Metagenome / Metatranscriptome Family F066049

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066049
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	62 residues
Representative Sequence	SCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNVEQNTATLRKS
Number of Associated Samples	113
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.38 %
% of genes near scaffold ends (potentially truncated)	96.06 %
% of genes from short scaffolds (< 2000 bps)	95.28 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (80.315 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.772 % of family members)
Environment Ontology (ENVO)	Unclassified (26.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.70% Coil/Unstructured: 59.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.38.1.5: PaaI/YdiI-like	d1ixla_	1ixl	0.75834
d.38.1.0: automated matches	d3lbea_	3lbe	0.75797
d.38.1.5: PaaI/YdiI-like	d3f5oa_	3f5o	0.7557
d.38.1.0: automated matches	d5buwa_	5buw	0.74341
d.38.1.0: automated matches	d3dkza_	3dkz	0.74029

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01381	HTH_3	25.98
PF00149	Metallophos	7.09
PF12697	Abhydrolase_6	3.94
PF07702	UTRA	1.57
PF00561	Abhydrolase_1	1.57
PF13361	UvrD_C	1.57
PF03807	F420_oxidored	0.79
PF13649	Methyltransf_25	0.79
PF00069	Pkinase	0.79
PF00440	TetR_N	0.79
PF03235	DUF262	0.79
PF07228	SpoIIE	0.79
PF00491	Arginase	0.79
PF01654	Cyt_bd_oxida_I	0.79
PF14016	DUF4232	0.79
PF01544	CorA	0.79
PF00425	Chorismate_bind	0.79
PF00805	Pentapeptide	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.15
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.79
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.79
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.79
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.79
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.17 %
Unclassified	root	N/A	19.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.23 %
Unclassified	root	N/A	19.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.36 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.24 %
Unclassified	root	N/A	19.69 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	2.36 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.79 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	27.56 %
Unclassified	root	N/A	19.69 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.15 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.36 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	2.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.57 %
Motilibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	27.56 %
Unclassified	root	N/A	19.69 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.15 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	2.36 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.36 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Motilibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae	0.79 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	27.56 %
Unclassified	root	N/A	19.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.15 %
unclassified Herpetosiphonaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae	2.36 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.36 %
Motilibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter	0.79 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	27.56 %
Unclassified	root	N/A	19.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.15 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	2.36 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.36 %
Motilibacter aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter aurantiacus	0.79 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	27.56 %
Unclassified	root	N/A	19.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.15 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	2.36 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.36 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.79 %
Motilibacter aurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter aurantiacus	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_11021503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300002245\|JGIcombinedJ26739_100902917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300005329\|Ga0070683_101663451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300005330\|Ga0070690_101171485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300005336\|Ga0070680_100510695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M
3300005338\|Ga0068868_101114538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300005435\|Ga0070714_100592199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300005436\|Ga0070713_100899291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300005438\|Ga0070701_10596961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300005438\|Ga0070701_10845855	Not Available	628	Open in IMG/M
3300005439\|Ga0070711_101395111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300005445\|Ga0070708_100597179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041	Open in IMG/M
3300005447\|Ga0066689_10668274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300005455\|Ga0070663_100858584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	782	Open in IMG/M
3300005555\|Ga0066692_10862780	Not Available	555	Open in IMG/M
3300005577\|Ga0068857_102513691	Not Available	506	Open in IMG/M
3300005614\|Ga0068856_100456605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1298	Open in IMG/M
3300005712\|Ga0070764_10332205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884	Open in IMG/M
3300005719\|Ga0068861_102257203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300006032\|Ga0066696_10602630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300006046\|Ga0066652_100760429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300006162\|Ga0075030_100988801	Not Available	663	Open in IMG/M
3300006173\|Ga0070716_101088904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300006175\|Ga0070712_100208261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300006237\|Ga0097621_101950330	Not Available	561	Open in IMG/M
3300006354\|Ga0075021_10249260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300006606\|Ga0074062_12523523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300006797\|Ga0066659_11664901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300006804\|Ga0079221_11078823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300006871\|Ga0075434_100813047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300006881\|Ga0068865_101015945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	727	Open in IMG/M
3300006903\|Ga0075426_10227279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300006903\|Ga0075426_10894349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300009525\|Ga0116220_10216851	Not Available	831	Open in IMG/M
3300009525\|Ga0116220_10373165	Not Available	635	Open in IMG/M
3300009545\|Ga0105237_11630894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300010320\|Ga0134109_10137660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300010366\|Ga0126379_13614697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300010373\|Ga0134128_10607762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300010373\|Ga0134128_11738608	Not Available	686	Open in IMG/M
3300010376\|Ga0126381_102533153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300010397\|Ga0134124_10228731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1701	Open in IMG/M
3300010876\|Ga0126361_11194196	Not Available	2300	Open in IMG/M
3300010880\|Ga0126350_11347499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2252	Open in IMG/M
3300010880\|Ga0126350_11977986	Not Available	1363	Open in IMG/M
3300012502\|Ga0157347_1071119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012515\|Ga0157338_1047200	Not Available	606	Open in IMG/M
3300012955\|Ga0164298_11168641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300013105\|Ga0157369_11540362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300013306\|Ga0163162_13078275	Not Available	536	Open in IMG/M
3300013307\|Ga0157372_10361436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1692	Open in IMG/M
3300014968\|Ga0157379_10324464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300015372\|Ga0132256_101784889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300016270\|Ga0182036_11656431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300016357\|Ga0182032_10141574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1766	Open in IMG/M
3300016357\|Ga0182032_11396624	Not Available	606	Open in IMG/M
3300016357\|Ga0182032_11421730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300016445\|Ga0182038_11488277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300017942\|Ga0187808_10493081	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300018001\|Ga0187815_10511955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300018060\|Ga0187765_11004530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300018085\|Ga0187772_10070423	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300018433\|Ga0066667_11330330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	629	Open in IMG/M
3300020081\|Ga0206354_11082875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	977	Open in IMG/M
3300020581\|Ga0210399_11588146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300021374\|Ga0213881_10497408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300021403\|Ga0210397_10399262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1027	Open in IMG/M
3300021403\|Ga0210397_10957267	Not Available	664	Open in IMG/M
3300021404\|Ga0210389_11370898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	540	Open in IMG/M
3300021478\|Ga0210402_10845593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter aurantiacus	841	Open in IMG/M
3300024222\|Ga0247691_1044979	Not Available	669	Open in IMG/M
3300025900\|Ga0207710_10562284	Not Available	595	Open in IMG/M
3300025901\|Ga0207688_10372998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300025914\|Ga0207671_11446499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300025916\|Ga0207663_10792608	Not Available	754	Open in IMG/M
3300025916\|Ga0207663_11438370	Not Available	555	Open in IMG/M
3300025929\|Ga0207664_11935905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300025940\|Ga0207691_10696448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300025961\|Ga0207712_10278990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1363	Open in IMG/M
3300026088\|Ga0207641_12242625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300027307\|Ga0209327_1036915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	690	Open in IMG/M
3300027725\|Ga0209178_1408306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300027817\|Ga0209112_10060781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300027855\|Ga0209693_10336500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300028716\|Ga0307311_10242237	Not Available	535	Open in IMG/M
3300028828\|Ga0307312_10184574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300028881\|Ga0307277_10544102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	521	Open in IMG/M
3300028906\|Ga0308309_10488076	Not Available	1064	Open in IMG/M
3300029701\|Ga0222748_1134120	Not Available	510	Open in IMG/M
3300030494\|Ga0310037_10368208	All Organisms → cellular organisms → Bacteria → Terrabacteria group	600	Open in IMG/M
3300030494\|Ga0310037_10487374	Not Available	501	Open in IMG/M
3300031544\|Ga0318534_10444014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300031564\|Ga0318573_10214118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300031564\|Ga0318573_10289962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	875	Open in IMG/M
3300031564\|Ga0318573_10411211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300031572\|Ga0318515_10049692	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300031681\|Ga0318572_10193928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1184	Open in IMG/M
3300031713\|Ga0318496_10201087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1095	Open in IMG/M
3300031724\|Ga0318500_10089395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1385	Open in IMG/M
3300031744\|Ga0306918_11230202	All Organisms → cellular organisms → Bacteria → Terrabacteria group	577	Open in IMG/M
3300031751\|Ga0318494_10720068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300031769\|Ga0318526_10168453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300031777\|Ga0318543_10237925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300031778\|Ga0318498_10354623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300031782\|Ga0318552_10359116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300031796\|Ga0318576_10484196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300031797\|Ga0318550_10288269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	796	Open in IMG/M
3300031799\|Ga0318565_10098160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1403	Open in IMG/M
3300031799\|Ga0318565_10409302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300031805\|Ga0318497_10234738	Not Available	1016	Open in IMG/M
3300031819\|Ga0318568_10413571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300031835\|Ga0318517_10420511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300031859\|Ga0318527_10104094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1167	Open in IMG/M
3300031897\|Ga0318520_10101177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1617	Open in IMG/M
3300031954\|Ga0306926_11218151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	883	Open in IMG/M
3300032009\|Ga0318563_10345968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	804	Open in IMG/M
3300032052\|Ga0318506_10365361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	640	Open in IMG/M
3300032054\|Ga0318570_10355321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300032067\|Ga0318524_10171159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1104	Open in IMG/M
3300032068\|Ga0318553_10506904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300032180\|Ga0307471_101987915	Not Available	729	Open in IMG/M
3300032205\|Ga0307472_100478687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300032892\|Ga0335081_10142288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3451	Open in IMG/M
3300032892\|Ga0335081_12522652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300032955\|Ga0335076_10502041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1096	Open in IMG/M
3300033158\|Ga0335077_12018514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.10%
Host-Associated	Host-Associated	18.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.95%
Plants	Host-Associated → Plants	18.90%
Aquatic	Environmental → Aquatic	3.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.09%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Sediment	Environmental → Aquatic → Sediment	1.57%
Roots	Host-Associated → Plants → Roots	1.57%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.91%
Loam	Environmental → Terrestrial → Soil → Loam	16.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.57%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.57%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_110215031	3300001686	Soil	AHETDQDCVNTLTLTRATSAVMVFSEPGTPACVAGTVTFTRHGTGLAYRWTDNVEQNTAILRKS*
JGIcombinedJ26739_1009029172	3300002245	Forest Soil	NDTCVNTLTLTQVTAKRLTFSEPATPECVPGTVTFSRHGARLAYRWTNNIEQNTALLARS
Ga0070683_1016634511	3300005329	Corn Rhizosphere	DEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKS*
Ga0070690_1011714852	3300005330	Switchgrass Rhizosphere	TIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS*
Ga0070680_1005106953	3300005336	Corn Rhizosphere	DQDSYGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGAGLAYRWTDNVEQNTATLRKS*
Ga0068868_1011145381	3300005338	Miscanthus Rhizosphere	RTIHETDEDSYGGSCVNTLTLREATTTVLTFDEPQTGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKS*
Ga0070714_1005921994	3300005435	Agricultural Soil	DEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS*
Ga0070713_1008992911	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	CVNTLTLREATATVLTFDEPQTGGCVAGTVTFTHRGDGLAYRWTDDIQQNTATLRKS*
Ga0070701_105969613	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	SCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNVEQNTATLRKS*
Ga0070701_108458551	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	DEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA*
Ga0070711_1013951112	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTTMFTRHGTSLAYRWTDNIEQNTATLRKS*
Ga0070708_1005971791	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SCVNTLTLREATATVLTFDEPQAGGCVAGTVTFTRHGTGLAYRWTDNIEQNTATLRNS*
Ga0066689_106682741	3300005447	Soil	VNTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGASLAYRWTDNIEQNTATLRKS*
Ga0070663_1008585841	3300005455	Corn Rhizosphere	HETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA*
Ga0066692_108627801	3300005555	Soil	DSYGGNCVNTLTLREATATVLTFDEPQTGGCVAGTVTFTHRGGSLAYRWTDNIQQNTATLRKS*
Ga0068857_1025136911	3300005577	Corn Rhizosphere	EDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA*
Ga0068856_1004566054	3300005614	Corn Rhizosphere	VNTLTLREATTTVLTFDEPQTGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKS*
Ga0070764_103322052	3300005712	Soil	GARTIHEVNDTCVNTLTLSQVTAKRLTFSEPATPECVAGTVTFSRHGARLAYRWTNNIEQNTALLAKS*
Ga0068861_1022572032	3300005719	Switchgrass Rhizosphere	TDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS*
Ga0066696_106026303	3300006032	Soil	SCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRDGTSLAYRWTDNVEQNTATLRRS*
Ga0066652_1007604291	3300006046	Soil	LTLREATATVLTFDEPQAGGCVAGTVTFTRRGAGLAYRWTDHIEQNTATLRRS*
Ga0075030_1009888012	3300006162	Watersheds	ENNQECVNTLTLTRATATALTFSEPQTAQCVAGTVTFTRQGANLAYQWTDNIEQNVATLRKS*
Ga0070716_1010889041	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ETDQDSFGGNCVNTLTLREATTTVLTFDEPQTGGCVAGTVTFTHRGGSLAYRWTDNIQQNTATLHKS*
Ga0070712_1002082615	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	CVNTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGASLAYRWTDNIEQNTATLHKP*
Ga0097621_1019503301	3300006237	Miscanthus Rhizosphere	CVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA*
Ga0075021_102492601	3300006354	Watersheds	AGGRTAQENNQDCVNTLTLTGVTATALTFSEPQTAQCVAGMVTFTRQGANLAYRWTDNIEQNVATLRKS*
Ga0074062_125235233	3300006606	Soil	DEDSYGGSCVNTLTLRQATATVLTFDEPQAGGCVAGTATFTRHGTGLAYRWTDNMEQNTATLRKS*
Ga0066659_116649012	3300006797	Soil	HEVNEDCINTLTLTKRTATVLTFDEPQVAGHCQAGTVTFSRHGAGLSYRWVDIAGQAQNTATLRHG*
Ga0079221_110788231	3300006804	Agricultural Soil	VNTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGASLAYRWTDNIEQNTATLHKP*
Ga0075434_1008130471	3300006871	Populus Rhizosphere	RTIHETDEDSYGGSCINTLTLRVATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS*
Ga0068865_1010159451	3300006881	Miscanthus Rhizosphere	TIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSVAYRWTDNIEQNTATLRKS*
Ga0075426_102272791	3300006903	Populus Rhizosphere	SYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTTMFTRHGTSLAYRWTDNIEQNTATLRKS*
Ga0075426_108943492	3300006903	Populus Rhizosphere	DSYGGSCVNTLTLREATATVLTFDEPRAGGCVGGTVTFTRHGAGLAYRWTDNVEQNTATLRKS*
Ga0116220_102168511	3300009525	Peatlands Soil	LTLSEVTATVLTFSEPQTAACVAGTVTFTRHGVNLAYRWTDNIEQNVATLQKA*
Ga0116220_103731651	3300009525	Peatlands Soil	NTLTLTGQTATVLTFSEPGTLECVAGTVTFTRHGADLAYRWTDNVEQNTALLHKT*
Ga0105237_116308943	3300009545	Corn Rhizosphere	CVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSVAYRWTDNIEQNTATLRKS*
Ga0134109_101376601	3300010320	Grasslands Soil	ARTIHETDQDSLGGPCVNTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGASLAYRWTDNIEQNTATLRKS*
Ga0126376_115833013	3300010359	Tropical Forest Soil	LREATATVLTFDEPQAGGCVAGTTTLTRHGTGLVYRWTDNIEQNTATLRKS*
Ga0126379_136146972	3300010366	Tropical Forest Soil	GSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRRGTSLAYRWTDNVEQNTATLRKS*
Ga0134128_106077621	3300010373	Terrestrial Soil	SCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTKRGAGLAYRWTDNVEQNTATLRKS*
Ga0134128_117386081	3300010373	Terrestrial Soil	RTIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNVEQNTATLRKS*
Ga0126381_1025331532	3300010376	Tropical Forest Soil	LTLTEATATVLTFDEPQAGGCVAGTVTLTRQGDGLAYRWTDSIEENTATLRKG*
Ga0134124_102287313	3300010397	Terrestrial Soil	RTIHETDEDSYGGSCVNTLTLRAATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA*
Ga0126361_111941963	3300010876	Boreal Forest Soil	ENEAGGCVNTLTLTSATAGGLTFSEPEAGGCVAGTVTFTRHGATLAYRWTDNVEQETATLREG*
Ga0126350_113474991	3300010880	Boreal Forest Soil	QSCVNTLTLSQETATVLTFSEPGTAACVAGTVTFTRHGASLAYRWTDNIEQNTATLRPG*
Ga0126350_119779862	3300010880	Boreal Forest Soil	MAAGGTTAAENEAGGCVNTLTLTGTTATVLTFSEPQAGGCVAGTVTFTRQGTGLAYRWTDNVEQETATLSKS*
Ga0157347_10711191	3300012502	Arabidopsis Rhizosphere	TLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKS*
Ga0157338_10472001	3300012515	Arabidopsis Rhizosphere	IHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA*
Ga0164298_111686412	3300012955	Soil	YGGSCVNTLTLREATATVLTFDEPQAGGCVAGTTMFTRHGTSLAYRWTDNIEQNTATLRKS*
Ga0157369_115403621	3300013105	Corn Rhizosphere	HETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS*
Ga0163162_130782751	3300013306	Switchgrass Rhizosphere	GGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDKVEQNTATLRKS
Ga0157372_103614361	3300013307	Corn Rhizosphere	HETDRDSYGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGAGLAYRWTDNVEQNTATLRKS*
Ga0157379_103244641	3300014968	Switchgrass Rhizosphere	ERTIHETDQDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNVEQNTATLRKS*
Ga0132256_1017848893	3300015372	Arabidopsis Rhizosphere	ETDEDNYGGSCVNTLTLREATATALTFDEPQAGGCVAGTTTFTRHGTGLVYRWTDNIEQNTATLRKS*
Ga0182036_116564311	3300016270	Soil	GGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGSGLAYRWTDNIEQNTATLREG
Ga0182032_101415743	3300016357	Soil	AHEENQDCVNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0182032_113966241	3300016357	Soil	ARTIHETDQDSFGGSCVNTLTLTEATTTVLTFDEPQAGGCVAGTVTFTRQGDGLAYRWTDNIEQNTATLHKG
Ga0182032_114217301	3300016357	Soil	ATGARTAHEVNQECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0182038_114882771	3300016445	Soil	ARMARTAHEVNQECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0187808_104930812	3300017942	Freshwater Sediment	GARTIAETNQSCVNTLTLTSQSGQVLTFSEPQTTQCVAGTVTFTQHGADLAYRWTDNVEQNIGLLHKT
Ga0187815_105119552	3300018001	Freshwater Sediment	ARTIAETNQSCVNTLTLTSQSGQVLTFSEPQTTQCVAGTVTFTQHGADLAYRWTDNVEQNVGLLHKT
Ga0187765_110045302	3300018060	Tropical Peatland	GTCVNTLTLTEATATVLTFDEPQAGGCVAGTVTFTRQGDGLAYRWTDSIEQNTANLRKS
Ga0187772_100704232	3300018085	Tropical Peatland	VEQQSINTLALSQVTATVLTFSEPATLECVAGTVTFTMHGADLACRWT
Ga0066667_113303301	3300018433	Grasslands Soil	NTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGAGLAYRWTDHIEQNTATLRRS
Ga0206354_110828754	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	ETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKS
Ga0210399_115881462	3300020581	Soil	VNTLTLAEATDTVLTFDEPQAGGCVAGTVTFTRHGSNLAYRWTDNIEQNTAILSKG
Ga0213881_104974082	3300021374	Exposed Rock	VNTLTLTSATATVLTFSEPQTPACVAGTVTFTRHGAGLTYRWTDNIEQNVGTLRMS
Ga0210397_103992623	3300021403	Soil	NTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGAGLAYRWTDNIEQNTATLRKS
Ga0210397_109572671	3300021403	Soil	GARTVHEVNDTCVNTLTLSQVTAKRLTFSEPATPECVAGTVTFSRHGAHLAYRWTNNIEQNTALLAKS
Ga0210389_113708982	3300021404	Soil	YGGSCVNTLTLREVTATVLTFDEPQTGGCVAGTVTFRRQGASLAYRWTDNIEQNTATLRK
Ga0210402_108455932	3300021478	Soil	GNCVNTLPLREATATVLTFDEPQTGGCVAGTVTFTHRGDGLAYRWTDDIQQNTAPLRKS
Ga0247691_10449792	3300024222	Soil	TIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA
Ga0207710_105622841	3300025900	Switchgrass Rhizosphere	DEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA
Ga0207688_103729983	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNVEQNTATLRKS
Ga0207671_114464991	3300025914	Corn Rhizosphere	TDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSVAYRWTDNIEQNTATLRKS
Ga0207663_107926081	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKA
Ga0207663_114383701	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DSFGGNCVNTLTLREATATVLTFDEPQAGGCVAGTVTFTRRGSSLAYRWTDNIEQNTATLRKS
Ga0207664_119359051	3300025929	Agricultural Soil	YGGNCVNTLTLREATATVLTFDEPQTGGCVAGTVTFTHRGDSLAYRWTDNIEQNTATLRK
Ga0207691_106964482	3300025940	Miscanthus Rhizosphere	TIHETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS
Ga0207712_102789904	3300025961	Switchgrass Rhizosphere	EDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRKS
Ga0207641_122426252	3300026088	Switchgrass Rhizosphere	HETDRDSYGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGAGLAYRWTDNVEQNTATLRKS
Ga0209327_10369152	3300027307	Forest Soil	LTLRGGTGALLTFSEPQTSACVAGTVTLTLKGASLAYRWTDNVEQNTGNLAHG
Ga0209178_14083062	3300027725	Agricultural Soil	NTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGAGLAYRWTDNVEQNTATLRKS
Ga0209112_100607813	3300027817	Forest Soil	SYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTTTFTRHGTSLAYRWTDNIEQNTATLRKS
Ga0209693_103365001	3300027855	Soil	AHENNQDCVNTLTLSQVTTTVLTFSEPQTPACEGGTVTFTRHGADLAYHWIDQARLAQSNATLHKA
Ga0307311_102422372	3300028716	Soil	HETDEDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNIEQNTATLRKS
Ga0307312_101845742	3300028828	Soil	YGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNVEQNTATLRK
Ga0307277_105441022	3300028881	Soil	EDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTRHGTSLAYRWTDNIEQNTATLRKS
Ga0308309_104880761	3300028906	Soil	TAHEVDDSCVNTLTLSQGTATTLTFSEPGTSACVAGTVTLTRQGANLAYRWTDNVEQNTGTLSHG
Ga0222748_11341202	3300029701	Soil	ENEAGGCVNTLTLTSTTATVLTFSEPEAGGCVAGTVTFTRQGAALAYRWTNNVEQETATLSKS
Ga0310037_103682082	3300030494	Peatlands Soil	TAHEVNQDCINTLTLSEVTATVLTFSEPQTAACVAGTVTFTRHGANLAYRWTDNIEQNVATLQKA
Ga0310037_104873742	3300030494	Peatlands Soil	VNQDCINTLTLSQVTATVLTFSEPQTTSCVAGTVTFTRRGANLAYRWTGGGEQNVATLRK
Ga0318534_104440143	3300031544	Soil	ARTAHEVNQECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0318573_102141184	3300031564	Soil	DSYGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGSGLAYRWTDNIEQNTATLREG
Ga0318573_102899621	3300031564	Soil	IHETDQDSYGGMCVNTLTLTEATATVLTFDEPQAGGCVAGTVTFTRQGDGLAYRWTDNIEQNTATLHKG
Ga0318573_104112111	3300031564	Soil	CVNTLTLRESTATALTFDEPQAGGCVAGTVTFTRQGGDLAYRWTDNIEQNIATLRQA
Ga0318515_100496921	3300031572	Soil	GARTAHEENQDCVNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0318572_101939284	3300031681	Soil	TLRESTATALTFDEPQAGGCVAGTVTFTRQGGDLAYRWTDNIEQNTATLRQA
Ga0318496_102010874	3300031713	Soil	ECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0318500_100893951	3300031724	Soil	VNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0306918_112302021	3300031744	Soil	ARTAHEENQDCVNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0318494_107200682	3300031751	Soil	VNTLTLTAATAAVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKQ
Ga0318526_101684531	3300031769	Soil	AQTIHETDQDSYGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGSGLAYRWTDNIEQNTATLREG
Ga0318543_102379253	3300031777	Soil	YGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGSGLAYRWTDNIEQNTATLRE
Ga0318498_103546232	3300031778	Soil	QECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0318552_103591161	3300031782	Soil	VNQECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRK
Ga0318576_104841961	3300031796	Soil	HETDQDSYGGSCVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGSGLAYRWTDNIEQNTATLREG
Ga0318550_102882691	3300031797	Soil	NQDCVNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0318565_100981605	3300031799	Soil	TAHEVNQECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0318565_104093021	3300031799	Soil	CVNTLTLTEATATVLTFDEPQAGGCVAGTVTFTRQGDGLAYRWTDSIEQNTAILRKG
Ga0318497_102347383	3300031805	Soil	ARTIHETDQDSYGGSCVNTLTLRESTATALTFDEPQAGGCVAGTVTFTRQGGDLAYRWTDNIEQKIATLRQA
Ga0318568_104135711	3300031819	Soil	NQECVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGADLAYRWTDNIEQNIATLRKR
Ga0318517_104205112	3300031835	Soil	TLRESTATALTFDEPQAGGCVAGTVTFTRQGGDLAYRWTDNIEQNIATLRQA
Ga0318527_101040942	3300031859	Soil	MCVNTLTLTEATATVLTFDEPQAGGCVAGTVTFTRQGDGLAYRWTDNIEQNTATLHKG
Ga0318520_101011773	3300031897	Soil	EENQDCVNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0306926_112181511	3300031954	Soil	CVNTLTLREATATVLTFDEPQAGGCVGGTVTFTRHGSGLAYRWTDNIEQNTATLREG
Ga0318563_103459681	3300032009	Soil	LTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0318506_103653611	3300032052	Soil	HEENQDCVNTLTLTRATDTVLVFSEPQTASCVAGTATFTRHGSSLAYRWTDNIEQNTATLRKS
Ga0318570_103553211	3300032054	Soil	TLTSATDTVMVFSEPQTPACVAGTVTFTRHGANLAYRWTDNIEQNTATLHRA
Ga0318524_101711594	3300032067	Soil	GARTAHEVNQECVNTLTLTAATATVLTFSEPQTAACAAGTVTFTRHGADLAYRWTDNIEQNTATLRKQ
Ga0318553_105069041	3300032068	Soil	SCVNTLTLRESTATALTFDEPQAGGCVAGTVTFTRQGGDLAYRWTDNIEQNIATLRQA
Ga0307471_1019879152	3300032180	Hardwood Forest Soil	YGGSCVNTLTLREATATVLTIDEPQAGGCVAGTATFTQRGTSLAYRWTDNIEQNTATLRK
Ga0307472_1004786871	3300032205	Hardwood Forest Soil	EDSYGGSCVNTLTLREATATVLTFDEPQAGGCVAGTATFTQHGTSLAYRWTDNIEQNTATLRKS
Ga0335081_101422881	3300032892	Soil	TGARTAHEVNQDCVNTLTLTAATATVLTFSEPQTAACVAGTVTFTRHGAGLAYRWTDNIEQNTATLRKQ
Ga0335081_125226522	3300032892	Soil	EVNQDCVNTLTLTGATATVLTFSEPQTAACVAGTVTFTRHGGDLAYRWTDNIEQNVATLRKS
Ga0335076_105020414	3300032955	Soil	TLTEATANVLTFDEPQAGGCVAGTVTFTRQGDGLAYRWTDSIEQNTATLRQG
Ga0335077_120185141	3300033158	Soil	GARTIHETDQDSYGGSCVNTLTLRESTATALTFDEPQAGGCVAGTVTFTRQGANLAYRWTDNIEQNTATLRQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066049

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences