Metagenome / Metatranscriptome Family F066051

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066051
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	85 residues
Representative Sequence	SAILLRRAAEQLRETALNDLRRFRLLGRETEAKRETFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLDLF
Number of Associated Samples	106
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.30 %
% of genes near scaffold ends (potentially truncated)	85.04 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.260 % of family members)
Environment Ontology (ENVO)	Unclassified (29.134 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.630 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.54% β-sheet: 0.00% Coil/Unstructured: 29.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01343	Peptidase_S49	3.15
PF02776	TPP_enzyme_N	1.57
PF01791	DeoC	1.57
PF00291	PALP	0.79
PF13207	AAA_17	0.79
PF06782	UPF0236	0.79
PF13673	Acetyltransf_10	0.79
PF04909	Amidohydro_2	0.79
PF13884	Peptidase_S74	0.79
PF07691	PA14	0.79
PF00574	CLP_protease	0.79
PF00732	GMC_oxred_N	0.79
PF02621	VitK2_biosynth	0.79
PF03098	An_peroxidase	0.79
PF02868	Peptidase_M4_C	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	7.87
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.79
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.79
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	44.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.57 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	44.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	36.22 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.57 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.22 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	2.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.57 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.22 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.36 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	0.79 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.22 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.36 %
Nitrosococcus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus halophilus	0.79 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.79 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16873221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2013	Open in IMG/M
2166559005\|cont_contig101398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
2170459003\|FZ032L002JSKVX	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
2170459004\|F62QY1Z02JIZ91	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
2170459006\|GBPF9FW02FO119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus → Nitrosococcus halophilus	512	Open in IMG/M
2170459009\|GA8DASG02IMYNC	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
2170459010\|GIO7OMY02I88JA	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300000559\|F14TC_100099094	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300000955\|JGI1027J12803_102331299	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300000955\|JGI1027J12803_103467136	All Organisms → cellular organisms → Bacteria → Proteobacteria	936	Open in IMG/M
3300000955\|JGI1027J12803_105950782	All Organisms → cellular organisms → Bacteria	3159	Open in IMG/M
3300001081\|JGI12662J13196_1002888	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300001991\|JGI24743J22301_10061792	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300004114\|Ga0062593_103340559	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300004463\|Ga0063356_104045984	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300005171\|Ga0066677_10526872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300005172\|Ga0066683_10881328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300005178\|Ga0066688_10211126	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005186\|Ga0066676_10729428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300005332\|Ga0066388_101891863	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300005332\|Ga0066388_102949388	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005339\|Ga0070660_100805211	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005354\|Ga0070675_100259534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1522	Open in IMG/M
3300005434\|Ga0070709_11774973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300005447\|Ga0066689_11001501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	514	Open in IMG/M
3300005536\|Ga0070697_100085823	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M
3300005540\|Ga0066697_10491911	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300005553\|Ga0066695_10662397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300005556\|Ga0066707_10276314	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005556\|Ga0066707_10742686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300005559\|Ga0066700_10824777	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300005937\|Ga0081455_10082186	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300006031\|Ga0066651_10457426	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006173\|Ga0070716_100859864	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006173\|Ga0070716_101639893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300006791\|Ga0066653_10144145	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300006791\|Ga0066653_10718349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300006797\|Ga0066659_10853489	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300009012\|Ga0066710_100387876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2078	Open in IMG/M
3300009012\|Ga0066710_102734780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300009137\|Ga0066709_101169756	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300009137\|Ga0066709_103421251	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010043\|Ga0126380_10532571	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300010046\|Ga0126384_10067949	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300010047\|Ga0126382_10005369	All Organisms → cellular organisms → Bacteria	5768	Open in IMG/M
3300010335\|Ga0134063_10759544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300010359\|Ga0126376_10255031	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300010359\|Ga0126376_10864789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300010360\|Ga0126372_11756572	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010362\|Ga0126377_12487290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300010366\|Ga0126379_10127928	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300010366\|Ga0126379_12613985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	602	Open in IMG/M
3300010398\|Ga0126383_11283284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	822	Open in IMG/M
3300012198\|Ga0137364_11473892	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012199\|Ga0137383_10032633	All Organisms → cellular organisms → Bacteria	3663	Open in IMG/M
3300012200\|Ga0137382_10962706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	614	Open in IMG/M
3300012201\|Ga0137365_10016864	All Organisms → cellular organisms → Bacteria → Proteobacteria	5709	Open in IMG/M
3300012203\|Ga0137399_10677282	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012203\|Ga0137399_10897176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300012203\|Ga0137399_11133500	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012285\|Ga0137370_10056764	All Organisms → cellular organisms → Bacteria → Proteobacteria	2115	Open in IMG/M
3300012354\|Ga0137366_10101206	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300012354\|Ga0137366_10366590	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012356\|Ga0137371_10135336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1930	Open in IMG/M
3300012356\|Ga0137371_11126572	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012361\|Ga0137360_10017916	All Organisms → cellular organisms → Bacteria → Proteobacteria	4668	Open in IMG/M
3300012362\|Ga0137361_11789084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300012582\|Ga0137358_10179768	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300012582\|Ga0137358_10483074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	835	Open in IMG/M
3300012918\|Ga0137396_10108008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1993	Open in IMG/M
3300012918\|Ga0137396_10937176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300012922\|Ga0137394_10271665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1450	Open in IMG/M
3300012927\|Ga0137416_10786020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300012929\|Ga0137404_12241709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300012930\|Ga0137407_10687050	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300012955\|Ga0164298_10816333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	669	Open in IMG/M
3300012958\|Ga0164299_11544114	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012960\|Ga0164301_10148447	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300012961\|Ga0164302_10397195	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012971\|Ga0126369_12951241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012986\|Ga0164304_10778700	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300014154\|Ga0134075_10265928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300014157\|Ga0134078_10166863	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300015241\|Ga0137418_10628317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300015264\|Ga0137403_10420269	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300015356\|Ga0134073_10237430	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300015372\|Ga0132256_100962166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300016270\|Ga0182036_10274972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1271	Open in IMG/M
3300016319\|Ga0182033_10123431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1952	Open in IMG/M
3300016357\|Ga0182032_10565157	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300016357\|Ga0182032_11069490	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300017656\|Ga0134112_10283998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300017656\|Ga0134112_10489998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300018433\|Ga0066667_10216923	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300018433\|Ga0066667_10692037	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300019878\|Ga0193715_1050121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300021344\|Ga0193719_10340220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300021445\|Ga0182009_10837936	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300021478\|Ga0210402_10642837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	982	Open in IMG/M
3300021560\|Ga0126371_12942919	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300022534\|Ga0224452_1015914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	2040	Open in IMG/M
3300026314\|Ga0209268_1109118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300026317\|Ga0209154_1211652	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300026324\|Ga0209470_1323909	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300026524\|Ga0209690_1235110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300026548\|Ga0209161_10282451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300028536\|Ga0137415_10078722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3156	Open in IMG/M
3300028536\|Ga0137415_10655991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300028536\|Ga0137415_11291022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300028718\|Ga0307307_10255286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	560	Open in IMG/M
3300028768\|Ga0307280_10216421	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300028824\|Ga0307310_10483551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	622	Open in IMG/M
3300028828\|Ga0307312_10119224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1652	Open in IMG/M
3300030916\|Ga0075386_12214801	All Organisms → cellular organisms → Bacteria	3281	Open in IMG/M
3300031446\|Ga0170820_13507637	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300031719\|Ga0306917_11183944	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031879\|Ga0306919_10182757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1549	Open in IMG/M
3300031890\|Ga0306925_10184723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2247	Open in IMG/M
3300031910\|Ga0306923_10715301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1113	Open in IMG/M
3300031912\|Ga0306921_10338354	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1760	Open in IMG/M
3300031946\|Ga0310910_10306797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1249	Open in IMG/M
3300032035\|Ga0310911_10697332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300032076\|Ga0306924_11731485	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300032180\|Ga0307471_102908112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300032205\|Ga0307472_102249789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300033289\|Ga0310914_11447480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300034820\|Ga0373959_0181764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.70%
Host-Associated	Host-Associated	5.51%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.91%
Plants	Host-Associated → Plants	5.51%
Aquatic	Environmental → Aquatic	0.79%
Modeled	Engineered → Modeled	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.36%
Sediment	Environmental → Aquatic → Sediment	0.79%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.83%
Loam	Environmental → Terrestrial → Soil → Loam	7.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001081	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02032040	2088090014	Soil	LVLIYTLNATWALGGAILLRRAAEQLREAALSNLQLLRVVSYPIEEKRKIFDELIAEIRALKKGAFAPLTEQHFIRAILVPSGGLGLLAVGQRLLDIF
cont_0397.00006370	2166559005	Simulated	SAILLRRAAEQLRETALNDLRRFRLLGRETEAKRETFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLDLF
E4A_02397510	2170459003	Grass Soil	AITAAWALGSAILLRRAAEQLRETALNDLRRFRLLGRETEAKREMFDELIAEIRDLKTGAFAPLTEQSFIRAVLFPGAGLGLLAVGQRLLDLF
E4B_07407770	2170459004	Grass Soil	EQLRETALNDLRRFRLLGRETEAKRETFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLDLF
L01_05929650	2170459006	Grass Soil	WALGSAILLRRAAEHLRETALNDLRRFRLLGRETEAKRETFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLDLF
F47_06707880	2170459009	Grass Soil	LGSAILLRRAAEQLRETALNDLRRFRLLGREVAAKRETFDELIAEIRDLKTGAFAPLTDQPFMRAVLFPGAGLGLLAVGQRLLDVF
F62_03166700	2170459010	Grass Soil	WPASLALIYAIDAAWVLGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQVFDELMAEIRDLKLGAFAPLTEQP
F14TC_1000990942	3300000559	Soil	WALGSAILLRRAAEQLRETALNDLRRFRLLGREVEAKRQMFDELITEIRDLKTGAFAPLSDQPFIRAVLFPGAAVGLLAVGQRVFDIF*
JGI1027J12803_1023312992	3300000955	Soil	LIWAVTAAWALGSAILLRRAAEQLRETALNDLRRFRLLGREVAAKRETFDELIAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIAVGQRVFGIF*
JGI1027J12803_1034671362	3300000955	Soil	MLLRRAAEQLRDAALNNLQLSRIRERASEAKREMFDELIAEIRGLKKGAFAPLTEQPFVRAIIVPSGGLGLLAVAQRII*
JGI1027J12803_1059507822	3300000955	Soil	ALNDLRRFRLLGQESEAKRKTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDLF*
JGI12662J13196_10028881	3300001081	Forest Soil	TAAWALGSAILLKRAAEQLRQTALNDLRRFRLLGQESEAKRHTFDELIAEIRDLKTGAFAPLTEQPFVRAIIVPSGGLGLLAVGQRLLDLF*
JGI24743J22301_100617921	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	TVIFAITAAWAVGSAILLRRAAEQLRWRALSDLRRFRLLGQRSDIKRQTFDELIAEIGNIKTGAFAPLTEQPFVQAILYPGCGLGILAVAQRLLDI*
Ga0062593_1033405592	3300004114	Soil	ILLRRAAEQLRDTALNDLRRFRLLGREVEAKRQMFDELITEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLLAVAQRLLGIF*
Ga0063356_1040459842	3300004463	Arabidopsis Thaliana Rhizosphere	SAILLRRATEQLRETALNDLRRFRLLGHEVDAKRQTFDELIAEIRDLKTGAFAPLTEQPFIRAILLPGGGLGLLAVGQRLLDIF*
Ga0066677_105268722	3300005171	Soil	SLILISGLNAVWALGSAMLLRRAAEQLREAAINNLQLFLVMSHSVQEKREMFDELIAEIRGLKKGAFAPLTQQPFIHAIIFPSGSVGLLAVGQRLLGIS*
Ga0066683_108813282	3300005172	Soil	LLRRAAEQLRETALNDLRRFRLLGQESEANRETFDELITEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDIF*
Ga0066688_102111261	3300005178	Soil	EQLRETALNDLRRFRLLGQEIEARRQTFDELLAEIRDLKTGAFAPLTDQPFIRAALFPGAALGLLAVGQRLLDLF*
Ga0066676_107294281	3300005186	Soil	QLRDATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLTDQPFVRAVLFPGAGLGLLAVGQRLLDIF*
Ga0066388_1018918631	3300005332	Tropical Forest Soil	ALNDLRRFRLLGQESEAKRQTFDELIAEIRNLKMGAFAPLSDQPFIRAVLFPGAALGLLAVGQRLLNIF*
Ga0066388_1029493881	3300005332	Tropical Forest Soil	ALNDLRRFRLLGWESDVKRLAFDELMAKIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIARRPACVRHLLRHLT*
Ga0070660_1008052111	3300005339	Corn Rhizosphere	VIFAITAAWAVGSAILLRRAAEQLRWRALSDLRRFRLLGQHSDIKRQTFDELIAEIDNIKTGAFAPLTEQPFVQAILYPGCGLGILAVAQRLLDI*
Ga0070675_1002595341	3300005354	Miscanthus Rhizosphere	IVIFAITAAWAVGSAILLRRAAEQLRWRALSDLRRFRLLGQHSDIKRQTFDELIAEIGNIKTGAFAPLTEQPFVQAILYPGCGLGILAVAQRLLDI*
Ga0070709_117749731	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	INACWALGSAILLRRAAEQLRGATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLSDQPFIRAVLFPGAAVGLLAVGQRLLELF*
Ga0066689_110015011	3300005447	Soil	GSAILLRRAAEQLRETALNDLRRFRLMGHEVDAKRQTFDELIAEIRDLKTGAFAPLTDQPFIRAVLFPGGVLGLLAVGQRLLDIF*
Ga0070697_1000858232	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LGSAILLRRAAEQLRETALNDLRRFRLLGRASEEKRETFDELIAEIRDLKMGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLEIF*
Ga0066697_104919111	3300005540	Soil	LLRRAAEQLRDATLSNLQISRVRGRAIEDKRATFDELIAEIRDLKKGAFAPLTEQPFVRAILVPSGALGLLALGQHLLDLF*
Ga0066695_106623972	3300005553	Soil	ITAAWALGSAILLRHAAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKTGAFAPLTEQPFIRAVLFPGAAFGLLAVGQRLFDLF*
Ga0066707_102763141	3300005556	Soil	WALGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQTFDELIAEIRNLKTGAFAPLTDQPFIRAALFPGAALGLLAVGQRLLDLF*
Ga0066707_107426861	3300005556	Soil	EQLRDVALNDLRRFRLLGREVEAKRQMFDELIAEIRDLKTGAFAPLTDQPFIRAVLFPGAAVGLLAVGQRLFDIF*
Ga0066700_108247771	3300005559	Soil	GSAILLRRAAEQLRETALNDLRRFRLAAQIKRFQPKSAEVAADEDTEATLHTFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAALGLLAVGQRLLDLF*
Ga0081455_100821862	3300005937	Tabebuia Heterophylla Rhizosphere	MPRRAAEHLRETALNDLRRFRLLGQESDVKRRAFDELIDEIRGLKTGAFAPLSDQPFVRAVLFPGAGLGLLAVAQRLLGIF*
Ga0066651_104574262	3300006031	Soil	WAVGSAILLRRAAEQLRETALNDLRRLRLEFQKIQTKRQTFDELIAEIRDLKTGAFAPLTEQPFVQAILFPGGGLGLLAVGQRLFDIF*
Ga0070716_1008598642	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LAIYVINACWALGSAILLRRAAEQLRGATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLSEQPFIRAVLFPGAGLGLLAVGQRLLDLF*
Ga0070716_1016398931	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ETALNDLRRFRLLGRETEAKREIFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGILAVGQRLLDIF*
Ga0066653_101441451	3300006791	Soil	WLRRAAEQLRTEAISKLQTLRVASYKDRDRRDMFDDLIGEIRSLKKGAFAPLSEQPFIRAIILPSGGLGLLAVAERVLDVF*
Ga0066653_107183492	3300006791	Soil	GSAMLLRRAAEQLREAAINNLQLFRVMSHSVQEKREMFDELIAEIRGLKNGAFAPLTQQPFIHAIIFPSGGVGLLAVGQRLLGIS*
Ga0066659_108534892	3300006797	Soil	WSPGLLAIYGINVCWALGSAILLRRAAEQLRGATLSNLQLSRVRGRAFEAKRATFDELIAEIRGLKKGAFAPLTDQPFVRAVLFPGAGLGLLAVGQRLLDSF*
Ga0066710_1003878761	3300009012	Grasslands Soil	VLIYAIVAAWVLGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQVFDELMAEIRDLKMGAFAPLTEQSFIRAALFPGAALGLIAVGQRLLDLF
Ga0066710_1027347802	3300009012	Grasslands Soil	WALGSAMLLRRAAEQLREAAINNLQLFRVMSHSVQEKREMFDELIAEIRGLKKGAFAPLTQQPFIHAIIFPSGSVGLLAVGQRLLGIS
Ga0066709_1011697562	3300009137	Grasslands Soil	WALGSAILLRRAAEQLRETALNDLRRFRLLGQEIEAKRQTFDELMAEIRGLKTGAFAPLTDQPFIRAALFPGAALGLLAVGQRLLDLF*
Ga0066709_1034212511	3300009137	Grasslands Soil	TGAWALGSAILLSRAAEQLRDVALNDLRRFRLLGREVEAKRQMFDELIAEIRDLKTGAFAPLTDQPFIRAVLFPGAAVGLLAVGQRLFDIF*
Ga0126380_105325712	3300010043	Tropical Forest Soil	AAWALGSAMLLRRAAEHLRETALNDLRRFRLLGQESEVKRHTFDELIAEVRNLKTGAFAPLSDQPFVRAVLLPGAGLGVLAVAQRLLGIF*
Ga0126384_100679492	3300010046	Tropical Forest Soil	LLRRAAEQLRETALNDLRGFRLLGREVAAKRETFDELIAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLLAVGQRVFEIF*
Ga0126382_100053691	3300010047	Tropical Forest Soil	WALGSAILLRRAAEQLRQTALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKLGAFAPLTEQPFIRAVLFPGAALGLLAVGQRLLDIF*
Ga0134063_107595441	3300010335	Grasslands Soil	EQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKTGAFAPLTEQPFIRAVLFPGAAFGLLAVGQRLFDLF*
Ga0126376_102550311	3300010359	Tropical Forest Soil	LRETALNDLRRFRLLGWESDVKRLAFDELMAKIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIARRPACVR
Ga0126376_108647891	3300010359	Tropical Forest Soil	QLRQTALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKLGAFAPLTEQPFIRAVLFPGAALGLLAVGQRLLDIF*
Ga0126372_117565721	3300010360	Tropical Forest Soil	AAEQLRLAAIRNLQLSRVMSHAVAEKREMFDELIAEIRALKKGAFAPLTQQPFIHAILFNSGGLGLLAVGQRLLEIY*
Ga0126377_124872902	3300010362	Tropical Forest Soil	AILLRRAAEQLRETALNDLRRFRLLGHESEAKRQTFDELIAEIRDLKTGAFAPLSDQPFIRAVLFPGAGLGLLAVGQRLLDMF*
Ga0126379_101279281	3300010366	Tropical Forest Soil	LRRAAEHLRETALNDLRRFRLLGQESEVKRDTFDELIAEVRDLKTGAFAPLSDQPFVRAVLLPGAGLGVLAVAQRLLGIF*
Ga0126379_126139851	3300010366	Tropical Forest Soil	LRHAAEQLRDTALNDLRLFRLLGREVAAKRETFDELMAEIRNLKTGAFAPLSDQPFIRAVLFPGAALGLLAVGQRVFGIF*
Ga0126383_112832841	3300010398	Tropical Forest Soil	LEAAILLRRAAEQLRETALNDLRRFRLLGRDVEAKRQIFDELIAEIHDLKTGAFAPLSDQPFIRAVLFPGAALGLIAVGQRVFDIF*
Ga0137364_114738922	3300012198	Vadose Zone Soil	LLRRAAEHFCETALDDLRRFRLLGQESDAKRRTFDELMAEIHDLKAGAFAPLSDQPFVRAVLFRGTGLGLLTVAQRLLGIF*
Ga0137383_100326331	3300012199	Vadose Zone Soil	AWALGSAILLRRAAEQLRETALSDLRRFRLIGHEVDAKRQTFDELIAEIRDLKTGAFAPLTDQPFIRAVLFPGAALGLLAVGQRLFGFS*
Ga0137382_109627061	3300012200	Vadose Zone Soil	AVWALGSAMLLRRAAEQLREAAINNLQLFRVMSHSVQEKREMFDELIAEIRGLKKGAFAPLTQQPFIHAIIFPSGSVGLLAVGQRLLGIS*
Ga0137365_100168641	3300012201	Vadose Zone Soil	VITAAWVLGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGERLLDLF*
Ga0137399_106772821	3300012203	Vadose Zone Soil	WALGSAILLRRAAEQLRETALNDLRRFRLLGREVVAKRETFDELIAEIRDLKTGAFAPLTDQPFMRAVLFPGAAVGLLAVGQRLFDIF*
Ga0137399_108971762	3300012203	Vadose Zone Soil	IAAWVLGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRRVFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDLF*
Ga0137399_111335001	3300012203	Vadose Zone Soil	ALNDLRRFRLLGREVAAKRETFDELIAEIRDLKTGAFAPLTDQPFMRAVLFPGAGLGLLAVGQRLLDVF*
Ga0137370_100567642	3300012285	Vadose Zone Soil	VLGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDLF*
Ga0137366_101012061	3300012354	Vadose Zone Soil	RAAEQLRETALNDLRRFRLLGQESEAKRETFDELITEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLFDLF*
Ga0137366_103665902	3300012354	Vadose Zone Soil	MLLRRAAEHLRETALNDLRRFRLLGQEGDVKRQAFDELMAEIRDLKTGAFAPLSGQPFVRAVLFPGAGLGLLAVAQRLLGIFEASS*
Ga0137371_101353362	3300012356	Vadose Zone Soil	MLLRRAAEHLRETALNDLRRFCLLGQEGDVKRQAFDELMAEIRDLKTGAFAPLSGQPFVRAVLFPGAGLGLLAVAQRLLGIFEASDR*
Ga0137371_111265722	3300012356	Vadose Zone Soil	LLISAITAAWARGSAILLRRAAEQLRETALNDLRRFRLLGREVAAKRETFDELIAEIRDLKTGAFAPLTDQPFMRAVLFPGAGLGLLAVGQRLLDIF*
Ga0137360_100179161	3300012361	Vadose Zone Soil	AVWALGSAMLLRRAAEQLREAAINNLQLFRVMSHSVQEKREMFDELIAEIRALKKGAFAPLTQQPFIHAIIFPSGGVGLLAVGQRLLGIS*
Ga0137361_117890842	3300012362	Vadose Zone Soil	LRETAVNDLRLFRLLGREVEAKREMFDELIAEIREIKTGAFAPLTDQPFIHAVLFPGAALGLLAVGQRLFDMF*
Ga0137358_101797684	3300012582	Vadose Zone Soil	FAITGAWALGSAILLRRAAEQLRETALNDLRRFRLLGRDVEAKRQMFDQLIAEIRDLKTGAFAPLTDQPFIRAVLFPGAAVGLLAVGQRLFDIF*
Ga0137358_104830742	3300012582	Vadose Zone Soil	GSAILLRRAAEQLRETALNDLRRFRLLGRASEEKRETFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLEIF*
Ga0137396_101080082	3300012918	Vadose Zone Soil	QLRETALNDLRRFRLLGREVEANRQMFDELIAEIREIKTGAFAPLSDQPFIHAVLFPGAALGLLAVGQRLFDMF*
Ga0137396_109371762	3300012918	Vadose Zone Soil	LRETALNDLRRFRLLGRETEAKREMFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLDLF*
Ga0137394_102716652	3300012922	Vadose Zone Soil	LGSAILLRHAAEQLRETAVNDLRLFRLLGREVEAKREMFDELIAEIREIKTGAFAPLSDQPFIHAVLFPGAALGLLAVGQRLFDMF*
Ga0137416_107860201	3300012927	Vadose Zone Soil	SAILLRRAAEQLRETALNDVRRFRLLGQESEAKRQTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDLF*
Ga0137404_122417092	3300012929	Vadose Zone Soil	AILLRRAAEQLRGATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLTDQPFIRAVLFPGAAVGLLAVGQRLFDIF*
Ga0137407_106870502	3300012930	Vadose Zone Soil	ETALNDLRRFRLLGQESEAKRETFDELITEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDIF*
Ga0164298_108163331	3300012955	Soil	AAEQLRETALNDLRRFRLLGREEEAKRQIFDELIAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLLAVGQRVFNIF*
Ga0164299_115441141	3300012958	Soil	VLIIGITAAWALASAMLVRRAAEHLRETALNDLRRFRLLGQESDVKRQAFDELMAEIRDLKTGAFAPLSDQPF
Ga0164301_101484472	3300012960	Soil	VLIIGITAAWALASAMLVRRAAEHLRETALNDLRRFRLLGQESDVKRQAFDELMAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIAVGQRVFDIF*
Ga0164302_103971951	3300012961	Soil	VLIIGITAAWALASAMLVRRAAEHLRETALNDLRRFRLLGQESDVKRQAFDELMAEIRDLKTGAFAPLSDQPFIRAVLFPGAA
Ga0126369_129512411	3300012971	Tropical Forest Soil	RAAEQLREAAISNLQLSRVMSHAVEEKREMFDELIAEIRALKKGAFAPLTQQPFIHAILFNSGGLGLLAVGQRLLEIF*
Ga0164304_107787002	3300012986	Soil	VLIIGITAAWALASAMLVRRAAEHLRETALNDLRRFRLLGRESDVKRQAFDELMAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIAVGQRVFDIF*
Ga0134075_102659282	3300014154	Grasslands Soil	GSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKTGAFAPLTEQPFIRAALFPGAALGLLAVSQRLLDLF*
Ga0134078_101668631	3300014157	Grasslands Soil	LGSAILLRRAAEQLRDVALNDLRRFRLLGREVEAKRQMFDELIAEIRDLKTGAFAPLTDQPFIRAVLFPGAAVGLLAVGQRLFDIF*
Ga0137418_106283171	3300015241	Vadose Zone Soil	WEFFLPHDLRRFRLLGQESDAKRRTFYKLMAEIRDLKAGAFAPLSDQPFVRAVLFPAAGLGLLAVAQRWLGIF*
Ga0137403_104202691	3300015264	Vadose Zone Soil	LLRRAAEQLRETALNDLRRFRLLGRASEEKRETFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLEIF*
Ga0134073_102374301	3300015356	Grasslands Soil	NVCWALGSAILLRRAAEQLRGATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLSEQPFIRAVLFPGAGLGLLAVGQRLLDLF*
Ga0132256_1009621661	3300015372	Arabidopsis Rhizosphere	LRETALNDLRRFRLLGRESDVKRQAFDELMAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIAMGQRVFDIF*
Ga0182036_102749722	3300016270	Soil	LDLASCSSFHLCYHRRMGTGKRHFAKTGAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRNLKTAAFAPMTDQPFIRAILFPGAALGLIAVGQRLLDFS
Ga0182033_101234313	3300016319	Soil	SCFHLCYHRRMGTGKRHFAKTGAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRNLKTAAFAPMTDQPFIRAILFPGAALGLIAVGQRLLDFS
Ga0182032_105651573	3300016357	Soil	MGTGKRHFAKTGAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRNLKTGAFAPLTDQPFIRAVLFPGAALGLLAVGQRLLDLS
Ga0182032_110694902	3300016357	Soil	IYAITAAWALGSAILLRRAAEQLRETALNDLRRFRLLGREVEAKRQMFDELITEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLIAVGQRVFDIF
Ga0134112_102839981	3300017656	Grasslands Soil	QLRDATLDNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLTDQPFVRAVLFPGAGLGLLAVGQRLLDIF
Ga0134112_104899981	3300017656	Grasslands Soil	SAILLRRAAEQLRETALNDLRRFRLLGQESEVKRQTFDELMAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLLAVSQRLFDIF
Ga0066667_102169231	3300018433	Grasslands Soil	SLLAIYGINACWALGSAILLRRAAEQLRGATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLTDQPFVRAVLFPGAGLGLLAVGQRLLDIF
Ga0066667_106920372	3300018433	Grasslands Soil	LLRRAAEQLRETALNDLRRFRLLGQESEAKRETFDELITEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDIF
Ga0193715_10501212	3300019878	Soil	AWVLGSAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQVFDELMTEIRDLKMGAFAPLTEQAFIRAALFPGAALGLLAVGQRLLDLF
Ga0193719_103402201	3300021344	Soil	LLRRAAEQLRETALNDLRRFRLLGRESEAKRETFDELITEIRDLKTGAFAPLTEQPFIRAVLFPGASLGLLAVGQRLFDIF
Ga0182009_108379362	3300021445	Soil	FGAAAFLRRAAEQLRTEAISKLQRLRVASYSDPARRQMFQEMIDEIRALKKGAFAPLSEQPFIRAIILPSGGLGLLAVGQRLLEIF
Ga0210402_106428372	3300021478	Soil	LRRAAEQLRETALNDLRRFRLLGRETEAKREMFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGILAVGQRLLDIF
Ga0126371_129429191	3300021560	Tropical Forest Soil	VLIVGITAAWALGSAMLLRRAAEDLRETALNDLRRFRLLGQESDTKRRTFDELMAEILDLKTGAFAPLSDQPFVRAVLFPGAGLGLLAVAQRLLGIF
Ga0224452_10159141	3300022534	Groundwater Sediment	ILLRRAAEQLRETALNDLRRFRLMGHEVDAKRQTFDELIAEIRDLKTGAFAPLTEQPFIRAVLLPGGGLGLLAVGQRLLDIF
Ga0209268_11091181	3300026314	Soil	QLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRDLKTGAFAPLTEQPFIRAVLFPGAAFGLLAVGQRLFDLF
Ga0209154_12116522	3300026317	Soil	IYSITGAWALGSAILLRRAAEQLRETALNDLRRFRLLGQEIEARRQTFDELLAEIRDLKTGAFAPLTDQPFIRAALFPGAALGLLAVGQRLLDLF
Ga0209470_13239092	3300026324	Soil	AWVLGSAILLRRAAEQLRETALSDLRRFRLLGQESEAKRQTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGERLLDLF
Ga0209690_12351102	3300026524	Soil	SWSPGLLAIYGINVCWALGSAILLRRAAEQLRGATLSNLQLSRVRGRAFEAKRATFDELIAEIRGLKKGAFAPLTDQPFVRAVLFPGAGLGLLAVGQRLLDSF
Ga0209161_102824511	3300026548	Soil	SAILLRRAAEQLRETALNDLRRFRLLGQESEAKRQTFDELIAEIRNLKTGAFAPLTDQPFIRAALFPGAALGLLAVGQRLLDLF
Ga0137415_100787221	3300028536	Vadose Zone Soil	LTIYGINTCWAVGSAILLRRAAEQLREATLNNLQLSRVRGRAIEDKRTTFDELITEIRNLKTGAFAPLTEQPFIRAVLFPGGALGLLAVGQRLLDIF
Ga0137415_106559911	3300028536	Vadose Zone Soil	LLRRAAEQLRETALNDVRRFRLLGQESEAKRQTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDLF
Ga0137415_112910221	3300028536	Vadose Zone Soil	AAEQLRGATLSNLQLSRVRGRAIEAKRATFDELIAEIRGLKKGAFAPLTDQPFVRAVLFPGAGFGLLAVGQRLLDIF
Ga0307307_102552861	3300028718	Soil	RRAAEQLRETALNDLRRFRLTSQESEAKRQTFDELMAEIRNLKMGAFAPLTDQPFIRAVLFPGAALGLLAVGQRLFDIF
Ga0307280_102164211	3300028768	Soil	ILLRRAAEQLRETALNDLRRFRLLGREVAAKRETFDELIAEIRDLKAGAFAPLTDQPFIRAVLFPGAGLGLLAVGQRLFDIF
Ga0307310_104835511	3300028824	Soil	RAAEQLRETALNDLRRFRLTSQESEAKRQTFDELMAEIRNLKMGAFAPLTDQPFIRAVLFPGAALGLLAVGQRLFDIF
Ga0307312_101192241	3300028828	Soil	RRAAEQLRGATLSNLQLSRVRGRAIEAKRATFDELITEIRGLKKGAFAPLTDQPFIRAVLFPGAAVGLLAVGQRLFDIF
Ga0075386_122148014	3300030916	Soil	WALGSAILLRRAAEQLRETALNDLRRFRLLGRETEAKREMFDELIAEIRDLKTGAFAPLTEQPFIRAVLFPGAGLGLLAVGQRLLDLF
Ga0170820_135076371	3300031446	Forest Soil	NATWALGSAILLRRAAEQLRLAALRNLQLSRVMSHAVAEKREMFDELIAEIRALKKGAFAPLTQQPFIHAILFNSGGLGLLAVGQRLLDIF
Ga0306917_111839442	3300031719	Soil	MLLRCAAEQLRETALNDFRRFRLLGRDVEAKRQIFDELIAEIRDLKMGAFAPLSDQPFIRAVLFPGAALGLIAVGQRVFDIF
Ga0306919_101827572	3300031879	Soil	EQLRETALNDFRRFRLFGPDVEAKRQIFDEVIAEIRDLKMGAFAPLSDEPFIRAVLFPGAALGLIAVGQRVFDIF
Ga0306925_101847231	3300031890	Soil	EQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRNLKTAAFAPMTDQPFIRAILFPGAALGLIAVGQRLLDFS
Ga0306923_107153012	3300031910	Soil	MGTGKRHFAKTGAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRNLKTAAFAPMTDQPFIRAILFPGAALGLIAVGQRLLDFS
Ga0306921_103383541	3300031912	Soil	ALNDLRRFRLLGQESDVKRRTFDELMAEIRDLKTGAFAPLSDQPFVRAVLFPGAGLGLLAVAQRLLGIF
Ga0310910_103067971	3300031946	Soil	SSFHLCYHRRMGTGKRHFAKTGAEQLRETALNDLRRFRLLGQESEAKRQTFDELMAEIRNLKTAAFAPMTDQPFIRAILFPGAALGLIAVGQRLLDFS
Ga0310911_106973321	3300032035	Soil	IFALNAAWPIGSAMLLRRAAEQLRETTLSNLQLSRIKDRASEAKRETLDELITEIRRLKKGAFAPLTEQPFIHAILVPSGGLGLLALGQRLWDIF
Ga0306924_117314851	3300032076	Soil	ILIFAITGAWALGSAILLRRAAEQLRDIALNDLRRFRLLGREVEAKRQMFDDLIAEIRDLKTGAFAPLTDQPFIHAVLFPGAALGLLAVGQRLFDIF
Ga0307471_1029081122	3300032180	Hardwood Forest Soil	LGSAILLRRAAEQLRETALNDLRQFRLLGQESEAKRKTFDELMAEIRDLKMGAFAPLTEQPFIRAALFPGAALGLLAVGQRLLDLF
Ga0307472_1022497892	3300032205	Hardwood Forest Soil	AILLRRAAEQLRETALNDLRRFRLLGREVEAKRQIFDELIAEIRDLKTGAFAPLSDQPFIRAVLFPGAALGLLAVGQRVFDIF
Ga0310914_114474801	3300033289	Soil	LNAAWPIGSAMLLRRAAEQLRETTLSNLQLSRIKDRASEAKRETLDELITEIRRLKKGAFAPLTEQPFIHAILVPSGGLGLLALGQRLWDIF
Ga0373959_0181764_157_444	3300034820	Rhizosphere Soil	VIFAITAAWAVGSAILLRRAAEQLRWRALSDLRRFRLLGQHSDIKRQTFDELIAEIGNIKTGAFAPLTEQPFVQAILYPGCGLGILAVAQRLLDI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066051

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences