Metagenome / Metatranscriptome Family F066003

Basic Information
Family ID	F066003
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	46 residues
Representative Sequence	LPANNSLVAKDDRFLRVVGIVLDAQPRFNALDDLADMMERLSKELAL
Number of Associated Samples	116
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.02 %
% of genes near scaffold ends (potentially truncated)	37.01 %
% of genes from short scaffolds (< 2000 bps)	88.98 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (78.740 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.984 % of family members)
Environment Ontology (ENVO)	Unclassified (33.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.882 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF08240	ADH_N	45.67
PF02627	CMD	30.71
PF01243	Putative_PNPOx	5.51
PF01488	Shikimate_DH	2.36
PF01494	FAD_binding_3	2.36
PF16884	ADH_N_2	2.36
PF08501	Shikimate_dh_N	1.57
PF00330	Aconitase	0.79
PF13602	ADH_zinc_N_2	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	30.71
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	30.71
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	4.72
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.36
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.36
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.36
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	1.57

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.31 %
Unclassified	root	N/A	19.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.74 %
Unclassified	root	N/A	19.69 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.97 %
Unclassified	root	N/A	19.69 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.57 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.07 %
Unclassified	root	N/A	19.69 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24.41 %
Unclassified	root	N/A	19.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.51 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	13.39 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.51 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	12.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.51 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	11.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.51 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.69 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	11.81 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.51 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig63008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	774	Open in IMG/M
2209111022\|2221219016	Not Available	685	Open in IMG/M
3300002239\|JGI24034J26672_10079939	Not Available	596	Open in IMG/M
3300002568\|C688J35102_118053722	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300002568\|C688J35102_118992564	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300004643\|Ga0062591_102836006	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300005105\|Ga0066812_1005917	Not Available	765	Open in IMG/M
3300005147\|Ga0066821_1022920	Not Available	538	Open in IMG/M
3300005164\|Ga0066815_10010781	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300005165\|Ga0066869_10008825	Not Available	1333	Open in IMG/M
3300005165\|Ga0066869_10099339	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005329\|Ga0070683_100271866	All Organisms → cellular organisms → Bacteria → Proteobacteria	1612	Open in IMG/M
3300005343\|Ga0070687_100088609	All Organisms → cellular organisms → Bacteria → Proteobacteria	1706	Open in IMG/M
3300005345\|Ga0070692_10582312	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005356\|Ga0070674_101811797	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005364\|Ga0070673_100362504	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300005440\|Ga0070705_100340978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300005445\|Ga0070708_101171561	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300005455\|Ga0070663_100111826	All Organisms → cellular organisms → Bacteria → Proteobacteria	2053	Open in IMG/M
3300005456\|Ga0070678_100304451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300005457\|Ga0070662_100172006	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300005468\|Ga0070707_100739435	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300005543\|Ga0070672_100349339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300005547\|Ga0070693_100865904	Not Available	675	Open in IMG/M
3300005577\|Ga0068857_100710990	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300005615\|Ga0070702_100356912	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300005718\|Ga0068866_10283411	Not Available	1027	Open in IMG/M
3300005842\|Ga0068858_102524962	Not Available	507	Open in IMG/M
3300006028\|Ga0070717_10421550	All Organisms → cellular organisms → Bacteria → Proteobacteria	1200	Open in IMG/M
3300006048\|Ga0075363_100083643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1749	Open in IMG/M
3300006175\|Ga0070712_101138150	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300006572\|Ga0074051_11712971	All Organisms → cellular organisms → Bacteria → Proteobacteria	1178	Open in IMG/M
3300006574\|Ga0074056_11737480	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300006576\|Ga0074047_12022458	Not Available	998	Open in IMG/M
3300009094\|Ga0111539_10910610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1023	Open in IMG/M
3300009148\|Ga0105243_10204031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300009551\|Ga0105238_11493349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	704	Open in IMG/M
3300010371\|Ga0134125_11089249	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300010373\|Ga0134128_10497429	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300010397\|Ga0134124_10394166	Not Available	1315	Open in IMG/M
3300010401\|Ga0134121_10137151	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300012203\|Ga0137399_11739966	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300012212\|Ga0150985_114964388	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012232\|Ga0137435_1149537	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012469\|Ga0150984_100137394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1594	Open in IMG/M
3300012924\|Ga0137413_10539644	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012937\|Ga0162653_100033133	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012939\|Ga0162650_100004319	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300012951\|Ga0164300_10189442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300012960\|Ga0164301_10849125	Not Available	703	Open in IMG/M
3300012961\|Ga0164302_10407628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	930	Open in IMG/M
3300012987\|Ga0164307_10142155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1568	Open in IMG/M
3300013296\|Ga0157374_10210648	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300013297\|Ga0157378_10683028	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300013297\|Ga0157378_11246694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300013306\|Ga0163162_11139793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	884	Open in IMG/M
3300015372\|Ga0132256_102272684	Not Available	646	Open in IMG/M
3300015373\|Ga0132257_100948110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1081	Open in IMG/M
3300015374\|Ga0132255_101390735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1060	Open in IMG/M
3300015374\|Ga0132255_103084295	Not Available	711	Open in IMG/M
3300017792\|Ga0163161_10240905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1407	Open in IMG/M
3300017965\|Ga0190266_10095951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1204	Open in IMG/M
3300017965\|Ga0190266_10144316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1059	Open in IMG/M
3300017997\|Ga0184610_1269548	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300018000\|Ga0184604_10027328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1417	Open in IMG/M
3300018027\|Ga0184605_10077011	Not Available	1450	Open in IMG/M
3300018028\|Ga0184608_10011164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3067	Open in IMG/M
3300018031\|Ga0184634_10417225	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300018054\|Ga0184621_10062943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1263	Open in IMG/M
3300018061\|Ga0184619_10010413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3643	Open in IMG/M
3300018066\|Ga0184617_1089311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	847	Open in IMG/M
3300018071\|Ga0184618_10461486	Not Available	534	Open in IMG/M
3300018072\|Ga0184635_10095070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1176	Open in IMG/M
3300018074\|Ga0184640_10065550	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300018076\|Ga0184609_10029497	All Organisms → cellular organisms → Bacteria → Proteobacteria	2243	Open in IMG/M
3300018076\|Ga0184609_10332138	Not Available	710	Open in IMG/M
3300018081\|Ga0184625_10551064	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300018429\|Ga0190272_11346200	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300018465\|Ga0190269_10296499	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300018466\|Ga0190268_10226450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1049	Open in IMG/M
3300018469\|Ga0190270_10160896	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300018469\|Ga0190270_11295775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	771	Open in IMG/M
3300018481\|Ga0190271_11044071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	941	Open in IMG/M
3300019269\|Ga0184644_1006170	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300019873\|Ga0193700_1050742	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300019887\|Ga0193729_1111708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1028	Open in IMG/M
3300020002\|Ga0193730_1160884	Not Available	585	Open in IMG/M
3300021082\|Ga0210380_10018829	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300025898\|Ga0207692_10479052	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300025899\|Ga0207642_10857261	Not Available	580	Open in IMG/M
3300025900\|Ga0207710_10008476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4334	Open in IMG/M
3300025901\|Ga0207688_10007542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5919	Open in IMG/M
3300025904\|Ga0207647_10022482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4187	Open in IMG/M
3300025926\|Ga0207659_10308507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1302	Open in IMG/M
3300025927\|Ga0207687_10082681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2324	Open in IMG/M
3300025940\|Ga0207691_10044727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4074	Open in IMG/M
3300026041\|Ga0207639_10178075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1806	Open in IMG/M
3300026075\|Ga0207708_11198553	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300026359\|Ga0257163_1083131	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026555\|Ga0179593_1076748	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300027288\|Ga0208525_1011383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	978	Open in IMG/M
3300028381\|Ga0268264_10266506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1598	Open in IMG/M
3300028712\|Ga0307285_10003961	All Organisms → cellular organisms → Bacteria	2938	Open in IMG/M
3300028714\|Ga0307309_10069894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	796	Open in IMG/M
3300028720\|Ga0307317_10232720	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300028722\|Ga0307319_10201400	Not Available	651	Open in IMG/M
3300028754\|Ga0307297_10342468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300028755\|Ga0307316_10134383	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300028768\|Ga0307280_10138364	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300028768\|Ga0307280_10297395	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028771\|Ga0307320_10342401	Not Available	596	Open in IMG/M
3300028784\|Ga0307282_10670470	Not Available	502	Open in IMG/M
3300028787\|Ga0307323_10078724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1175	Open in IMG/M
3300028790\|Ga0307283_10146475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	649	Open in IMG/M
3300028796\|Ga0307287_10038209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1733	Open in IMG/M
3300028878\|Ga0307278_10083940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1434	Open in IMG/M
3300028878\|Ga0307278_10424429	Not Available	583	Open in IMG/M
3300031170\|Ga0307498_10000529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5002	Open in IMG/M
3300031170\|Ga0307498_10434285	Not Available	523	Open in IMG/M
3300031226\|Ga0307497_10270476	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	767	Open in IMG/M
3300031720\|Ga0307469_10432694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1134	Open in IMG/M
3300031820\|Ga0307473_11251039	All Organisms → cellular organisms → Bacteria → Proteobacteria	554	Open in IMG/M
3300031908\|Ga0310900_10341153	Not Available	1117	Open in IMG/M
3300031908\|Ga0310900_11548744	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300032003\|Ga0310897_10231273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	820	Open in IMG/M
3300032205\|Ga0307472_101461363	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	666	Open in IMG/M
3300034151\|Ga0364935_0067088	Not Available	1067	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.44%
Host-Associated	Host-Associated	26.77%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.06%
Plants	Host-Associated → Plants	26.77%
Aquatic	Environmental → Aquatic	13.39%
Modeled	Engineered → Modeled	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.60%
Sediment	Environmental → Aquatic → Sediment	11.81%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.57%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.81%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.15%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.57%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.09%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.15%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0008.00004540	2166559005	Simulated	LPANNSLVAKDDRFLRVVGIVLDAQPRFNALDDLAEIIERPSKELAL
2222065631	2209111022	Grass Soil	DDRFLRVVGIVLDAQPRFNALDDLADMMERPSKELAL
JGI24034J26672_100799392	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	RALIFRSFPLPANNSLIVDDXRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
C688J35102_1180537221	3300002568	Soil	LPANNSLIVDDGRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
C688J35102_1189925642	3300002568	Soil	LPANNNLVVVDDPFLRVVGIVLDAQPCLNALDGVAGLIEQLSKELAL*
Ga0062591_1028360062	3300004643	Soil	LPANNSLVVVDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSKEPAL*
Ga0066812_10059172	3300005105	Soil	LPANNSLIVDDDRLLRVVGTEPDPQPRLNALDELADMTERLSRELAL*
Ga0066821_10229202	3300005147	Soil	LIVDDDRLLRVVGTEPDPQPRFNTLDDLADMTERLSREPAL*
Ga0066815_100107812	3300005164	Soil	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL*
Ga0066869_100088251	3300005165	Soil	LPASNSLVAKDDRFPPVAGTVFDPQPCFRVLDGVAGLIERLSKEPAP*
Ga0066869_100993391	3300005165	Soil	LPADNGLVAKDDRFLRVAGIVLDAQHRFNALHDLAGMIEQPSKELAS*
Ga0070683_1002718662	3300005329	Corn Rhizosphere	LPASNSLVAKDDRFPPVAGTVFDPQPCFKVLDGVAGLIERLSKEPAP*
Ga0070687_1000886093	3300005343	Switchgrass Rhizosphere	LPANNSLIIDDDRFLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0070692_105823121	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSRE
Ga0070674_1018117972	3300005356	Miscanthus Rhizosphere	HALIFRSFPLPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL*
Ga0070673_1003625041	3300005364	Switchgrass Rhizosphere	LPANNSLVVVDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSKEPA
Ga0070705_1003409783	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIIDDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSKEPAL*
Ga0070708_1011715612	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIIDDDRFLRVVGTEPDPQPRFNALDDLADMTERLSREPAL*
Ga0070663_1001118262	3300005455	Corn Rhizosphere	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0070678_1003044512	3300005456	Miscanthus Rhizosphere	LPANNSLIVDDGRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL*
Ga0070662_1001720061	3300005457	Corn Rhizosphere	HALIFRSFPLPANNSLIVDDGRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0070707_1007394352	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIFRSFPLPANNSLIIDDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSKEPAL*
Ga0070672_1003493392	3300005543	Miscanthus Rhizosphere	VIFRSFPLPANNSLIIDDDRFLRVVGTEPDPQPRFNALDDLADMTERLSREPAL*
Ga0070693_1008659041	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	IFRSFPLPANNSLIIDDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSKEPAL*
Ga0068857_1007109902	3300005577	Corn Rhizosphere	LPANNSLVVVDDRFLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0070702_1003569122	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIVDDGRLLRVVGTEPDPQPRFNALDDLADMTERLSREPAL*
Ga0068866_102834112	3300005718	Miscanthus Rhizosphere	RLLRVVGTEPDPQPRFNALDELADMTERLSREPAL*
Ga0068858_1025249622	3300005842	Switchgrass Rhizosphere	HALIFRSFPLPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0070717_104215502	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIVDDGHFLRMVGVLDPQPCLNGLDGVAGLIEQLSKELAL*
Ga0075363_1000836434	3300006048	Populus Endosphere	LPANNSLVVVDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSK
Ga0070712_1011381502	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIIDDDRLLRVVGTEPDPQPRFNALDDLADMTERLSREPA
Ga0074051_117129712	3300006572	Soil	LPANNSLVAKDDRFPPVAGTVFDPQPCFKVLDGVAGLIERLSKEPAP*
Ga0074056_117374803	3300006574	Soil	LPADNGLVAKDDRFLRVAGIVLDAQPRFNALHDLAGMMERPSKELAL*
Ga0074047_120224582	3300006576	Soil	VDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL*
Ga0111539_109106102	3300009094	Populus Rhizosphere	VIFRSFPLPANNSLIVDDGRLLRVVGTEPDPQLCFNSLDLAGLMERSSKELAL*
Ga0105243_102040312	3300009148	Miscanthus Rhizosphere	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDDLADMTERLSREPAL*
Ga0105238_114933491	3300009551	Corn Rhizosphere	GRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0134125_110892492	3300010371	Terrestrial Soil	LPANNSLAVVDDRYLRVVGVVLDPQPCFKALDGVAGLIERLSKELAS*
Ga0134128_104974292	3300010373	Terrestrial Soil	LPANNSLVVVDDRFLRVVGTVLDSQPCFNALDDLAGLIERQSKEPAL*
Ga0134124_103941663	3300010397	Terrestrial Soil	LPANNSLVVVVDRFLRVVGTVIDPQPCFNALDGVAGLIERLPKGPAS*
Ga0134121_101371512	3300010401	Terrestrial Soil	LPANNSLAVVDDRSLRVVGIVLDPQPCFKALDGVAGLIERLSKELGS*
Ga0137399_117399662	3300012203	Vadose Zone Soil	LPANNSLVAKDDRFLRVVGIVLDAQPRFNALDDLADMMERPSKELAL*
Ga0150985_1149643882	3300012212	Avena Fatua Rhizosphere	LPANNNLVVVVDPFLRVVGIVLDAQPCLNALDGVAGLIEQLSKELAL*
Ga0137435_11495372	3300012232	Soil	LPADNGLVAKDDRFLRVVGIVLDAQPRFNALHDLADMMERLSKELAL
Ga0150984_1001373943	3300012469	Avena Fatua Rhizosphere	LPANNSLIVDDDRFLRVVGTVIDPQPCFNALDGVAGLIEQLSKELAL*
Ga0137413_105396442	3300012924	Vadose Zone Soil	LPANNSLVAKDDRFLRVVGMVLDAQPRFNALHDLADMPSKELAL*
Ga0162653_1000331331	3300012937	Soil	LLANNSLVVVDDRFLRVIGSVLDPQLQFDGRDDLAGLIERLSK
Ga0162650_1000043191	3300012939	Soil	RRPRLDFRSFPLPASNSLVAKDRFPRVAGAVLDPQPRFSPLDDLAGLIEQMSKEPAL*
Ga0164300_101894422	3300012951	Soil	LPANNSLIVDDGRLLRVVGTEPDPQPRFNALAELADTTERLSRELAL*
Ga0164301_108491251	3300012960	Soil	ANNSLIVDDGRLLRVVGTEPDPQPRFNTLDDLADMTERLSREPAL*
Ga0164302_104076283	3300012961	Soil	VIFRSFPLPANNSLIVDDGRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0164307_101421553	3300012987	Soil	LPANNSLIVDDDRFLRVVGTVLDPQPRFNALDELADMTERLSREPAL*
Ga0157374_102106481	3300013296	Miscanthus Rhizosphere	RLLRVVGTEPDPQPRFNALDELADMTERLSRELAL*
Ga0157378_106830283	3300013297	Miscanthus Rhizosphere	LPANQSLVVGDDRLLRVVGTEPDPQPRFNALDELADMTERLSMELAL*
Ga0157378_112466942	3300013297	Miscanthus Rhizosphere	VIFRSFPLPANNSLIIDDDRFLRVVGTEPDPQPRFNALDELADMTERLSREPAL*
Ga0163162_111397932	3300013306	Switchgrass Rhizosphere	LPANNNLVVVDDPFLRVVGIVLDAQPCRNALDGVAGLIEQLSKELAL*
Ga0132256_1022726841	3300015372	Arabidopsis Rhizosphere	NNSLAVVDDRSLRVVGIVLDPQPCFKALDGVAGLIERLSKELGS*
Ga0132257_1009481102	3300015373	Arabidopsis Rhizosphere	LPANNSLAVVDDRSLRVVGIVLDPQPCFKALDGVAGLIERLSKELAS*
Ga0132255_1013907352	3300015374	Arabidopsis Rhizosphere	LPANNSLAVVDDHFLRVVGIVLDPQPGFKALDGVAGLIERLSKELAS*
Ga0132255_1030842952	3300015374	Arabidopsis Rhizosphere	LPANNGLVAKDDRFLHVVGVVLDAQPRFNALDDLAGMPSKELAF*
Ga0163161_102409052	3300017792	Switchgrass Rhizosphere	LPANNSLVVVDDRFLRVVGTVLDLQPCFNAIDDLADMTEQLSKEPAL
Ga0190266_100959513	3300017965	Soil	LPANNNLVVVDDPFLRVVGIVLDAQPCLNALDGVAGLIEQLSKELAL
Ga0190266_101443162	3300017965	Soil	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL
Ga0184610_12695482	3300017997	Groundwater Sediment	LPANNSLVAKDDRFLRVVGVVLDAQPRFNALHDLADMMERLS
Ga0184604_100273283	3300018000	Groundwater Sediment	LPANNSLVAKDDRFLRVVGIVLDALPRFNALHDLADMMERPSKELAL
Ga0184605_100770113	3300018027	Groundwater Sediment	LPANNSLVAKDDRFLRVVGVVLDAQPRFNALHDLADMMERLSKELAL
Ga0184608_100111644	3300018028	Groundwater Sediment	LPANNSLVAKDDRFLRAVGIVLDAQPRFNALDDLADMMERPSKELAL
Ga0184634_104172252	3300018031	Groundwater Sediment	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADRTERLSREPAL
Ga0184621_100629432	3300018054	Groundwater Sediment	LPANNSLVAKDDRFLRVVGIVLDAQPRFNALDDLADMMERPSKELAL
Ga0184619_100104134	3300018061	Groundwater Sediment	LPANNSLVAKDVAGIVLDARPRFNALDDLAGMPSKEVAL
Ga0184617_10893111	3300018066	Groundwater Sediment	AGHALIFRSFPLPANNSLVAKDDRFLRVVGVVLDAQPRFNALDDLAGMPSKEVAL
Ga0184618_104614861	3300018071	Groundwater Sediment	ALIFRSVPLPANNSLVAKDDRFLRVVGIVLDALPRFNALHDLADMMERPSKELAL
Ga0184635_100950702	3300018072	Groundwater Sediment	LPTNNGLVAKDDRFLRVVGIVLDAQPRFNALHDLADMMERLSKELAL
Ga0184640_100655501	3300018074	Groundwater Sediment	NNSLVAKDDRFLRLVGIVLDAQPRFNALDDLADMMERPSKELAL
Ga0184609_100294971	3300018076	Groundwater Sediment	LPANNSLVAKDDRFLRVVGVVLDAQPRFNALHDLADMMERL
Ga0184609_103321381	3300018076	Groundwater Sediment	PANNSLVSKDVAGIVLDARPRFNALDDLAGMPSKEVAL
Ga0184625_105510642	3300018081	Groundwater Sediment	LLANNSLVAKDDRFLRLVGIVLDAQPRFNALDDLADMMERPSKERAL
Ga0190272_113462002	3300018429	Soil	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSR
Ga0190269_102964993	3300018465	Soil	LPTNNSLVVVVDRLLRVVGTVLDPQLCFNSLDLAGLIE
Ga0190268_102264503	3300018466	Soil	LPANNSLVVVDDRLLRVIGTVLDPQLQFDERDDLAGLI
Ga0190270_101608963	3300018469	Soil	LPANNSLIVDDDRFLRVVGTVLDPQPRFNALEDLADMTERLSKELAL
Ga0190270_112957752	3300018469	Soil	LLANNSLVVVDDRFLRVIGSVLDPQLQFDGRDDLAGLIERLSKELAS
Ga0190271_110440713	3300018481	Soil	LPASNSLIVVDDRFLRVVGTVLDLQPRSNALDDLADMTERLS
Ga0184644_10061701	3300019269	Groundwater Sediment	KDDRFLRVVGIVLDALPRFNALHDLADMMERPSKELAL
Ga0193700_10507421	3300019873	Soil	LPANNSLVAKDDRFLRVVGIVLDAQPRFNALHDLADMMERLSKELAL
Ga0193729_11117082	3300019887	Soil	LPANNSLVAKDDRFLRVVGIVLDAQPRFNALDDLADMMERLSKELAL
Ga0193730_11608842	3300020002	Soil	LPANNNLVVDDDPFLRVVGIVLDAQPCLNALDGVAGLIEQLSKELAL
Ga0210380_100188291	3300021082	Groundwater Sediment	GHALIFRSFPLPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL
Ga0207692_104790521	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LPASNSLVAKDDRFPPVAGTVFDPQPCFKVLDGVAGLIERLSKEPAP
Ga0207642_108572611	3300025899	Miscanthus Rhizosphere	PANNSLIVDDGRLLRVVGTEPDPQPRFNALDDLADMTERLSREPAL
Ga0207710_100084765	3300025900	Switchgrass Rhizosphere	LPANNSLVVVDDRFLRVVGTVLDSQPCFNALDDLAGLIERLSKEPAL
Ga0207688_100075427	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIVDDGRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL
Ga0207647_100224825	3300025904	Corn Rhizosphere	PLPANNSLIIDDDRFLRVVGTEPDPQPRFNALDDLADMTERLSREPAL
Ga0207659_103085072	3300025926	Miscanthus Rhizosphere	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL
Ga0207687_100826813	3300025927	Miscanthus Rhizosphere	LPANNSLIVDDGRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL
Ga0207691_100447272	3300025940	Miscanthus Rhizosphere	LPANNSLIVDDDRLLRVVGTEPDPQPRFNALDDLADMTERLSREPAL
Ga0207639_101780751	3300026041	Corn Rhizosphere	VIFRSFPLPANNSLIIDDDRFLRVVGTEPDPQPRFNALDDLADMTE
Ga0207708_111985531	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LPANNSLIIDDDRFLRVVGTEPDPQPRFNALDDLADMTERLAKELAL
Ga0257163_10831312	3300026359	Soil	LPANNSLVAKDDRFLRMVGIVLDAQPRFNALDDLADIMERPSKELAL
Ga0179593_10767483	3300026555	Vadose Zone Soil	LPANNSLVAKDGPLPLRASASCSTRSPRFNALDDLADMMERPSKELAL
Ga0208525_10113832	3300027288	Soil	LPADNGLVAKDDRFLRVAGIVLDAQHRFNALHDLAGMIEQPSKELAS
Ga0268264_102665062	3300028381	Switchgrass Rhizosphere	VIFRSFPLPANNSLIIDDDRFLRVVGTEPDPQPRFNALDELADMTERLSRELAL
Ga0307285_100039614	3300028712	Soil	LPASNSLVAKDRFPRVAGAVLDPQPRFSPLDDLAGLIEQMSKEPAL
Ga0307309_100698942	3300028714	Soil	LPASNSLVAKDDRFPPVAGTVFDSQPCFKVLDGVAGLIERLSKEPAP
Ga0307317_102327202	3300028720	Soil	LPANNNLVVVDDPFLRVVGIVLDAQPCLNALDGVAGLIEQLSK
Ga0307319_102014001	3300028722	Soil	RFLRVVGIVLDAQPRFNALDDLADMMERLSKELAL
Ga0307297_103424682	3300028754	Soil	LPANNSLVAKDDRFLRVVGVVLDAQPRFNALHDLADMMKRPSKELAL
Ga0307316_101343832	3300028755	Soil	LPANNSLVAKDDRFLRVVGVVLDAQPRFNALDDLADMMERLSKELAL
Ga0307280_101383642	3300028768	Soil	LPANNSLVAKDDRFLRVVGVVLDAQPRFNARHDLADMMERLSKELAL
Ga0307280_102973951	3300028768	Soil	LPANNSLVVVDDRFLRGVGTVLDPLPCFKALDEHAGLIERLSKELML
Ga0307320_103424012	3300028771	Soil	NNSLVAKDDRFLRVVGVVLDAQPRFNALHDLADMMERLSKELAL
Ga0307282_106704702	3300028784	Soil	PLPANNSLVAKDDRFLRVVGVVLDAQPRFNALHDLADMMERLSKELAL
Ga0307323_100787241	3300028787	Soil	KDDRFLRVVGVVLDAQPRFNALHDLADMMERLSKELAL
Ga0307283_101464752	3300028790	Soil	LPANNSLVAKDDRFLRVVGIDAQPRFNALDDLADMMERPSKELAL
Ga0307287_100382092	3300028796	Soil	LPANNSLVAKDDRFLRVVGIVLDALPRFNALHDLADMMERLSKELAL
Ga0307278_100839403	3300028878	Soil	LPANNSLVAKDDCFLRVVGVVLDAQPRFNALHDLADMVERPSKELAL
Ga0307278_104244292	3300028878	Soil	FRSFPLPANNSLVAKDDRFLRLVGIVLDAQPRFNALDDLADMMERPSKELAL
Ga0307498_100005297	3300031170	Soil	LPADNGLVAKDDRFLRVAGIVLDAQLRFNALHDLAGMMERPSKELAL
Ga0307498_104342852	3300031170	Soil	LPADNGLVAKDDRFLHVAGIVLDAQPRFNALHDLAGMMERPSKELAL
Ga0307497_102704762	3300031226	Soil	LPADNGLVAKDDRFLRVAGIVLDAQPRFNALHDLAGMMERPSKELAL
Ga0307469_104326942	3300031720	Hardwood Forest Soil	LPANNSLIVDDDRFLRVVGTEPDPQPRFNALDELADMTERLSREPAL
Ga0307473_112510392	3300031820	Hardwood Forest Soil	LAANNSRVAKDDRFLRVLDAQPRFNALDDLASMPSKELAL
Ga0310900_103411531	3300031908	Soil	VVDDPFLRVVGIVLDAQPCLNALDGVAGLIEQLSKELAL
Ga0310900_115487442	3300031908	Soil	LPANNSLAVVDDRSLRVVGIVLDPQPCFKALDGVAGLIERLSKELAS
Ga0310897_102312731	3300032003	Soil	AGHALIFRSFPLPANNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL
Ga0307472_1014613631	3300032205	Hardwood Forest Soil	NNSLIVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSRELAL
Ga0364935_0067088_2_124	3300034151	Sediment	IVDDDRLLRVVGTEPDPQPRFNALDELADMTERLSREPAL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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