLELTGNGRDGTTVHFEKTLSWLPGAAGEHLFSAHA*
Ga0134079_106159931	3300014166	Grasslands Soil	GLKIINAVVDNLQLTGNGRQGTTVHFEKKLDWMPGAAGQYLFNADGDS*
Ga0132257_1022001411	3300015373	Arabidopsis Rhizosphere	LTGNERHGTTVHFEKTLQWLPGAAGQHLFNASGDS*
Ga0132255_1042182342	3300015374	Arabidopsis Rhizosphere	LKIIDALTDKMRMAGNGMTTVHFEKALEWVPGALGEHLSHGDG*
Ga0182033_104304782	3300016319	Soil	GRGLKIIDAVTDNLRLTGNGRAGTTVHFEKALDWVPGALGEHLSRGDG
Ga0182035_117514681	3300016341	Soil	GRGLKIIDAVMDSMRLTTTELRGTAVHFEKELEWLPGAAGEHLINTDSGR
Ga0182040_106752262	3300016387	Soil	AVTDNMRLTGNGMTTVHFEKALEWVPGAAGEHLSHGDQ
Ga0187814_103223222	3300017932	Freshwater Sediment	VTLTGGDGQGTTVHFEKALDWVPGAAGQHLFSADTAG
Ga0187779_101730323	3300017959	Tropical Peatland	DNLQLTGDERRGTTVHFEKALEWLPGAPGQHLFNAGGGG
Ga0187783_111442032	3300017970	Tropical Peatland	LKIMDAVVDNLRLTGGSDGTTVHFEKDLDWVPGATGAQLQAGER
Ga0187810_102380511	3300018012	Freshwater Sediment	QLTSNHRQGTTVHFEKTLEWLPGAAGKHLFNADGGT
Ga0197907_112141922	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	DNLQLTADEGLGATVHFEKTLDWLPGAPGQHLFRAEHGG
Ga0206356_106249281	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	QLTGSERHGTTVHFEKTLEWLPGAAGQHLFNADSDS
Ga0210395_100512055	3300020582	Soil	LKIINAVVDNLQLAGNERQGTTVHFEKTLEWLPGAAGRHLFNGDGGGQAQSADVPGC
Ga0210401_100164521	3300020583	Soil	GMPEHGRGLKIIDAVTDELSLTGSGPAGTTVRFEKVLNWVPGAPAEQLSGAGR
Ga0210401_112841451	3300020583	Soil	LELTGNEGRGTTLHFDKKLEWLPGAPGQHLFKDDGGSPR
Ga0154015_14681471	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	AVVDNLRLSSDQRQGTTVHFEKTLEWLPGAVGQHLFSAAGD
Ga0210396_100221367	3300021180	Soil	DNLQLTSNHRQGTTVHFEKTLEWLPGAAGQHLFNADGAA
Ga0210396_107448431	3300021180	Soil	RGLKIIDAVTDNLRLTGNGGAGTTLHFEKKLDWVPGAPGEHLAHRDR
Ga0210396_113930882	3300021180	Soil	GNLQRMGNQRHGTTVHLEKTLEWLPGAAGQHLFNAGGGS
Ga0210396_115245111	3300021180	Soil	INAVTDNMHLTGNERHGTTVHFEKTLEWLPGAAGQHLFNADGGS
Ga0210388_116196631	3300021181	Soil	VTDNMHLTGNERHGTTVHFEKTLEWLPGAAGQHLFNADGGS
Ga0210385_103298091	3300021402	Soil	LKIIDAVTDELSLSGDGEAGTTVHFEKVLEWEPGALAEQLSVVGH
Ga0210385_109350392	3300021402	Soil	HGRGLKIIDAVTDNLQLTGNQGHGPTLHFEKTLEWLPGAAGRHLFHADGGS
Ga0210397_109564641	3300021403	Soil	LTGNEREGRTVHFEKTLDWLPGAAGQHLSSVDSRGEA
Ga0210383_105914931	3300021407	Soil	KIIDAVADNLQLMGNQRHGTTVHFEKTLEWLPGAAGQHLFNAGGGS
Ga0210383_111429941	3300021407	Soil	HGRGLKIIDAVVDNLELTGDGHDGTTVHFEKNLSWLPGAAGEHLFSARA
Ga0210394_113787181	3300021420	Soil	GLKIINAVTDNMQLTGNERHGTTVHFEKTLEWLPGAAGQHLFNADGGS
Ga0126371_131741801	3300021560	Tropical Forest Soil	LKIIDAVTDNLRLTGNGTTTVHFEKALEWVPGAPGEHLSHGDG
Ga0242663_10706293	3300022523	Soil	EHGRGLKIIDAVTDELSLTGSGPAGTTVHFEKILTWIPGAPAEQLSAAGR
Ga0212123_102791673	3300022557	Iron-Sulfur Acid Spring	HGRGLKIIDAVTDNLRLTGNGRAGTTVHFEKKLDWVPGAPGEHLAHRDR
Ga0224565_10407921	3300024176	Plant Litter	GVALTAEHGRGLKIMDAVVDNLRLTGGRDGTTVHFEKDLDWVPGATGEQLYADGR
Ga0208585_10569772	3300025386	Arctic Peat Soil	VTDNLQLTGDGHDGTTVHFEKALSWLPGAAGEHLFSARA
Ga0208848_10360871	3300025509	Arctic Peat Soil	AEHGRGLTIINALTDNLQLTGDGRARTTVHFEKALSWEPGAAGEHLFSARA
Ga0208717_10166294	3300025574	Arctic Peat Soil	MALFLPRDAASDNLQLTGDGRAGTTVHFEKVLSWIPGAAGEHLFSAHA
Ga0208589_10127535	3300025634	Arctic Peat Soil	LTIINAVVDNLQLTGNEREGTTVHFEKTLDWVPGAAGEHLFSADSASHAQHGQANGVKQ
Ga0207655_11706781	3300025728	Miscanthus Rhizosphere	AVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS
Ga0207692_104758402	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RGLKIMDAVVDNLRLSGDGRETTVHFEKDLDWVPGAAGEHLSGHDG
Ga0207699_107619361	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LKIIRAVADNMQLTGSERHGTTVHFEKTLQWLPGAAGQHLFNADGDS
Ga0207693_113811362	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DNMQLTGSERHGTTVHFEKTLQWLPGAAGQHLFNADGDS
Ga0207657_102138931	3300025919	Corn Rhizosphere	VADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS
Ga0207657_111196882	3300025919	Corn Rhizosphere	MQLTGSERHGTTVHFEKTLQWLPGAAGQHLFNADGGS
Ga0207694_103011561	3300025924	Corn Rhizosphere	IIHAVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNADSDS
Ga0207700_113555872	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GRGLMIIDSVVDNLQLTSTDYRGTTVHFEKELEWLPGAAGQHLAHGNGIG
Ga0207664_114228781	3300025929	Agricultural Soil	VADNMQLTGSERHGTTVHFEKTLQWLPGAAGQHLFNADSDS
Ga0209073_101210593	3300027765	Agricultural Soil	LKIIHAVADNMQLTGSERHGTTVHFEKTLQWLPGAAGQHLFNADGDS
Ga0209693_105723782	3300027855	Soil	GLKIIDAVADNLQLTGNESQGTIVHFEKTLKWLPGAAGEHLINTDRGS
Ga0209166_106846332	3300027857	Surface Soil	IINAVVDNLQLTGNERQGTTVRFEKTLHWLPGAAGLHLFDPNDPGGAS
Ga0268264_103541303	3300028381	Switchgrass Rhizosphere	GLKIIHAVADNMQLTGSERYGTTVHFEKTLQWLPGAAGQHLFNAGSDS
Ga0302228_102208931	3300028808	Palsa	ADNMQLTGNERHGTTVHFEKTLEWLPGAAGQRLFNAAAAR
Ga0302235_105245322	3300028877	Palsa	IDAVADNVQLTGGQQQGTTLHFEKALEWLPGAAGKQLLGADEA
Ga0311353_115384162	3300030399	Palsa	GLRIIDAVADNMQLTGNARHGTTVHFEKTLDWLPGAAGQRLFNAAAGR
Ga0311354_110227502	3300030618	Palsa	ARPIINAVVDNLQLTGDGRDGTTVHFEKTLDWLPGAAGEQLFSADSGHQVHH
Ga0302317_102350293	3300030677	Palsa	DPDTLMSEHGRGLKIIDAVTDELSLTGDGEAGTTVHFEKVLEWEPGALAEQLSVVGH
Ga0265763_10403181	3300030763	Soil	LVDNLQLTGNEREGTTVRFEKTLKWLPGAAGRYLFNVGGGS
Ga0318516_104602581	3300031543	Soil	TDNMRLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0318538_101495911	3300031546	Soil	DNMRLTGNGMTTVHFEKALEWVPGAPAEHLSHGDE
Ga0318573_104178322	3300031564	Soil	LKIIDAVTDNIHLTGNGMTTVHFEKALEWVPGAPGEHLSHGDG
Ga0318515_105977262	3300031572	Soil	LTAEHGRGLKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0310686_1109725755	3300031708	Soil	GLKIIDAVMDTLLLTGNEGHGTTVHFEKALDWVPGAAGEQLFSANAHGNQ
Ga0318496_101231612	3300031713	Soil	VTDNMRLTGNGMTTVHFEKALEWVPGAAGEHLSHGDQ
Ga0306917_104719291	3300031719	Soil	KIIHAVADNIQLTGNECHGTTVHFEKTLEWLPGAAGQYLFNADGDS
Ga0307468_1021759192	3300031740	Hardwood Forest Soil	NAEVDNLQLTGNERNCVTVHFEKKLDWLPGAAGRYLFHASGDS
Ga0318492_101730584	3300031748	Soil	DPVPLTSEHGRGLKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0318494_103293971	3300031751	Soil	HGRGLKIIDAVTDNIHLTGNGMTTVHFEKALEWVPGAPGEHLSHGDG
Ga0318535_105463812	3300031764	Soil	IDAVTDSMRLTGNGMTTVHFEKALEWVPGAAGEHLSHGDQ
Ga0318554_102428182	3300031765	Soil	RGLGIIDAVTDNLRLTVYGRAGTTVHFEKALDWVPGTLGEHLSRGDG
Ga0318523_102593522	3300031798	Soil	AEAGRGLRIIDAVTDNLRLTGNGRAGTTVHFEKELDWVPGAPGEHLINADS
Ga0318565_101267192	3300031799	Soil	PVTAEHGRGLKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAAGEHLSHGDQ
Ga0318517_105389191	3300031835	Soil	RGLKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHLSHGGQ
Ga0318512_104402352	3300031846	Soil	SRRGLKIIDAVTDNLRLTGNGRAGTTVHFEKALDWVPGALGEHLSRGDG
Ga0318536_105115771	3300031893	Soil	LKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHLSHGDE
Ga0306923_118181932	3300031910	Soil	AEGGRGLGIIDAVTDNLRLTVYGRAGTTVHFEKALDWVPGTLGEHLSRGDG
Ga0310916_104573324	3300031942	Soil	EHGRGLKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0318530_102086451	3300031959	Soil	AEGGRGLGIIDAVTDNLRLTVYGRAGTTVHFEKALDWVPGTPGEHLSRGDG
Ga0318556_106876691	3300032043	Soil	IIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0318575_100882974	3300032055	Soil	PVPVTAEHGRGLKIIDAVTDNIHLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0318510_104231441	3300032064	Soil	LKIIDAVTDNMRLTGNGMTTVHFEKALEWVPGAPAEHPSHGDE
Ga0311301_103246074	3300032160	Peatlands Soil	ENGRGLKIMNAVVDDLRLTSSAREGTTVHFEKTLRWEPGAAGEQLSRAEG
Ga0311301_126002292	3300032160	Peatlands Soil	LKIINAVADSMQLTGNERHGTTVHFEKTLQWLPGAAGQHLFNADGGR
Ga0307470_108792401	3300032174	Hardwood Forest Soil	VADNLQLTGSERHGTTVHFEKTRQGLPGAAGQHLFNADGGS
Ga0335080_119479342	3300032828	Soil	LTGNERHGTTVHFEKTLEWLPGAAGQHLFNADGDS
Ga0335072_109258422	3300032898	Soil	DNMQLTGNERHGTTVHFEKTLQWLPGAAGQYLFNADGDS
Ga0335072_117531361	3300032898	Soil	ADNLRLTGNERQGTIVHFEKTLEWLPGAAGQHLFNADSGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences