Metagenome / Metatranscriptome Family F065948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	70 residues
Representative Sequence	MQPKDLERIAKTALRELGAGDPPLTITADGQPDRWRLSVGGSDPATITIRAGSGTTPGHIREQIFNQFSGR
Number of Associated Samples	105
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.24 %
% of genes near scaffold ends (potentially truncated)	33.07 %
% of genes from short scaffolds (< 2000 bps)	89.76 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.827 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.598 % of family members)
Environment Ontology (ENVO)	Unclassified (34.646 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.606 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 17.17% Coil/Unstructured: 55.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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SCOP family	SCOP domain	Representative PDB	TM-score
e.43.1.2: Subunits of heterodimeric actin filament capping protein Capz	d3aa7b_	3aa7	0.67
e.43.1.2: Subunits of heterodimeric actin filament capping protein Capz	d3aa7b_	3aa7	0.67
e.43.1.1: Subunits of heterodimeric actin filament capping protein Capz	d3aa0a_	3aa0	0.65
e.43.1.1: Subunits of heterodimeric actin filament capping protein Capz	d3aa0a_	3aa0	0.65
d.17.4.0: NTF2-like	d5ig0a_	5ig0	0.63
d.17.4.0: NTF2-like	d5ig0a_	5ig0	0.63
d.17.4.5: NTF2-like	d1vqqa1	1vqq	0.62
d.17.4.4: NTF2-like	d2b1xb1	2b1x	0.62
d.17.4.5: NTF2-like	d1vqqa1	1vqq	0.62
d.17.4.4: NTF2-like	d2b1xb1	2b1x	0.62

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF02735	Ku	17.32
PF00990	GGDEF	2.36
PF07081	DUF1349	2.36
PF02518	HATPase_c	1.57
PF00072	Response_reg	0.79
PF04940	BLUF	0.79
PF01833	TIG	0.79
PF04238	DUF420	0.79
PF13091	PLDc_2	0.79
PF13754	Big_3_4	0.79
PF12981	DUF3865	0.79
PF04679	DNA_ligase_A_C	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	17.32
COG3506	Regulation of enolase protein 1 (function unknown), concanavalin A-like superfamily	Function unknown [S]	2.36
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.79
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.78 %
Unclassified	root	N/A	14.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.73 %
Unclassified	root	N/A	14.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	14.17 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	14.17 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	0.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	14.17 %
Methyloversatilis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	14.17 %
Methyloversatilis thermotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis thermotolerans	0.79 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.73 %
Unclassified	root	N/A	14.17 %
Pseudonocardia xinjiangensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia xinjiangensis	0.79 %
Methyloversatilis thermotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis thermotolerans	0.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102540447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1739	Open in IMG/M
3300000956\|JGI10216J12902_110300680	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300002568\|C688J35102_117743912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → Methyloversatilis thermotolerans	503	Open in IMG/M
3300004114\|Ga0062593_101216695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300004114\|Ga0062593_101964083	Not Available	648	Open in IMG/M
3300004153\|Ga0063455_100135461	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300004156\|Ga0062589_102123571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300004157\|Ga0062590_102468369	Not Available	550	Open in IMG/M
3300004463\|Ga0063356_106241890	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300004480\|Ga0062592_100095198	All Organisms → cellular organisms → Bacteria → Acidobacteria	1823	Open in IMG/M
3300004643\|Ga0062591_101256413	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005093\|Ga0062594_100771740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300005093\|Ga0062594_101925831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300005179\|Ga0066684_10176374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1371	Open in IMG/M
3300005290\|Ga0065712_10012752	Not Available	2397	Open in IMG/M
3300005293\|Ga0065715_10313732	Not Available	1015	Open in IMG/M
3300005328\|Ga0070676_10821999	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300005331\|Ga0070670_100023111	All Organisms → cellular organisms → Bacteria	5351	Open in IMG/M
3300005334\|Ga0068869_100031343	All Organisms → cellular organisms → Bacteria	3740	Open in IMG/M
3300005337\|Ga0070682_101415713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300005345\|Ga0070692_10402709	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005438\|Ga0070701_11380392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005445\|Ga0070708_101671556	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300005454\|Ga0066687_10519373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005466\|Ga0070685_10864759	Not Available	671	Open in IMG/M
3300005467\|Ga0070706_102105231	Not Available	510	Open in IMG/M
3300005535\|Ga0070684_100033024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4416	Open in IMG/M
3300005535\|Ga0070684_102156186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005543\|Ga0070672_101848507	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300005563\|Ga0068855_100677938	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300005566\|Ga0066693_10183884	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005577\|Ga0068857_101182977	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300005617\|Ga0068859_102384241	Not Available	583	Open in IMG/M
3300005618\|Ga0068864_101332300	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005713\|Ga0066905_101027343	Not Available	728	Open in IMG/M
3300005719\|Ga0068861_102391672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	531	Open in IMG/M
3300006038\|Ga0075365_10061806	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300006038\|Ga0075365_10433898	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300006051\|Ga0075364_10630134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300006178\|Ga0075367_10801613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300006195\|Ga0075366_10098730	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300006845\|Ga0075421_100235048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2253	Open in IMG/M
3300006852\|Ga0075433_10696821	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300007004\|Ga0079218_11570338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300009094\|Ga0111539_10297892	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300009094\|Ga0111539_11719058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300009156\|Ga0111538_13634021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009553\|Ga0105249_13487282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300009609\|Ga0105347_1362188	Not Available	619	Open in IMG/M
3300009789\|Ga0126307_10413945	All Organisms → cellular organisms → Bacteria → Acidobacteria	1087	Open in IMG/M
3300009789\|Ga0126307_10874167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300009840\|Ga0126313_11275084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300010036\|Ga0126305_11165014	Not Available	532	Open in IMG/M
3300010037\|Ga0126304_10245325	All Organisms → cellular organisms → Bacteria → Acidobacteria	1178	Open in IMG/M
3300010042\|Ga0126314_10551881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300010152\|Ga0126318_10634499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300010154\|Ga0127503_10874970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010375\|Ga0105239_11677540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300010399\|Ga0134127_11130481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300010403\|Ga0134123_12184827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012046\|Ga0136634_10189327	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300012209\|Ga0137379_10286011	All Organisms → cellular organisms → Bacteria → Acidobacteria	1560	Open in IMG/M
3300012212\|Ga0150985_102426605	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012212\|Ga0150985_103461446	Not Available	667	Open in IMG/M
3300012212\|Ga0150985_105392050	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300012212\|Ga0150985_113658047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300012212\|Ga0150985_114004169	Not Available	568	Open in IMG/M
3300012212\|Ga0150985_120346994	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300012212\|Ga0150985_120927748	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300012407\|Ga0134050_1067519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012469\|Ga0150984_103347327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300012469\|Ga0150984_115143873	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012676\|Ga0137341_1060220	Not Available	636	Open in IMG/M
3300012680\|Ga0136612_10233559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300012892\|Ga0157294_10301826	Not Available	512	Open in IMG/M
3300012898\|Ga0157293_10244565	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012903\|Ga0157289_10031789	All Organisms → cellular organisms → Bacteria → Acidobacteria	1237	Open in IMG/M
3300012971\|Ga0126369_13700801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300014325\|Ga0163163_10383300	All Organisms → cellular organisms → Bacteria → Acidobacteria	1463	Open in IMG/M
3300014325\|Ga0163163_10754024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia xinjiangensis	1037	Open in IMG/M
3300014325\|Ga0163163_11754976	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300014325\|Ga0163163_13337997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300014326\|Ga0157380_11546110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300015371\|Ga0132258_10469944	All Organisms → cellular organisms → Bacteria	3139	Open in IMG/M
3300018067\|Ga0184611_1108911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300018476\|Ga0190274_13448988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018481\|Ga0190271_11436414	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300019356\|Ga0173481_10853434	Not Available	509	Open in IMG/M
3300020020\|Ga0193738_1002839	All Organisms → cellular organisms → Bacteria → Acidobacteria	6420	Open in IMG/M
3300024055\|Ga0247794_10144623	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300025893\|Ga0207682_10338869	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300025907\|Ga0207645_10298679	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300025920\|Ga0207649_11105458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300025923\|Ga0207681_10109018	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300025930\|Ga0207701_10356071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1265	Open in IMG/M
3300025942\|Ga0207689_10025426	All Organisms → cellular organisms → Bacteria	4963	Open in IMG/M
3300025945\|Ga0207679_12122188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300025961\|Ga0207712_10482108	All Organisms → cellular organisms → Bacteria → Acidobacteria	1057	Open in IMG/M
3300025961\|Ga0207712_12093325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300026088\|Ga0207641_11763868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300026095\|Ga0207676_11029222	Not Available	812	Open in IMG/M
3300027866\|Ga0209813_10153784	Not Available	826	Open in IMG/M
3300027886\|Ga0209486_10561493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300027909\|Ga0209382_10473201	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300028802\|Ga0307503_10132407	All Organisms → cellular organisms → Bacteria → Acidobacteria	1109	Open in IMG/M
3300028810\|Ga0307294_10069255	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300028824\|Ga0307310_10215291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300030904\|Ga0308198_1046344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300031366\|Ga0307506_10255268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300031716\|Ga0310813_10725354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300031824\|Ga0307413_11585721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031938\|Ga0308175_101197565	Not Available	844	Open in IMG/M
3300031940\|Ga0310901_10142732	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300031995\|Ga0307409_101468232	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032000\|Ga0310903_10837591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032002\|Ga0307416_102096468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300032005\|Ga0307411_10790613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300032017\|Ga0310899_10388331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300032017\|Ga0310899_10621764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300032017\|Ga0310899_10690366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300032075\|Ga0310890_10336808	All Organisms → cellular organisms → Bacteria → Acidobacteria	1098	Open in IMG/M
3300032126\|Ga0307415_102523510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300032163\|Ga0315281_10302141	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300033412\|Ga0310810_10002364	All Organisms → cellular organisms → Bacteria	20286	Open in IMG/M
3300033412\|Ga0310810_10209620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2191	Open in IMG/M
3300033412\|Ga0310810_10564400	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300034151\|Ga0364935_0276211	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.91%
Host-Associated	Host-Associated	44.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.61%
Plants	Host-Associated → Plants	44.09%
Aquatic	Environmental → Aquatic	6.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.75%
Roots	Host-Associated → Plants → Roots	7.87%
Freshwater	Environmental → Aquatic → Freshwater	3.94%
Sediment	Environmental → Aquatic → Sediment	2.36%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.60%
Loam	Environmental → Terrestrial → Soil → Loam	8.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.87%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.57%
Ice	Environmental → Aquatic → Freshwater → Ice	1.57%
Lake	Environmental → Aquatic → Freshwater → Lake	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.30%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.72%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.51%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.51%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.72%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.36%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.57%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1025404472	3300000956	Soil	MQVQDVERIAKAVFRELGAGDPPVTITPGRQADSWRIEVGGSDPATLTIRAGAGTTPQFVREQIFNQFAAR*
JGI10216J12902_1103006802	3300000956	Soil	MQLQDLERIAKLALRELGAGDPPIQIIAEPAERWRLEVGGKEPLTIRIRAGSGTTPQYVREQIFTQFGAR*
C688J35102_1177439121	3300002568	Soil	MQAEELERIAKIALRELGAGDPPIHVAPEGRADRWRINVGGKDPLTLTIRAGSGTAPAHIREQIFTQFGAR*
Ga0062593_1012166951	3300004114	Soil	MQLSDLERIAKLALRELGAGEAAITITQEQGGDRWKLQVGGNNPATLVIRAGAGTSAQHVRTQIFEQFAGR*
Ga0062593_1019640832	3300004114	Soil	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGAGTTPNHIREQIFNQFSGR*
Ga0063455_1001354612	3300004153	Soil	MQAADLERITRHALRELGTGDVPLTVTPDGGPDRWRVQVGGSVQTTFVIRAGAGTSAQFIRDQIFEQFR*
Ga0062589_1021235711	3300004156	Soil	MQLHDLERIAKLALRELGAGEPPIQIIAEPAERWRLEVGGKDPLTMTIRAGSGTTPQFIREQIFTQFGAR*
Ga0062590_1024683692	3300004157	Soil	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEVGGSSPATLTIRAGTGTTPNHIREQIFNQFSGR*
Ga0063356_1062418901	3300004463	Arabidopsis Thaliana Rhizosphere	MQLQDLERIAKLALRELGAGEPPIQIIAEPAERWRLEVGGKDPLTMTIRAGSGTTPQFIREQIFTQFGAR*
Ga0062592_1000951982	3300004480	Soil	MQIQEIEHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR*
Ga0062591_1012564132	3300004643	Soil	MEAQDLERIAKLALRELGAGDPPVTISADRPDRWRIVVGGNDPVILTIRAGSGTTAQYVREQIFTQFAGR*
Ga0062594_1007717401	3300005093	Soil	MQLEDLERIAKLALRELGAGNPPIRIVAEPAERWRLEVGGQEPLTMTIRAGSGTTPQFIREQIFNQFGAR*
Ga0062594_1019258312	3300005093	Soil	MQIQELERIAKAVLRELGAGDAPIRIEPDTHADRWRIEVGGSDPVTLTIRAGAGTTPQFVREQIFTQFAAR*
Ga0066684_101763743	3300005179	Soil	MQPHDLERIAKLALRELGAGDVSLTVTAEAQPDRWRLAVGGSVQRTLSIRAGSGTTAQYVREQIFDQYNRR*
Ga0065712_100127523	3300005290	Miscanthus Rhizosphere	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGTGTTANHIREQIFNQFSGR*
Ga0065715_103137323	3300005293	Miscanthus Rhizosphere	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEVGGSNPATLTIRAGTGTTANHIREQIFNQFSGR*
Ga0070676_108219992	3300005328	Miscanthus Rhizosphere	MQIQELERIAKAVLRELGAGDAPMRIEPDTHADRWRIEVGGSDPVTLTIRAGAGTTPQFVREQIFTQFAAR*
Ga0070670_1000231113	3300005331	Switchgrass Rhizosphere	MQIQDIEHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR*
Ga0068869_1000313433	3300005334	Miscanthus Rhizosphere	MQPPDLERIAKLALRELGMGNSPLTITADSQPDRWRLSIGGSHPATLTIRAGSGTTANHIREQIFNQFSGR*
Ga0070682_1014157131	3300005337	Corn Rhizosphere	MQTEDLERIAKHALRELGAGDVPVTITADAQADRWRVAVGGTHPMTMSIRAGAGTTPQFVREQIFEQFAQR*
Ga0070692_104027092	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MQPADLERIAKKALRELGVGDPPLTITADGQPDRWRLTIGGSDPATLTIRAGAGTTANHIREQIFNQFSGR*
Ga0070701_113803921	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	EDLERIAKLALRELGAGNPPIRIVAEPAERWRLEVGGQEPLTMTIRAGSGTTPQFIREQIFNQFGAR*
Ga0070708_1016715561	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PFMQPLDLERIAKKVLRELGVGDPPLKITAESVPDRWRLEVGGSNPATLTIRAGTGTTPNHIREQIFNQFSGR*
Ga0066687_105193731	3300005454	Soil	MQPEDLERIAKKALRELGAGDPPLTITADGQPDRWVLSVGGSDPVTLIIRAGAGTTPGHIREQIFNQFAGR*
Ga0070685_108647591	3300005466	Switchgrass Rhizosphere	MQTEDLERIAKHALRELGAGDVPVTITADAQADRWRVAVGGTHPMTMSIRAGAGTTPQFVREQIFEQ
Ga0070706_1021052312	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MQLEDLERIAKKALRELGMGDPPLTITADGQPDRWRVNVGGNNPATLTIRAGTGTTPGHVREQIFNQFSGR*
Ga0070684_1000330241	3300005535	Corn Rhizosphere	MDPQDLERIAKLALRELGAGDVPLTITPDTPADRWRVEIGGAVQTTLRIRAGAGTSAQFI
Ga0070684_1021561862	3300005535	Corn Rhizosphere	RELGAGEPPLRIEPDTLPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR*
Ga0070672_1018485072	3300005543	Miscanthus Rhizosphere	MHMQEIERIAKIALRELGAGDPPLKIEHDSQADRWRIDVGGNDPMTLTVRAGSGTTPQFVREQIFNQFAAR*
Ga0068855_1006779381	3300005563	Corn Rhizosphere	IAKRVLRELGAGDVPVTVTHDDRSDRWRVEIGGSAQTTLSIRAGAGTSAQFIRDQIFEQFSRR*
Ga0066693_101838842	3300005566	Soil	MTAEDLERIAKRALRELGAGDAPLTVTAASGDRWRLVVGGSTPFTLLVRGGAGTSAQFIREQIFEQFSGR*
Ga0068857_1011829772	3300005577	Corn Rhizosphere	GAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR*
Ga0068859_1023842411	3300005617	Switchgrass Rhizosphere	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGTGTTAN
Ga0068864_1013323002	3300005618	Switchgrass Rhizosphere	MQAADLERIAKHALRELGAGDVPLTVTQESRPDRWRLDVGGSAPARLSIRAGAGTSPQFIRDQIFEQFR*
Ga0066905_1010273431	3300005713	Tropical Forest Soil	MDAQALERIARHALRELGTGDVPITITAAPQPGRWHVEIGGAVQTTLTIRASAGTSAQFVRDQI
Ga0068861_1023916721	3300005719	Switchgrass Rhizosphere	MQPPDLERIAKLALRELGMGNSPLTITADSQPDRWRLSIGGSHPATLTIRAGSGTTANHIREQIFNQF
Ga0075365_100618062	3300006038	Populus Endosphere	MQPPDLERIAKLALRELGAGDPPLTITADGQPGRWRLSIGGSSPATLTIRAGTGTTANHIREQIFNQFSGR*
Ga0075365_104338982	3300006038	Populus Endosphere	MDVQALERIAKHALRELGAGDVPLTVTQEARPDRWRLDVGGSAPATLSIRAGAGTSPQFIREQIFEQFSDR*
Ga0075364_106301342	3300006051	Populus Endosphere	MDVQALERIAKHALRELGAGDVPLTVTQESRPDRWRLDVGGSAPARLSIRAGAGTSPQFIRDQIFEQFSGR*
Ga0075367_108016132	3300006178	Populus Endosphere	AVSCCIVELHPMQPKDLERIAKTALRELGFGDPPLTIATDGQPDRWRLSIGGSDPATITIRAGSGTTANHVREQIFNQFSGR*
Ga0075366_100987302	3300006195	Populus Endosphere	MDPQALERIAKHALRELGAGDPPLTVTPESRPDRWRVEVGGSDPATLSIRAGAGTSPQFIRDQIFEQFSGRG*
Ga0075421_1002350483	3300006845	Populus Rhizosphere	MQAHDLERIAKTALRELGAGNPPVTVVADERHPDRWRIDVAGNDPVSLSVRAGSGTTAQYVREQIVNQLTGR*
Ga0075433_106968211	3300006852	Populus Rhizosphere	MDSQELERIAKHALRELGAGDVPLTVTPAAQPDRWRLEIGGSIQATITIRAGAGTRAQFVRDQIFEKFSGR*
Ga0079218_115703382	3300007004	Agricultural Soil	VRPTPMELQDLERIAKTALRELGVGNPPLTITPAAGQPDRWQVAVGGSDPTTLTIRAGSGTTPQFIREQIFNQFGAR*
Ga0111539_102978922	3300009094	Populus Rhizosphere	MQPKDLERIAKTALRELGFGDPPLTIATDGQPDRWRLSIGGSDPATITIRAGSGTTANHVREQIFNQFSGR*
Ga0111539_117190582	3300009094	Populus Rhizosphere	MQPEELERIAKKALRELGAGDPPVTITGDGQPDRWRVHVGGSDPATLTIRAGAGTTPGHVREQIFSQFAGR*
Ga0111538_136340212	3300009156	Populus Rhizosphere	LRELGAGDVPLTVTQEARPDRWRLDVGGSAPATLSIRAGAGTSPQFIREQIFEQFSDR*
Ga0105249_134872822	3300009553	Switchgrass Rhizosphere	PPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGAGTTPNHIREQIFNQFSGR*
Ga0105347_13621882	3300009609	Soil	MEAHDLERIAKVVFRELGAGDPPVTITADGQPGRWRIVVGGSDPVTLTIRAGSGTTAQFIREQIFTQFAGR*
Ga0126307_104139452	3300009789	Serpentine Soil	MQTQDLERIAKAALRELGAGDPPLVITPDGKQTDRWRVEVGGSDPLTLDIRAGSGTTPHSVREQIFNQFAAR*
Ga0126307_108741671	3300009789	Serpentine Soil	MEAQDVERIAKVVLRELGAGDPPITVSADSQPDRWRIVVGGNDPATLIIRAGSGTTAQYVREQIFNQFAGR*
Ga0126313_112750842	3300009840	Serpentine Soil	MQTQDLERIAKAALRELGAGDPPLTITPDTTQTDRWRVDVGGSDPLTLNIRAGSGTTAHAVREQIFNQFAAR*
Ga0126305_111650141	3300010036	Serpentine Soil	FPISNRCAIVTAFPMEAQDVERIAKVVLRELGAGDPPITVSADSQPDRWRIVVGGNDPATLIIRAGSGTTAQYVREQIFNQFAGR*
Ga0126304_102453251	3300010037	Serpentine Soil	KAALRELGAGDPPLVITPDGKQTDRWRVEVGGSDPLTLDIRAGSGTTPHSVREQIFNQFAAR*
Ga0126314_105518812	3300010042	Serpentine Soil	MQTEDLERIAKHALRELGAGDVPVTITAEAQADRWRVAVGGNQPITMLIRAGAGTTPQFVREQIFQQFGAR*
Ga0126318_106344992	3300010152	Soil	MESVDLERIIKHALRELGTGEVPVTIERDHGPDRWRVAIGGSFQTTLTIRAGAGTSPQFIRDQVFEQFK*
Ga0127503_108749702	3300010154	Soil	MQPPDLERIAKLALRELGAGDPPITITAAGQPDRWRVEVGGSDPFTLTVRAGNGTTANHIREQIFNQFS
Ga0105239_116775402	3300010375	Corn Rhizosphere	ALRELGAGDVPLTITPDTPADRWRVEIGGAVQTTLRIRAGAGTSAQFIRDQIFEQFSGR*
Ga0134127_111304812	3300010399	Terrestrial Soil	MLPRDLERIAKKALRELGAGDLPLTITADAVPDRWRVSIGGSDPMTLTVRAGDGTTANHIREQIFNQFSGR*
Ga0134123_121848272	3300010403	Terrestrial Soil	MDAQGLERIAKLALRELGTGDAPVTVSATAQPDRWRVEIGGSIGATLTIRAGAGTSPQFIREQIFEQFSGR*
Ga0136634_101893271	3300012046	Polar Desert Sand	MQAQGVERIAKIAFGERGAGNRPVTVTADSQPDRWRIVVGGSDPATLTIRAGSGTTPQFVREQIFDQLAGR*
Ga0137379_102860112	3300012209	Vadose Zone Soil	MQSHDLERIAKLVLRELGAGDLPVTVTTGDQPDRWKVDVGGSAPVTLSIRAGAGTTAQFVRTQIFEQYSGR*
Ga0150985_1024266052	3300012212	Avena Fatua Rhizosphere	MQAEELERIAKIALRELGAGDPPIHVLPEGQADRWRINVGGKDPLTLTIRAGSGTAPAHIREQIFTQFGAR*
Ga0150985_1034614462	3300012212	Avena Fatua Rhizosphere	MDAQALERIAKHALRELGTGDVPITVTAGSQPDRWRIDVGGSVQTTLTIRAGAGTTPQFIREQIFEQFSGR*
Ga0150985_1053920502	3300012212	Avena Fatua Rhizosphere	MQIQEIERIAKAALRELGAGDPPITIAPDAHADRWRIDVGGNDPVRLTIRAGSGTTARFVREQIFNQLAGR*
Ga0150985_1136580472	3300012212	Avena Fatua Rhizosphere	MDTEALERIAKHTLRELGVGDVPLTITPESRPDRWRLEIGGSAPATLSIRAGDGTSAQFIRDQIFEQFSGR*
Ga0150985_1140041691	3300012212	Avena Fatua Rhizosphere	MQAEELERIAKIALRELGAGEPPIHVAPEGQADRWRINVGGRDPLTLTIRAGSGTAPAHIREQIFTQFGAR*
Ga0150985_1203469942	3300012212	Avena Fatua Rhizosphere	MQVADLERIAKLALRELGAGDPPIAIASAAQPGCWTIDVGGSEPAVLRIRAGAGTTPQFVREQIVTQFVNR*
Ga0150985_1209277482	3300012212	Avena Fatua Rhizosphere	MQLEDLERIAKHALRELGAGDVPLTITPEAQPDRWRVAVGGNDPATLWIRAGAGTTPQFVREQIIEQFAGR*
Ga0134050_10675192	3300012407	Grasslands Soil	MDSQALERIAKLALRELGTGDVPVTVTPTSQPDRWRLEVGGSIQTTLTIRAGAGTS
Ga0150984_1033473271	3300012469	Avena Fatua Rhizosphere	MQIQEIERIAKAALRELGAGDPPITIAPDAHADRWRIDVGGNDPVRLTIRAGSGTTARFVREQIFNQFAGR*
Ga0150984_1151438732	3300012469	Avena Fatua Rhizosphere	MQAEELERIAKIALRELGAGEPPIHVAPDGQADRWRINVGGKDPLTLTIRAGSGTAPAHIREQIFTQFGAR*
Ga0137341_10602201	3300012676	Soil	MQPKDLERIAKTALRELGAGDPPLTITADGQPDRWRLSVGGSDPATITIRAGSGTTPGHIREQIFNQFSGR*
Ga0136612_102335592	3300012680	Polar Desert Sand	MEQQDLERIAKKALCELGVGDPPLTITPADGPPGRWRMTVGGSDPATLTIRAGSGTTPGHIREQIFNQFSGR*
Ga0157294_103018261	3300012892	Soil	MEPQDLERIAKLALRELGIGDPPLTITADDAQPDRWRVQIGGSDPATLTIRAGSGTTPNHVREQIFNQFGAR*
Ga0157293_102445652	3300012898	Soil	MQVSDLERIAKLALRELGAGDPAITITQEQGGDRWKLQVGGSDPSTLVIRAGAGTSAQHVRTQIFEQFAGR*
Ga0157289_100317892	3300012903	Soil	MQASDLERIAKLALRELGAGEPTITITQEQGDRWKLQVGGSDPLTLLIRAGAGTSAQHVRTQIFEQFAAR*
Ga0126369_137008012	3300012971	Tropical Forest Soil	MDAADLERIAKHALRELGAGDPPLTITPDSRADRWRVEVGGSVQTTLSIRAGAGTSAQFVRDQIFEQFSGR*
Ga0163163_103833001	3300014325	Switchgrass Rhizosphere	IPMQTEDLERIAKHALRELGAGDVPVTITADAQADRWRVAVGGTHPMTMSIRAGAGTTPQFVREQIFEQFAQR*
Ga0163163_107540242	3300014325	Switchgrass Rhizosphere	MQVTDLERIAKLALRELGAGEPAITITQEPGGDRWKLQVGGSDPATLVIRAGAGTSAQHV
Ga0163163_117549762	3300014325	Switchgrass Rhizosphere	MQPVDLERIAKQALRELGVGDPPLTITNDGQPDRWRVSVGGSEPATLTIRAGSGTTPGHIREQIFNQFSGR*
Ga0163163_133379971	3300014325	Switchgrass Rhizosphere	MQAADLERIAKHALRELGTGDVPVTVTADSQPDRWRVEIGGNVQMTLSIRAGAGTRPQFIRDQIFEQFR*
Ga0157380_115461102	3300014326	Switchgrass Rhizosphere	ELHPMQPKDLERIAKTALRELGAGDPPLTITADGQPDRWRLSIGGSDPATLTIRAGSGTTANHVREQIFNQFSGR*
Ga0132258_104699442	3300015371	Arabidopsis Rhizosphere	MQIQQIEHIAKVALRELGAGDPPLKIEPDTQPDRWRIDVGGSDPVTLNVRAGSGTTAQFVREQIFNQFAAR*
Ga0184611_11089113	3300018067	Groundwater Sediment	IAKLALRELGIGEPPVTITADGQPDRWRVQIGGSDPATLTIRAGSGTTPNHVREQIFNQFGAR
Ga0190274_134489882	3300018476	Soil	MEAHDLERIAKVVLRELGAGDPPVTITADSQPDRWRIVVGGSDPATLTIRAGSGTTPQFVREQIFNQF
Ga0190271_114364142	3300018481	Soil	MHATDLERIAKLALRELGAGDAAITITQEPGGDRWRLQVGGSDPMTLLIRAGSGTTPQFVRTQIFEQFAAR
Ga0173481_108534341	3300019356	Soil	MQASDLERIAKLALRELGAGEPAITITQEQGDRWKLQVGGSDPLTLLIRAGAGTSAQHVRTQIFEQFAAR
Ga0193738_100283911	3300020020	Soil	MQASDLERIAKLALRELGVGDAAITITPEQGDRWKLQVGGSDPATLLIRAGTGTSAQHIRTQIFEQFAGR
Ga0247794_101446231	3300024055	Soil	LMDSLDLERIAKHALRELGTGDVPLTVTAESQPDRWRVEVGGSVQTTFRIRAGAGTSAQFIRDQIFEQFSGR
Ga0207682_103388692	3300025893	Miscanthus Rhizosphere	QIQELERIAKAVLRELGAGDAPIRIEPDTHADRWRIEVGGSDPVTLTIRAGAGTTPQFVREQIFTQFAAR
Ga0207645_102986791	3300025907	Miscanthus Rhizosphere	RIAKAVLRELGAGDAPMRIEPDTHADRWRIEVGGSDPVTLTIRAGAGTTPQFVREQIFTQFAAR
Ga0207649_111054581	3300025920	Corn Rhizosphere	AIVAARPMQIQDIEHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR
Ga0207681_101090182	3300025923	Switchgrass Rhizosphere	MQLEDLERIAKLALRELGAGNPPIRIVAEPAERWRLEVGGQEPLTMTIRAGSGTTPQFIREQIFNQFGAR
Ga0207701_103560712	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MQIQEIEHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR
Ga0207689_100254263	3300025942	Miscanthus Rhizosphere	MQPPDLERIAKLALRELGMGNSPLTITADSQPDRWRLSIGGSHPATLTIRAGSGTTANHIREQIFNQFSGR
Ga0207679_121221881	3300025945	Corn Rhizosphere	PMQTEDLERIAKHALRELGAGDVPVTITADAQADRWRVAVGGTHPMTMSIRAGAGTTPQFVREQIFEQFAQR
Ga0207712_104821082	3300025961	Switchgrass Rhizosphere	ALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR
Ga0207712_120933252	3300025961	Switchgrass Rhizosphere	PPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGAGTTPNHIREQIFNQFSGR
Ga0207641_117638682	3300026088	Switchgrass Rhizosphere	MQPPDLERIAKLALRELGVGDPPLTITADSQPDRWRLSIGGSDPMTLTIRAGSGTTANHIREQIFNQFSGR
Ga0207676_110292223	3300026095	Switchgrass Rhizosphere	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGTGTTANHI
Ga0209813_101537842	3300027866	Populus Endosphere	MDVQALERIAKHALRELGAGDVPLTVTQEARPDRWRLDVGGSAPATLSIRAGAGTSPQFIREQIFEQFSDR
Ga0209486_105614932	3300027886	Agricultural Soil	VRPTPMELQDLERIAKTALRELGVGNPPLTITPAAGQPDRWQVAVGGSDPTTLTIRAGSGTTPQFIREQIFNQFGAR
Ga0209382_104732013	3300027909	Populus Rhizosphere	MQAHDLERIAKTALRELGAGNPPVTVVADERHPDRWRIDVAGNDPVSLSVRAGSGTTAQYVREQIVNQLTGR
Ga0307503_101324072	3300028802	Soil	MQPQDLERIAKKALRELGVGDPPVTISADEGVPDRWRVSIGGSDPATLTIRAGDGTSAGHIREQIFNQFGGR
Ga0307294_100692552	3300028810	Soil	MQATDLERIAKAALRELGAGDPAITITQEQSGDRWKLQVGGSDPVTFLIRAGAGTSAQHIRTQIFEQFAAR
Ga0307310_102152912	3300028824	Soil	KALRELGVGDPPLTITADAVPDRWRVNVGGSDPATLTIRAGVGTTANHIREQIFNQFSGR
Ga0308198_10463441	3300030904	Soil	LERIAKLALRELGAGDPPLTITADAQPDRWRLSIGGSSPTILTIRAGRGTTPNHIREQIFTQFGAR
Ga0307506_102552682	3300031366	Soil	MQPPDLERIAKLALRELGVGEPPLTITADSQPDRWRLTIGGSDPMTLTIRAGSGTTANHIREQIFNQFSGRQ
Ga0310813_107253542	3300031716	Soil	MQSSDLERIAKTALRELGAGDVPVTVTPQSTPDRWQIAIGGSVQMTMTIRAGAGTSPQFIRDQIFEQYR
Ga0307413_115857212	3300031824	Rhizosphere	MQVQDLERIAKLALRELGAGDPPIQIIAEPAERWRIEVGGREPLTMRIRAGSGTTPQFVREQIFTQFGAR
Ga0308175_1011975652	3300031938	Soil	MEAHDLERIAKAVLRELGAGEAALTLEADQQPDRWRLSIGGPAPSTLLVRAGRGTSAQHIRQQIFDHLQKR
Ga0310901_101427322	3300031940	Soil	ALRELGAGNPPIRIVAEPAERWRLEVGGQEPLTMTIRAGSGTTPQFIREQIFNQFGAR
Ga0307409_1014682322	3300031995	Rhizosphere	VIESREIERIAKIAVRELGAGDPPITVTADTQPDRWRIEIGGNDPATLLIRAGSGTTPQYIREQIVQQFAGR
Ga0310903_108375912	3300032000	Soil	DCAIVAARPMQIQEIEHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR
Ga0307416_1020964682	3300032002	Rhizosphere	MQLQDLERIARLALRELGAGEPPIQIIAEPAERWRLEVGGKDPLTMTIRAGSGTTPQFIREQIFTQFGAR
Ga0307411_107906132	3300032005	Rhizosphere	GEPVGAAVIESREIERIAKIAVRELGAGDPPITVTADTQPDRWRIEIGGNDPATLLIRAGSGTTPQYIREQIVQQFAGR
Ga0310899_103883312	3300032017	Soil	MHMQEIERIAKIALRELGAGDPPLKIEHDSQADRWRIDVGGNDPMTLTVRAGSGTTPQFVREQIFNQFAAR
Ga0310899_106217642	3300032017	Soil	MQIQELERIAKAVLRELGAGDAPIRIEPDTHADRWRIEVGGSDPVTLTIRAGAGTTPQFVREQIFTQFAAR
Ga0310899_106903662	3300032017	Soil	MDVQALERIAKHALRELGAGDVPLTVTPDSRPDRWRLQVGGSDPATLSIRAGAGTSPQFIRDQIFEQFSDR
Ga0310890_103368081	3300032075	Soil	VAARPMQIQDIEHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR
Ga0307415_1025235101	3300032126	Rhizosphere	GARQSEGAPREEAGEPVGAAVIESREIERIAKIAVRELGAGDPPITVTADTQPDRWRIEIGGNDPATLLIRAGSGTTPQYIREQIVQQFAGR
Ga0315281_103021413	3300032163	Sediment	MLPEDLERIAKKALRELGVGDPPLTITADGQPDRWRVSVGGSDPATLTIRAGAGTTPGHIREQIFNQFSGR
Ga0310810_1000236412	3300033412	Soil	MQPPDLERIAKKVLRELGVGDPPLKITADGVPDRWRLEIGGSNPATLTIRAGTGTTANHIREQIFNQFSGR
Ga0310810_102096204	3300033412	Soil	MQTEDLERIAKHALRELGAGDVPVTITADAQADRWRVAVGGTHPMTMSIRAGAGTTPQFVREQIFEQFAQR
Ga0310810_105644002	3300033412	Soil	EHIAKVALRELGAGEPPLRIEPDTVPDRWRIDVGGNDPLTLTVRAGSGTTAQFVREQIFNQFAAR
Ga0364935_0276211_392_550	3300034151	Sediment	MQVSDLERIAKLALRELGAGDASITITQEPGGDRWKLQVGGSDPVTLLIRAGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences