Metagenome / Metatranscriptome Family F065982

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065982
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	101 residues
Representative Sequence	DDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKPRDVRGPFTAEAALADPANHVVTIENHADWTTHEVTAPIPDDTNTIAFGVFLAGPGRIELRDTRLTRTGLAD
Number of Associated Samples	107
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.63 %
% of genes near scaffold ends (potentially truncated)	93.70 %
% of genes from short scaffolds (< 2000 bps)	85.04 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.331 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.882 % of family members)
Environment Ontology (ENVO)	Unclassified (36.220 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.606 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.87% β-sheet: 38.93% Coil/Unstructured: 54.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
b.18.1.0: Galactose-binding domain-like	d4xuoa_	4xuo	0.69
b.18.1.0: Galactose-binding domain-like	d4xuoa_	4xuo	0.69
b.18.1.7: Galactose-binding domain-like	d1h6ya_	1h6y	0.67
b.18.1.7: Galactose-binding domain-like	d1h6ya_	1h6y	0.67
b.18.1.14: Galactose-binding domain-like	d1guia_	1gui	0.66
b.18.1.14: Galactose-binding domain-like	d4bj0a1	4bj0	0.66
b.18.1.14: Galactose-binding domain-like	d1guia_	1gui	0.66
b.18.1.14: Galactose-binding domain-like	d4bj0a1	4bj0	0.66
b.18.1.11: Galactose-binding domain-like	d1gnya_	1gny	0.65
b.18.1.11: Galactose-binding domain-like	d1gnya_	1gny	0.65

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00941	FAD_binding_5	11.81
PF00370	FGGY_N	7.87
PF12840	HTH_20	5.51
PF03450	CO_deh_flav_C	4.72
PF02738	MoCoBD_1	2.36
PF01139	RtcB	2.36
PF13560	HTH_31	1.57
PF14027	Questin_oxidase	1.57
PF00111	Fer2	1.57
PF05173	DapB_C	1.57
PF13397	RbpA	1.57
PF00496	SBP_bac_5	1.57
PF04185	Phosphoesterase	0.79
PF13367	PrsW-protease	0.79
PF11716	MDMPI_N	0.79
PF13424	TPR_12	0.79
PF01799	Fer2_2	0.79
PF10269	Tmemb_185A	0.79
PF13546	DDE_5	0.79
PF01381	HTH_3	0.79
PF02782	FGGY_C	0.79
PF08031	BBE	0.79
PF13581	HATPase_c_2	0.79
PF06912	DUF1275	0.79
PF13180	PDZ_2	0.79
PF04454	Linocin_M18	0.79
PF02492	cobW	0.79
PF01636	APH	0.79
PF07362	CcdA	0.79
PF13602	ADH_zinc_N_2	0.79
PF00903	Glyoxalase	0.79
PF12680	SnoaL_2	0.79
PF13410	GST_C_2	0.79
PF00730	HhH-GPD	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	2.36
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	1.57
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.79
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.79
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.79
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.79
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.79
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.79
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.79
COG5302	Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.67 %
Unclassified	root	N/A	45.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.71 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.79 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8.66 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.15 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.36 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.79 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.66 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.15 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.57 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.79 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.79 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.79 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.66 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	1.57 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.79 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	0.79 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.79 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.79 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.79 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.66 %
Aeromicrobium piscarium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium piscarium	1.57 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.79 %
Mycolicibacterium fortuitum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium fortuitum	0.79 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.79 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.79 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.79 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.66 %
Aeromicrobium piscarium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium piscarium	1.57 %
Frankia sp. Ea1.12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Ea1.12	0.79 %
Mycolicibacterium fortuitum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium fortuitum	0.79 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.79 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.79 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.79 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10097212	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300002245\|JGIcombinedJ26739_100679150	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300003505\|JGIcombinedJ51221_10272530	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005435\|Ga0070714_100879391	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005537\|Ga0070730_10154156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1556	Open in IMG/M
3300005591\|Ga0070761_10408590	Not Available	829	Open in IMG/M
3300005610\|Ga0070763_10343668	Not Available	829	Open in IMG/M
3300005610\|Ga0070763_10948355	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006059\|Ga0075017_101285466	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006176\|Ga0070765_100109961	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300006893\|Ga0073928_10203123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1551	Open in IMG/M
3300009524\|Ga0116225_1545200	Not Available	515	Open in IMG/M
3300009698\|Ga0116216_10010541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5853	Open in IMG/M
3300010048\|Ga0126373_12245000	All Organisms → cellular organisms → Bacteria → Terrabacteria group	607	Open in IMG/M
3300010371\|Ga0134125_11906503	Not Available	646	Open in IMG/M
3300010376\|Ga0126381_102045093	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300010379\|Ga0136449_100161282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4367	Open in IMG/M
3300010379\|Ga0136449_103727528	Not Available	575	Open in IMG/M
3300010880\|Ga0126350_10721138	Not Available	999	Open in IMG/M
3300010880\|Ga0126350_10963200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1479	Open in IMG/M
3300014169\|Ga0181531_10776641	Not Available	597	Open in IMG/M
3300014201\|Ga0181537_10056239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2663	Open in IMG/M
3300016341\|Ga0182035_11838729	Not Available	549	Open in IMG/M
3300016445\|Ga0182038_12126850	Not Available	509	Open in IMG/M
3300017928\|Ga0187806_1069054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1096	Open in IMG/M
3300017932\|Ga0187814_10078569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1212	Open in IMG/M
3300017937\|Ga0187809_10114332	Not Available	913	Open in IMG/M
3300017937\|Ga0187809_10204446	Not Available	701	Open in IMG/M
3300017972\|Ga0187781_10267705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300017973\|Ga0187780_10900757	Not Available	642	Open in IMG/M
3300018034\|Ga0187863_10304505	Not Available	886	Open in IMG/M
3300018046\|Ga0187851_10586842	Not Available	630	Open in IMG/M
3300018085\|Ga0187772_10537971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300018085\|Ga0187772_10934732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	631	Open in IMG/M
3300018468\|Ga0066662_12323620	Not Available	563	Open in IMG/M
3300020579\|Ga0210407_10557494	Not Available	894	Open in IMG/M
3300020580\|Ga0210403_10369040	Not Available	1174	Open in IMG/M
3300020582\|Ga0210395_10682726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium fortuitum	769	Open in IMG/M
3300021171\|Ga0210405_11163833	Not Available	573	Open in IMG/M
3300021181\|Ga0210388_10060417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3175	Open in IMG/M
3300021362\|Ga0213882_10224884	Not Available	776	Open in IMG/M
3300021374\|Ga0213881_10169894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300021401\|Ga0210393_10787549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300021402\|Ga0210385_10002289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11568	Open in IMG/M
3300021403\|Ga0210397_11265075	Not Available	573	Open in IMG/M
3300021406\|Ga0210386_10229264	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300021433\|Ga0210391_10870223	Not Available	703	Open in IMG/M
3300021433\|Ga0210391_11227468	Not Available	580	Open in IMG/M
3300021474\|Ga0210390_10282991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1404	Open in IMG/M
3300021474\|Ga0210390_11230926	Not Available	603	Open in IMG/M
3300021474\|Ga0210390_11280906	Not Available	589	Open in IMG/M
3300021479\|Ga0210410_11167479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	661	Open in IMG/M
3300022873\|Ga0224550_1010442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1307	Open in IMG/M
3300027030\|Ga0208240_1006445	Not Available	1186	Open in IMG/M
3300027107\|Ga0208367_104753	Not Available	937	Open in IMG/M
3300027171\|Ga0207947_1002207	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1177	Open in IMG/M
3300027619\|Ga0209330_1041109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300027737\|Ga0209038_10092902	Not Available	909	Open in IMG/M
3300027783\|Ga0209448_10016826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2386	Open in IMG/M
3300027857\|Ga0209166_10106018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1565	Open in IMG/M
3300027908\|Ga0209006_10304776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1358	Open in IMG/M
3300028906\|Ga0308309_11194250	Not Available	656	Open in IMG/M
3300030494\|Ga0310037_10126872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300030617\|Ga0311356_11409666	Not Available	633	Open in IMG/M
3300030706\|Ga0310039_10330732	Not Available	571	Open in IMG/M
3300030739\|Ga0302311_10740469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	645	Open in IMG/M
3300030815\|Ga0265746_1052808	Not Available	570	Open in IMG/M
3300031543\|Ga0318516_10868838	Not Available	508	Open in IMG/M
3300031546\|Ga0318538_10209099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1043	Open in IMG/M
3300031573\|Ga0310915_10150343	Not Available	1609	Open in IMG/M
3300031640\|Ga0318555_10687039	Not Available	553	Open in IMG/M
3300031682\|Ga0318560_10706316	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_101782041	Not Available	813	Open in IMG/M
3300031708\|Ga0310686_106496094	Not Available	1314	Open in IMG/M
3300031708\|Ga0310686_114540169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5050	Open in IMG/M
3300031713\|Ga0318496_10271705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	935	Open in IMG/M
3300031715\|Ga0307476_11213881	Not Available	552	Open in IMG/M
3300031715\|Ga0307476_11358544	Not Available	518	Open in IMG/M
3300031718\|Ga0307474_10258454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1335	Open in IMG/M
3300031723\|Ga0318493_10789620	Not Available	535	Open in IMG/M
3300031724\|Ga0318500_10021964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2453	Open in IMG/M
3300031736\|Ga0318501_10143031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1227	Open in IMG/M
3300031747\|Ga0318502_10216891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1110	Open in IMG/M
3300031754\|Ga0307475_11343881	Not Available	552	Open in IMG/M
3300031764\|Ga0318535_10112759	Not Available	1197	Open in IMG/M
3300031768\|Ga0318509_10831677	Not Available	510	Open in IMG/M
3300031771\|Ga0318546_10097092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1928	Open in IMG/M
3300031771\|Ga0318546_11004254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	587	Open in IMG/M
3300031782\|Ga0318552_10468955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	643	Open in IMG/M
3300031794\|Ga0318503_10102963	Not Available	907	Open in IMG/M
3300031794\|Ga0318503_10214562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300031795\|Ga0318557_10091488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1337	Open in IMG/M
3300031797\|Ga0318550_10492698	Not Available	591	Open in IMG/M
3300031805\|Ga0318497_10866320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Ea1.12	507	Open in IMG/M
3300031819\|Ga0318568_10282442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1030	Open in IMG/M
3300031823\|Ga0307478_11265741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300031823\|Ga0307478_11502591	Not Available	557	Open in IMG/M
3300031831\|Ga0318564_10180800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300031833\|Ga0310917_10203513	Not Available	1324	Open in IMG/M
3300031846\|Ga0318512_10547890	Not Available	588	Open in IMG/M
3300031880\|Ga0318544_10360023	Not Available	565	Open in IMG/M
3300031897\|Ga0318520_10211956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300031912\|Ga0306921_11005437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	940	Open in IMG/M
3300031912\|Ga0306921_11420206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300031912\|Ga0306921_12152775	Not Available	589	Open in IMG/M
3300031959\|Ga0318530_10316377	Not Available	646	Open in IMG/M
3300031981\|Ga0318531_10234692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	828	Open in IMG/M
3300032043\|Ga0318556_10027394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2616	Open in IMG/M
3300032052\|Ga0318506_10417572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300032055\|Ga0318575_10082271	Not Available	1536	Open in IMG/M
3300032065\|Ga0318513_10025542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2512	Open in IMG/M
3300032066\|Ga0318514_10669049	Not Available	552	Open in IMG/M
3300032067\|Ga0318524_10071690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1684	Open in IMG/M
3300032067\|Ga0318524_10243579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	924	Open in IMG/M
3300032067\|Ga0318524_10391321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium piscarium	724	Open in IMG/M
3300032068\|Ga0318553_10035141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2420	Open in IMG/M
3300032089\|Ga0318525_10041725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium → Aeromicrobium piscarium	2261	Open in IMG/M
3300032160\|Ga0311301_10094945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5906	Open in IMG/M
3300032160\|Ga0311301_10578372	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300032205\|Ga0307472_100361437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1197	Open in IMG/M
3300032515\|Ga0348332_10036200	Not Available	786	Open in IMG/M
3300032782\|Ga0335082_10120365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2576	Open in IMG/M
3300033290\|Ga0318519_10600791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.55%
Aquatic	Environmental → Aquatic	9.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.83%
Freshwater	Environmental → Aquatic → Freshwater	7.87%
Peat	Environmental → Terrestrial → Peat	2.36%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%
Sediment	Environmental → Aquatic → Sediment	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.87%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.57%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.15%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.57%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.51%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.57%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.57%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.57%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.79%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027107	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF029 (SPAdes)	Environmental	Open in IMG/M
3300027171	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF039 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100972121	3300001867	Forest Soil	RWRDYSATAQQGTAVLAAAVPQPTGFAWLAQEILAGDYHGAAVTFRGQFRAAGATGLAGLFVRIMEPRDVRGPFTAAEARADPKNHLVAVVSEAGWAGYEVTAPVPAGASTFIFGVFLAGPGRIELRRAELTRAG*
JGIcombinedJ26739_1006791501	3300002245	Forest Soil	RGEFRVTGGAGRAGLFLRIMKPGDLRGPMTADVALADPRNHIVTIADHAEWSAHEVTAPVPDDTNTVAFGVLLAGPGRIELRAPKLTSTNK*
JGIcombinedJ51221_102725302	3300003505	Forest Soil	GTAVTFRGQLRTPATTGRTGLFLRVMRQPAGHGPFTTQGALTDPSNHIVTIANDAGWSTHEVTAHIPDDADTVAFGVFLAGPGRIDLRDPELIPQQSVAATRAERPAKA*
Ga0070714_1008793913	3300005435	Agricultural Soil	DYRGAAVTFRGQFRTPEGTGLAGLFLRVMTPQDIHGPFTAQAALADPANHVVTLESPGDWTIREVTAPIPDDANTVAFGLFLNGPGRIELRDLEFTARR*
Ga0070734_100229451	3300005533	Surface Soil	SAVPQPEGFAYLIQEIFAEDYRGATITFRGQVRVSHGEGPAGLVVRVMRPGDVPGPMTAAQALADPANHVVTLDGRDGWSGPEIIVPVPDDANTMAFGTFLAGPGRIELRHAGLTSAN*
Ga0070730_101541563	3300005537	Surface Soil	TTVTFRGEFRVTGGAGQAGLFFRVMRPADLHGPVTAAQALADPANHVVTVEGDWSPHEVTATVPADTNTVGFGVFLAGPGRIELRAAELTTKN*
Ga0070761_104085901	3300005591	Soil	QEIFADDYRGAALIFRGEFRIAEGTGLAGMFLRVMKPSSLHGPFTAQAALADPANHIVTLEGPGDWATREVTAPIPDDANTVAFGVFLAGPGRIELRNPELTPAGLAY*
Ga0070763_103436682	3300005610	Soil	IFADDYRGTTVTFRGQFRIPDTTGRAGLFLRVMQPRDARGPFTAEAALADPGNHIVIVEGPGDWTTHEITAPIPDDTNTVAFGVFLAGPGQIELRDPELARTGLAY*
Ga0070763_109483551	3300005610	Soil	FRVTGGAGQAGLFVRVMRPADQRRPMTVAQALADPANHVVTVQGRDDWTTRETTAPVPDDTNTVAFGVFLVGPGRIELRAAELTMEN*
Ga0075017_1012854661	3300006059	Watersheds	IFADDYRGTTVTFRGQFRTPEGTGPAGLFLRVMKPRDPRGPFTAQAALADPANHIVILEGPGDWTTHEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELTRAGLAY*
Ga0070765_1001099613	3300006176	Soil	IFADDYRGAAVTFRGQFRTPEGAGRAGLFLRVMQPRDARGPLTAKAALADPANHIVTLEGPGDWTTHEVTAPIPDDANTVAFGVFLAGPGRIELRDPELTRAGRAY*
Ga0073928_102031232	3300006893	Iron-Sulfur Acid Spring	VTGGAGQAGLFVRVIRPADLHGPVTAAQALADPANHVVTVEGDGEWTGYEVTATVPAGTNTVGFGVFLAGPGRIELRAAELTSEN*
Ga0116225_15452001	3300009524	Peatlands Soil	FLRVMKPQHVHGPFTAEAALADPANHVVTIENHADWTTHQVTAPIPDDTNTIAFGVFLACPGRIELRGTRLTRTGLAD*
Ga0116216_100105411	3300009698	Peatlands Soil	DDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKPRDVRGPFTAEAALADPANHVVTIENHADWTTHEVTAPIPDDTNTIAFGVFLAGPGRIELRDTRLTRTGLAD*
Ga0126373_122450001	3300010048	Tropical Forest Soil	DYRGATVTFRGQFRIPEGTGQAGLFMRVMKPRDLHGPFTAQAALADPANHIVTLESPGGWTTHEVTAPIPHDANTVAFGLFLAGPGQIALRAPELTRDGSA*
Ga0134125_119065032	3300010371	Terrestrial Soil	IFADDYRGAAVTFRGQFRTPEGTGLAGLFLRVMTPQDIHGPFTAQAALADPANHVVTLESPGDWTIREVTAPIPDDANTVAFGLFLNGPGRIELRDLEFTARR*
Ga0126381_1020450931	3300010376	Tropical Forest Soil	TFRGQFRTSGGTGPAGLFLRIMKPRDLHGPFTAQAALSDPANHIVTLEAPGDWTTHEVTAPIPDDADIVAFGLFLAGPGRIELRDPELTRDGLALLAT*
Ga0136449_1001612826	3300010379	Peatlands Soil	WLAQEIYADDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKPRDVRGPFTAEAALADPANHVVTIENHADWTTHEVTAPIPDDTNTIAFGVFLAGPGRIELRDTRLTRTGLAD*
Ga0136449_1037275281	3300010379	Peatlands Soil	WLAQEIYADDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKPQHVHGPFTAEAALADPANHVVTIENHADWTTHQVTAPIPDDTNTIAFGVFLACPGRIELRGTRLTRTGLAD*
Ga0126350_107211381	3300010880	Boreal Forest Soil	FAEDYRGTTVTFRGQFRGTHGQAGLFIRVMRPGDPRGPMTAAQALADPANHVVTVEGHGEWAAHEVAAMIPADANTVAFGAFLAGPGRIELRAPQLTMDN*
Ga0126350_109632001	3300010880	Boreal Forest Soil	VPQPEGFAYLVQEIFADDYRGTTVTFRGEFRATGGADQAGLFVRVMRPADLHGPVTAAQALADPANHVVTVEGSWSPHEVTASVPADTNTVGFGVFLAGPGRIELRAAELTTEN*
Ga0181531_107766412	3300014169	Bog	FRTAEGTGLAGLFLRVVKPSNLHGPFTAQAALADPANHIVTLLGPSDWTTHEVTAPIPEDANTVAFGVFLAGPGRIELRNLELTRAGLAY*
Ga0181537_100562396	3300014201	Bog	AAVAQPGGFAWLAQEIFADDYRGAAVTFRGQFRVAEGTGLAGLFLRVVKPSNLHGPLTAQAALADPANHIVTLQGPSDWNAHEVTAPIPDDANTVVFGVFLAGPGRIELRNPKVAGEA*
Ga0182035_118387291	3300016341	Soil	QEIFADDYRGTTVTFRGQFRTPDTTGRAGLFLRVMQPQDVRGPFTAEAALADPASHVVNIEGHADWTTHEATAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0182038_121268501	3300016445	Soil	QEIFADDYRGAAVTFRGLFRIPNTTGRAGLFLRVMRPQDVRGPFTAEAALADPANHVVTIEGHADWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAN
Ga0187806_10690541	3300017928	Freshwater Sediment	EGFAWLAQEIFADDYRGAAVTFRGQFRTPDTTGLAGLFLRVMKPRDLHGPFTAQAALADPANHIVTLEGPSDWTTHEVIAPIPDDANTVAFGLFLAGPGRIELRDPELTRAGLAY
Ga0187814_100785691	3300017932	Freshwater Sediment	QEIYADDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKLQDVRGPFTAEAALADPANHVVTIENHADWTTHEVTAPIPDDTNTIAFGVFLAGPGRIELRDTRLTRTGLSD
Ga0187809_101143321	3300017937	Freshwater Sediment	DTTGRAGLFLRVMQPQDLRGPFTAQAALADPANHIVTVEGHGDWTTHEVTAPIPDDTNTVAFGVFLAGPGRIKLRDPELTRAGLAWAGLAY
Ga0187809_102044461	3300017937	Freshwater Sediment	TAGRAGLFLRVMRAPAVHGPFTARAARADPGNHIVSVASDAGWTGHEVTARVPGDASTVMFGIFLAGPGRIELRDPELTPDA
Ga0187781_102677053	3300017972	Tropical Peatland	AVTFRGQFRTPDTTGRAGLFLRVTGPQDVHGPFTAEAALADPANHIVTIANHADWTLHEVTAPIPDEANTVAFGVFLAGPGRIELRDPGLTRAGPAD
Ga0187780_109007572	3300017973	Tropical Peatland	YRGADVVFRGQVRVPPEAGRAGLFLRIRNPADALGQLTQAAALADPANHIVTVEDRGDWTTCEVAAQIPADTESILFGVFLAGPGRIELHDPELTRAGL
Ga0187863_103045052	3300018034	Peatland	FAWLVQEIFADDYRGTTITFRGQFSAPGTTGRTGLFVRVMTAPSSHGPFTAEAALADPSNHIVTIENLADWSTHEVTAPIPDDADTVAFGVFLAGPGRINLRAPELIPAGPA
Ga0187851_105868421	3300018046	Peatland	VTFRGQFRVPEGTGLAGLFLRVMKPSTLRGPLTAQAALADPANHIVTLEGPGDWASREVTAPIPDDANTVAFGVFLAGPGRIELRNPELTQAGLAYLMGVLR
Ga0187772_105379713	3300018085	Tropical Peatland	RTPDTTGRAGLFLRVTGPQDVHGPFTAEAALADPANHIVTIANHADWTLHEVTAPIPDEANTVAFGVFLAGPGRIELRDPGLTRAGLADELRGIRWR
Ga0187772_109347321	3300018085	Tropical Peatland	VGTGLAGLFLRVMKPQDLHGPFTAQAAPADPANHIVTLESPGDWTTHEVTAPIPDDANTVAFGLFLAGPGRIELRTPGLTRGGLAY
Ga0066662_123236201	3300018468	Grasslands Soil	AGFAWLAQEIFADDYRGAAVTFRGQFRTPEGTGPAGLFLRVMKPPDLHGPFTAQAALADPANHIVTLEGPGDWTTHEVTAPIPDDANTVAFGLFLAGPGRIELRDAELTQPGLAY
Ga0210407_105574941	3300020579	Soil	VPQPEGFAWLAQEVFADDYQGTTVTFRCQFRVPPTAARAGLFLRVMKPRDLRGPFTAQAALADPANHIITLEGPGDWTAHEVTAAIPDDANTVAFGVFLIGPAGSNCVPPS
Ga0210403_103690402	3300020580	Soil	TVGFRGQFRVTEGAGRAGLFLRVMKPGDLRGPMTADVALADPRNHIVTIVGHGEWSAHEVTAPVPDDTNTVAFGVFLVGPGRIELRAAELTREN
Ga0210395_106827261	3300020582	Soil	ARPEGFAWLAQEIFADDYRGATVTFRGQFRTPDATGRAGLFLRVMQPRDVRGPFTAQAALADPKNHVVTVVNQAGWTTHEVTAAVPDDASTLAFGVYLTGPGRIELRDPELNGAEPAY
Ga0210405_111638332	3300021171	Soil	YQGTTVTFRCQFRVPPTAARAGLFLRVMKPRDLRGPFTAQAALADPANHIITLEGPGDWTAHEVTAAIPDDANTVAFGVFLIGPGRIELRAAELTREN
Ga0210388_100604171	3300021181	Soil	RAGLFLRVMKPRDLHGPFTAQAALADPANHVVTVEGHDGWTAHEVTAPVPDDANTVAFGVFLVGPGRIELRTPQLTIEN
Ga0213882_102248841	3300021362	Exposed Rock	TFRGQVRAPQGTGLAGLFLRVMHPQDVRGPVTAEAALADPANHVITLEGPGDWSTHEVTAPIPDDTNTIAFGVFLAGPGQIELHHPGLTRTGLAD
Ga0213881_101698941	3300021374	Exposed Rock	TPDATGRSGLFLRVMKPRDLHGPFTAQAALADPANHILTLEAPGDWTTHQVTAPIPDDANTVAFGLFLAGPGRIELRDPELTPDRLALLAT
Ga0210393_107875492	3300021401	Soil	WLVQEIFAEDYRGTTITFRGSLRAPGTAGRTGLFLRVMEPPTVHGPFTAQAAVTDPSNHIVTIANQADWSTHEVTAPIPHQADTIAFGVFLAGPGRIDLRDPELIPAGPAHVEDRSVEP
Ga0210385_1000228910	3300021402	Soil	IFADDYRGATVTFRGRFRTPDATGRAGLFLRVMQPRDVRGPFTAQAALADPKNHVVTVVNQAGWTTHEVTAAVPDDASTLAFGVYLTGPGRIELRDPELNGAEPAY
Ga0210397_112650752	3300021403	Soil	EGAGHAGLFLRVMQPRDARGPFTTQAALADPANHIITLEDPGDWTTHEVTAPIPDDANTVAFGVFLAGPGRIELRDPELTRAGRAY
Ga0210389_107345751	3300021404	Soil	GLFLRVMQPQDVRGPVTAEAALADPANHIVTLEGPGDWTTHEVTAPIPDETNTIAFGVFLAGPGRIDLRDPELIPAGPA
Ga0210386_102292644	3300021406	Soil	PEGFAWLAQEIFADDYRGTTVTFRGQLRAPGTTGRTGLFVRVRNYPTGHGPFTAEGALADPSNHIVTIANDAGWRTHQVTAPIPHDADTVAFGVFLAGPGRIDLRGPELIPQQPVAATRAERPTKE
Ga0210391_108702232	3300021433	Soil	QFRAPEGAGRAGLFLRVMKPRDLHGPFTAQAALADRANHIVTLEGPGDWTAREVTAAIPDDANTVAFGVFLIGPARIELRTPQLTIEN
Ga0210391_112274681	3300021433	Soil	AWLAQEIFADDYRGTTITFRGHRRTPATTGRTGLFLRVMKHPTGHGPFTAQSALADPSNHIVTIANDADWSTHEVTAPIPDDADTVAFGVFLAGPGRIDLRDPELVPQQPVAATRAERPAKE
Ga0210390_102829911	3300021474	Soil	GLFVRVMRPADLRGPMTVAQALADPANHVVTVQDRGDWTAREVTAPVPDDTNTVAFGVFLVGPGQIELRTPQLTTEN
Ga0210390_112309262	3300021474	Soil	PQPEGFAYLVQEIFADDYRGTTVTFRGEFRVTGGAGQAGLFVRVMRPADLRGPMTLAQALADPANHVVTVAGHEQAWSAREVTAPVPADTNTVAFGVFLVGPGRIELRDPQLTMEN
Ga0210390_112809062	3300021474	Soil	ADDYRGTTITFRGKLRAPGTTGRTGLFLRVMNPPTVHGPFTAQSAVADPSNHIVTIANHADRSSHEVTAPIPHQADTIAFGVFLAGPGRIDLRDPELIPAGPAHVEDRSVEP
Ga0210410_111674791	3300021479	Soil	GFAWLAQEIFADDYRGTAVTFRGQFRTPDTTGRTGLFLRVMKPPTIHGPFTAQSALADPANHIVTIANHADWTTYDVTAPVPDDTNTLAFGVFLSGPGRIELRNPTLTRTVLPD
Ga0224550_10104422	3300022873	Soil	ADDYRGAALTFRGQFRAPEGTGLCGLFLRVMKPRTLHGPPTAQAALADPANHIVTLQGPSDWTTHEVTAPIPDDANTVAFGVFLAGPGRIELRNPELTQAGLAY
Ga0208240_10064452	3300027030	Forest Soil	LAQEIFADDYRGATVTFRGQFRALEGAGRAGLFLRVMKPRDLHGPFTAQAALADPANHVVTVEGHDGWTAHEVTAPVPDDANTVAFGVFLVGPGRIELRTPQLTIEN
Ga0208367_1047532	3300027107	Forest Soil	RGQFRAPEGAGRAGLFLRVMKPRDLHGPFTAQAALADPANHVVTVEGHDGWTAHEVTAPVPDDANTVAFGVFLVGPGRIELRTPQLTIEN
Ga0207947_10022071	3300027171	Forest Soil	TAVTFRGQLRTPATTGRTGLFLRVMRQPAGHGPFTTQGALTDPSNHIVTIANDAGWSTHEVTAHIPDDADTVAFGVFLAGPGRIDLRDPELIPQQSVAATRAERPAKA
Ga0209330_10411091	3300027619	Forest Soil	PEGFAWLVQEIFADDYRGTTITFRGKFRAPGTTGRTGLFLRVMNPPTVHGPFTAQSALADPSNHIVTIANHADWSSHEVTAPIPHQADTIAFGVFLAGPGRIDLRDPELIPAGPA
Ga0209038_100929022	3300027737	Bog Forest Soil	LRGQFRAPRGAGRAGLFLRVMKPRDLKGPFTAQAALADPANHIVTVEGPGDWTTYEVTAPVPDDANTVAFGVFLVGSGRIELRDPELTREN
Ga0209448_100168261	3300027783	Bog Forest Soil	FQEIYADDYRGAAVTFRGQFRTPQGTGPAGLFLRVMKPRDLHGPFTAQAALADPANHIVTLEGPRDWTTHEVTAPVPDDANTVAFGVFLAGPGRIELRDPKLTTADQGKLAIP
Ga0209166_101060183	3300027857	Surface Soil	TTVTFRGEFRVTGGAGQAGLFFRVMRPADLHGPVTAAQALADPANHVVTVEGDWSPHEVTATVPADTNTVGFGVFLAGPGRIELRAAELTTKN
Ga0209006_103047763	3300027908	Forest Soil	QPEGFAYLVQEIFADDYRGTTVTFRGEFRVTGGAGQAGLFVRVMRPADLHGPVTAAQALADPANHVVTVEGDGEWTGYEVTATVPADANTVAFGVFLAGPGRIELRAAELTTEN
Ga0308309_111942502	3300028906	Soil	QFRTPEGAGRAGLFLRVMQPRDARGPLTAKAALADPANHIVTLEGPGDWTTHEVTAPIPDDANTVAFGVFLAGPGRIELRDPELTRAGRAY
Ga0310037_101268722	3300030494	Peatlands Soil	DDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKPRDVRGPFTAEAALADPANHVVTIENHADWTTHEVTAPIPDDTNTIAFGVFLAGPGRIELRDTRLTRTGLAD
Ga0311356_114096661	3300030617	Palsa	EGFAWLAQEVFADDYRGTTVTFRGQFRTLETTGRAGLFLRVMKSPAVHGPFTAQGALADPSNHVVTIANHTDWSTGEVTAPIPADTDAIAFGIFLAGPGRIDLRDPELTPGGVA
Ga0310039_103307321	3300030706	Peatlands Soil	RAGLFLRVMKPQHVHGPFTAEAALADPANHVVTIENHADWTTHQVTAPIPDDTNTIAFGVFLACPGRIELRGTRLTRTGLAD
Ga0302311_107404692	3300030739	Palsa	ETTGRAGLFLRVMKSPAVHGPFTAQGALADPSNHVVTIANHTDWSTGEVTAPIPADTDAIAFGIFLAGPGRIDLRDPELTPGGVA
Ga0265746_10528081	3300030815	Soil	DDYRGTTVTFRGRFRTPATTGRTGLFLRVMKQPTGHGPFTALGALADPSNHIVTIANHADWSSHEVTAPIPHQADTIAFGVFLAGPGRIDLRDPELIPAEPA
Ga0318516_108688381	3300031543	Soil	EIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPFTAETALADLANHVVTIEGHANWATNEVTAPIPDETNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318538_102090992	3300031546	Soil	PDTTGRAGLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTRAGLDMMRGPA
Ga0310915_101503432	3300031573	Soil	LFRIPNTTGRAGLFLRVMRPQDVRGPFTAEAALADPANHVVTIEGHADWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318555_106870391	3300031640	Soil	PQPEGFAWLAQEIFADDYRGTTVTFRGQFRAPDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318560_107063162	3300031682	Soil	PDGFAWLAQEIFADDYLGTTVTFRGQFRTPDTTGRAGLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTRAGLDMMRGP
Ga0310686_1017820412	3300031708	Soil	SAAVPQPEGFAWLAQEIFADDYRGAAVTLRGQFRAPRGAGRAGLFLRVMKPRDLKGPFTAQAALADPANHIVTVEGPGDWTTYEVTAPVPDDANTVAFGVFLVGPGRIELRTPWLTIEN
Ga0310686_1064960943	3300031708	Soil	RGAVVTFRGQFRIPEDAGRAGLFLRVMKPRDLRGPFTAQAALADPANRIVTFEGSGDWTTQEVTAPVPDDANTVAFGIFLAGPGRIELRDPELTTEN
Ga0310686_1145401696	3300031708	Soil	DYRGAAVTFRGQFRTPEGTGIAGLFLRVMKPRDLHGPFTAQAALADPANHIVTLEGPGDWTTHEVTAPIPDDANTVAFGLFLAGPGRIELRDPQLTRAGLAY
Ga0318496_102717052	3300031713	Soil	GLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTRAGLDMMRGPA
Ga0307476_112138812	3300031715	Hardwood Forest Soil	GTTVAFRGEFRATGGAGQAGLFVRVMRPADLHGPMTAAQALADPANHVVTVAGHEQAWSAREVTAPVPEDTNTVAFGVFLVGPGRIELRDPQLTMEN
Ga0307476_113585441	3300031715	Hardwood Forest Soil	GEFRVTGGAGQAGLFVRVMRPADLRGPMTVAQALADPANHVVTVPGRDDWTAREVTAPVPDDTNTVAFGMFLVGPGRIEARDPELTIEN
Ga0307474_102584541	3300031718	Hardwood Forest Soil	QFRAPAGAGRAGLFLRVMKPRDLRGPFTARAALADPANRIVTLEGPGDWTTHEVTAPVPDDANTVAFGVFLVGPGQIELRTPELTIEN
Ga0318493_107896201	3300031723	Soil	PDTTGRAGLFLRVMQPQDVRGPFTAEAALADPASHVVNIEGHADWTTHEATAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318500_100219641	3300031724	Soil	LAAAVPRPEGFAWLAQEIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318501_101430312	3300031736	Soil	DYRGTTVTFRGQFRTPDTTGRAGLFLRVMQPQDVRGPFTAEAALADPASHVVNIEGHADWTTHEATAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318502_102168911	3300031747	Soil	PDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318492_107199421	3300031748	Soil	KLHTPACTGLSGLFLRVMEPRDQHAPSTAQAALADPANHIVTPEGSCDWTTYEVTAPIPDDTDTIAFGVFLAGPGRIELCALEFARDQGAGSGS
Ga0307475_113438811	3300031754	Hardwood Forest Soil	RVATVTFRGQFRAPAGAGRAGLFLRVMKPRDLRGPFTARAALADPANRIVTLEGPGDWTTHEVTAPVPDDANTVAFGVFLVGPGQIELRTPELTIEN
Ga0318535_101127592	3300031764	Soil	AEQAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318509_108316771	3300031768	Soil	QEIFADDYRGTTVTFRGQFRAPDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318546_100970921	3300031771	Soil	SDTTGRAGLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTGLDST
Ga0318546_110042541	3300031771	Soil	RGTTVTFRGQFRAPDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318552_104689551	3300031782	Soil	APDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318503_101029632	3300031794	Soil	DDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPFTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318503_102145622	3300031794	Soil	CGTGRAGLFLRVMQPQDVRGPFTAEAALADPASHVVNIEGHADWTTHEATAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318557_100914882	3300031795	Soil	YRGQVRTSDTTGRAGLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTGLDST
Ga0318550_104926981	3300031797	Soil	RPEGFAWLAQEIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318497_108663202	3300031805	Soil	RGAAVTFRGQFRTPDTTGRAGLFLRVMKPRDDHGPFTAEAALADPGNHIVTVANGADWTAYEVTAPISDDTNTVAFGVFLAGPGRIELRTPELTRRV
Ga0318568_102824421	3300031819	Soil	LVLRVMKPRDLRGPFTAQAALADPANHIVTLEAPGDWTTHQVIAPIPDDANTVAFGLFLAGPGQIELRNPELTRVDLALLAAPVLGSPAACDPPPLMPRF
Ga0307478_112657411	3300031823	Hardwood Forest Soil	DDYRGTTITFRGKLRAPGTTGRTGLFLRVMNPPTVHGPFTAQAAVADPSNHIVTIANQADWSTHEVTAPIPHHADTIAFGVFLAGPGRIDLRDPELIPAGPAHVEDRSVEP
Ga0307478_115025911	3300031823	Hardwood Forest Soil	FADDYRGATVTFRGQFRAPEGAGRAGLFLRVMKPRDLHGPFTAQAALADPANHIVTLEGPGDWSAHEVTAPVPDDANTVAFGVFLVGPGRIELRTPQLTIEN
Ga0318564_101808002	3300031831	Soil	PDTTGRAGLFLRVMKPRDAHGPVTAETALADPGNRIVTVASHGDWTAHEISAPIPDDTNTVAFGIFLAGPGRIELRSPALTRRA
Ga0310917_102035132	3300031833	Soil	YRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318512_105044182	3300031846	Soil	AALAAAVPRPEGFAWLAQEIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPFTAETALADLANHVVTIEGHANWTTNEVTAPIPDETNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318512_105478901	3300031846	Soil	MGSRVMRPRDVRGPFTAEAALADPGNHIVAIANPAEWTAHEVTAPIPDDTNTIAFGVFLAGPGRIELRAPELTRAGLDMMRGPA
Ga0318544_103600231	3300031880	Soil	PDTTGRAGLFLRVMRPQDVRGPFTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318520_102119562	3300031897	Soil	DTTGRAGLFLRVMQPQDVRGPFTAEAALADPASHVVNIEGHADWTTHEATAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0306921_110054372	3300031912	Soil	FRTPDTTGRAGLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTRAGLDMMRGPA
Ga0306921_114202062	3300031912	Soil	FADDYRGAAVTFRGLFRIPNTTGRAGLFLRVMRPQDVRGPFTAEAALADPANHVVTIEGHADWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAN
Ga0306921_121527752	3300031912	Soil	GADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318530_103163772	3300031959	Soil	AWLAQEIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318531_102346921	3300031981	Soil	VTFRGQFRAPDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318556_100273943	3300032043	Soil	DTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHADWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318506_104175721	3300032052	Soil	FRTPDTTGRAGLFLRVMRPRDVRGPFTAEAALADPGNHIVAIANPAEWTAHEVTAPIPDDTNTIAFGVFLAGPGRIELRAPELTRAGLDMMRGPA
Ga0318575_100822712	3300032055	Soil	AALAAAVPRPEGFAWLAQEIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318513_100255423	3300032065	Soil	TFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318514_106690492	3300032066	Soil	VPQPEGFAWLAQEIFADDYRGTTVTFRGQFRAPDTTGRAGLFLRVMQPRDARGPVTAEAALADPRNQIVTIANPADWTTHEVTAPIPDDMNTVAFGVFLAGPGRIELRAPELTRAGLGMIRGPA
Ga0318524_100716901	3300032067	Soil	LFLRVMKPRDAHGPVTAETALADPGNRIVTVASHGDWTAYEISAPIPDDTNTVAFGIFLAGPGRIELRSPALTRRA
Ga0318524_102435792	3300032067	Soil	GRAGLFLRVMRPRDVRGPFTAEAALADPWNHIVAIANPAEWTAHEVTASIPDDTNTIAFGVFLAGPGRIELRAPELTGLDST
Ga0318524_103913211	3300032067	Soil	AVTFRGQFRTPDATGRAGLFLRVMKPRDLHGPFTTQAALADPANHIVTLEAPSDWTTHEVTAPIPADASTVAFGLFLAGPGQIELRDPELTRDGPALLAT
Ga0318553_100351411	3300032068	Soil	WLAQEIFADDYRGAAVTFRGLFRTPDTTGRAGLFLRVMRPQDVRGPVTAETALADLANHVVTIEGHANWTTNEVTAPIPDDTNTVAFGVFLAGPGRIELRDPELSRTGLAD
Ga0318525_100417251	3300032089	Soil	DYRGTAVTFRGQFRTPDATGRAGLFLRVMKPRDLHGPFTTQAALADPANHIVTLEAPSDWTTHEVTAPIPADASTVAFGLFLAGPGQIELRDPELTRDGPALLAT
Ga0311301_100949451	3300032160	Peatlands Soil	AWLAQEIYADDYRGAAVTFRGQFRAPDTTGRAGLFLRVMKPRDVRGPFTAEAALADPANHVVTIENHADWTTHEVTAPIPDDTNTIAFGVFLAGPGRIELRDTRLTRTGLAD
Ga0311301_105783721	3300032160	Peatlands Soil	EGFAWLAQEIFADDYRGATVTFRGQFRTPEGTGPAGLFLRVMKPRDLHGPFTAQAALADPANHIVTLEGPGDWTTYEVIAPIPDDANTVAFGLFLVGPGRIELRDPELTRAGLAY
Ga0307472_1003614371	3300032205	Hardwood Forest Soil	SAAVPKPAGFAWLAQEIFADDYRGAAVTFRGQVSTPQGTGRAGLFLRVMNPQDVHGPFTAEAALADPANHVVTLEGPGDWSTHEVTAPIPDDTNTIAFGVFLAGPGRIELHDLGLTRTGLAD
Ga0348332_100362002	3300032515	Plant Litter	VLSSAVPQPEGFAWLAQEIFADDYRGTTVTFRGQFRAPDTTGRAGLFLRVMKPRDLHGPFTAQAALADPANHIVTLEGPGDWTSHEVTAPIPDDTNTIAFGVFLPGPGRIELRNPELTRAGLAY
Ga0335082_101203655	3300032782	Soil	GRAGLFLRVMKPQDLHGPFTAQAALADPANHIVTIAGHADWTRHEVTAPIPDDTNTIAFGVFLAGPGRIQLRDPELTRAGLAAGCGGGRALSAGPRAQ
Ga0318519_106007911	3300033290	Soil	YRGTAVTFRGQFRTPDATGRAGLFLRVMKPRDLRGPFTAQAALADPANHIVTLEAPGDWTTHQVIAPIPDDANTVAFGLFLAGPGQIELRNPELTRVDLALLAAPVLGSPAACDPPPLMPRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences