Metagenome / Metatranscriptome Family F065950

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065950
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	53 residues
Representative Sequence	GACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV
Number of Associated Samples	111
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.79 %
% of genes near scaffold ends (potentially truncated)	94.49 %
% of genes from short scaffolds (< 2000 bps)	97.64 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.906 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.811 % of family members)
Environment Ontology (ENVO)	Unclassified (25.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.819 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.11% β-sheet: 18.42% Coil/Unstructured: 64.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01872	RibD_C	29.92
PF02627	CMD	3.94
PF01636	APH	3.15
PF13649	Methyltransf_25	3.15
PF00498	FHA	2.36
PF14690	zf-ISL3	1.57
PF04978	DUF664	1.57
PF01070	FMN_dh	1.57
PF13936	HTH_38	0.79
PF12833	HTH_18	0.79
PF02687	FtsX	0.79
PF14206	Cys_rich_CPCC	0.79
PF12850	Metallophos_2	0.79
PF09537	DUF2383	0.79
PF01047	MarR	0.79
PF00782	DSPc	0.79
PF00326	Peptidase_S9	0.79
PF12867	DinB_2	0.79
PF03466	LysR_substrate	0.79
PF13358	DDE_3	0.79
PF06475	Glycolipid_bind	0.79
PF00464	SHMT	0.79
PF13701	DDE_Tnp_1_4	0.79
PF13565	HTH_32	0.79
PF08922	DUF1905	0.79
PF02768	DNA_pol3_beta_3	0.79
PF12680	SnoaL_2	0.79
PF12802	MarR_2	0.79
PF01557	FAA_hydrolase	0.79
PF00106	adh_short	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	29.92
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	29.92
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	3.94
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	3.94
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.57
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.57
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.79
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.79
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.79
COG3554	Uncharacterized conserved protein	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.91 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.91 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.91 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.36 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.32 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.36 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.36 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.57 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.57 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.79 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.79 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Plantactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora	1.57 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.57 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.79 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	0.79 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.79 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Plantactinospora alkalitolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → Plantactinospora alkalitolerans	1.57 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.79 %
Virgisporangium aurantiacum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aurantiacum	0.79 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.79 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.79 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.79 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Plantactinospora alkalitolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → Plantactinospora alkalitolerans	1.57 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.79 %
Virgisporangium aurantiacum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aurantiacum	0.79 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.79 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.79 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.79 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01DRTN9	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300000956\|JGI10216J12902_101164860	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300004463\|Ga0063356_103639644	Not Available	664	Open in IMG/M
3300004480\|Ga0062592_101616294	Not Available	627	Open in IMG/M
3300005093\|Ga0062594_101572664	Not Available	679	Open in IMG/M
3300005329\|Ga0070683_101594472	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300005330\|Ga0070690_100153265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1574	Open in IMG/M
3300005334\|Ga0068869_101250540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300005344\|Ga0070661_101678237	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005435\|Ga0070714_102003481	Not Available	565	Open in IMG/M
3300005466\|Ga0070685_11016327	Not Available	623	Open in IMG/M
3300005468\|Ga0070707_100255383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1705	Open in IMG/M
3300005537\|Ga0070730_10550781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	738	Open in IMG/M
3300005537\|Ga0070730_10805918	Not Available	591	Open in IMG/M
3300005548\|Ga0070665_102546805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300005578\|Ga0068854_100212216	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005713\|Ga0066905_101574332	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005985\|Ga0081539_10221199	Not Available	861	Open in IMG/M
3300006048\|Ga0075363_100683978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300006178\|Ga0075367_10144656	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300006186\|Ga0075369_10326679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	718	Open in IMG/M
3300006575\|Ga0074053_11820129	Not Available	708	Open in IMG/M
3300006581\|Ga0074048_10069132	Not Available	628	Open in IMG/M
3300006606\|Ga0074062_13006248	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006755\|Ga0079222_11807435	Not Available	591	Open in IMG/M
3300006800\|Ga0066660_11096757	Not Available	631	Open in IMG/M
3300006844\|Ga0075428_100401816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1468	Open in IMG/M
3300006845\|Ga0075421_101263898	Not Available	819	Open in IMG/M
3300006847\|Ga0075431_100437390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1305	Open in IMG/M
3300006852\|Ga0075433_11295061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300006853\|Ga0075420_100269201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1479	Open in IMG/M
3300006880\|Ga0075429_101368851	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300009012\|Ga0066710_102510646	Not Available	745	Open in IMG/M
3300009094\|Ga0111539_10390466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1621	Open in IMG/M
3300009094\|Ga0111539_12708545	Not Available	575	Open in IMG/M
3300009101\|Ga0105247_10324241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300009101\|Ga0105247_11299150	Not Available	584	Open in IMG/M
3300009148\|Ga0105243_11690477	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009162\|Ga0075423_11795459	Not Available	661	Open in IMG/M
3300009174\|Ga0105241_11560435	Not Available	637	Open in IMG/M
3300009176\|Ga0105242_11801966	Not Available	650	Open in IMG/M
3300009551\|Ga0105238_11671425	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009551\|Ga0105238_12099206	Not Available	599	Open in IMG/M
3300009610\|Ga0105340_1143140	Not Available	983	Open in IMG/M
3300009610\|Ga0105340_1377754	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300009789\|Ga0126307_10613038	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300009792\|Ga0126374_10290167	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300009840\|Ga0126313_11515432	Not Available	557	Open in IMG/M
3300010036\|Ga0126305_10650677	Not Available	711	Open in IMG/M
3300010037\|Ga0126304_10662129	Not Available	705	Open in IMG/M
3300010039\|Ga0126309_10877615	Not Available	592	Open in IMG/M
3300010039\|Ga0126309_11252141	Not Available	512	Open in IMG/M
3300010041\|Ga0126312_11439149	Not Available	511	Open in IMG/M
3300010042\|Ga0126314_10178526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300010045\|Ga0126311_10869882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300010048\|Ga0126373_11762104	Not Available	683	Open in IMG/M
3300010326\|Ga0134065_10320479	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010362\|Ga0126377_12274023	Not Available	618	Open in IMG/M
3300010366\|Ga0126379_13360570	Not Available	536	Open in IMG/M
3300010376\|Ga0126381_100538056	Not Available	1653	Open in IMG/M
3300010376\|Ga0126381_104400263	Not Available	545	Open in IMG/M
3300010399\|Ga0134127_10992039	Not Available	899	Open in IMG/M
3300010399\|Ga0134127_11762019	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010399\|Ga0134127_11990098	All Organisms → cellular organisms → Bacteria → Terrabacteria group	659	Open in IMG/M
3300011415\|Ga0137325_1088502	Not Available	694	Open in IMG/M
3300012021\|Ga0120192_10031303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	883	Open in IMG/M
3300012915\|Ga0157302_10441954	Not Available	547	Open in IMG/M
3300012955\|Ga0164298_10912475	Not Available	640	Open in IMG/M
3300012971\|Ga0126369_13095555	Not Available	545	Open in IMG/M
3300012985\|Ga0164308_11149734	Not Available	698	Open in IMG/M
3300012986\|Ga0164304_11427844	Not Available	569	Open in IMG/M
3300013296\|Ga0157374_12124578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium aurantiacum	588	Open in IMG/M
3300013297\|Ga0157378_12041194	Not Available	624	Open in IMG/M
3300013306\|Ga0163162_11991923	Not Available	665	Open in IMG/M
3300013308\|Ga0157375_12620081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300014296\|Ga0075344_1058732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	710	Open in IMG/M
3300014325\|Ga0163163_11822853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	669	Open in IMG/M
3300014326\|Ga0157380_12911857	Not Available	545	Open in IMG/M
3300014868\|Ga0180088_1026458	Not Available	934	Open in IMG/M
3300015371\|Ga0132258_10303359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3929	Open in IMG/M
3300015372\|Ga0132256_103334933	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300015373\|Ga0132257_102241320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300015373\|Ga0132257_103768509	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300015373\|Ga0132257_104477327	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300016357\|Ga0182032_11093875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → Plantactinospora alkalitolerans	683	Open in IMG/M
3300017944\|Ga0187786_10335454	All Organisms → cellular organisms → Bacteria → Terrabacteria group	633	Open in IMG/M
3300018429\|Ga0190272_11654827	Not Available	660	Open in IMG/M
3300018432\|Ga0190275_11422283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300018432\|Ga0190275_12449676	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300018469\|Ga0190270_11047765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	845	Open in IMG/M
3300018476\|Ga0190274_12416995	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300018481\|Ga0190271_10853324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1035	Open in IMG/M
3300018481\|Ga0190271_13231155	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018481\|Ga0190271_13476545	Not Available	527	Open in IMG/M
3300018481\|Ga0190271_13597500	Not Available	519	Open in IMG/M
3300018920\|Ga0190273_12369167	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300021362\|Ga0213882_10036411	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300021560\|Ga0126371_12281682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300025791\|Ga0210115_1106595	Not Available	563	Open in IMG/M
3300025901\|Ga0207688_10422402	Not Available	829	Open in IMG/M
3300025922\|Ga0207646_11584991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300025927\|Ga0207687_10444802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1074	Open in IMG/M
3300025928\|Ga0207700_11624731	Not Available	571	Open in IMG/M
3300026023\|Ga0207677_11083579	Not Available	730	Open in IMG/M
3300026035\|Ga0207703_10986377	Not Available	808	Open in IMG/M
3300026035\|Ga0207703_11518470	Not Available	644	Open in IMG/M
3300026088\|Ga0207641_12312016	Not Available	537	Open in IMG/M
3300026116\|Ga0207674_11405931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	667	Open in IMG/M
3300027866\|Ga0209813_10392311	Not Available	558	Open in IMG/M
3300027880\|Ga0209481_10076655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1588	Open in IMG/M
3300027886\|Ga0209486_10734876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300028592\|Ga0247822_11743950	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028802\|Ga0307503_10002390	All Organisms → cellular organisms → Bacteria	4495	Open in IMG/M
3300031744\|Ga0306918_10343090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1158	Open in IMG/M
3300031747\|Ga0318502_10668324	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031771\|Ga0318546_10447268	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031781\|Ga0318547_10379818	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300031902\|Ga0302322_103525119	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031912\|Ga0306921_10840353	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300031913\|Ga0310891_10098939	Not Available	894	Open in IMG/M
3300031941\|Ga0310912_10059993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2704	Open in IMG/M
3300031954\|Ga0306926_12545812	Not Available	560	Open in IMG/M
3300032065\|Ga0318513_10109657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → Plantactinospora alkalitolerans	1297	Open in IMG/M
3300032076\|Ga0306924_11234859	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300032211\|Ga0310896_10791431	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300033550\|Ga0247829_10943191	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300034114\|Ga0364938_026861	Not Available	912	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.57%
Host-Associated	Host-Associated	35.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.63%
Plants	Host-Associated → Plants	35.43%
Aquatic	Environmental → Aquatic	3.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.81%
Sediment	Environmental → Aquatic → Sediment	3.15%
Roots	Host-Associated → Plants → Roots	3.94%
Marine	Environmental → Aquatic → Marine	0.79%
Peat	Environmental → Terrestrial → Peat	0.79%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.79%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.66%
Loam	Environmental → Terrestrial → Soil → Loam	6.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.15%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.57%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.30%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.15%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.15%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.79%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_00639180	2189573000	Grass Soil	YDWLTTGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGAAAAAGV
JGI10216J12902_1011648601	3300000956	Soil	RPVPGESYDWLATGACMANPGAVCGNPRDPASWWLMVDIDARVLRWHRREFESGAAGAAGV*
Ga0063356_1036396442	3300004463	Arabidopsis Thaliana Rhizosphere	CMANPGAVCGNPRDAASWWLLVDIDARVLRWHRKEFESGEAAAAGV*
Ga0062592_1016162942	3300004480	Soil	ATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFEPGEAAAAGV*
Ga0062594_1015726641	3300005093	Soil	ACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKDFESEDGAGSSGRLL*
Ga0070683_1015944722	3300005329	Corn Rhizosphere	GAFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0070690_1001532653	3300005330	Switchgrass Rhizosphere	AYDGAATRAVRPAPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDVDARVLRWNRNEFESRGSCPSSA*
Ga0068869_1012505401	3300005334	Miscanthus Rhizosphere	GAVCGNPRDAASWWLIVDIDARVLQWHRKEFGSEGAAAAGL*
Ga0070661_1016782371	3300005344	Corn Rhizosphere	AVRPVPGESYDWFATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRSEFESEEGAAAGM*
Ga0070714_1020034812	3300005435	Agricultural Soil	ACMANPGAVCGNPRDAASWWLVVDIDARVIRWHRKAFGGEEAAAACL*
Ga0070685_110163272	3300005466	Switchgrass Rhizosphere	VPDESYDWLATGACMANPGAVCGNPRDPASWWLIVDVDARVLRWNRDEFESA*
Ga0070707_1002553831	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ATRAVRPVPGESYDWLATGAFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0070730_105507811	3300005537	Surface Soil	DGAATRAVRPVPGESYDWLATGAFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRQTFGTEEAAAACL*
Ga0070730_108059183	3300005537	Surface Soil	GAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0070665_1025468051	3300005548	Switchgrass Rhizosphere	GESYDWLATGACMANPGAVCGNPRDAASWWLVVDVDARVLRWHRSEFESGDAGPAGV*
Ga0068854_1002122161	3300005578	Corn Rhizosphere	VCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAVCL*
Ga0066905_1015743321	3300005713	Tropical Forest Soil	ESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARLLRWHRMEFDSREAAAAGV*
Ga0081539_102211991	3300005985	Tabebuia Heterophylla Rhizosphere	PVPGESYDWLATGAFMANPGAVCGNPRDAASWWLIVDIDARLMRWHRKTFGTEEAAAARL
Ga0075363_1006839781	3300006048	Populus Endosphere	PGAVCGNPRDAASWWLIVDIDARVLRWQRKEFETEEAASAGL*
Ga0075367_101446563	3300006178	Populus Endosphere	NPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAGAAGV*
Ga0075369_103266791	3300006186	Populus Endosphere	SYDWLATGACMANPGAVCGNPRDAASWWLIVDVDTRELRWNRNEFESTDDSHSGP*
Ga0074053_118201291	3300006575	Soil	DGAATRAVRPVPGESYDWLATSACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV*
Ga0074048_100691321	3300006581	Soil	GACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV*
Ga0074062_130062482	3300006606	Soil	GACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFGSGVAAVAGL*
Ga0079222_118074351	3300006755	Agricultural Soil	ESYDWLATGAFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTKEAAAGCL*
Ga0066660_110967572	3300006800	Soil	CMANAGAVCGNPRDAASWWLVVDIDARVLRWHRKVFGSEEAAAAGL*
Ga0075428_1004018163	3300006844	Populus Rhizosphere	PGESYDWLATGACMANPGAVCGNPRDAASWWLIVDTDARVLRWHRKEFESEEAAAAGL*
Ga0075421_1012638981	3300006845	Populus Rhizosphere	DWLATGACMANPGAVCGNPRDAASWWLIVDTDARALRWHRKKFESREAAAAGV*
Ga0075431_1004373902	3300006847	Populus Rhizosphere	ANPGAVCGNPRDAASWWLIVDIDARALRWHRKKFESREAAAAGV*
Ga0075433_112950612	3300006852	Populus Rhizosphere	MANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0075420_1002692011	3300006853	Populus Rhizosphere	RAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDTDARVLRWHRKEFESEEAAAAGL*
Ga0075429_1013688511	3300006880	Populus Rhizosphere	VPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARALRWHRKEFESGEAAAAGV*
Ga0066710_1025106462	3300009012	Grasslands Soil	DGAATRAVRPVPGESYDWLATGACMANSGAVCGNPRDGASWWLIVDIDARVLRWHRKEFGSEEAADAGL
Ga0111539_103904661	3300009094	Populus Rhizosphere	NPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESEGAAAAGL*
Ga0111539_127085451	3300009094	Populus Rhizosphere	AFMANPGAVCGNPRDAASWWLVVDIDARVMRWHRKTFGSEEAAAACL*
Ga0105247_103242411	3300009101	Switchgrass Rhizosphere	TRAVRPAPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDVDARVLRWNRNEFESRGSCPSSA*
Ga0105247_112991501	3300009101	Switchgrass Rhizosphere	AYDGATTSTVQPIPNEPYDWLATGACMANPGAVCGNPRDTASWWLIVDVDARVLRWNRNEFESKDAAPTGA*
Ga0105243_116904772	3300009148	Miscanthus Rhizosphere	ANPGAVCGNPRDAASWWLIVDVDARVLRWHRSEFESGEAAAAGV*
Ga0075423_117954591	3300009162	Populus Rhizosphere	RAVRPVPGESYHWLATGAFMANPGAVCGNPRDAASWWLIVDIDARLMRWHRKTFGSEEAAATCL*
Ga0105241_115604351	3300009174	Corn Rhizosphere	RDAASWWLIVDTDARVLRWHREEFEPGEAAAAGV*
Ga0105242_118019661	3300009176	Miscanthus Rhizosphere	ATGACMANPGAVCGNPRDAASWWLVVDTDARVLRWHREEFESGEAAAAGV*
Ga0105238_116714252	3300009551	Corn Rhizosphere	RDAASWWLIVDIDARVLRWHRNELESGRAAAAGG*
Ga0105238_120992061	3300009551	Corn Rhizosphere	MANPGAVCGNPRGAASWWLIVDIDARELRWQRKEFESGRAAAAGV*
Ga0105340_11431401	3300009610	Soil	GAATRAMRPVPGESYDWLAAGACMANPGAVCGNPRDAASWWLIVDIDARVLRWQRNEFGSEEAAAAGL*
Ga0105340_13777542	3300009610	Soil	GAATRAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLR*
Ga0126307_106130382	3300009789	Serpentine Soil	MANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV*
Ga0126374_102901671	3300009792	Tropical Forest Soil	NPRDAASWWLIVDIDARVMRWYRKTFGTEEAAAARL*
Ga0126313_115154321	3300009840	Serpentine Soil	GACMANPGAVCGNPRDAASWWLLVDIDARVLRWHRKEFESGEAAAVGV*
Ga0126305_106506772	3300010036	Serpentine Soil	VRPVPGDSYDWLATGACMANRGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV*
Ga0126304_106621292	3300010037	Serpentine Soil	TRAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV*
Ga0126309_108776151	3300010039	Serpentine Soil	VPGKSYDWAATGAGIANPGAVCGNPRDAASWWLLVDIDARVLRWHRSEFESGDAAGV*
Ga0126309_112521411	3300010039	Serpentine Soil	ATTHALRPVPGESYDWLGTGACMANPGAVCGNPRDAASWWLIVDTDARVLRWQREEP*
Ga0126312_114391492	3300010041	Serpentine Soil	GNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV*
Ga0126314_101785261	3300010042	Serpentine Soil	ACMANPGAVCGNPRDAASWWLIIDIDARVLVWHRKDFESGEAGATGV*
Ga0126311_108698821	3300010045	Serpentine Soil	PGESYDWLGTSACMANPGAVCGNPRDAASWWLIVDIDARVLRWQREDL*
Ga0126373_117621042	3300010048	Tropical Forest Soil	EPALFTYETGATRAVRPVPGETYNWLETTACLANPGAVCGNPRDAAAWWLVVDTKGRTLRWHRDED*
Ga0134065_103204791	3300010326	Grasslands Soil	LERRDGDRGRDGTRAVRPVPGESYEWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWQREEL*
Ga0126377_122740231	3300010362	Tropical Forest Soil	ATRSVRPVPGESYSWLATGACMANPGAVCGNPRDSASWWLVVDIDKRVLRWHRNELELGEAG*
Ga0126379_133605702	3300010366	Tropical Forest Soil	PGECYEWLATGPCMANPGAVCGNPRDAATWWLIVDVDTRVLRWHRKEFGSEEAEDARP*
Ga0126381_1005380562	3300010376	Tropical Forest Soil	RDAASWWLIVDIEARVMRWQRKTFGTEEAAAACL*
Ga0126381_1044002631	3300010376	Tropical Forest Soil	DWLATGAYMANPGAVCGNPRDAASWWLVVDLDARAMRWHRKTFGTEAAAAACV*
Ga0134127_109920391	3300010399	Terrestrial Soil	ACMANPGAVCGNPRDAASWWLVVDTDARVLRWHREEFESGEAAAAGV*
Ga0134127_117620191	3300010399	Terrestrial Soil	DGAATRAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRSEFESEEAAAAGM*
Ga0134127_119900981	3300010399	Terrestrial Soil	GESYDWPATGACMANPGAVCGNPRDAASWWLMVDIDARVLRWHRKEFGSEEAAAAGSSAQDGDTKMR*
Ga0137325_10885021	3300011415	Soil	ESYDWLATGACMANPGAVCGNPRDAASWWLIVDVDARVLQWHRHEFESGEAAAAGV*
Ga0120192_100313032	3300012021	Terrestrial	ANPGAVCGNPRDAATWWLIVDTDARVLRWHRKEFKSEEAAAAGL*
Ga0157302_104419541	3300012915	Soil	RDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0164298_109124751	3300012955	Soil	ESYDWLATGAAMANPGAVCGNPRDAASWWLIVDIDARELRWQRKEFESGRAAAAGV*
Ga0126369_130955552	3300012971	Tropical Forest Soil	VRPVPGQSYDWLATGACMANPGAICGNPRDAASWWLVVDIDARVLRWHRKEFESREAAAAGQRRRDDHVEP*
Ga0164308_111497342	3300012985	Soil	RDAASWWLIVDIDARVLRWHRNEFEPGQAGAAGV*
Ga0164304_114278442	3300012986	Soil	GAVCGNPRDAASWWLIVDIDARELRWQRKEFESGRAAAAGV*
Ga0157374_121245782	3300013296	Miscanthus Rhizosphere	ATGAFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGSEEAAAACL*
Ga0157378_120411941	3300013297	Miscanthus Rhizosphere	AVRPVPGESYDWRTTGACMANPGAVCGNPRDEASWWLLVDIDARVLRWHRKEFESGEAAAAGV*
Ga0163162_119919232	3300013306	Switchgrass Rhizosphere	ANPGAVCGNPRDAASWWLIVDIDARELRWQRKEFESGRAAAAGV*
Ga0157375_126200812	3300013308	Miscanthus Rhizosphere	GAATRAVRPVPDESYDWLATGACMANPGAVCGNPRDAASWWLVVDVDARVLRWHRSEFESGDAGPAGV*
Ga0075344_10587322	3300014296	Natural And Restored Wetlands	VSPYDWPATGACMANPGAVCGNPRDAASWWLIVDTDARVLRWHRKEFESGEAAAAGV*
Ga0163163_118228533	3300014325	Switchgrass Rhizosphere	CGNPRDAASWWLIVDIDARVLRWHRKEFESGDAAAAGV*
Ga0157380_129118571	3300014326	Switchgrass Rhizosphere	GKSYDWLATGACMANPGAVCGNPRDPASWWLIVDIDARVLRWHRKEFGSEETAAAGL*
Ga0180088_10264582	3300014868	Soil	YDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAGAAGA*
Ga0132258_103033591	3300015371	Arabidopsis Rhizosphere	NPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0132256_1033349332	3300015372	Arabidopsis Rhizosphere	WLATGACMANPGAVCGNPRDAASWWLIVDIDARELRWQRKEFESGRAAAAGV*
Ga0132257_1022413202	3300015373	Arabidopsis Rhizosphere	ATGAFMANPGAICGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL*
Ga0132257_1037685092	3300015373	Arabidopsis Rhizosphere	GWLATGAFMANPGAVCGNPRDAASWWLFVDIDARVLRWHRKEFESGQAAAAGV*
Ga0132257_1044773271	3300015373	Arabidopsis Rhizosphere	GACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRNEFGSAGTAAAGL*
Ga0182032_110938752	3300016357	Soil	VRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGGAGAAGV
Ga0187786_103354542	3300017944	Tropical Peatland	AYDGAATHALRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDLRVLRWHRKEFGCE
Ga0190272_116548271	3300018429	Soil	ACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGQARTAGV
Ga0190275_114222832	3300018432	Soil	RPVPGESYDWPATGACMANPGAVCGNPRDAASWWLVVDVDARVLRWHRQDFQSAGAAAPD
Ga0190275_124496761	3300018432	Soil	TTCAVRPVPGESCDWHGTRACMANPGAVCGDPSDAASWWLLVDIDARVLRWQREELRPMAIL
Ga0190270_110477651	3300018469	Soil	MANPGAVCGNPRDAASWWLLVDIDARVLRWHRKAFKSGEAARAGL
Ga0190274_124169952	3300018476	Soil	CGNPRDAASWWLLVDIDARVLRWHRSEFESEEAAAAGM
Ga0190271_108533241	3300018481	Soil	RPVPGESYDWPATGAWMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKAFDSREAAGAG
Ga0190271_132311551	3300018481	Soil	TRAVRPVPGESYDWLALGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRNEFESGEAAAAGV
Ga0190271_134765451	3300018481	Soil	GACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRNEFESGEAAAAGL
Ga0190271_135975001	3300018481	Soil	ATRAVRPVPGESYDWPATGAWMANPGAVCGNPRDGASWWLIVDIDARVLRWHRKEFESGEAAAAGV
Ga0190273_123691672	3300018920	Soil	GVGTRAVRPVPGESYDWLATGACIANPGAVCGNPRDPASWWLIVEIDARVLRWHRKEFESGEAGAAGV
Ga0213882_100364113	3300021362	Exposed Rock	PGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGAEEAASACL
Ga0126371_122816821	3300021560	Tropical Forest Soil	PALFTYETGATRAVRPVPGETYNWLETAACLANPGAVCGNPRDAAAWWLVVDTKGRTLRWHRDED
Ga0210115_11065951	3300025791	Natural And Restored Wetlands	NACLANPGAVCGNPRDAASWWLIVDTDSRVLRWHRKEFESAEAADAGV
Ga0207688_104224022	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	ESYDWVATGACMANPGAVCGNPRDAASWWLIVDVDARVLRWNRDEFESA
Ga0207646_115849911	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GVFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL
Ga0207687_104448021	3300025927	Miscanthus Rhizosphere	AYDGATTRAVRPVPGESYDWLGTGACMANPGAVCGNPRDAASWWLIVDIDARVLRWQREE
Ga0207700_116247312	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ATRACMANPGAVCGNPRDAASWWLVVDIDARVIRWHRKAFGGEEAAAACL
Ga0207677_110835792	3300026023	Miscanthus Rhizosphere	DWLATGACMANPGAVCGNPRDPASWWLIVDVDARVLRWNRDEFESA
Ga0207703_109863772	3300026035	Switchgrass Rhizosphere	VRPVPGESYDWLATGAAMANPGAVCGNPRDAASWWLIVDIDARELRWQRKEFESGRAAAAGV
Ga0207703_115184702	3300026035	Switchgrass Rhizosphere	ANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGSEEAAAACL
Ga0207641_123120161	3300026088	Switchgrass Rhizosphere	LATGAFMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGSEEAAAACL
Ga0207674_114059313	3300026116	Corn Rhizosphere	GAVCGNPHDAASWWLIVDLDARVMRWHRKTFGSEEAAAACL
Ga0209813_103923111	3300027866	Populus Endosphere	YEWLAIGACMANPGAVCGNPRDAASWWLIVDVDARELRWNRNEFESKAAGPSGA
Ga0209481_100766551	3300027880	Populus Rhizosphere	AATRAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDTDARVLRWHRKEFESEEAAAAGL
Ga0209486_107348762	3300027886	Agricultural Soil	MANPGAVCGNPRDAASWWLTVDIDARVLRWHRTEFVSGEAGAAGL
Ga0247822_117439502	3300028592	Soil	PGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGV
Ga0307503_100023901	3300028802	Soil	DWLALGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGEAAAAGM
Ga0306918_103430901	3300031744	Soil	FMANPGAVCGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAATACL
Ga0318502_106683241	3300031747	Soil	GACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGGAGAAGV
Ga0318546_104472681	3300031771	Soil	VPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGGAGAAGV
Ga0318547_103798181	3300031781	Soil	AYDGAATGAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGGAGAAGV
Ga0302322_1035251191	3300031902	Fen	FAYDGAATRAVRPVPGESYDWLATEACMANPGAVCGNPRDAASWWLIVDVDARVLRWHRKEFESGEAAAAGV
Ga0306921_108403533	3300031912	Soil	ACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGGAGAAGV
Ga0310891_100989392	3300031913	Soil	LATGACMANPGAVCGNPRDAASWWLTVDIGARVLRWHRKEFESGEAAAAGV
Ga0310912_100599935	3300031941	Soil	ATGAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFESGGAGAAGV
Ga0306926_125458122	3300031954	Soil	YDWLATGACMANPGAVCGSPRDAASWWLIIDIDARVLRWDRRKFDSGEAVAAGV
Ga0318513_101096572	3300032065	Soil	DGAAMRAVRPVPGESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDNRVLRWHRKEFESGEPGAAGV
Ga0306924_112348592	3300032076	Soil	CGNPRDAASWWLIVDIDARVMRWHRKTFGTEEAAAACL
Ga0310896_107914312	3300032211	Soil	GACMANPGAVCGNPRDAASWWLIVDIDARELRWHRKEFESGEAAAAGV
Ga0247829_109431912	3300033550	Soil	ESYDWLATGACMANPGAVCGNPRDAASWWLIVDIDARVLQWHRKEFESGEAAAAGV
Ga0364938_026861_742_879	3300034114	Sediment	MANPGAVCGNPRDAASWWLIVDIDARVLRWHRKEFGSEDAAAAGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065950

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences