NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F066028

Metagenome / Metatranscriptome Family F066028

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066028
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 73 residues
Representative Sequence MTVSFQQAAIKVEKAQEFARLQAAVEQAFLPEKVERFLKQLDRKGIRVRDFDAVLAARLLEEAAG
Number of Associated Samples 119
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.92 %
% of genes near scaffold ends (potentially truncated) 95.28 %
% of genes from short scaffolds (< 2000 bps) 93.70 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.339 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.173 % of family members)
Environment Ontology (ENVO) Unclassified
(29.134 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.906 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.01%    β-sheet: 0.00%    Coil/Unstructured: 56.99%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF00009GTP_EFTU 2.36
PF02687FtsX 0.79
PF02683DsbD 0.79
PF03544TonB_C 0.79
PF13432TPR_16 0.79
PF05496RuvB_N 0.79
PF01288HPPK 0.79
PF12704MacB_PCD 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG08017,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)Coenzyme transport and metabolism [H] 0.79
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.79
COG2255Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvBReplication, recombination and repair [L] 0.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.34 %
UnclassifiedrootN/A8.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003369|JGI24140J50213_10173566All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300004138|Ga0058905_1002272All Organisms → cellular organisms → Bacteria → Acidobacteria859Open in IMG/M
3300004295|Ga0068932_1352071All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300004469|Ga0068931_1312034All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300004471|Ga0068965_1336438All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300004474|Ga0068968_1504814All Organisms → cellular organisms → Bacteria → Acidobacteria1234Open in IMG/M
3300004474|Ga0068968_1507330All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300004477|Ga0068971_1581554All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300004610|Ga0068927_1370359All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300004612|Ga0068961_1371780All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300004619|Ga0068953_1465058All Organisms → cellular organisms → Bacteria → Acidobacteria1441Open in IMG/M
3300004631|Ga0058899_12282684All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300004972|Ga0072325_1324996All Organisms → cellular organisms → Bacteria → Acidobacteria893Open in IMG/M
3300005177|Ga0066690_11024346All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300005434|Ga0070709_11024527All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300005533|Ga0070734_10618368All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300005587|Ga0066654_10284078All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7881Open in IMG/M
3300006028|Ga0070717_11644719All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300006046|Ga0066652_100941433All Organisms → cellular organisms → Bacteria → Acidobacteria822Open in IMG/M
3300006174|Ga0075014_100273653All Organisms → cellular organisms → Bacteria → Acidobacteria880Open in IMG/M
3300006806|Ga0079220_10566773All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300006893|Ga0073928_10886025All Organisms → cellular organisms → Bacteria → Acidobacteria612Open in IMG/M
3300008784|Ga0103637_1002917All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300009029|Ga0066793_10747121All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300009522|Ga0116218_1040898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2096Open in IMG/M
3300009633|Ga0116129_1183411All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300009634|Ga0116124_1095949All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7840Open in IMG/M
3300009635|Ga0116117_1205761All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300009672|Ga0116215_1199216Not Available882Open in IMG/M
3300010101|Ga0127481_1110317Not Available1244Open in IMG/M
3300010343|Ga0074044_10331700All Organisms → cellular organisms → Bacteria → Acidobacteria999Open in IMG/M
3300010361|Ga0126378_11531862All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300010376|Ga0126381_100151073All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae3049Open in IMG/M
3300010866|Ga0126344_1164269All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300011062|Ga0138582_1124663All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300011071|Ga0138595_1090999All Organisms → cellular organisms → Bacteria → Acidobacteria943Open in IMG/M
3300011080|Ga0138568_1090526All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300011089|Ga0138573_1279925All Organisms → cellular organisms → Bacteria → Acidobacteria1002Open in IMG/M
3300011120|Ga0150983_11434864All Organisms → cellular organisms → Bacteria → Acidobacteria1478Open in IMG/M
3300011120|Ga0150983_15820819All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300012350|Ga0137372_10818129All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300013296|Ga0157374_12129341All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300014167|Ga0181528_10394661All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300014655|Ga0181516_10313630All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae798Open in IMG/M
3300016705|Ga0181507_1057543All Organisms → cellular organisms → Bacteria → Acidobacteria2460Open in IMG/M
3300017930|Ga0187825_10411647All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300017935|Ga0187848_10114310All Organisms → cellular organisms → Bacteria → Acidobacteria1216Open in IMG/M
3300017943|Ga0187819_10857709All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300017948|Ga0187847_10238295All Organisms → cellular organisms → Bacteria → Acidobacteria991Open in IMG/M
3300017972|Ga0187781_10528467Not Available848Open in IMG/M
3300018004|Ga0187865_1065976All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA71400Open in IMG/M
3300018006|Ga0187804_10105029All Organisms → cellular organisms → Bacteria → Acidobacteria1163Open in IMG/M
3300018021|Ga0187882_1375369Not Available540Open in IMG/M
3300019174|Ga0184579_111264All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300019180|Ga0184578_132703Not Available512Open in IMG/M
3300019260|Ga0181506_1369120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1301Open in IMG/M
3300019270|Ga0181512_1199759All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300019890|Ga0193728_1173277All Organisms → cellular organisms → Bacteria → Acidobacteria929Open in IMG/M
3300020070|Ga0206356_10521118Not Available762Open in IMG/M
3300021170|Ga0210400_11034711All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300021402|Ga0210385_11575989All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300021407|Ga0210383_10396590All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1190Open in IMG/M
3300021478|Ga0210402_10318809All Organisms → cellular organisms → Bacteria → Acidobacteria1440Open in IMG/M
3300021479|Ga0210410_11584531All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300021559|Ga0210409_10666659All Organisms → cellular organisms → Bacteria → Acidobacteria910Open in IMG/M
3300022505|Ga0242647_1018791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300022507|Ga0222729_1012700All Organisms → cellular organisms → Bacteria → Acidobacteria909Open in IMG/M
3300022508|Ga0222728_1009590All Organisms → cellular organisms → Bacteria → Acidobacteria1235Open in IMG/M
3300022508|Ga0222728_1029980All Organisms → cellular organisms → Bacteria → Acidobacteria836Open in IMG/M
3300022512|Ga0242676_1002691All Organisms → cellular organisms → Bacteria → Acidobacteria1263Open in IMG/M
3300022513|Ga0242667_1040254All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300022522|Ga0242659_1069923All Organisms → cellular organisms → Bacteria → Acidobacteria652Open in IMG/M
3300022532|Ga0242655_10206432All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300022721|Ga0242666_1067125All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7784Open in IMG/M
3300023012|Ga0228597_102991All Organisms → cellular organisms → Bacteria → Acidobacteria858Open in IMG/M
3300023678|Ga0247538_101933All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae838Open in IMG/M
3300025406|Ga0208035_1001096All Organisms → cellular organisms → Bacteria → Acidobacteria4306Open in IMG/M
3300025406|Ga0208035_1016601All Organisms → cellular organisms → Bacteria → Acidobacteria1193Open in IMG/M
3300025414|Ga0208935_1001250All Organisms → cellular organisms → Bacteria → Acidobacteria4234Open in IMG/M
3300027030|Ga0208240_1034632All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300027869|Ga0209579_10340712All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300028572|Ga0302152_10076030All Organisms → cellular organisms → Bacteria → Acidobacteria1049Open in IMG/M
3300028795|Ga0302227_10135752All Organisms → cellular organisms → Bacteria → Acidobacteria983Open in IMG/M
3300028871|Ga0302230_10356458All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300028871|Ga0302230_10385857All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300028879|Ga0302229_10059395All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA71879Open in IMG/M
3300029882|Ga0311368_10015457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium7540Open in IMG/M
3300029908|Ga0311341_10347186All Organisms → cellular organisms → Bacteria → Acidobacteria870Open in IMG/M
3300029910|Ga0311369_10295330All Organisms → cellular organisms → Bacteria → Acidobacteria1449Open in IMG/M
3300029914|Ga0311359_10300668All Organisms → cellular organisms → Bacteria → Acidobacteria1326Open in IMG/M
3300029953|Ga0311343_10350536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1395Open in IMG/M
3300029982|Ga0302277_1340506All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300029999|Ga0311339_10703979All Organisms → cellular organisms → Bacteria → Acidobacteria987Open in IMG/M
3300030043|Ga0302306_10105205All Organisms → cellular organisms → Bacteria → Acidobacteria1093Open in IMG/M
3300030044|Ga0302281_10233474Not Available757Open in IMG/M
3300030051|Ga0302195_10271321All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300030518|Ga0302275_10214014All Organisms → cellular organisms → Bacteria → Acidobacteria1129Open in IMG/M
3300030598|Ga0210287_1176448Not Available575Open in IMG/M
3300030730|Ga0307482_1026908All Organisms → cellular organisms → Bacteria → Acidobacteria1250Open in IMG/M
3300030889|Ga0265761_101968All Organisms → cellular organisms → Bacteria → Acidobacteria937Open in IMG/M
3300030937|Ga0138302_1048518All Organisms → cellular organisms → Bacteria → Acidobacteria1509Open in IMG/M
3300030963|Ga0265768_111566All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300030975|Ga0099845_1591395All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300031018|Ga0265773_1030799All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300031247|Ga0265340_10346912All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300031446|Ga0170820_10194085All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300031708|Ga0310686_111799099All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300031708|Ga0310686_116137570All Organisms → cellular organisms → Bacteria → Acidobacteria935Open in IMG/M
3300031715|Ga0307476_11312545All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300031718|Ga0307474_10309634All Organisms → cellular organisms → Bacteria → Acidobacteria1217Open in IMG/M
3300031753|Ga0307477_10472217All Organisms → cellular organisms → Bacteria → Acidobacteria854Open in IMG/M
3300031823|Ga0307478_11688564All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300031938|Ga0308175_100834423All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA71010Open in IMG/M
3300031955|Ga0316035_101589All Organisms → cellular organisms → Bacteria → Acidobacteria1364Open in IMG/M
3300032119|Ga0316051_1032438All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300032121|Ga0316040_101127All Organisms → cellular organisms → Bacteria → Acidobacteria1344Open in IMG/M
3300032160|Ga0311301_12212437All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300032515|Ga0348332_10441708All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300032515|Ga0348332_11327203All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300033134|Ga0335073_11090469All Organisms → cellular organisms → Bacteria → Acidobacteria815Open in IMG/M
3300033158|Ga0335077_11581023All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300033475|Ga0310811_10119296All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3382Open in IMG/M
3300033547|Ga0316212_1024559All Organisms → cellular organisms → Bacteria → Acidobacteria845Open in IMG/M
3300034124|Ga0370483_0275333Not Available578Open in IMG/M
3300034163|Ga0370515_0325708Not Available649Open in IMG/M
3300034163|Ga0370515_0360807All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil13.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.24%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.30%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.51%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog5.51%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.94%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.36%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.36%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.57%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.57%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.57%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.57%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.57%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.79%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.79%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.79%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.79%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.79%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.79%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.79%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.79%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.79%
RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Roots0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.79%
Wetland SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003369Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22AEnvironmentalOpen in IMG/M
3300004138Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004295Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004469Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004471Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004474Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004477Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004610Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004612Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004619Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004972Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300008784Microbial communities from wetland soil in Czech Republic - M1_cDNAEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009634Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150EnvironmentalOpen in IMG/M
3300009635Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300010101Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011062Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011071Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011080Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011089Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300016705Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300019174Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019180Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023012Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4EnvironmentalOpen in IMG/M
3300023678Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025406Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027030Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028572Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1EnvironmentalOpen in IMG/M
3300028795Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029982Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030044Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2EnvironmentalOpen in IMG/M
3300030051Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2EnvironmentalOpen in IMG/M
3300030518Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2EnvironmentalOpen in IMG/M
3300030598Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030889Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030937Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030963Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030975Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031018Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031955Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032121Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033547Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1Host-AssociatedOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24140J50213_1017356633300003369Arctic Peat SoilMTVIFQKAAIKIEKAEEYARLQKAVEQAFLPEKAKGFLKQLDRKGIRVRDFDAVLAQRLLEGVAGDSGLDARPLYHSGRE*
Ga0058905_100227253300004138Forest SoilMGFEQATIKIERQQEFGKLQAAVEQAFLPEKVERFLKQLDRKGIRVREFDAVLAARLLEGVAGVAAASSGLSAWQLYQAL
Ga0068932_135207123300004295Peatlands SoilMTVTFEQAAIKVEKAQEFARLQAAVEQAFLPDKVERFLKLLDRNGIRIRDFDGVLAQRMLEAVNGEPGLSARQ
Ga0068931_131203433300004469Peatlands SoilMTVSFQQAAIKVEKAQEFARLQAAVEQAFLPEKVERFLKQLDRKGIRVRNFDAVLTQRLLEDAVGEAGLNARQLYESLPVS
Ga0068965_133643833300004471Peatlands SoilMSFEQAAIKVEKPEEFAKLQAAVEQAFLPETVERFLKQLDRKGIRVREFDSVLSARALEDATGAASRTDLSAWQLYQELPLSD
Ga0068968_150481413300004474Peatlands SoilMTVTFEQAAIKVEKAQEFARLQAAVEQAFLPDKVERFLKLLDRNGIRIRDFDGVLAQRMLEAVNGE
Ga0068968_150733013300004474Peatlands SoilMSFEQAAIKVEKPEEFAKLQAAVEQAFLPETVERFLKQLDRKGIRVREFDSVLSARALEDATGAASR
Ga0068971_158155433300004477Peatlands SoilMSFEQAAIKVEKPEEFAKLQAAVEQAFLPETVERFLKQLDRKGIRVREFDSVLSARALEDATGAASRTDLS
Ga0068927_137035933300004610Peatlands SoilMSFEQAAIKVEKPEEFAKLQAAVEQAFLPETVERFLKQLDRKGIRVREFDSVLSARALE
Ga0068961_137178013300004612Peatlands SoilMSFEQAAIKVEKPEEFAKLQAAVEQAFLPETVERFLKQLDRKGIRVREFDSVLSARALEDATGAASRT
Ga0068953_146505813300004619Peatlands SoilMTVSFQQAAIKVEKAQEFARLQAAVEQAFLPQKVERFLKQLDRKGIRVRNFDAVLAQRLLENTVGEAGSGESQMNAR
Ga0058899_1228268413300004631Forest SoilMTVSFEQAAIKIEKQQEFAKLQAAVEQAFLPEKVERFLKQLDRKGIRVREFDGVLAARVLEDAACGSAVSSG
Ga0072325_132499613300004972Peatlands SoilMTVSFQQAAIKVEKAQEFARLQAAVEQAFLPEKVERFLKQLDRKGIRVRDFDAVLAARLLEEAAG
Ga0066690_1102434633300005177SoilMTVGFEQAAIKVDKTDEFAKLQSAVDQVFLPEKVERFLKQLDLKGIRVRNFDAVLAARALEDAAGESQAS
Ga0070709_1102452733300005434Corn, Switchgrass And Miscanthus RhizosphereMTVIFEKAAIKIEKAQEYAKLQGVIEQAFSPDKVEQFLKQLDRKGIRIRNVDAVLAEKVLERFGEPGLNAQLLYQALPLSDQAQIRE
Ga0070734_1061836813300005533Surface SoilMAFEQATIKIENAQEFARLQAALEQAFLPEHTERFLKQMDRKGIRIRNFDGVLAERVLEGFAEAGLNAQQLYQSL
Ga0066654_1028407853300005587SoilVVFEQAAIKVEKAQEFARLRAAVEQAFLPEKAERFLKQLDRKGIRVRDFDAVLAQRLLEG
Ga0070717_1164471913300006028Corn, Switchgrass And Miscanthus RhizosphereMNFQQAAIRIEKAEEFAKLQAAVEQAFLPEKTERFLKQLDGKGVRVRDFNAILAKQVLESVGESG
Ga0066652_10094143313300006046SoilMTVGFEQAAIKVERTQEFARLQAAIEQAFLPDKVEQFLKQLDRKGIRIRNVDAVLAQKVLERFGE
Ga0075014_10027365343300006174WatershedsMTVVFQKAAIKIEKAEEYARLQKAVEQAFLPEKAQGFLKQLDRKGIRVRDFDAVLAQRLLEGVAGDSGLDARQLYQ
Ga0079220_1056677353300006806Agricultural SoilMTVIFEKAAIKIEKAQEYAKLQGVIEQAFSPDKVEQFLKQLDRKGIRIRNVDAVLAEKVLERFGEPGLNAQQLYQALPLSDQA
Ga0073928_1088602513300006893Iron-Sulfur Acid SpringMTVGFEQATIKVQKEAEFRKLQAAIEQAFLPEKAERFLKHLSRKGIRVREFDGVLAARAL
Ga0103637_100291713300008784Wetland SoilMTVAFEQAAIKVQKAQEFARLQGAIEQAFLPEKVERFLKQLDRKGIRVRNFDAVLAQRVLEGFGEANTKKYTDKHIKKSKKN
Ga0066793_1074712133300009029Prmafrost SoilMTVSFQQGVIKIEKAQEFAGLRKAVEQAFLPEKAERFLKQLDRKGIRVRDFDAVLARRLLEGIAGDAGLNARQL
Ga0116218_104089813300009522Peatlands SoilMTVSFERVPIKVEREQEFARLQAAVEQAFLPGKVEPFLKQLDRKGIRVRNFDAVLVQRLLEGVVGEAGLEAKHLYESLPVSD
Ga0116129_118341113300009633PeatlandMGFEQATIKIQNEAQFRQLQGAVEQAFLPDKTERFLKQLDRKGVRVRDFDGVLAAQALEDAAGKQAGLR
Ga0116124_109594913300009634PeatlandMGFEQATIKVQKDEEFAKLQAAVGQAFLPAKAERFLKRLSRKGIRIRDFDGVLVARALEDAAGSQAGLSAWQLYQALPVSDQAQ
Ga0116117_120576133300009635PeatlandMREGFEQATIKIEKPQEFAKLQAAVEQAFLPEKVERFLKQLDRKGIRVREFDAVLSARLLEGAGSGAADSGLSAWQLYQ
Ga0116215_119921643300009672Peatlands SoilMGFEQAAIKVEKAQEFAKLQAAVQQTFLPETVERFLKLLDRKGIRIRNFEAVLAARALENVTKSDVK
Ga0127481_111031763300010101Grasslands SoilMTVIFEKAAIKIEKAQEYAKLQAAIEQAFLPDKAEQFLKQLDRKAIRIRNVDEVLAQKVLERF
Ga0074044_1033170013300010343Bog Forest SoilMREGFEQAAIKIEKPQEFSKLQAAVEQAFLPERVERFLKQLDRKGIRVREFDSVLSVRALEDAVGATSTSDL
Ga0126378_1153186233300010361Tropical Forest SoilAPHVSRMAFEQAAIKVEKAEEFGELQAAVRQAFGSGKVERFLKQLDRKRIRIRDFDRVLESKAIEVAGG*
Ga0126381_10015107383300010376Tropical Forest SoilMAFEQAAIKVEKGEEFAKLQGAIAQAFAADKVERLLRQADRKGIRIRDFEAALKRRVFEGFGEPGLNAQQLYQSLVLSDQ
Ga0126344_116426933300010866Boreal Forest SoilMREGFEQAAIKIEKRQEFAKLQAAVEQAFLPEKVERFLKQLDRKGIRVREFDGVLAARLLEDVVGGTAAGSGLS
Ga0138582_112466313300011062Peatlands SoilMTVTFEQAAIKVEKAQEFARLQAAVEQAFLPDKVERFLKLLDRNGIRIRDFDGVLAQRMLEAVNGEPGLSARQLY
Ga0138595_109099913300011071Peatlands SoilMTVSFQQAAIKVEKAQEFARLQAAVEQAFLPEKVERFLKQLDRKGIRVRNFDAVLTQRLLEDAVGEAGLNARQLYESLPV
Ga0138568_109052613300011080Peatlands SoilMSFEQAAIKVEKPEEFAKLQAAVEQAFLPETVERFLKQLDRKGIRVREFDSVLSARALEDATGAASPTDLSA
Ga0138573_127992513300011089Peatlands SoilMTVSFQQAAIKVEKAQEFARLQAAVEQAFLPEKVERFLKQLDRKGIRVRNFDAVLTQRLLEDAVGEA
Ga0150983_1143486473300011120Forest SoilMVFEKAAIKIEKQQEFAKLQAAVEQAFLPEKVVRFLKQLDRKGIRVREFDGVLAARALEDPAGTAAA
Ga0150983_1582081913300011120Forest SoilMAFEQAAIKIEKLQEYGRLQAVIEQVFSAEKTERFLKQLDRKGIRIRDFDGVLLARALEDVAGGPKIGSTADSELS
Ga0137372_1081812913300012350Vadose Zone SoilMAFEQAAIKVEKAQEFARLQKAVEQAFLQDKLEKFLKQLDRKGIRVRDFDGVLAQRVL
Ga0157374_1212934113300013296Miscanthus RhizosphereMTVSFEQAAIKVEKAQEFARLQTAIEQAFLPDKVEQFLKQLDRKGIRVRNVDAVLAKKLLEQFGEPGLNAQL
Ga0181528_1039466113300014167BogMTVAFERAPIKIEKAQEFAALQKAVEHAFLPEQAEKFLKQLDRKGIRVRDFDAVLAQRVLEGFAEAGSDGAKLDAR
Ga0181516_1031363023300014655BogMTVTFERAPIKIEKEQDFATLQAAVEQAFLPEKAEGFLKQLDRKGIRVRDFDAVLAQRVLEGFGEAGLEARGLYASLPVSDQALRHKFKKLYQYY*
Ga0181507_105754313300016705PeatlandMGFEQATIKVQKEQEFAELRAAVEQAFLPEKAERFLKQLSRKAIRVRDFDGVLAARALGDAAGSQAGL
Ga0187825_1041164713300017930Freshwater SedimentMFEQAAIKVEKTEEFARLQSAVEHAFRPEKAEQFLKQLDRKGIRVRDFDAVLAQRVLEGFAEAGLNAQQLYG
Ga0187848_1011431013300017935PeatlandMGFEQAAIKVEKQKEFAKLQAAVEQAFLPEKVERFLKLLARKGIRVREFDGVLAARALEDAAGGSPAGSDLSAWQL
Ga0187819_1085770923300017943Freshwater SedimentVAFEQATIKVEKAQEFAALRAAIEQAFLAERVERFLKQLDRKGIRVRDFDAVLAQRVLEAFGEAGLNAK
Ga0187847_1023829563300017948PeatlandMTVAFERAPIKIEKAQEFAALQKAVEHAFLPEQAEKFLKQLDRKGIRVRDFDAVLAQRVLEGFAEAG
Ga0187781_1052846713300017972Tropical PeatlandMAFEQATIKVEKQQEFAKLQASVERVFLPEKVERFLKQLEGKGVRVREFDAVLAARALEGAMGGSAASSDLSAWQLYQALPL
Ga0187865_106597613300018004PeatlandMGFEQATIKVQKDEEFAKLQAAVGQAFLTAKAERFLKRLSRKGIRIRDFDGVLVARALEDAAGSQAGLSAWQLYQA
Ga0187804_1010502953300018006Freshwater SedimentMSGMTVVFEQAAIKIEQAHEFTSLQAAVEQAFSPDKVERFLKQLDRKGIRIRDFDAALAQRVLEAVGEPG
Ga0187882_137536913300018021PeatlandMGFEQAAIKVEKQQEFAKLQAAVEQAFLPEKVERFLKLLARKGIRVREFDGVLAARALED
Ga0184579_11126413300019174SoilMTVGFEQATIKIEKQQEFAKLQAAVEQAFLPEKTERFLKLLARKGIRVREFDGVLAARALEDVAGGSAKNS
Ga0184578_13270333300019180SoilMTVGFEQATIKIEKQQEFARLQTAVEQAFLPEKVERFLKLLNRKAIRVREFDKVLAARALEDAAGGSDVK
Ga0181506_136912063300019260PeatlandVTFERAPIKIEKEQDFATLQAAVEQAFLPEKAEGFLKQLDRKGIRVRDFDAVLAQRVLEGFGEAGLE
Ga0181512_119975933300019270PeatlandMTVAFERAPIKIEKAQEFAALQKAVEHAFLPEQAEKFLKQLDRKGIRVRDFDAVLAQRVLEGFAEAGSDGAKLDARGLYASLPV
Ga0193728_117327753300019890SoilLIQGSLRMTVIFQKAAIKIEKPEEFAKLQKAVEQAFLPERAEPFLKQLDRKGIRVRDFDGVLAQRLLETVVGEAELDGR
Ga0206356_1052111843300020070Corn, Switchgrass And Miscanthus RhizosphereMTVIFEKAAIKIEKAQEYAKLQGAIEQAFLPDKAEQFLKRLDRKGIRIRNVDAVLAQKVLERFGEPGLNA
Ga0210400_1103471113300021170SoilMAFEQAAIKIEKQQEFAKLQTAVEQAFSAGNVERFLKQLDRKAIRVREFDAVLSARALEEASGSAARP
Ga0210385_1157598913300021402SoilMTFEKAEIKVQKTEEFAKLQAPVEQAFLPEKVERFLKQLDGKGIRVRDFDAVLVQRVLEGFADPGLNAKQVYDSLPVSDQALMR
Ga0210383_1039659013300021407SoilMGFEQATIKIEKPQEFAKLQAAVEQAFQPEKLERFLKQMDRKGIRVREFDAVLSARLLEEVTGGSKVESGASPELSSWQLYQALPLSAEVQM
Ga0210402_1031880913300021478SoilMIQARSSQGMTVAFEQATIKVEKVEEFGKLQAAVVQAFLPGKAERFLKQLDRKGIRVRDFDAVL
Ga0210410_1158453133300021479SoilMKVGFEQAAIKVQKEAEFRKLHAAIEQAFLPEKAERFLKHLSGKGIRVREFDEVLAARAL
Ga0210409_1066665953300021559SoilMTATFQRAPIKIEKEQEFGRLQAAVEQAFLPEKAAGFLKQMDRKGIRIRDFDAVLAQRVLEGF
Ga0242647_101879113300022505SoilMAFEQATIKVEKQQEFAKLQAAVDQAFLPEKVERFLKHLDRKGIRVREFDAVLSARVLEDAVGRSAPKSDLSAWQLYQALPLS
Ga0222729_101270043300022507SoilLAFEQATIKVEKVEEFGKLQAAVEQAFLPGKAERFLKQLDRKGIRVRDFGGILAARLLEEAAGDSGLKAQQLYQGLPV
Ga0222728_100959013300022508SoilMTVIFQKAAIKIEKPEEFAKLQKAVEQAFLPERAEQFLKQLDRKGIRVRDFDGVLAQGLLETGAGEAELDG
Ga0222728_102998013300022508SoilMAFEQATIKVEKQQEFAKLQAAVEQAFLPERVERFLKQLDRKGIRVREFDAVLSARTLESVVAGSAARSDLSAWQLYQ
Ga0242676_100269113300022512SoilMGVTVTFQRAPIKVEKQQEYARLQAAVEQAFLPEKAAGFLKLMDRKGIRIRDFDALLAQRILEGVVGEAGLGAHQLYGALTVSDQGQMR
Ga0242667_104025413300022513SoilMGFEQATIKVEKQQEFAKLQVAVEQAFLPKTAERFLKLLDRKGIRVRDFDAVLSARSLEDAGGAAVKTDLSAWQLYQAL
Ga0242659_106992333300022522SoilMTATFERAPIKIEKEQEFARLQAAVQQAFLPEKAERFLKQLDRKGIRVRDFDGVLAQRILEGFAEAGLDARSLYESLPVSDQAQM
Ga0242655_1020643213300022532SoilMAFEQAAIKIEKLQEYGRLQAVIEQVFSAEKTERFLKQLDRKGIRIRDFDGVLLARALEDVAGGPKIGSTADSELSAWQLYQALPLS
Ga0242666_106712543300022721SoilMTVSFERVPIKVENEQEFARLKGAVEQAFLPEKVEQFLKQLDRRGIRVRDFDAVLTQRLLEGVVGE
Ga0228597_10299143300023012Plant LitterMTVGFEQATIKIEKQQEFAKLQAAVEQAFLPEKTERFLKLLARKGIRVREFDGVLAARALEDVAGGSAKNSDLSAWQLYQALPVS
Ga0247538_10193353300023678SoilMTATFERAPIKIEKEQEFARLQAAVEQAFLPEKAGRFLKQLDRKGIRVRDFDGVLAKRVLEGFAEAGL
Ga0208035_100109683300025406PeatlandMTVAFEQAAIKIEKAEEFARLRGAIEQAFLPEKVERFLKQLDRKGIRVREFDALLAARVLEESQAGSAKGSELSAWQLYQALTVSDQAQ
Ga0208035_101660113300025406PeatlandMREGFEQATIKIEKQQEFARLQAAVEQAFLPEKVERFLKQMDRKGIRVREFDAVLSARLLEGAGSGAADS
Ga0208935_100125073300025414PeatlandMTVTFERAPIKIEKEQEFARLQAAVEQAFLPEKAGRFLKQLDRKGIRVRDFDGVLAQRVL
Ga0208240_103463223300027030Forest SoilVGFEQATIKIEKQQEFAKLQAAVDQAFLREKAERFLKQLDRKGIRVRDFDSVLSARVLEEVA
Ga0209579_1034071213300027869Surface SoilVAFEQAAIKVEKAQEFAKLQAAVEQAFLLEKAEQFLKQLDRKGIRVRDFDAVLAKRVLEAFGE
Ga0302152_1007603023300028572BogMGFEQATIKVQKEAEFAKLQGAVEQAFLPDKTERFLKQLERQGVRVRDFDGVLAARALEDVAG
Ga0302227_1013575213300028795PalsaMREGFEQATIKIEKKQEFAKLQAAVEQAFLPEKAERFLKQMDRKGIRVREFDSVLSARLLEGAGSGAAADSGLSAWHLYQELPL
Ga0302230_1035645813300028871PalsaMREGFEQATIKIEKKQEFAKLQAAVEQAFLPEKAERFLKQMDRKGIRVREFDSVLSARLLEGAGSGAAADSGL
Ga0302230_1038585733300028871PalsaMGFEQATIKIEKEEEFAKLKAAVEQAFLPAKAERFLKRLDRKGIRVREFDGVLAARALEDAGGSPPQAGLSAWQLYQALPVSDQAQM
Ga0302229_1005939513300028879PalsaMAFEQATIKVQKEAEFAKLQAAVDQAFLPEKTERFLKQLEHKNVRVRDFDGVLTARALEDAV
Ga0311368_10015457113300029882PalsaMGFEQATIKIEKEEEFAKLKAAVEQAFLPAKAERFLKRLDRKGIRVREFDGVLAARALEDAGGSPPQAGLS
Ga0311341_1034718613300029908BogMTFEQATIKIEKQQEYGKLQNVIEQVFSPEKTERFLKQLDRKDVRIRDFDGVLAARALEDVAGASRLESAADSKLSAW
Ga0311369_1029533013300029910PalsaMMAFEQAAIKIEKQQEFAKLQAAVEQAFLSEKVERFLKQLDRKGIRVREFDAVLSTRLL
Ga0311359_1030066843300029914BogMGFEQATIKVQKEAEFAKLQGAVEQAFLPDKTERFLKQLERQGVRVRDFDGVLAARALEDVAGSKAELNASELYQALPVSDQAQM
Ga0311343_1035053663300029953BogMGFEQTAIKVEKQQEFAKLQAAVEHAFLPEKVERFLKLLARKGIRVREFDGVLAARALEDAVGGSPGASDLSAWQL
Ga0302277_134050633300029982BogMREGFEQATIKIEKPQEFAKLQAAVEQAFLPEKVERFLKQLDRKGIRVREFDAVLSARLLEGA
Ga0311339_1070397913300029999PalsaMAGKSLTLSLMVFEKAAIKIEKQQEFAKLQAAVEQAFLPEKVVRFLKQLDRKGIRVREFDGVLAARALEDPA
Ga0302306_1010520563300030043PalsaMREGFEQATIKIEKKQEFAKLQAAVEQAFLPEKAERFLKQMDRKGIRVREFDSVLSARLLEG
Ga0302281_1023347443300030044FenMGFEQTAIKVEKQQEFAKLQAAVEHAFLPEKVERFLKLLARKGIRVREFDGVLAARAL
Ga0302195_1027132133300030051BogMTFEQATIKIEKQQEYGKLQNVIEQVFSPEKTERFLKQLDRKDVRIRDFDGVLAARALEDVAGASRLESAADSKLSAWQLYQALP
Ga0302275_1021401453300030518BogMTFEQATIKIEKQQEYGKLQNVIEQVFSPEKTERFLKQLDRKDVRIRDFDGVLAARALEDVAGASRLESAADSKLSAWQLYQA
Ga0210287_117644843300030598SoilMELTLAFEQATIKVEKVEEFGKLQAAVEQAFLPDTVERFLKRLDRKGIRVRELDSVLSARVLEDAVGAASRSDLSAW
Ga0307482_102690863300030730Hardwood Forest SoilMAFEQAAIKVEKAREFGQLQGAVEQAFMPERVERFLKLLDRKGIRIRDFDGVLTQRVLEGFAGTELNARSLYDALTV
Ga0265761_10196813300030889SoilLAFEQATIKVEKVEEFGKLQAAVEQAFLPAKAERFLKQLDRKGIRVRDFEGILAARLLEDAAGDSGLKAQ
Ga0138302_104851873300030937SoilLRMTVTFQRAPIKIEKEQEYAQLQAAVEQAFLNEKVGQFLKQLDRKGIRVRDFAAVLAERLLEGVNKVTSNRLNKRK
Ga0265768_11156633300030963SoilMELTLAFEQATIKVEKVEEFGKLQAAVEQAFLPGKAERFLKQLDRKGIRVRDFEGILAARLLENA
Ga0099845_159139513300030975Boreal Forest SoilLSGAMRSFEQAAIKVEKAQEFAKLQAAVEQAFLPENAERFLKQLDRKGIRVRNFDAILAQKVLEGMVADAGLNAKE
Ga0265773_103079943300031018SoilLAFEQATIKVEKVEEFGKLQAAVEQAFLPEKAERFLKQLDRKGIRVRDFEGILAARLLENAAGDSGLAG
Ga0265340_1034691243300031247RhizosphereMTVIFQKASIKIEKPEEFAKLQKAVEQAFLPERAEQFLKQLDRKGIRVRDFDGVLAQRLLETVVGEAGLDGRKLYE
Ga0170820_1019408513300031446Forest SoilMTVSFRQAAIKVEKAQEFARLQKAVEQAFLQDKVGNFLKQLDRKGIRVRDFDAILAQKVLERVVAEAGLDARPLYESLPV
Ga0318528_1068692233300031561SoilMAFEQAAIKVEKAEEYARLQAVIELAFMPDKVERFLKQLDRKGIPVRDVDAILKQRVLDGDT
Ga0310686_11179909913300031708SoilMTVGFEQTAIKIEKQQEYAKLQAAVEQAFQLDRVGRFLKQLDRRGIRIRAFDEVLAARVLED
Ga0310686_11613757013300031708SoilMGFEQATIKVEKQQEFAKLQAAVEQAFLPEKLERFLKQLDRKGIRVRDFDAVLSTRALEDASASTVKADLSAWQLYQ
Ga0307476_1131254513300031715Hardwood Forest SoilMTVAFEQAAIKIEKAPEFARLQAAVEQAFLPEKAEQFLKQLDRKGIRVRDVDAVLAQRVLEGFGEPGLNAQQ
Ga0307474_1030963413300031718Hardwood Forest SoilVGFEQAAIKVQKEAEFRKLQAAIEQAFLPEKAERFLKHLSGKGIRVREFDEVLAARALEDAV
Ga0307477_1047221753300031753Hardwood Forest SoilMRVAFEQAAIEIKKPQEFAKLQAAVEQAFLPEKVGRFLKQLDRKGVRVREFESVLSARALEEGGSA
Ga0307478_1168856413300031823Hardwood Forest SoilMTVGFEQAAIKIEKQQEYAKLQAAVEQAFQLDRVERFLKQLDRRGIRIRAFDEVLSARILEDVAGGS
Ga0308175_10083442313300031938SoilMTVGFEQAAIKVERTQEFARLQAAIEQAFLPDKVEQLLKQLDRKGIRIRNVDAVLAQKVLERFGEPGLNPQQLY
Ga0316035_10158913300031955SoilMGFEQATIKIEKQAEFAKLQAAVEQAFLVEKVERFLKQLDRRGIRVREFDAVLSARVLEDAVGGPAAKSDLSAWQLYQALPLSDQAQMR
Ga0316051_103243823300032119SoilMAFEQATIKIEKQQEFAKLQAAVEQAFLPEKVERFLKQLDRKGIRVRDFDTVLSARMLENAAGGSAAKSDLSAWQLYQALPLS
Ga0316040_10112763300032121SoilLAFEQATIKVEKVEEFGKLQAAVEQAFLPGKAERFLKQLDRKGIRVRDFDGILAARLLEEAAGDSGLKAQLSYQGL
Ga0311301_1221243713300032160Peatlands SoilMTVSFEQATIKIEKQQEFAKLQAAVEQAFLSDKVERFLKQLDRKGIRVREFDSVLSARVLEDEVGGPAAKSDLSAWQLYQALPLSDQ
Ga0348332_1044170833300032515Plant LitterMGFEQATIKVEKQQEFAKLQAAVEQAFLPEKLERFLKQLDRKGIRVRDFDAVLSTRALEDASASTVKADLSAWQLYQALPLS
Ga0348332_1132720313300032515Plant LitterMAFEQATIKSEKQQEFAKLQAAVEQAFLPENVERFLKQLDRKGIRVREFDGVLSARLLEEVTGGSKA
Ga0335073_1109046923300033134SoilMAFEQASIKVQKEQEFARLQAALEQAFRLENVERFLKQLDRKGIRVRDFDAVLAKRVLESFGEAGLNAQHLYEALAIS
Ga0335077_1158102333300033158SoilMTVSFQQAAIKVEKAQEFARLQAAVEQAFLPEKVERFLKQMDRKGIRIRNFDGVLVERVL
Ga0310811_1011929613300033475SoilMAYEQAAIKVEKAQEFGTLQAAVEQAFLPNKVEDFLKQMDRRGIRVRDFDAILAKKILKSGGAQN
Ga0316212_102455943300033547RootsLAFEQATIKVEKVEEFGKLQAAVEQAFLPAKAERFLKQLDRKGIRVRDFEGILAARLLEDAAGDSGLKAQQ
Ga0370483_0275333_402_5783300034124Untreated Peat SoilMTVGFEQATIKIEKQEEFSRLQSAVEQAFVPEMAKQFMKQLERDRVRVRDFDGVLAKRT
Ga0370515_0325708_2_2263300034163Untreated Peat SoilMAFEQATIKVQKEAEFAKLQAAVDQAFLPEKTERFLKQLEHKNVRVRDFDGVLTARALEDAVGPQADLGARQLYQ
Ga0370515_0360807_2_2473300034163Untreated Peat SoilMREGFEQATIKIEKQQEFAKLQAAVEQAFLPEKVERFLKQMDRKGIRVREFDAVLSARLLEGAGSGAAADSGLSAWQLYQEL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.