Metagenome / Metatranscriptome Family F065992

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065992
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	99 residues
Representative Sequence	HLAIGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQSHGSTCPAVNRLGCYELAFRVERVRG
Number of Associated Samples	116
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.21 %
% of genes from short scaffolds (< 2000 bps)	92.13 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.984 % of family members)
Environment Ontology (ENVO)	Unclassified (32.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.331 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.17% β-sheet: 19.05% Coil/Unstructured: 77.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00781	DAGK_cat	10.24
PF01048	PNP_UDP_1	3.94
PF00296	Bac_luciferase	2.36
PF06825	HSBP1	0.79
PF00999	Na_H_Exchanger	0.79
PF03734	YkuD	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	20.47
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	3.94
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	3.94
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	3.94
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.36
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.79
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.79
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.79
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.79
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	88.19 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	88.19 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	88.19 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0585312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300000891\|JGI10214J12806_10075847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300000955\|JGI1027J12803_102505379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300000956\|JGI10216J12902_105944237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300003911\|JGI25405J52794_10103243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300004114\|Ga0062593_102160034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300004157\|Ga0062590_102513785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300004479\|Ga0062595_101190794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300005164\|Ga0066815_10052364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300005294\|Ga0065705_10661591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300005329\|Ga0070683_102240244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005330\|Ga0070690_100685178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300005340\|Ga0070689_101153464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300005364\|Ga0070673_100986275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300005437\|Ga0070710_10303628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300005438\|Ga0070701_10392686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300005440\|Ga0070705_101592036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300005518\|Ga0070699_102043617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005546\|Ga0070696_100874123	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005563\|Ga0068855_101070996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300005563\|Ga0068855_101232764	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005586\|Ga0066691_10856196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300005840\|Ga0068870_10626318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300005840\|Ga0068870_10883689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300005889\|Ga0075290_1015650	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005893\|Ga0075278_1032265	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300006175\|Ga0070712_101993145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300006358\|Ga0068871_102237637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300006572\|Ga0074051_11139325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300006578\|Ga0074059_11097918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300006606\|Ga0074062_10053945	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300006800\|Ga0066660_10955895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300006806\|Ga0079220_10344048	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300006806\|Ga0079220_10438831	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300006871\|Ga0075434_101398202	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006881\|Ga0068865_101633606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300006914\|Ga0075436_100468919	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300009177\|Ga0105248_11471182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300009553\|Ga0105249_10067768	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300010039\|Ga0126309_10017925	All Organisms → cellular organisms → Bacteria	3049	Open in IMG/M
3300010039\|Ga0126309_10195206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300010041\|Ga0126312_11433069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300010042\|Ga0126314_10044413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2855	Open in IMG/M
3300010042\|Ga0126314_10131798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1728	Open in IMG/M
3300010044\|Ga0126310_10248236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1199	Open in IMG/M
3300010303\|Ga0134082_10270299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300010373\|Ga0134128_10237209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2048	Open in IMG/M
3300010399\|Ga0134127_12559239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300010401\|Ga0134121_10443615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300011107\|Ga0151490_1496836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300012211\|Ga0137377_10303092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1532	Open in IMG/M
3300012349\|Ga0137387_11011815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012350\|Ga0137372_10106907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2338	Open in IMG/M
3300012351\|Ga0137386_10529260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300012906\|Ga0157295_10352073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300012958\|Ga0164299_10578528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300012958\|Ga0164299_11051229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300012958\|Ga0164299_11152257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300012961\|Ga0164302_10396367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300012987\|Ga0164307_11142640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300012988\|Ga0164306_10181523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1462	Open in IMG/M
3300014497\|Ga0182008_10073260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1685	Open in IMG/M
3300014969\|Ga0157376_11898272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300015200\|Ga0173480_11270535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300015357\|Ga0134072_10086833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300015372\|Ga0132256_103825047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300018061\|Ga0184619_10226107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300018066\|Ga0184617_1163567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300019869\|Ga0193705_1097598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300019873\|Ga0193700_1043241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300019890\|Ga0193728_1042031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2245	Open in IMG/M
3300021080\|Ga0210382_10010252	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300021445\|Ga0182009_10344002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300022756\|Ga0222622_11025416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300022898\|Ga0247745_1050353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300024187\|Ga0247672_1017534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300024286\|Ga0247687_1003252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2000	Open in IMG/M
3300024287\|Ga0247690_1026726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300024323\|Ga0247666_1022018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1359	Open in IMG/M
3300024331\|Ga0247668_1069772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300025906\|Ga0207699_11144635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025917\|Ga0207660_10534259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300025926\|Ga0207659_10714705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300025931\|Ga0207644_10911530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300025933\|Ga0207706_10942202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300025949\|Ga0207667_10912208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300025960\|Ga0207651_10443092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1113	Open in IMG/M
3300026075\|Ga0207708_10796771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300026300\|Ga0209027_1092600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1094	Open in IMG/M
3300026552\|Ga0209577_10276058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1261	Open in IMG/M
3300027765\|Ga0209073_10154993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300027992\|Ga0247750_1041802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300028145\|Ga0247663_1030519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300028704\|Ga0307321_1069365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300028707\|Ga0307291_1088753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300028716\|Ga0307311_10100264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300028717\|Ga0307298_10211339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300028718\|Ga0307307_10148509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300028755\|Ga0307316_10072054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1182	Open in IMG/M
3300028755\|Ga0307316_10135771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300028768\|Ga0307280_10229628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300028784\|Ga0307282_10100364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1342	Open in IMG/M
3300028790\|Ga0307283_10052110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300028791\|Ga0307290_10192091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300028807\|Ga0307305_10070183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1616	Open in IMG/M
3300028807\|Ga0307305_10245002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300028811\|Ga0307292_10502231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300028812\|Ga0247825_10536671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300028814\|Ga0307302_10223630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300028819\|Ga0307296_10076903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1776	Open in IMG/M
3300028824\|Ga0307310_10330288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300028875\|Ga0307289_10253828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300028880\|Ga0307300_10081444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300028880\|Ga0307300_10143428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300028881\|Ga0307277_10555730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300028885\|Ga0307304_10248661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300031720\|Ga0307469_12211484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300031740\|Ga0307468_100502027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300031938\|Ga0308175_102114754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300031943\|Ga0310885_10275896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300031995\|Ga0307409_100060321	All Organisms → cellular organisms → Bacteria	2958	Open in IMG/M
3300031996\|Ga0308176_10854468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300032075\|Ga0310890_10077919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2004	Open in IMG/M
3300032180\|Ga0307471_104329442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300032205\|Ga0307472_100324715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300032205\|Ga0307472_101564481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300032892\|Ga0335081_10388696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1800	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.46%
Host-Associated	Host-Associated	16.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.31%
Plants	Host-Associated → Plants	16.54%
Aquatic	Environmental → Aquatic	3.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.51%
Sediment	Environmental → Aquatic → Sediment	2.36%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.50%
Loam	Environmental → Terrestrial → Soil → Loam	9.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05853122	2228664021	Soil	FRGGPTLDVQLARGRPWRVFVFARECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGIAVARFLSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
JGI10214J12806_100758472	3300000891	Soil	QVFRHGPTLDVRLARGRPWRVFVFTRECDFGSLGNADGATHAMSPCPRSSEFGTFDGDDVPGYAVAHFPSPAAALGLHVLRPQRQGSSCPAVNRLGCYEIAFRVERAGGV*
JGI1027J12803_1025053792	3300000955	Soil	LRLAPGRPWRVFVFTRECDFGLLGNADGPTHALVPCPTSKEFGTFDGDDVPGIAVVRFASPAASLGPHRLRPRRQGSTCPV
JGI10216J12902_1059442372	3300000956	Soil	WGKGLLRAHDGQVFRHGPVLDVLVPRGRPFRIFAFTRECDFGSFGNADRSSDAMTPCPLSREYGSFADGDDRPGIVVRRFSSPTAALGFHRGRPIKALSTCPAVNRLGCYELDYVVTRLRPR*
JGI25405J52794_101032432	3300003911	Tabebuia Heterophylla Rhizosphere	VFTRECDFGLLGNADGPGHALTPCPTSKEFGTFDGDDVPGIAVARFASPAASLGQHRLRPRRQGSTCPAVNRLGCYEVAFRVELVAV*
Ga0062593_1021600342	3300004114	Soil	FTRECDFGLLGNADGPTHALAPCPTSKEFGTFDGDDVPGIAVVRFASPAASLGPHRLRPRRQGSTCPVVNRLGCYEVAFRVERVGV*
Ga0062590_1025137852	3300004157	Soil	FTRECDFGLLGNADGPTHALAPCPTSKEFGTFDGDDVPGITVVRFASPAASLGPHRLRPRRQGSTCPVVNRLGCYEVAFRVERVGV*
Ga0062595_1011907941	3300004479	Soil	GPTLDVDVPRGRPWRVFAFARECDFGSFGNADGAGHAMTPCPRSNEYGSFADGDDRPGVIVRRFRSPAASLGFHRGRPLQALSTCPRVNRLGCYELDYVVTRVR*
Ga0066815_100523642	3300005164	Soil	PWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGISVAHFRSPAAALGLHRLRPERLGSTCPAVNLLGCYELELRVDRVQG*
Ga0065705_106615912	3300005294	Switchgrass Rhizosphere	GRPWRVFVFTRECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGFAVARFPSPAASLGLHRLRPQRLGSTCPPANRLGCYELSYRVDRVRG*
Ga0070683_1022402442	3300005329	Corn Rhizosphere	TRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPRRQGSTCPAVNRLGCYELAFRVERAGGV*
Ga0070690_1006851783	3300005330	Switchgrass Rhizosphere	DLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0070689_1011534641	3300005340	Switchgrass Rhizosphere	PTLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0070673_1009862753	3300005364	Switchgrass Rhizosphere	TRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0070710_103036281	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0070701_103926861	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	PWRVFVFTRECDFGSLGSADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPRRQGSTCPAVNRLGCYELAFRVERAGGV*
Ga0070705_1015920361	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DGQVFRNGPVLDVHVPRGRPWRVFAFARECDFGSFGNADGASHAMTPCPRSSEFGSFTDGDDRPGVIVKRFASPSAALGFHRGRPLRALSTCPPVNRRGCYELDYVVTRVR*
Ga0070699_1020436171	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LLRPHDGQVFRNGPTLDVYLARGRPWRVFAFARECDFGSLGNADGPTHAMTPCPRSTEFGSIADGDDRAGVIVDRFASPAASLGFHRGRPLRLLSTCPTVNKLGCYQLEYTVSRIPDESARRAAVR*
Ga0070696_1008741231	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	WRVFVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVPGRV*
Ga0068855_1010709961	3300005563	Corn Rhizosphere	RVFVFTRECDFGLLGNADGPTHALAPCPTSKEFGTFDGDDVPGITVVRFASPAASLGPHRLRPRRQGSTCPVVNRLGCYEVAFRVERVGV*
Ga0068855_1012327643	3300005563	Corn Rhizosphere	FVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRFGCYELAFRVERVPGRV*
Ga0066691_108561962	3300005586	Soil	GQVFHHGPVVDVYISHGRPWRVFAFARECDFGSFGNAEGTNHALAPCPRSTELGSFTDGDDRPGVVVKRFASPAASLGFHRGRPVKALSTCPAVNKRGCYELDYVVTRVKNAARRAVVR*
Ga0068870_106263181	3300005840	Miscanthus Rhizosphere	FVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPRRQGSTCPAVNRLGCYELAFRVERAGGV*
Ga0068870_108836892	3300005840	Miscanthus Rhizosphere	RDGQVFRGGPTFDLRLPRGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVPGRV*
Ga0075290_10156503	3300005889	Rice Paddy Soil	NGLLRARDGQVFGGGPTFDLHLARGRPWRVFVFTRECDFGSLGNADGATHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQRRGSTCPAVNRLGCYELAFRVERVRG*
Ga0075278_10322653	3300005893	Rice Paddy Soil	YLPRGRPWRLFVFTRECDWGSLGNADGSTHAMAPCPRSSEVGTFDGDDRPGYIVKRFRSPQASLGFHRGRPSRRALTTCPAVNKLGCYELDYVVTRVGR*
Ga0070712_1019931451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPRRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0068871_1022376372	3300006358	Miscanthus Rhizosphere	VFVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVPGRV*
Ga0074051_111393252	3300006572	Soil	NGLVRARDGQAFRNGPTVNLYVPRAKPWRLFVFTRECDWGRLGNADGAGHAMSPCPRPQEVGTFDGDDVPGMIVNRFRSPVASLGRHRGRPSKVGTTCPRVNRLGCYELEYVVTRVGAR*
Ga0074059_110979182	3300006578	Soil	FGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGISVAHFRSPAAALGLHRLRPQRLGSTCPAVNRLGCYELELRVDRVQG*
Ga0074062_100539451	3300006606	Soil	LRLPRGKPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGISVAHFRSPAAALGLHRLRPQRLGSTCPAVNRLGCYELELRVDRVQG*
Ga0066660_109558951	3300006800	Soil	GLLRAFDGKVFRNGPTLDVDLPHGRPLRVFAFARECDFGLFGNADGANHAMTPCPHSSEIGSFVDGDDRAGVIVKRFPSPAASLGFHRGRPIRALSTCPSVNKLGCYELDYVVTRVRSR*
Ga0079220_103440483	3300006806	Agricultural Soil	THDGQVFHNGPALDVFVPRGRPWRVFAFARECDFGSFGNADGAAHAMTPCPRSDEYGSFADGDDRPGVVVRRFSSSAAALGFHRGRPLRALSTCPTVNRRGCYELDYVVTRVR*
Ga0079220_104388311	3300006806	Agricultural Soil	QVFRNGPTLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPLRQGSTCPTINRLGCYELALRVERAGGV*
Ga0075434_1013982021	3300006871	Populus Rhizosphere	VFRGGPTFDLYLPRGRAWRVFVFTRECDFGSLGNADGASHPMTPCPRSSEFGTFDGDDVPGVSVAHFRSPAAAIGRHRLRPQRDGSTCPAVNTLGCYELAFRVERLPGRV*
Ga0068865_1016336062	3300006881	Miscanthus Rhizosphere	PTFDLQLARGRAWRVFVFTRECDFGSLGNADGATHAMTPCPRSSEFGTFDGDDVPGSSVVRFRSPAAALGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVRR*
Ga0075436_1004689193	3300006914	Populus Rhizosphere	LRLAPGRPWRVFVFTRECDFGVLGNADGPTHALAPCPTSKEFGTFDGDDVPGIAVLRFASPAASLGPHRLRPRRQGSTCPVVNRLGCYEVAFRVERVGV*
Ga0105248_114711823	3300009177	Switchgrass Rhizosphere	DLRLPRGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVPGRV*
Ga0105249_100677686	3300009553	Switchgrass Rhizosphere	WRVFVFARECDFGVLGNADGPTHALAPCPTSKEFGTFDGDDVPGIAVVRFASPAASLGPHRLRPRPQGSTCPVVNRLGCYEVAFRVERVGV*
Ga0126309_100179255	3300010039	Serpentine Soil	WRVFVFARECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGIAVARFSSPAAALGLHRLRPRRLDSTCPRVNRLGCYELSYRVERVRG*
Ga0126309_101952061	3300010039	Serpentine Soil	NGPTMNVRIARGRPWRLFVFTRECDFGSLGNADGATHAMPPCPRSAEFGTFDGDDVPGIAIARFKSPAAAVGVHRLRPRRRGSTCPAVNRLGCWELTYRVDRVRG*
Ga0126312_114330691	3300010041	Serpentine Soil	DFGSLGNADGPTHAMTPCPRSKEFGTFDGDDAPGFAVARFASPAAALGGHRLRPRRHGSTCPAVNRLGCYEIGFRVDRVAR*
Ga0126314_100444133	3300010042	Serpentine Soil	VPGRPWRIFVFTRECDFGLLGNADGPAHALAPCPTSKEFGTFDGDDVPGIAVARFASPAASLGRHRLRPRRHGSTCPVVNRLGCFEVAFRVERVGV*
Ga0126314_101317981	3300010042	Serpentine Soil	FGLLGNADGPTHALAPCPTSREFGTFDGDDVPGIAVARFASPAAAIGAHRLRPRLRGSTCPAVNRLGCYEVAFRVDRARPQPTSGAA*
Ga0126310_102482361	3300010044	Serpentine Soil	DFGLLGNADGPTHALAPCPTSREFGTFDGDDVPGIAVARFASPAAATGAHRLRPRLRGSTCPAVNRLGCYEIAFRVERAGP*
Ga0134082_102702992	3300010303	Grasslands Soil	DGRVFRNGPTLDVHLPRGRPFRVFAFARECDFGLFGNADGAHHAMTPCPRSSEIGSFVDGDDRGGVIVKRFPSPAASLGFHRGRPIRALSTCPAVNKLGCYELDYVVTRVRSR*
Ga0134128_102372091	3300010373	Terrestrial Soil	TLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0134127_125592391	3300010399	Terrestrial Soil	GLLRVRDGQVVRHGPTLDVYLPRGRPWRLFVFTRECDWGSLGNADGAAHAMTPCPRSGEVGTFDGDDRPGYVVKRFHSPEASLGFHRSRPSRRAITTCPPVNRLGCYELDYKITRVGR*
Ga0134121_104436151	3300010401	Terrestrial Soil	VFRNGPTLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPWRQGSTCPTINRLGCYELAFRVERAGGV*
Ga0151490_14968362	3300011107	Soil	TFDLRLPRGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGISVAHFRSPAAALGLHRLRPQRLGSTCPAVNRLGCYELELRVDRVQG*
Ga0137377_103030923	3300012211	Vadose Zone Soil	PAVDLYVARGRPWRLFVFTRECDFGSLGTADSAQHAMTPCPRSSEFGTFDGDDVPGFAVRRFRSAAASIGSHAARPSRTDSTCPPVNRLGCYALDYTVSRVGTR*
Ga0137387_110118152	3300012349	Vadose Zone Soil	RGRPLRVFAFARECDFGLFGNADGAHHAMTPCPRSSEIGSFVDGDDRGGVIVKRFPSPAASLGFHRGRPIRALSTCPSVNKLGCYELDYVVTRVRSR*
Ga0137372_101069071	3300012350	Vadose Zone Soil	PMLDVNLPRGRPFRVFAFARECDFGLFGNADGAHHAMTPCPRSSEIGSFVDGDDRGGLIVKRFPSPAASLGFHRGRPIRALSTCPAVNKLGCYELDYVVTRVRSR*
Ga0137386_105292603	3300012351	Vadose Zone Soil	HWTTWGNGLLRALDGKVFRNGPTLDVYLPRGRPLRVFAFARECDFGLFGNADGAHHAMTPCPRSSEIGSFVDGDDRGGVIVKRFPSPAASLGFHRGRPIRALSTCPSVNKLGCYELDYVVTRVRSR*
Ga0157295_103520731	3300012906	Soil	GGPSFDLRLPRGRPWRVFVFTRECDFGSLGNADGATHAMSPCPRSSEFGTFDGDDVPGISVARFASPAAALGPHRLRPRRHGSTCPAVNRLGCYEVGFRVDRVGGV*
Ga0164299_105785283	3300012958	Soil	HGGPSFDLRRPRGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGISAAHFRSPAAALGVHRLRPQRLGSTCPAVNRLGCYELDLRVDRVQG*
Ga0164299_110512291	3300012958	Soil	DFGSLGNAAGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPRRQGSTCPAVNRLGCYELAFRVERAGGV*
Ga0164299_111522571	3300012958	Soil	PRGRPWRLFVFTRECDWGSLGNADGAAHAMTPCPHSGEVGTFDGDDRPGYIVKRFDSPAASVGFHRSRPSRRAITTCPAVNKLGCYELDYIVTRVGR*
Ga0164302_103963671	3300012961	Soil	GNADGAAHAMTPCPRSSEFGTFDGDDVPGISAAHFRSPAAALGVHRLRPQRLGSTCPAVNRLGCYELDLRVDRVQG*
Ga0164307_111426402	3300012987	Soil	WRVFVFTRECDFGSLGNADGATHAMSPCTRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPQRQGSTCPAVNRLGCYELAFRVERAGGV*
Ga0164306_101815233	3300012988	Soil	GQVFHGGPSFDLRLPRGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGISVAHFRSPAAALGFHRLRPQRLGSTCPAINRLGCYELELRVDRVQG*
Ga0182008_100732604	3300014497	Rhizosphere	ALGNADGPGNAMTQCPKTTEIGTFDGDDVPGLAVVHFGSPAAAIGSHVLRPQRYGSTCPAVNRLGCYEIAFRVERVPGRV*
Ga0157376_118982723	3300014969	Miscanthus Rhizosphere	GSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPRRQGSTCPAVNRLGCYELAFRVERAGGV*
Ga0173480_112705352	3300015200	Soil	FVFTRECDFGSLGNADGATHAMSPCPRSSEFGTFDGDDVPGYAVAHFPSPAAALGLHVLRPQRQGSSCPAVNRLGCYEIAFRVERAGGV*
Ga0134072_100868331	3300015357	Grasslands Soil	VFAFARECDFGLFGNADGAHHAMTPCPRSSEIGSFVDGDDRGGVIVKRFPSPAASLGFHRGRPIRALSTCPAVNKLGCYELDYVVTRVRSR*
Ga0132256_1038250472	3300015372	Arabidopsis Rhizosphere	VFVFTRECDFGVLGNADGPGHALSPCPTSKEFGTFDGDDVPGIAVARFASPDAALGLHRLRPRRHGSTCPAVNRLGCYEVAFRVERAGRV*
Ga0184619_102261071	3300018061	Groundwater Sediment	QVFRGGPTLDIYVPRGRPWRLFAFARECDFGSLGSADGPGHAMLPCPRSSEFGTFDGDDRAGAIVNRFPSPEASLGTHRAHPSRLLSTCPPVNRLGCWELDYVVTR
Ga0184617_11635672	3300018066	Groundwater Sediment	PTVDVQLARGRPWRVFVFTRECDFGSLGNADGAQRAMTPCPRSSEFGTFDGDDVPGIAVARFSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0193705_10975981	3300019869	Soil	RECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGFAVARFSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0193700_10432413	3300019873	Soil	FTRECDFGSLGNADGAQRAMTPCPRSSEFGTFDGDDVPGIAVARFSSSAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0193728_10420311	3300019890	Soil	VPRGRPWRVFAFARECDFGSFGNADGAGHAMTPCPRSNEYGSFADGDDRPGVIVKRFASPAASLGFHRGRPLRALSTCPPVNRRGCYELDYVVTRVR
Ga0210382_100102525	3300021080	Groundwater Sediment	TRECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGIAVARFSSSAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0182009_103440023	3300021445	Soil	RECDGGALGNADGPGNAMTPCPKTTEIGTFDGDDVPGLAVVHFGSPAAAIGSHVLRPQRYGSTCPAVNRLGCYEIAFRVERVPGRV
Ga0222622_110254162	3300022756	Groundwater Sediment	HLAIGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQSHGSTCPAVNRLGCYELAFRVERVRG
Ga0247745_10503531	3300022898	Soil	FVFTRECDFGVLGNADGPGHALTPCPTSKEFGTFDGDDVPGISVARFASPAAALGPHRLRPRRHGSTCPAVNRLGCYEVGFRVDRVGGV
Ga0247672_10175341	3300024187	Soil	RLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0247687_10032521	3300024286	Soil	LARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0247690_10267261	3300024287	Soil	DLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0247666_10220183	3300024323	Soil	NGPTLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0247668_10697721	3300024331	Soil	VFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0207699_111446352	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0207660_105342591	3300025917	Corn Rhizosphere	LLRVRDGQVVRHGPTLDVYLPRGRPWRLFVFTRECDWGSLGNADGAAHAMTPCPRSGEVGTFDGDDRPGYVVKRFHSPEASLGFHRSRPSRRAITTCPPVNRLGCYELDYKITRLGR
Ga0207659_107147051	3300025926	Miscanthus Rhizosphere	RVRDGQVVRHGPTLDVYLPRGRPWRLFVFTRECDWGSLGNADGAAHAMTPCPRSGEVGTFDGDDRPGYVVKRFHSPEASLGFHRSRPSRRAITTCPPVNRLGCYELDYKITRVGR
Ga0207644_109115303	3300025931	Switchgrass Rhizosphere	RECDFGSLGNADGATHAMSPCPRSTEFGTFDGDDVPGIAVAHFRSPAAALGLHVLRPQRQGSTCPAVNRLGCYELAFRVERAGRV
Ga0207706_109422023	3300025933	Corn Rhizosphere	GRPWRVFVFTRECDFGSLGNADDAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRFGCYELAFRVERVPGRV
Ga0207667_109122081	3300025949	Corn Rhizosphere	FRGGPTFDLRLPRGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVPGRV
Ga0207651_104430921	3300025960	Switchgrass Rhizosphere	LRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0207708_107967713	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	FDLRLPAGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSTEFGTFDGDDVPGISVARFRSPAAAIGLHRLRPQRHGSTCPAVNRLGCYELAFRVERVPGRV
Ga0209027_10926003	3300026300	Grasslands Soil	VYVPLGHPWRLFVFTRECDWGSLGNADGAAHAMSPCPRSTEVGTFDGDDRPGYIVKHFRSPEASLGFHRGRPSRRTIATCPTVNKLGCYELDYIVTRVGR
Ga0209577_102760581	3300026552	Soil	VYLPRGRPLRVFAFARECDFGLFGNADGANHAMTPCPHSSEIGSFVDGDDRAGVIVKRFPSPAASLGFHRGRPIRALSTCPSVNKLGCYELDYVVTRVRSR
Ga0209073_101549933	3300027765	Agricultural Soil	TLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPLRQGSTCPTINRLGCYELALRVERAGGV
Ga0247750_10418022	3300027992	Soil	LAPGRPWRVFVFTRECDFGLLGNADGPTHALAPCPTSKEFGTFDGDDVPGIAVVRFASPAASLGPHRLRPRRQGSTCPVVNRLGCYEVAFRVERVGV
Ga0247663_10305193	3300028145	Soil	VFRDGPTLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPTINRLGCYELAFRVERAGGV
Ga0307321_10693651	3300028704	Soil	GQVFRGGPTLDVQLARGRPWRVFVFTRECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGIAVARVSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0307291_10887533	3300028707	Soil	VFTRECDFGSLGNADGATHAMSPCPRSTEFGTFDGDDVPGIAVAHFTSPAAALGVHRLRPVRRGSTCPAVNRLGCYELRYRVEGVRG
Ga0307311_101002643	3300028716	Soil	TRECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGIAVARFSSPASALGLHRLRPQRFGSTCPPANRLGCYELSYRVDRVRG
Ga0307298_102113392	3300028717	Soil	FVFTRECDFGSLGNADGATHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQSHGSTCPAVNRLGCYELAFRVERVRG
Ga0307307_101485091	3300028718	Soil	RDGQVFRGGPTLDVQLARGRPWRVFVFTRECDFGSLGNADGAQRAMTPCPRSSEFGTFDGDDVPGIAVARVSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0307316_100720543	3300028755	Soil	ECDFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGFAVARFSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0307316_101357713	3300028755	Soil	GPTLDVYLPRGKPWRLFVFTRECDWGSLGNADGAAHAMTPCPRSGEVGTFDGDDRPGYIVKRFRSPEASLGFHRSRPSRRAITTCPPVNKLGCYELDYKVTRVGR
Ga0307280_102296281	3300028768	Soil	RECDFGSLGNADGPTHALTPCPRSHEFGTFDGDDVPGIAVVRFATPTAALGVHRLRPRRRGSTCPAVNRLGCYEIGFRVDRVAR
Ga0307282_101003641	3300028784	Soil	DFGSLGNADGPTHAMTPCPRSHEFGTFDGDDVPGIAVVRFATPTAALGVHRLRPRRRGSTCPAVNRLGCYEIGFRVDRVAR
Ga0307283_100521103	3300028790	Soil	LHLASGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQSHGSTCPAVNRLGCYELAFRVERVRG
Ga0307290_101920911	3300028791	Soil	GLLRTHDGQVFRNGPALDVYVPRGRPWRVFAFARECDFGSFGNADGAGHAMTPCPRSSEYGSFADGDDRPGVVVKRFASPAASLGFHRGRPLRALSTCPRVNRLGCYELDYVVTRVR
Ga0307305_100701831	3300028807	Soil	RGRSWRLFVFTRECDFGSLGGADGPRHPMAPCPLSREFGSIADGDDRPGVIVKRFRSPAVSVGTHRGRPLRAFSTCPPVNKIGCYELDWVVTRVRDDAARESVIG
Ga0307305_102450021	3300028807	Soil	FRDGPTLDVRLAPGRPWRVFVFTRECDFGSLGNADGPTHALTPCPRSHEFGTFDGDDVPGIAVVRFAAPAAALGVHRLRPRRRGSTCPAVNRLGCYEIGFRVDRVSR
Ga0307292_105022311	3300028811	Soil	SWRLFVFTRECDFGSLGGAHGPRHPMAPCPLSREFGSIADGDDRPGVIVKRFRSPAVSVGTHRGRPLRAFSTCPPVNKIGCYELDWVVTRVRDDAARESVIG
Ga0247825_105366713	3300028812	Soil	GRTPGLRLAPGRPWRVFVFTRECDFGLLGNADGPTHALAPCPTSKEFGTFDGDDVPGIAVVRFASPAASLGPHRLRPRRQGSTCPAVNRLGCYEVAFRVERVGV
Ga0307302_102236301	3300028814	Soil	LRVRDGQVVRRGPVLDVYVSRGRPWRLFVFTRECDFGSLGGADGPRHPMAPCPLSREFGSIADGDDRPGVIVKRFRSPAVSLGRHSGRPLRALSTCPAANRLGCYQLDWVVTRVRDEGARLRR
Ga0307296_100769031	3300028819	Soil	VFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQSHGSTCPAVNRLGCYELAFRVERVRG
Ga0307310_103302883	3300028824	Soil	LHLVRGRPWRVLVFTRECDFGSLGNADGAGHAMTPCPRSTEFGTFDGDDVPGTAVARFASPAAALGLHRLRPARHGSTCPAVNKLGCYEIAFRVERLRG
Ga0307289_102538281	3300028875	Soil	LFVFTRECDFGSLGNADGATHAMSPCPRSTEFGTFDGDDVPGIAVAHFTSPAAALGVHRLRPVRRGSTCPAVNRLGCYELRYRVEGVRG
Ga0307300_100814443	3300028880	Soil	DFGSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGFAVARFSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0307300_101434281	3300028880	Soil	DLHLASGRPWRVFVFTRECDFGSLGNADGAAHAMTPCPRSSEFGTFDGDDVPGSSVARFRSPAAALGLHRLRPQSHGSTCPAVNRLGCYELAFRVERVRG
Ga0307277_105557301	3300028881	Soil	GSLGNADGAQHAMTPCPRSSEFGTFDGDDVPGFAVARFSSPAAALGLHRLRPQRVGSTCPPANRLGCYELSYRVDRVRG
Ga0307304_102486611	3300028885	Soil	RECDFGSLGNADGPTHAMTPCPRSHEFGTFDGDDVPGIAVVRFAAPAAALGVHRLRPRRRGSTCPAVNRLGCYEIGFRVDRVSR
Ga0307469_122114841	3300031720	Hardwood Forest Soil	VFTRECDFGSLGTADSAQHAMTPCPRSSEFGTFDGDDVPGFVVRRFRSAAASIGSHAARPSRTDSTFPPVNRLGCYALDYVVSRVGTR
Ga0307468_1005020273	3300031740	Hardwood Forest Soil	YVPRGRPWRVFVFTRECDFGSFGNADGARQAMTPCPLSTEYGSFADGDDRPGVVVKRFASPAASLGFHRGRPIKALSTCPAVNRLGCYELDYVVTRVRS
Ga0308175_1021147541	3300031938	Soil	GQVVRAGPTFDLRLAPGRPWRVFVFARECDFGVLGNADGPSHALAPCPTSKEFGTFDGDDVPGIAVARFASPDAALGLHRLRPRRHGSTCPAVNRLGCYEIAFTVERVGPS
Ga0310885_102758963	3300031943	Soil	EGQVFRNGPTLDLRLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPWRQGSTCPTINRLGCYELAFRVERAGGV
Ga0307409_1000603215	3300031995	Rhizosphere	VRGGPTFDVRLVPGRPWRIFVFTRECDFGLLGDADGPAHALAPCPTSKEFGTFDGDDVPGIAVARFASPAASLGRHRLRPRRHGSTCPVVNRLGCFEVAFRVERVGV
Ga0308176_108544681	3300031996	Soil	GPTFDLRLVPGRPWRVFVFTRECDFGLLGNADGPTHALAPCPTSKEFGTFDGDDVPGIAVARFASPAAAIGAHRLRPRLRGSTCPAVNRLGCYEVAFRVDRVGP
Ga0310890_100779191	3300032075	Soil	RLARGKPWRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFRSPAAALGLHVLRPQRQGSTCPAVNRLGCYELAFRVERAGGV
Ga0307471_1043294422	3300032180	Hardwood Forest Soil	AHDGQVFRHGPVLDVFVPRGRPWRVFAFTRECDFGSFGNADGATHAMTPCPRSREQGSFSDGDDRPGIVVRRFASPAAGLGFHRGRPINALSTCPDVNRLGCYELDYVVTRVRLR
Ga0307472_1003247151	3300032205	Hardwood Forest Soil	GQVFRHGPVLDVFVPRGRPWRVFAFTRECDFGSFGNADGATHAMTPCPQSREQGSFSDGDDRPGIVVRRFASPAAGLGFHRGRPINALSTCPAVNRLGCYELDYVVTRVRLR
Ga0307472_1015644812	3300032205	Hardwood Forest Soil	WRVFVFTRECDFGSLGNADGATHAMSPCPRSNEFGTFDGDDVPGFAAAHFHSPAAALGLHVLRPQRQGSTCPAVNRLGCYELAFRVERAGGV
Ga0335081_103886964	3300032892	Soil	GQVFRHGPAVDLYVARGRPWRLFVFTRECDFGSLGDADSAKHAMTPCPRSNEFGTFDGDDVPGFVVKRFRSAAASIGSYAARPSRTDSTCPPVNRLGCYALDYVVSRVGKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065992

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences