Metagenome / Metatranscriptome Family F065886

Basic Information
Family ID	F065886
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	88 residues
Representative Sequence	MLSAVGLGRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Number of Associated Samples	112
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.72 %
% of genes near scaffold ends (potentially truncated)	42.52 %
% of genes from short scaffolds (< 2000 bps)	92.91 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (59.843 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.685 % of family members)
Environment Ontology (ENVO)	Unclassified (39.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.331 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.05% Coil/Unstructured: 78.95%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF08546	ApbA_C	3.15
PF07589	PEP-CTERM	2.36
PF13407	Peripla_BP_4	2.36
PF13561	adh_short_C2	1.57
PF01381	HTH_3	0.79
PF02776	TPP_enzyme_N	0.79
PF00293	NUDIX	0.79
PF04055	Radical_SAM	0.79
PF00114	Pilin	0.79
PF00126	HTH_1	0.79
PF00589	Phage_integrase	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	3.15

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
All Organisms	root	All Organisms	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
cellular organisms	root	All Organisms → cellular organisms	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	15.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	11.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.36 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	11.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.36 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.79 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	11.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.36 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	0.79 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.79 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.79 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	11.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.36 %
Halioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus	0.79 %
Methylococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus	0.79 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.79 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	11.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.36 %
unclassified Halioglobus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus	0.79 %
unclassified Methylococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus	0.79 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.79 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.84 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	11.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.36 %
Halioglobus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus → Halioglobus sp.	0.79 %
Methylococcus sp. Mc7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp. Mc7	0.79 %
Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	0.79 %
uncultured bacterium CSL12	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401BF4E6	Not Available	510	Open in IMG/M
3300002907\|JGI25613J43889_10135933	All Organisms → cellular organisms → Bacteria → Nitrospirae	629	Open in IMG/M
3300004114\|Ga0062593_100259838	Not Available	1443	Open in IMG/M
3300004463\|Ga0063356_104905361	Not Available	575	Open in IMG/M
3300004463\|Ga0063356_104953373	Not Available	572	Open in IMG/M
3300004479\|Ga0062595_100847184	Not Available	761	Open in IMG/M
3300004480\|Ga0062592_100386016	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300004480\|Ga0062592_100554582	Not Available	964	Open in IMG/M
3300004643\|Ga0062591_100498054	Not Available	1045	Open in IMG/M
3300005093\|Ga0062594_101533010	Not Available	686	Open in IMG/M
3300005288\|Ga0065714_10385211	Not Available	595	Open in IMG/M
3300005290\|Ga0065712_10008236	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300005293\|Ga0065715_10300306	Not Available	1042	Open in IMG/M
3300005331\|Ga0070670_101356512	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005345\|Ga0070692_10646915	Not Available	705	Open in IMG/M
3300005353\|Ga0070669_101153009	Not Available	668	Open in IMG/M
3300005354\|Ga0070675_100232847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1607	Open in IMG/M
3300005354\|Ga0070675_100555666	Not Available	1038	Open in IMG/M
3300005356\|Ga0070674_101207396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Halioglobus → unclassified Halioglobus → Halioglobus sp.	672	Open in IMG/M
3300005364\|Ga0070673_100191168	All Organisms → cellular organisms → Bacteria → Proteobacteria	1758	Open in IMG/M
3300005441\|Ga0070700_100402318	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1030	Open in IMG/M
3300005456\|Ga0070678_100162390	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300005459\|Ga0068867_100140305	Not Available	1888	Open in IMG/M
3300005459\|Ga0068867_100446960	Not Available	1100	Open in IMG/M
3300005539\|Ga0068853_100665839	Not Available	991	Open in IMG/M
3300005548\|Ga0070665_101533275	Not Available	675	Open in IMG/M
3300005841\|Ga0068863_100144663	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300005842\|Ga0068858_102211764	Not Available	544	Open in IMG/M
3300005843\|Ga0068860_100526162	Not Available	1183	Open in IMG/M
3300006237\|Ga0097621_100100988	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300006581\|Ga0074048_11115005	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	563	Open in IMG/M
3300006880\|Ga0075429_101467150	Not Available	594	Open in IMG/M
3300009094\|Ga0111539_10364869	Not Available	1681	Open in IMG/M
3300009148\|Ga0105243_11538942	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	690	Open in IMG/M
3300009156\|Ga0111538_11667781	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300009156\|Ga0111538_13731071	Not Available	527	Open in IMG/M
3300009553\|Ga0105249_11864816	Not Available	674	Open in IMG/M
3300009610\|Ga0105340_1429821	Not Available	589	Open in IMG/M
3300010397\|Ga0134124_11683883	Not Available	666	Open in IMG/M
3300010401\|Ga0134121_10270627	Not Available	1493	Open in IMG/M
3300011119\|Ga0105246_10059835	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300012884\|Ga0157300_1075652	Not Available	579	Open in IMG/M
3300012885\|Ga0157287_1006417	Not Available	1232	Open in IMG/M
3300012893\|Ga0157284_10020022	Not Available	1291	Open in IMG/M
3300012898\|Ga0157293_10029050	Not Available	1098	Open in IMG/M
3300012900\|Ga0157292_10352276	Not Available	544	Open in IMG/M
3300012901\|Ga0157288_10011022	Not Available	1509	Open in IMG/M
3300012901\|Ga0157288_10052660	Not Available	953	Open in IMG/M
3300012902\|Ga0157291_10219950	Not Available	613	Open in IMG/M
3300012903\|Ga0157289_10110454	Not Available	799	Open in IMG/M
3300012904\|Ga0157282_10273388	Not Available	582	Open in IMG/M
3300012906\|Ga0157295_10392533	Not Available	515	Open in IMG/M
3300012908\|Ga0157286_10278966	Not Available	602	Open in IMG/M
3300012912\|Ga0157306_10280750	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	602	Open in IMG/M
3300012944\|Ga0137410_11243225	All Organisms → cellular organisms → Bacteria → Nitrospirae	642	Open in IMG/M
3300012958\|Ga0164299_10532727	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	788	Open in IMG/M
3300012961\|Ga0164302_11330646	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	582	Open in IMG/M
3300013096\|Ga0157307_1106819	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	603	Open in IMG/M
3300013102\|Ga0157371_10802227	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	709	Open in IMG/M
3300013296\|Ga0157374_10517411	Not Available	1199	Open in IMG/M
3300013297\|Ga0157378_10306059	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300013297\|Ga0157378_10461553	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1262	Open in IMG/M
3300013306\|Ga0163162_12707782	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	571	Open in IMG/M
3300013308\|Ga0157375_11893218	Not Available	708	Open in IMG/M
3300013308\|Ga0157375_12605131	All Organisms → cellular organisms → Bacteria → Nitrospirae	604	Open in IMG/M
3300014325\|Ga0163163_12912556	Not Available	534	Open in IMG/M
3300014326\|Ga0157380_11605228	Not Available	706	Open in IMG/M
3300014969\|Ga0157376_10195097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1859	Open in IMG/M
3300014969\|Ga0157376_11724516	Not Available	662	Open in IMG/M
3300015077\|Ga0173483_10069910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22	1393	Open in IMG/M
3300015371\|Ga0132258_11720785	Not Available	1581	Open in IMG/M
3300015373\|Ga0132257_100003749	All Organisms → cellular organisms → Bacteria → Proteobacteria	14185	Open in IMG/M
3300015374\|Ga0132255_100295149	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300017965\|Ga0190266_10009262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2444	Open in IMG/M
3300018031\|Ga0184634_10140657	Not Available	1078	Open in IMG/M
3300018067\|Ga0184611_1061478	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300018067\|Ga0184611_1320467	All Organisms → cellular organisms → Bacteria → Nitrospirae	535	Open in IMG/M
3300018070\|Ga0184631_10262400	Not Available	715	Open in IMG/M
3300018070\|Ga0184631_10349983	Not Available	612	Open in IMG/M
3300018072\|Ga0184635_10114875	Not Available	1069	Open in IMG/M
3300018072\|Ga0184635_10163782	Not Available	888	Open in IMG/M
3300018073\|Ga0184624_10161987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp. Mc7	987	Open in IMG/M
3300018073\|Ga0184624_10381364	Not Available	628	Open in IMG/M
3300018074\|Ga0184640_10486728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300018083\|Ga0184628_10077272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300018476\|Ga0190274_10954135	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300018476\|Ga0190274_12559670	Not Available	607	Open in IMG/M
3300019263\|Ga0184647_1313993	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	605	Open in IMG/M
3300019356\|Ga0173481_10035354	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1633	Open in IMG/M
3300019356\|Ga0173481_10344112	Not Available	710	Open in IMG/M
3300019361\|Ga0173482_10072947	Not Available	1180	Open in IMG/M
3300021082\|Ga0210380_10074048	Not Available	1489	Open in IMG/M
3300021363\|Ga0193699_10486761	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	505	Open in IMG/M
3300022756\|Ga0222622_10105725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1740	Open in IMG/M
3300022886\|Ga0247746_1037532	Not Available	1093	Open in IMG/M
3300022915\|Ga0247790_10165038	Not Available	576	Open in IMG/M
3300025315\|Ga0207697_10319717	Not Available	689	Open in IMG/M
3300025885\|Ga0207653_10409786	Not Available	532	Open in IMG/M
3300025893\|Ga0207682_10128679	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1129	Open in IMG/M
3300025899\|Ga0207642_10782900	Not Available	606	Open in IMG/M
3300025901\|Ga0207688_10158610	Not Available	1340	Open in IMG/M
3300025904\|Ga0207647_10303929	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300025920\|Ga0207649_10336312	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1114	Open in IMG/M
3300025925\|Ga0207650_10185842	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium CSL12	1658	Open in IMG/M
3300025926\|Ga0207659_10417500	Not Available	1125	Open in IMG/M
3300025927\|Ga0207687_11852417	Not Available	516	Open in IMG/M
3300025930\|Ga0207701_10180806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1860	Open in IMG/M
3300025933\|Ga0207706_11710425	Not Available	506	Open in IMG/M
3300025934\|Ga0207686_10590775	Not Available	873	Open in IMG/M
3300025935\|Ga0207709_11833285	Not Available	505	Open in IMG/M
3300025938\|Ga0207704_10128519	Not Available	1749	Open in IMG/M
3300025941\|Ga0207711_10758979	Not Available	904	Open in IMG/M
3300025942\|Ga0207689_10526903	Not Available	991	Open in IMG/M
3300025960\|Ga0207651_10117177	All Organisms → cellular organisms → Bacteria → Proteobacteria	2012	Open in IMG/M
3300026095\|Ga0207676_10034832	All Organisms → cellular organisms → Bacteria → Proteobacteria	3814	Open in IMG/M
3300026116\|Ga0207674_10892253	Not Available	857	Open in IMG/M
3300026320\|Ga0209131_1154395	All Organisms → cellular organisms → Bacteria → Nitrospirae	1154	Open in IMG/M
3300027880\|Ga0209481_10201245	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300028381\|Ga0268264_12208019	Not Available	558	Open in IMG/M
3300028802\|Ga0307503_10161521	Not Available	1027	Open in IMG/M
3300031562\|Ga0310886_10193117	Not Available	1105	Open in IMG/M
3300031854\|Ga0310904_10550687	Not Available	781	Open in IMG/M
3300032003\|Ga0310897_10209086	Not Available	855	Open in IMG/M
3300032122\|Ga0310895_10531404	Not Available	595	Open in IMG/M
3300032174\|Ga0307470_11393075	Not Available	578	Open in IMG/M
3300034149\|Ga0364929_0189850	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300034417\|Ga0364941_020730	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.97%
Host-Associated	Host-Associated	48.03%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.03%
Terrestrial	Environmental → Terrestrial	40.16%
Aquatic	Environmental → Aquatic	11.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.68%
Sediment	Environmental → Aquatic → Sediment	10.24%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Floodplain	Environmental → Terrestrial → Floodplain	1.57%
Roots	Host-Associated → Plants → Roots	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.72%
Loam	Environmental → Terrestrial → Soil → Loam	2.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.57%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.57%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.57%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_07906300	2189573004	Grass Soil	ISLGGVMLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
JGI25613J43889_101359331	3300002907	Grasslands Soil	ISLGGAMISAIGSGRPATDKRREERMSWTRTQPTVAGWYWYRGAYDVHPAGIQKEPVVVFVDTARNGYKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPVE*
Ga0062593_1002598383	3300004114	Soil	MVKRREGRMSWTRIKPTVGGWYRYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWC
Ga0063356_1049053611	3300004463	Arabidopsis Thaliana Rhizosphere	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0063356_1049533731	3300004463	Arabidopsis Thaliana Rhizosphere	MDKKREERTSWTRTKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0062595_1008471842	3300004479	Soil	MLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0062592_1003860162	3300004480	Soil	MVKRREGRMSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0062592_1005545822	3300004480	Soil	MSLGGVMIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0062591_1004980543	3300004643	Soil	MVKRREGRMSWTRIKPTVGGWYRYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0062594_1015330102	3300005093	Soil	PTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0065714_103852113	3300005288	Miscanthus Rhizosphere	KPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0065712_100082364	3300005290	Miscanthus Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0065715_103003062	3300005293	Miscanthus Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDINPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0070670_1013565121	3300005331	Switchgrass Rhizosphere	MIAAVGLTRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE*
Ga0070692_106469151	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MLSAVGLGRPALDKRREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE*
Ga0070669_1011530092	3300005353	Switchgrass Rhizosphere	KPTVAGWYWYRGSYDVNPASVQKEPVIVFVETPRNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPIE*
Ga0070675_1002328475	3300005354	Miscanthus Rhizosphere	YWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0070675_1005556662	3300005354	Miscanthus Rhizosphere	YWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWSGPIPEPVE*
Ga0070674_1012073962	3300005356	Miscanthus Rhizosphere	MLSAVGLERPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0070673_1001911684	3300005364	Switchgrass Rhizosphere	MIAAAGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0070700_1004023181	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0070678_1001623903	3300005456	Miscanthus Rhizosphere	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWC
Ga0068867_1001403054	3300005459	Miscanthus Rhizosphere	MLSAVGLGRPALDKRREQRTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0068867_1004469601	3300005459	Miscanthus Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWC
Ga0068853_1006658392	3300005539	Corn Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIP
Ga0070665_1015332752	3300005548	Switchgrass Rhizosphere	MLSAVGLGRPALDKRREQRTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE*
Ga0068863_1001446631	3300005841	Switchgrass Rhizosphere	SWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0068858_1022117641	3300005842	Switchgrass Rhizosphere	CHSKISLGGVMLSAVGLERPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0068860_1005261622	3300005843	Switchgrass Rhizosphere	MLSAVGLGRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0097621_1001009881	3300006237	Miscanthus Rhizosphere	RTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0074048_111150053	3300006581	Soil	MSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0075429_1014671501	3300006880	Populus Rhizosphere	RRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0111539_103648692	3300009094	Populus Rhizosphere	MIAAVGLARPVLDKRREERISWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0105243_115389421	3300009148	Miscanthus Rhizosphere	MLSAVGLGRPVLDKKREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE*
Ga0111538_116677811	3300009156	Populus Rhizosphere	MIAAVGLARPVLDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETPRNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0111538_137310711	3300009156	Populus Rhizosphere	TRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAGNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0105249_118648162	3300009553	Switchgrass Rhizosphere	EERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPIE*
Ga0105340_14298211	3300009610	Soil	MLSDVGLGRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVIPASVQKEPVIVFVETAQNGHKRTLAGWQPFLNVHLPLSEFTG
Ga0134124_116838831	3300010397	Terrestrial Soil	MLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLSVHLPLSEFTGEWCGPIPEPVE*
Ga0134121_102706271	3300010401	Terrestrial Soil	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNDHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPVE*
Ga0105246_100598352	3300011119	Miscanthus Rhizosphere	MSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0157300_10756521	3300012884	Soil	KKREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAQSGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157287_10064173	3300012885	Soil	MSWTRIKPTVGGWYRYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPG
Ga0157284_100200224	3300012893	Soil	MLSAVGLGRPALEKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157293_100290502	3300012898	Soil	MVKRREGRMSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEW
Ga0157292_103522762	3300012900	Soil	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQQEPVIVFVETARNGHTRTLAGWQPYLNVHLPLSEFTGEWSGPIPEPVE*
Ga0157288_100110221	3300012901	Soil	MLSAVGLGRPALDKRREERTSWTRTTPAVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157288_100526602	3300012901	Soil	MVKRRVERRSWTRIKPTVGGWYRYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPI
Ga0157291_102199502	3300012902	Soil	MIAAVGLTRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAQNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPGD*
Ga0157289_101104542	3300012903	Soil	MIAAAGLGRPALDKRREERNSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157282_102733881	3300012904	Soil	MSWTRIKPTVGGWYRYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0157295_103925331	3300012906	Soil	MIAAVGLTRPALDKRREERATWTRIKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157286_102789661	3300012908	Soil	MSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEW
Ga0157306_102807501	3300012912	Soil	MIAAVGLARPASDKRREERTCWTRTKPTIAGWYWYRGSYDVNPASVQKEPVIVFVETPRNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0137410_112432251	3300012944	Vadose Zone Soil	MISAVELGRPATGKRREERMSWTRTQPTVAGWYWYRGAYDVHPAGIQKEPVVVFVDTARNGYKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPVE*
Ga0164299_105327272	3300012958	Soil	MVKRREGRMSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0164302_113306461	3300012961	Soil	MVKRREGRMSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD*
Ga0157307_11068191	3300013096	Soil	ASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157371_108022271	3300013102	Corn Rhizosphere	MLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFAETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157374_105174112	3300013296	Miscanthus Rhizosphere	MLSAVGLGRPALDKKREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157378_103060591	3300013297	Miscanthus Rhizosphere	MLSAVGLERPALDKRREERMSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAGNGHKRTLAGWQPYLNVHLPLSEFSGEWCGPIPEPVE*
Ga0157378_104615531	3300013297	Miscanthus Rhizosphere	MLSAVGLGRPALDKRREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0163162_127077821	3300013306	Switchgrass Rhizosphere	LTRPALDKRREERATWTRIKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAQNGHKRTLAGWQPFLNVHLPLSEFTGGWCGPIPEPVE*
Ga0157375_118932181	3300013308	Miscanthus Rhizosphere	MIAAVGLTRPALDKRREERATWTRIKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAQNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157375_126051312	3300013308	Miscanthus Rhizosphere	SWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAGNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0163163_129125561	3300014325	Switchgrass Rhizosphere	RREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157380_116052281	3300014326	Switchgrass Rhizosphere	SYTYHGVIIIFSSTLSFLISLGGVMLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157376_101950974	3300014969	Miscanthus Rhizosphere	WYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0157376_117245161	3300014969	Miscanthus Rhizosphere	MDKKQEERMSWTRTKPTVAGWYWYRGAYDVNPAGIQKEPVIVFVETTRNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPAE*
Ga0173483_100699101	3300015077	Soil	RRCHFKIGLGGVMIAAVGLARPVLDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE*
Ga0132258_117207851	3300015371	Arabidopsis Rhizosphere	MLSAVGLGRPALDKRREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0132257_10000374915	3300015373	Arabidopsis Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLSEFTGEWCGPIPEPGD*
Ga0132255_1002951494	3300015374	Arabidopsis Rhizosphere	MLSAIGLRRPALEKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLASWQPYLNVHLPLSEFTGEWCGPIPEPVE*
Ga0190266_100092623	3300017965	Soil	MLSAVDLGRPALVKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAQNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184634_101406571	3300018031	Groundwater Sediment	MLSAVGLARPVLDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPILEPVE
Ga0184611_10614783	3300018067	Groundwater Sediment	MVKRREGRMSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD
Ga0184611_13204671	3300018067	Groundwater Sediment	SWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAGNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184631_102624002	3300018070	Groundwater Sediment	MLSAIGLGRPALEKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184631_103499831	3300018070	Groundwater Sediment	MIKRRVERRSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPI
Ga0184635_101148751	3300018072	Groundwater Sediment	MLSAVDLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGYKRTLAGWQLFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184635_101637822	3300018072	Groundwater Sediment	MVKRREGRMSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPI
Ga0184624_101619872	3300018073	Groundwater Sediment	ALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184624_103813641	3300018073	Groundwater Sediment	MLSAVDLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWSGPIPEPVE
Ga0184640_104867281	3300018074	Groundwater Sediment	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184628_100772723	3300018083	Groundwater Sediment	MSWTRTKPTVAGWYWYRGAYDVNPAGIQKEPVIVFVEIPRNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPI
Ga0190274_109541351	3300018476	Soil	MVKRREERMSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD
Ga0190274_125596701	3300018476	Soil	MLSAVGLGRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0184647_13139931	3300019263	Groundwater Sediment	MSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD
Ga0173481_100353543	3300019356	Soil	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD
Ga0173481_103441121	3300019356	Soil	ILPFSYTYHGVIIIFSSTLPFLISLGGVMLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0173482_100729471	3300019361	Soil	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPI
Ga0210380_100740482	3300021082	Groundwater Sediment	MLSAVGLGRPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE
Ga0193699_104867611	3300021363	Soil	MSWTKAKPTAAGWYWYRGAYDVHPAAIQKEPVIVFVETDRNRRTRTLAGWQQFLNVHAPLSEFTGEWSGPLPEPAE
Ga0222622_101057252	3300022756	Groundwater Sediment	MLSAVGLGHPALDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0247746_10375321	3300022886	Soil	MSWTRIKPTVGGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPG
Ga0247790_101650382	3300022915	Soil	MIAAVGLARPVLDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETPRNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE
Ga0207697_103197171	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MSLGGVMIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207653_104097862	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MVKRREGWMSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIP
Ga0207682_101286791	3300025893	Miscanthus Rhizosphere	MLSAVGLGRPALDKKREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207642_107829001	3300025899	Miscanthus Rhizosphere	MLSAVGLGRPALDKRREERTSWTRTTPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGPIPEPVE
Ga0207688_101586102	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSLGGVMIAAVGLGRPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207647_103039291	3300025904	Corn Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDINPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPSQAISAALSSQI
Ga0207649_103363124	3300025920	Corn Rhizosphere	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVQLPLSEFTGEWCGSIPEPVE
Ga0207650_101858422	3300025925	Switchgrass Rhizosphere	MIAAVGLTRPALDKRREERATWTRIKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETAQNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207659_104175003	3300025926	Miscanthus Rhizosphere	YWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWSGPIPEPVE
Ga0207687_118524171	3300025927	Miscanthus Rhizosphere	PFLISLGGVMLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE
Ga0207701_101808064	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLSAVGLGRPALDKRREQRTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207706_117104251	3300025933	Corn Rhizosphere	GVMLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207686_105907751	3300025934	Miscanthus Rhizosphere	MLSAVGLGRPALDKRREERNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207709_118332851	3300025935	Miscanthus Rhizosphere	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGAYDVNPAGIQKEPVVLFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE
Ga0207704_101285193	3300025938	Miscanthus Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDINPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD
Ga0207711_107589791	3300025941	Switchgrass Rhizosphere	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE
Ga0207689_105269031	3300025942	Miscanthus Rhizosphere	MIAAVGLARPVLDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207651_101171771	3300025960	Switchgrass Rhizosphere	IAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207676_100348321	3300026095	Switchgrass Rhizosphere	LEKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0207674_108922532	3300026116	Corn Rhizosphere	MLSAVGLGRPALGKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPYLNVHLPLSEFTGEWCGPIPEPVE
Ga0209131_11543952	3300026320	Grasslands Soil	MISAIGSGRPATDKRREERMSWTRTQPTVAGWYWYRGAYDVHPAGIQKEPVVVFVDTARNGYKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPVE
Ga0209481_102012451	3300027880	Populus Rhizosphere	MVKRRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGDKCST
Ga0268264_122080192	3300028381	Switchgrass Rhizosphere	GWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0307503_101615212	3300028802	Soil	RNSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0310886_101931171	3300031562	Soil	MVKRREGRMSWTRIKPTVGGWYRYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD
Ga0310904_105506871	3300031854	Soil	MSLGGVMIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWC
Ga0310897_102090861	3300032003	Soil	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPGD
Ga0310895_105314042	3300032122	Soil	FKMSLGGVMIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEPVE
Ga0307470_113930751	3300032174	Hardwood Forest Soil	KAKPTAAGWYWYRGAYDVHPAAIQKEPVIVFVETAQNRHTRTLAGWQPFLNVHVPLSEFTGEWSGPVPEPVE
Ga0364929_0189850_398_676	3300034149	Sediment	MIAAVGLARPASDKRREERTSWTRTKPTVAGWYWYRGSYDVNPASVQKEPVIVFVETARNGHKRTLAGWQPFLNVHLPLSEFTGEWCGPIPEP
Ga0364941_020730_650_904	3300034417	Sediment	MVKSRVERRSWTRIKPTVAGWYWYRGAYDVNPAGIQKEPVVVFVETARNGHKKTLAGWQPFLNVHVPLTEFTGEWCGPIPEPGD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065886

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign