Metagenome Family F065872

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065872
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	91 residues
Representative Sequence	MRTETFQTPGETRLDIRLGSGEVRLETAEVQETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLV
Number of Associated Samples	116
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.49 %
% of genes near scaffold ends (potentially truncated)	97.64 %
% of genes from short scaffolds (< 2000 bps)	92.13 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.929 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.047 % of family members)
Environment Ontology (ENVO)	Unclassified (32.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.882 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.96% β-sheet: 42.48% Coil/Unstructured: 49.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.22.1.0: automated matches	d3gb3a_	3gb3	0.53577
b.97.1.1: Anemone pore-forming cytolysin	d1gwya_	1gwy	0.53373
d.22.1.0: automated matches	d6m9za_	6m9z	0.53109
d.15.6.0: automated matches	d2rdha2	2rdh	0.52555
d.129.3.0: automated matches	d3gzya2	3gzy	0.52057

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF05534	HicB	66.14
PF01464	SLT	10.24
PF01121	CoaE	3.94
PF00575	S1	2.36
PF00106	adh_short	0.79
PF13349	DUF4097	0.79
PF01590	GAF	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	66.14
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	66.14
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	3.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.93 %
Unclassified	root	N/A	33.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.93 %
Unclassified	root	N/A	33.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.93 %
Unclassified	root	N/A	33.07 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.69 %
Unclassified	root	N/A	33.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.36 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56.69 %
Unclassified	root	N/A	33.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.07 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.81 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.07 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.36 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.07 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.36 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.57 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.07 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.57 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.79 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.07 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.57 %
Agrobacterium tumefaciens complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex	0.79 %
unclassified Modestobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.07 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.57 %
Modestobacter sp. DSM 44400	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	0.79 %
Agrobacterium tumefaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex → Agrobacterium tumefaciens	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0837307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300000956\|JGI10216J12902_105249280	Not Available	562	Open in IMG/M
3300004081\|Ga0063454_100161150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300004156\|Ga0062589_101638850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	639	Open in IMG/M
3300004479\|Ga0062595_100758469	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300004479\|Ga0062595_101702051	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005330\|Ga0070690_100764925	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005337\|Ga0070682_101697102	Not Available	549	Open in IMG/M
3300005339\|Ga0070660_100642349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300005341\|Ga0070691_10654415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300005355\|Ga0070671_100931277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300005365\|Ga0070688_100426579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	987	Open in IMG/M
3300005366\|Ga0070659_101978531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300005441\|Ga0070700_100127389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1713	Open in IMG/M
3300005444\|Ga0070694_100581981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300005451\|Ga0066681_10293855	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005457\|Ga0070662_100292608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300005457\|Ga0070662_101376987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300005466\|Ga0070685_10305336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1074	Open in IMG/M
3300005466\|Ga0070685_11425742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium tumefaciens complex → Agrobacterium tumefaciens	532	Open in IMG/M
3300005526\|Ga0073909_10108092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300005526\|Ga0073909_10457944	Not Available	611	Open in IMG/M
3300005535\|Ga0070684_101277769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300005546\|Ga0070696_100620378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	874	Open in IMG/M
3300005587\|Ga0066654_10932840	Not Available	500	Open in IMG/M
3300005598\|Ga0066706_10426511	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300005614\|Ga0068856_100163023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2240	Open in IMG/M
3300005615\|Ga0070702_100842777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	713	Open in IMG/M
3300005617\|Ga0068859_102103756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300005840\|Ga0068870_10891337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	628	Open in IMG/M
3300005886\|Ga0075286_1013149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	994	Open in IMG/M
3300006028\|Ga0070717_10374828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300006028\|Ga0070717_11409483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300006046\|Ga0066652_100558126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300006046\|Ga0066652_101684288	Not Available	579	Open in IMG/M
3300006237\|Ga0097621_100969171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	794	Open in IMG/M
3300006755\|Ga0079222_11250267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300006806\|Ga0079220_10635410	Not Available	768	Open in IMG/M
3300006844\|Ga0075428_100679249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300006871\|Ga0075434_101575105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300006881\|Ga0068865_101720821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300009012\|Ga0066710_100339291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2217	Open in IMG/M
3300009093\|Ga0105240_12159640	Not Available	578	Open in IMG/M
3300009100\|Ga0075418_10188590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2196	Open in IMG/M
3300009176\|Ga0105242_10247400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1605	Open in IMG/M
3300009177\|Ga0105248_10273657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300009551\|Ga0105238_12659612	Not Available	537	Open in IMG/M
3300009553\|Ga0105249_11345385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300010038\|Ga0126315_10878792	Not Available	595	Open in IMG/M
3300010041\|Ga0126312_10044928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2956	Open in IMG/M
3300010043\|Ga0126380_10083895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300010045\|Ga0126311_10298497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1212	Open in IMG/M
3300010337\|Ga0134062_10085468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1336	Open in IMG/M
3300010399\|Ga0134127_10253791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1668	Open in IMG/M
3300010399\|Ga0134127_10666912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300010999\|Ga0138505_100060722	Not Available	553	Open in IMG/M
3300012212\|Ga0150985_106364755	Not Available	653	Open in IMG/M
3300012469\|Ga0150984_117706692	Not Available	689	Open in IMG/M
3300012901\|Ga0157288_10014579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1392	Open in IMG/M
3300012901\|Ga0157288_10402356	Not Available	512	Open in IMG/M
3300012901\|Ga0157288_10428856	Not Available	502	Open in IMG/M
3300012902\|Ga0157291_10369446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	521	Open in IMG/M
3300012910\|Ga0157308_10044207	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300012948\|Ga0126375_11966473	Not Available	515	Open in IMG/M
3300012955\|Ga0164298_11255593	Not Available	565	Open in IMG/M
3300012957\|Ga0164303_10684924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300012958\|Ga0164299_11351577	Not Available	548	Open in IMG/M
3300012960\|Ga0164301_10123247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1535	Open in IMG/M
3300012961\|Ga0164302_10687371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300012985\|Ga0164308_10781737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300012987\|Ga0164307_10114098	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300013307\|Ga0157372_12867987	Not Available	552	Open in IMG/M
3300014326\|Ga0157380_10622543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300014497\|Ga0182008_10412397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300015356\|Ga0134073_10103109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300018056\|Ga0184623_10486228	Not Available	529	Open in IMG/M
3300018061\|Ga0184619_10113228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300018081\|Ga0184625_10158242	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300018081\|Ga0184625_10223679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
3300023067\|Ga0247743_1009473	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300023069\|Ga0247751_1017842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1096	Open in IMG/M
3300023072\|Ga0247799_1014100	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300025711\|Ga0207696_1119625	Not Available	711	Open in IMG/M
3300025898\|Ga0207692_10030137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2584	Open in IMG/M
3300025903\|Ga0207680_11187531	Not Available	544	Open in IMG/M
3300025908\|Ga0207643_10122875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1539	Open in IMG/M
3300025911\|Ga0207654_10140244	Not Available	1541	Open in IMG/M
3300025912\|Ga0207707_11546824	Not Available	524	Open in IMG/M
3300025917\|Ga0207660_10602096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300025927\|Ga0207687_11656752	Not Available	549	Open in IMG/M
3300025932\|Ga0207690_11571645	Not Available	550	Open in IMG/M
3300025933\|Ga0207706_10932219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300025934\|Ga0207686_10453396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300025940\|Ga0207691_10391241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300025944\|Ga0207661_10567531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300025949\|Ga0207667_10378498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1442	Open in IMG/M
3300025961\|Ga0207712_10607987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300026067\|Ga0207678_10551743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300027821\|Ga0209811_10019077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2233	Open in IMG/M
3300027876\|Ga0209974_10111724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300028145\|Ga0247663_1056566	Not Available	668	Open in IMG/M
3300028380\|Ga0268265_12190023	Not Available	560	Open in IMG/M
3300028587\|Ga0247828_11223890	Not Available	504	Open in IMG/M
3300028710\|Ga0307322_10136426	Not Available	648	Open in IMG/M
3300028714\|Ga0307309_10142331	Not Available	601	Open in IMG/M
3300028718\|Ga0307307_10110635	Not Available	843	Open in IMG/M
3300028720\|Ga0307317_10119799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300028782\|Ga0307306_10173147	Not Available	609	Open in IMG/M
3300028784\|Ga0307282_10399876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300028791\|Ga0307290_10046606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1559	Open in IMG/M
3300028791\|Ga0307290_10374543	Not Available	521	Open in IMG/M
3300028814\|Ga0307302_10025888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2679	Open in IMG/M
3300028824\|Ga0307310_10600992	Not Available	560	Open in IMG/M
3300028828\|Ga0307312_10011391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4904	Open in IMG/M
3300028875\|Ga0307289_10014673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3004	Open in IMG/M
3300028881\|Ga0307277_10355765	Not Available	652	Open in IMG/M
3300028885\|Ga0307304_10522035	Not Available	545	Open in IMG/M
3300030511\|Ga0268241_10081858	Not Available	729	Open in IMG/M
3300031184\|Ga0307499_10224913	Not Available	588	Open in IMG/M
3300031199\|Ga0307495_10068048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300031731\|Ga0307405_12022764	Not Available	516	Open in IMG/M
3300031740\|Ga0307468_100043759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2274	Open in IMG/M
3300031852\|Ga0307410_12057694	Not Available	510	Open in IMG/M
3300031858\|Ga0310892_10342505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300031995\|Ga0307409_100486745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1198	Open in IMG/M
3300032002\|Ga0307416_102514918	Not Available	613	Open in IMG/M
3300032003\|Ga0310897_10212430	Not Available	849	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.72%
Host-Associated	Host-Associated	32.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.57%
Plants	Host-Associated → Plants	32.28%
Aquatic	Environmental → Aquatic	3.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.09%
Sediment	Environmental → Aquatic → Sediment	3.15%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.75%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.66%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.15%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.15%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.15%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08373073	2228664021	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVTETKVVLEPLRNNDASTAAVASARIELRERGGGHEVVIDARDRGRGLFRNAE
JGI10216J12902_1052492802	3300000956	Soil	VLAVRTETFETPGDVRLNIRLGAGEIRLETGDVKQTTVTLEPLRDNESSAAAVEGARVELRQRGGGHEVIVDVRDRAKGFGFF
Ga0063454_1001611503	3300004081	Soil	VRTETFETPGDVRLDVRLGAGEIRIETGEAQQTAVRLEPLRDNDATRAAVEGARVELRERGGGFEVLVDARDRQRGFGRSAE
Ga0062589_1016388501	3300004156	Soil	MRSETFETPGEVRLDVRLGAGEVRLETAEVGETTVTLEPLRDNDASRAAVENARIELRQRGGGHEVVVDVRDRGR
Ga0062595_1007584692	3300004479	Soil	MRTETFQTPGETRLDIRLGAGEVRLESAEVQETTVVLEPLRGNDASTAAIENARVELRDRGKGHEVVIDVRDRGRGLFRNAEVLVSVTCPDGTSVETKSGSADI
Ga0062595_1017020511	3300004479	Soil	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVALEPLRDNDATASAIENARVELRDRGDGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVETKSGSAGVEGRGRFGSVEVET
Ga0070690_1007649252	3300005330	Switchgrass Rhizosphere	MRTESFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSGSAD
Ga0070682_1016971021	3300005337	Corn Rhizosphere	MRTESFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVID
Ga0070660_1006423491	3300005339	Corn Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTC
Ga0070691_106544152	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVID
Ga0070671_1009312772	3300005355	Switchgrass Rhizosphere	MRTETFDTPGEVRLDIRLGAGEVRLETADVQQTTVLLEPLRDNDASAAAVESARVEVRQRGDGHEVVIDARDRGRGIFRSAQLLVAVTCPEGASVESKT
Ga0070688_1004265792	3300005365	Switchgrass Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGAEVLVSVTSPEGTSVESKTGSAEVEGRGRFGSVEVETGSGD
Ga0070659_1019785311	3300005366	Corn Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFS
Ga0070700_1001273894	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSGSA
Ga0070694_1005819812	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPE
Ga0066681_102938553	3300005451	Soil	VRTETFETPGSVRFNIRVGAGEIRLETADVTETTVRLESLRNSERVVENARVELRQRGEGHEVIVDVRDRG
Ga0070662_1002926081	3300005457	Corn Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSV
Ga0070662_1013769872	3300005457	Corn Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGAEV
Ga0070685_103053363	3300005466	Switchgrass Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGF
Ga0070685_114257421	3300005466	Switchgrass Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVVLEPLRDNEASTGAVENARVELRDRGNGHEVVIDVRDRGRGFSLSRGAEVLVTVTGPEGTSVESKSG
Ga0073909_101080924	3300005526	Surface Soil	MRTESFQTPGETRLDIRLGAGEVRLESAEVQETTVVLEPLRDNDASKAAVESARVDLRDRGTGHEVVIDVRDR
Ga0073909_104579442	3300005526	Surface Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAIENARVELRDRGNGHEVVIDVRDRGRGFSLSRGAEVLVAVTAPEGTSVESKSGSADIEGHGRFGSVE
Ga0070684_1012777692	3300005535	Corn Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGAEVLVSVTSPEGTSVE
Ga0070696_1006203781	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLV
Ga0066654_109328402	3300005587	Soil	VRTESFQTPGETRLDIRLGSGEVRLETAEVQETTVVLEPLRDNDASAAAIENARLELRERGDGHEVVIDVRDRGRGLFRNAEVLIAVTCPDGASV
Ga0066706_104265111	3300005598	Soil	MRTETFETPGPVRFNVRLGAGEIRFETADVQETTVTLEALRDSEAGEAVIQNARVELRARGDGHEVIVDVRDRGRGIGLFRGSDVLVEIR
Ga0068856_1001630231	3300005614	Corn Rhizosphere	MRTETFRTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGVDVLVAVTTPEGTSVE
Ga0070702_1008427772	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLVAV
Ga0068859_1021037561	3300005617	Switchgrass Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGAEVLVSVTSPEGTSVESKT
Ga0068870_108913372	3300005840	Miscanthus Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAEVLVAVTSPTETSVE*
Ga0075286_10131492	3300005886	Rice Paddy Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRGNDASTAAVENARVELRDRGNGHEVVIDVRDRGRGIFRNAEVLVAVTSPEGTSVETKSGSADVEGRGRFG
Ga0070717_103748281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAEVLVAVTSPTETSVESKTGSAEVVGRGVFGS
Ga0070717_114094831	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRAETFDTPGEVRLDIRLGAGEVRLETADVSETTVVLEPLRDNDASSAAVEKARVELRERGGGYQVLVDVRDR
Ga0066652_1005581263	3300006046	Soil	VLAVRTETFETPGDVRLNIRLGAGEIRLETGDVKQTTVTLEPLRDNESSAAAVEGARVELRQRGGGHEVVVDVRDRAKGFGFF
Ga0066652_1016842881	3300006046	Soil	VRTETFDTPGEVRLDIRLGAGEIRLETGEVKQTTVSLEPMRDNDASLAAVENARLELRERGELHEIVIDVRDRGKG
Ga0097621_1009691712	3300006237	Miscanthus Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDV
Ga0079222_112502671	3300006755	Agricultural Soil	MRTETFHTPGDTRLDIRLGAGEVRLETAETQETTVELEALRGDDASKAAVEDARVEVHGRGDGHEVVVDVRGRGLFKSADVLVVVRCPEGTSIESKTGSA
Ga0079220_106354102	3300006806	Agricultural Soil	MRTETFETPGEVRLDIRLGAGEVRLETADVKETTVVLEPLRDNDASNAAIEKARLELRERGGAHEVVVDVRDRGGIFRNAEVLVAVTSPEGTSVESKT
Ga0075428_1006792491	3300006844	Populus Rhizosphere	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVASARIELRERGGGHEVVIDARDRG
Ga0075434_1015751052	3300006871	Populus Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVL
Ga0068865_1017208212	3300006881	Miscanthus Rhizosphere	MRTESFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSGSADIEGHGRFGS
Ga0066710_1003392911	3300009012	Grasslands Soil	MRTETFETPGPVRFNVRLGAGEIRFETADVRETTVTLEALRDSEAGEAVIQNARVELRARGDGHEVIVDVRDRGRGIGLFRGSDVLVEIRGPDGA
Ga0105240_121596402	3300009093	Corn Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDLRDRGRGFGFSKGADVLVAVTTPEGTSVETKTGSAEVEG
Ga0075418_101885901	3300009100	Populus Rhizosphere	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVASARIELRERGGGHEVVIDARDRGRGL
Ga0105242_102474005	3300009176	Miscanthus Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLVVVTSPEGTSVET
Ga0105248_102736574	3300009177	Switchgrass Rhizosphere	MPAAERRSTLRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASSAAVEKARVELRERGGGYQVLVDVRDRGGIFRNAEVLVAVTS
Ga0105238_126596122	3300009551	Corn Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLVAVTSPEG
Ga0105249_113453852	3300009553	Switchgrass Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSGSADIEG
Ga0126315_108787921	3300010038	Serpentine Soil	VRTETFQTPGPVHLDIRLGAGEVALETAATTGTTVVLEPLRNNEASVEAVEHARVELRGSGDGREVVIDVRGRSRFFKGAEVLVRVTCPFESGVEIRSGSADIEGRGVFG
Ga0126312_100449281	3300010041	Serpentine Soil	VRTETFETPGELRVEVRLGAGEVRLETADVQETTVVLEPLRDNDASIAAVESARVELRERAGGHELVIDARDRGRGIFRN
Ga0126380_100838954	3300010043	Tropical Forest Soil	MRTETFDTPGEVRLDIRLGAGEVRLETSNVRETTVVLEPLRDNDASNAAVEKARVELRERGGGHQVLVDVRDRGGLFRSAEVLIAVTSPEGT
Ga0126311_102984974	3300010045	Serpentine Soil	VRTETFQTPGDVRLDVRLGAGEVRIETADVQETTVVLEPLRDNDASTAAVANARVEQRERGGGHEVIVDARDRGRGIFRHAEVLVTVTSPDGSQDIDLLLEPN
Ga0134062_100854681	3300010337	Grasslands Soil	VRTETFETPGSVRFNIRVGAGEIRLETADVTETTVRLESLRNSERVVENARIELRQRGEGHEVLVDVRDRGRGRGNDV
Ga0134127_102537911	3300010399	Terrestrial Soil	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSG
Ga0134127_106669123	3300010399	Terrestrial Soil	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLVAVTSPEGTSVETKT
Ga0138505_1000607221	3300010999	Soil	VRTETFRTPGKVRLDIRLGAGEIRVETSDVQQTTVVLEPLRDNDSSTAAVTNARVELRERADGHEVVIDVRDRGKGLGIFRGAEVLV
Ga0150985_1063647551	3300012212	Avena Fatua Rhizosphere	MRSETFQTPGDTRLDIRLGSGEVHLETAEVQETTVVLEPLRDNDASAAAIENARLELRDRGEGHEVVIDVRDRGRGIFRNAEVLIAVTCPEGA
Ga0150984_1177066921	3300012469	Avena Fatua Rhizosphere	MRSETFQTPGDTRLDIRLGSGEVRLETAEVQETTVVLEPLRDNDASAAAIENARLELRDRGEGHEVVIDVRDRGRGIFRNAEVLIAVTEM
Ga0157288_100145794	3300012901	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNSPHGTSVESKTGSADITGHGRF
Ga0157288_104023562	3300012901	Soil	MRTETFQTPGETRLDIRLGAGEVRLETAEVSETTVVLEPLRDNDASRSAIENARVELRGRGDGHEVVID
Ga0157288_104288561	3300012901	Soil	VRTETFQTPGDLRLEVRLGAGEVRLETADVQETTVVLEPLRDNDASTAAVANARVELRERGSGHELVVDARDRGRALFRSAEVLVSVSCPTGTSVETKSGSADITGRGRF
Ga0157291_103694462	3300012902	Soil	VRTETFQTPGDLRLEVRLGAGEVRLETADVQETTVVLEPLRDNDASTAAVANARVELRERGSGHELVVDARDRGR
Ga0157308_100442073	3300012910	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNSP
Ga0126375_119664732	3300012948	Tropical Forest Soil	VRTETFETPGDVRLEIRLGAGEVRLDTADVKETKVVLEPLRDNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVAVKSPHGTGVES
Ga0164298_112555932	3300012955	Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAIENARVELRDRGNGHEVVIDVRDRGRGFSLSRGAEVLVAVTAPEGTSVESKSGSADI
Ga0164303_106849241	3300012957	Soil	MRTETFQTPGETRLDIRLGSGEVRLETAEVQETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRG
Ga0164299_113515771	3300012958	Soil	MRTETFQTPGETRLDIRLGSGEVRLETAEVQETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLV
Ga0164301_101232471	3300012960	Soil	MRTETFQTPGETRLDIRLGSGEVRLETAEVQETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVETKSGSAGVEGRGRFGSVEV
Ga0164302_106873712	3300012961	Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAIENARVELRDRGNGHEVVIDVRDRGRGFSLSRGAEVLVAV
Ga0164308_107817371	3300012985	Soil	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRD
Ga0164307_101140981	3300012987	Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAIENARVELRDRGNGHEVVIDV
Ga0157372_128679872	3300013307	Corn Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSK
Ga0157380_106225433	3300014326	Switchgrass Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLVVVTSPEGTSVETKTGS
Ga0182008_104123971	3300014497	Rhizosphere	MPAAERRSTLRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSK
Ga0134073_101031092	3300015356	Grasslands Soil	MRTETFQTPGEVRLDVRLGSGEIRLETADTAETTVTLEPLRDNEASATAVAEARVELRGQEVVVDVRDRRRGSPR
Ga0184623_104862283	3300018056	Groundwater Sediment	MRTETFQTPGPVQLDIRLGAGEISLETADVGETTVVLEPLRDNEASLEAVQTARIELRERAGGQEVVVDVRGRSRFFRGAE
Ga0184619_101132281	3300018061	Groundwater Sediment	VRRETFQTPGQVWLEVRLGAGAIRVETEDVQETTVVLEPLRDNDASTAAVSNARIELRERAGGHEVVVDVRDRG
Ga0184625_101582421	3300018081	Groundwater Sediment	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVASARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNSPHGT
Ga0184625_102236791	3300018081	Groundwater Sediment	VRTETFETPGEVRLDVRLGAGEIRLETGDGNETTVVLEPLRDNDASRNAVEGARVELRERSGGFDVVVDARDRQRGF
Ga0247743_10094731	3300023067	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNSPHGTSVESKTGSADIT
Ga0247751_10178421	3300023069	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARD
Ga0247799_10141001	3300023072	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNSPHGTSVESKT
Ga0207696_11196253	3300025711	Switchgrass Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTS
Ga0207692_100301371	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRTETFDTPGEVRLDIRLGAGEVRLETADVSETTVVLEPLRDNDASSAAVEKARVELRERGGGYQVLVDVRDRGGIFRNAEVLVAVTSPEGTSV
Ga0207680_111875311	3300025903	Switchgrass Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAEVLVAVTSPTETSVESKTGSAEVVGR
Ga0207643_101228752	3300025908	Miscanthus Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAEVLVAVTSPTETSVE
Ga0207654_101402444	3300025911	Corn Rhizosphere	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAEVLVAVT
Ga0207707_115468241	3300025912	Corn Rhizosphere	MRTESFQTPDETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSV
Ga0207660_106020962	3300025917	Corn Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSG
Ga0207687_116567522	3300025927	Miscanthus Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASKAAVENARVELRDRGKGHEVVIDVRDRGRGIFRNAEVLVSVTCPEGTSVESKSGSADIEGHGRFGSVEV
Ga0207690_115716452	3300025932	Corn Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRD
Ga0207706_109322191	3300025933	Corn Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGAEVLV
Ga0207686_104533961	3300025934	Miscanthus Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVLLEPLRDNDATQAAIENARVELRERGSGHEVVIDVRDRGRGFGFSKGADVLVVVTSPEGTS
Ga0207691_103912413	3300025940	Miscanthus Rhizosphere	LRTESFQTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGA
Ga0207661_105675313	3300025944	Corn Rhizosphere	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVVLEPLRDNDASQAAIENARVELRERGGGHEVVIDVRDRGRGFGFSKGADVLVAVTSP
Ga0207667_103784981	3300025949	Corn Rhizosphere	MRTDSFQTPGETRLDIRLGAGEVRLESAEVEETTVVLEPLRDNDASTAAVENARVELRDRGKGHEVVIDVRDRG
Ga0207712_106079873	3300025961	Switchgrass Rhizosphere	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGR
Ga0207678_105517431	3300026067	Corn Rhizosphere	MRTETFRTPGETRLDIRLGAGEVRLETAEVNETTVVLEPLRDNDASKAAVENARVELRERGGGREVVIDVRDRGRGFGFSKGADVLVSVTSPEGTSVESKTGSAEVE
Ga0209811_100190771	3300027821	Surface Soil	MRTESFQTPGETRLDIRLGAGEVRLESAEVQETTVVLEPLRDNDASKAAVESARVDLRDRGTGHEVVIDVRDRRGRKAEVLV
Ga0209974_101117242	3300027876	Arabidopsis Thaliana Rhizosphere	VRTETFETPGDVRLEIRLGAGEVRVDPADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVTVYGVR
Ga0247663_10565662	3300028145	Soil	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAE
Ga0268265_121900231	3300028380	Switchgrass Rhizosphere	VRTETFETPGDVRLEIRLSAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNSPHGTSVESKTGSANITGHGRFGAVEVETGS
Ga0247828_112238901	3300028587	Soil	LRTETFETPGDLRLDIRLGAGEVRLETADIAETTVVLEPLRDNDASTAAVANARVELRERAGGHEVIVDARDRGRGIFRNAEVLVAVTCPE
Ga0307322_101364262	3300028710	Soil	VRTEIFRTPGKVRLDIRLGAGEIRVETSDVQETTVVLEPLRDNDSSTAAVTNARVELRERADGHEVVIDVRDRGKSLGIFRGAEVLVSVTCPDGVSVESKSGSADVTGGGRFGSVE
Ga0307309_101423312	3300028714	Soil	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVVLEPLRGNDASTAAVENARVELRDRGNGHEVVIDVRDRGRGIFRNAEVLVAVTSPEGTSVETKSGSADVEGRGRFGSV
Ga0307307_101106352	3300028718	Soil	VRTEIFRTPGKVRLDIRLGAGEIRVETSDVQETTVVLEPLRDNDSSTAAVTNARVELRERADGHEVVIDVRDRG
Ga0307317_101197991	3300028720	Soil	MRTETFQTPGETRIDIRLGAGEIRVETAEVQETTVVLEPLRDNESSVAAVENARVELRDRGNGHEIVIDVRDRARGLGIFRGAEVLVA
Ga0307306_101731472	3300028782	Soil	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVVLEPLRGNDASTAAVENARVELRDRGNGHEVVIDVRDRGRGIFRNAEVLVA
Ga0307282_103998762	3300028784	Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAVENARVELRDRGNGHEVVIDVRDRGRGFSLSR
Ga0307290_100466061	3300028791	Soil	VRTETFQTPGKVRLDIRLGAGEVRLETADVKETTVVLEPLRDNDSSTAAVANARVELRERREGQDVVIDVRERGKGLGLFRGAEVLINVACPDGAGVESKTGSADVRGGGHFG
Ga0307290_103745431	3300028791	Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAVENARVELRDRGNGHEVVIDVRDRGRGFSLSRGAEVLVAVTSPEGTSVESKSGSADIEGHGRFGSV
Ga0307302_100258881	3300028814	Soil	VRTETFETPGEVRLDVRLGAGEIRLETGDGNETTVVLEPLRDNDASRNAVEGARVELRERSGGFDVVVDARDRQRGFGLGRGAEVLVEIRAPDGVSVNSKSGSADIEGNGRFGAVDVET
Ga0307310_106009922	3300028824	Soil	VRTETFQTPGAVRLDIKLGAGEVRLETADVQETTVVLEPLRDNDSSAAAVENARVELRERGDGHEVVIDVRDRGRGIFSNSEVLVAVTSPEGTSVEAKTGSANVEGRGRFGSVEVET
Ga0307312_100113911	3300028828	Soil	MRTETFQTPGETRLDIRLGAGEIRVETAEVQETTVVLEPLRDNDASAAAVENARVELRERGSGHEVLVDARDRGRGIFRNAEVLIVVTAPEGTSVESKSGSADVEGRGR
Ga0307289_100146736	3300028875	Soil	MRTETFQTPGETRLDIRLGAGEIRVETAEVQETTVVLEPLRDNDASAAAVENARVELRERGSGHEVLVDARDRGRGIFRNAEVLIVVTAPEGTS
Ga0307277_103557651	3300028881	Soil	VRTETFRTPGKVRLDIRLGAGEIRVETSDVQETTVALEPLRDNDSSTAAVTNARVELRERADGHEVVIDVRDRGKGLGIFRGAEVLVSVTCPDGVSVESKSGSADVVGRGRFG
Ga0307304_105220352	3300028885	Soil	MRTETFQTPGETRLDIRLGAGEVRLETAEVQETTVVLEPLRGNDASTAAVENARVELRDRGNGHEVVIDVRDRGRGIFRNAEVLVAVTSPEGTSVETKSGSADV
Ga0268241_100818581	3300030511	Soil	VRTETFGTPGSVRLDIRLGAGEVRLETSDAQETTVVLEPLRANDASQAAVENARVELRERGGGHEVVIDARDRG
Ga0307499_102249131	3300031184	Soil	MRTETFQTPGETRLDIRLGAGEVRIETAEVQETTVVLEPLRDNEASTSAIENARVELRDRGNGHEVVIDVRDRGRGFSLSRGA
Ga0307495_100680482	3300031199	Soil	MRTETFQTPGETRLDIRLGAGEIRVETAEVQETTVVLEPLRDNESSTAAVENARVELRDRGDGHEIVIDVRDRARGLGIFRGAEVLVAVTSPEGTSVET
Ga0307405_120227642	3300031731	Rhizosphere	VRTETFQTPGDVRLDVRLGAGEVRIETADVQETTVVLEPLRDNDASTAAVANARVELRERGGGHEVIVDARD
Ga0307468_1000437596	3300031740	Hardwood Forest Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHEVVIDARDRGRGLFRNAEVLVTVNS
Ga0307410_120576943	3300031852	Rhizosphere	VRTESFQTPGPVKLDLRLGAGEISVETAEVQETTVVLEPLRDNDATMASIANARVELRERAGGQEVAVDVRTRGRGLSR
Ga0310892_103425052	3300031858	Soil	VRTETFETPGDVRLEIRLGAGEVRVDTADVKETKVVLEPLRNNDASTAAVANARIELRERGGGHVVVIDARDRGRGLFRNA
Ga0307409_1004867454	3300031995	Rhizosphere	VRTETFQTPGDVRLDVRLGAGEVRIETADVQETTVVLEPLRDNDASTAAVANARVEQRERGGGHEVIVDARDRGRGIFRHAEVLVTVTSPDGTSVETK
Ga0307416_1025149183	3300032002	Rhizosphere	VRTESFQTPGPVKLDLRLGAGEISVETAEVQETTVVLEPLRDNDATMASIANARVELRERAGGQEVAVDVRTRG
Ga0310897_102124301	3300032003	Soil	MRTETFETPGDVRLDIKLGAGEIRLETADVKETTVVLEPLRDNDASSAAIEKARVELRERGDGQQVVIDVRDRGGIFRHAEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065872

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences