Metagenome / Metatranscriptome Family F065867

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065867
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	95 residues
Representative Sequence	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKT
Number of Associated Samples	113
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.20 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	96.85 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.425 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.409 % of family members)
Environment Ontology (ENVO)	Unclassified (33.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.307 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.17% β-sheet: 0.00% Coil/Unstructured: 45.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01979	Amidohydro_1	17.32
PF04199	Cyclase	2.36
PF16751	RsdA_SigD_bd	1.57
PF13147	Obsolete Pfam Family	0.79
PF07969	Amidohydro_3	0.79
PF05067	Mn_catalase	0.79
PF00085	Thioredoxin	0.79
PF00480	ROK	0.79
PF00353	HemolysinCabind	0.79
PF00089	Trypsin	0.79
PF03713	DUF305	0.79
PF13302	Acetyltransf_3	0.79
PF06863	DUF1254	0.79
PF07690	MFS_1	0.79
PF03724	META	0.79
PF04261	Dyp_perox	0.79
PF12850	Metallophos_2	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.36
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.57
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.79
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.79
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	0.79
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.43 %
Unclassified	root	N/A	1.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.43 %
Unclassified	root	N/A	1.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.43 %
Unclassified	root	N/A	1.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.57 %
Unclassified	root	N/A	1.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.57 %
Unclassified	root	N/A	1.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.54 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Unclassified	root	N/A	1.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	16.54 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Unclassified	root	N/A	1.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16.54 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.57 %
Unclassified	root	N/A	1.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103957958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300001536\|A1565W1_10022558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300001538\|A10PFW1_12066941	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300001566\|A2135W6_1352220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300001978\|JGI24747J21853_1009116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300004081\|Ga0063454_101168297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300004114\|Ga0062593_100346693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1296	Open in IMG/M
3300004156\|Ga0062589_102882523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300004157\|Ga0062590_101930006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300004463\|Ga0063356_101774803	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300004463\|Ga0063356_105663994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300004479\|Ga0062595_100020782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2477	Open in IMG/M
3300004480\|Ga0062592_100512779	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300005159\|Ga0066808_1025590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300005174\|Ga0066680_10894035	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005336\|Ga0070680_101613165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	562	Open in IMG/M
3300005340\|Ga0070689_100686483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300005343\|Ga0070687_100235103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300005345\|Ga0070692_10688470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	686	Open in IMG/M
3300005355\|Ga0070671_101112136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300005364\|Ga0070673_100874165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300005439\|Ga0070711_100253561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1381	Open in IMG/M
3300005440\|Ga0070705_100326067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300005445\|Ga0070708_101079577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300005447\|Ga0066689_10092589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300005456\|Ga0070678_100664656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300005526\|Ga0073909_10154471	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005536\|Ga0070697_100727762	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005537\|Ga0070730_10592395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300005555\|Ga0066692_10921880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005556\|Ga0066707_10180514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300005558\|Ga0066698_11003838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300005719\|Ga0068861_101756936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300005841\|Ga0068863_101900020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300005841\|Ga0068863_102718886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300006051\|Ga0075364_10295669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1102	Open in IMG/M
3300006237\|Ga0097621_101982476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300006575\|Ga0074053_10017291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300006605\|Ga0074057_10049749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300006904\|Ga0075424_101117675	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006904\|Ga0075424_101597722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300009012\|Ga0066710_103282153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300009098\|Ga0105245_10746650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300009137\|Ga0066709_102108916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300009137\|Ga0066709_102236283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300009143\|Ga0099792_10690636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300009147\|Ga0114129_11245196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300009545\|Ga0105237_10746287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300009840\|Ga0126313_10320972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300009840\|Ga0126313_11791561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300010038\|Ga0126315_11069326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300010039\|Ga0126309_10485338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300010045\|Ga0126311_10209835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1425	Open in IMG/M
3300010371\|Ga0134125_13016814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300010400\|Ga0134122_11267361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300010403\|Ga0134123_10621164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300011003\|Ga0138514_100125435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300011003\|Ga0138514_100138559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300012198\|Ga0137364_11452931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300012206\|Ga0137380_11050615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300012208\|Ga0137376_10695771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300012208\|Ga0137376_11792184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300012209\|Ga0137379_11572455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300012285\|Ga0137370_10191000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1199	Open in IMG/M
3300012356\|Ga0137371_10685916	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300012358\|Ga0137368_10099275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2264	Open in IMG/M
3300012360\|Ga0137375_11174884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300013102\|Ga0157371_10204460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300013105\|Ga0157369_11235161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300013307\|Ga0157372_12722442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300013770\|Ga0120123_1011226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1726	Open in IMG/M
3300015209\|Ga0167629_1167531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300015371\|Ga0132258_13307973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300015373\|Ga0132257_101487453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300015373\|Ga0132257_102805483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300017792\|Ga0163161_10578535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300017792\|Ga0163161_11118880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300017965\|Ga0190266_10124940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300018061\|Ga0184619_10188844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300018061\|Ga0184619_10464313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300018433\|Ga0066667_11865853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300018466\|Ga0190268_12050017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300018476\|Ga0190274_10584460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300018482\|Ga0066669_11305120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300019361\|Ga0173482_10644777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300019878\|Ga0193715_1022421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1371	Open in IMG/M
3300020001\|Ga0193731_1032858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M
3300020006\|Ga0193735_1128909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300020018\|Ga0193721_1049592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1105	Open in IMG/M
3300020022\|Ga0193733_1078971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300021344\|Ga0193719_10363634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300021951\|Ga0222624_1219371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300025901\|Ga0207688_10361536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300025904\|Ga0207647_10140047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1418	Open in IMG/M
3300025908\|Ga0207643_10509792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300025914\|Ga0207671_10654480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300025924\|Ga0207694_11136088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300025932\|Ga0207690_10266610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1329	Open in IMG/M
3300026332\|Ga0209803_1202612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300026548\|Ga0209161_10129859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300028379\|Ga0268266_11590800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300028707\|Ga0307291_1146870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300028710\|Ga0307322_10047369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300028711\|Ga0307293_10181864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300028718\|Ga0307307_10023077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1732	Open in IMG/M
3300028718\|Ga0307307_10270490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300028720\|Ga0307317_10117691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300028722\|Ga0307319_10051086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1298	Open in IMG/M
3300028771\|Ga0307320_10032289	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300028771\|Ga0307320_10135985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300028771\|Ga0307320_10193353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300028791\|Ga0307290_10169480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300028802\|Ga0307503_10510585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300028824\|Ga0307310_10151475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300028872\|Ga0307314_10021313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300028872\|Ga0307314_10207247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300028881\|Ga0307277_10180238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300030336\|Ga0247826_11717753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300030989\|Ga0308196_1027177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300031091\|Ga0308201_10088805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300031093\|Ga0308197_10194444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300031170\|Ga0307498_10188690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300032013\|Ga0310906_10872449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300032159\|Ga0268251_10289429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300034644\|Ga0370548_061581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.80%
Host-Associated	Host-Associated	25.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.44%
Plants	Host-Associated → Plants	25.20%
Aquatic	Environmental → Aquatic	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.02%
Sediment	Environmental → Aquatic → Sediment	1.57%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.57%
Roots	Host-Associated → Plants → Roots	1.57%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Phylloplane	Host-Associated → Plants → Phylloplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.87%
Loam	Environmental → Terrestrial → Soil → Loam	7.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.57%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.15%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.57%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001566	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-35cm)- 6 week illumina	Environmental	Open in IMG/M
3300001978	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1039579582	3300000956	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEVGAMGKHIAQAKQNSSSELVRELADIHGSGFGLTASPDKVENETLAALQTAKATLESKAPDELEP
A1565W1_100225581	3300001536	Permafrost	MAGKSDFTDQEWEQLHKGVTGAGLLVSLSDRSFFDTFKEAGALAKHMANTRQSSSPLVKELAASGGTGFRLGSTPDTVESETLEALRAAAATLQQKAPDELDAYKQF
A10PFW1_120669414	3300001538	Permafrost	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDSFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLE
A2135W6_13522202	3300001566	Permafrost	MMEVGTNAGLSSNGRIMATKADFTEQEWESFQKGVTGAGLLVSLSDRSFFDTFKEAGALGKHIAQARQSNSSELVREVASIHGTGFGLTNSPDTVETETLAALR
JGI24747J21853_10091163	3300001978	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESK
Ga0063454_1011682971	3300004081	Soil	MAKKSDFTEQEWDALQKGVVGAGLLVSLSDRGFFDTFKEAGALAKHVATGKESQSELVRSLADVRGTGFGLTSSPEKVEQETLSALQAAKAALEAKAPDEL
Ga0062593_1003466931	3300004114	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGATSSLDKVENETLEAL
Ga0062589_1028825231	3300004156	Soil	VAKRADFTDEEWESLQMGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQNSSSELVRELADVHGAGFGVRTSP
Ga0062590_1019300061	3300004157	Soil	MAKKSDFTEQEWEALQKGVTGAGLLVSVSDRGFFDSFKEAGALAKHIAQAKQNSSSELVRELADVHGSGFGLTSSPEKVEQETIQALQTAKTALESKAPDEVDAYRQF
Ga0063356_1017748033	3300004463	Arabidopsis Thaliana Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDE
Ga0063356_1056639942	3300004463	Arabidopsis Thaliana Rhizosphere	MAKKSDFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGVLGKHLAQAKHDNSSEFIRELADTHGTGFGFTTSPDKVETETLEALQTAKTTLASKAPDE
Ga0062595_1000207821	3300004479	Soil	MAKKADFTEQEWTSLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQGNSSELIRELADLHGTGFGLTSSPDKVEAETVAALQSAKTALESRAPEEL
Ga0062592_1005127793	3300004480	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRGFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGSGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFV
Ga0066808_10255902	3300005159	Soil	MAKKSDFTEQEWESMQKGVTGAGLLVSLSDRSFFDTFKEAGALAKHVATAHEKSDSELVRRVAQGHSTGFGVTTPI
Ga0066680_108940352	3300005174	Soil	MAGKADFTEQEWESLQKGVLGAGLLVSLSDRSFFDTFKEAGALGKHVAAARQNKTSELVRELADVRGAGFGLTSSPDKVEQETLEALRSAKTTLESKAPDELEPYRQFVV
Ga0070680_1016131652	3300005336	Corn Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGVTGAGFLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELADMHGTGFGLAASPEKVERETLEALRNAKA
Ga0070689_1006864832	3300005340	Switchgrass Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGLTGAGLLVPLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELADMHGTGFGLAASPEKVERETLEALRNAK
Ga0070687_1002351033	3300005343	Switchgrass Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHT
Ga0070692_106884701	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKSDFTEQEWEALQKGVTGAGVLVSLSDRGFFDTFKEAGALAKHVAQAKQNNSSELVRELANVHGTGFGLTSSPEKVEEETIQALQAAKTALESK
Ga0070671_1011121362	3300005355	Switchgrass Rhizosphere	MASKADFTEQEWESLQKGVVGGGLLVSLSDRSFFDTFKEAGAMAKHVAQARQSSSSDLIRELANVHGTGFGVTSAPEKVENETLDALRAAKQALEA
Ga0070673_1008741651	3300005364	Switchgrass Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAP
Ga0070711_1002535613	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLE
Ga0070705_1003260673	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKTTLESKAP
Ga0070708_1010795772	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQGNSSELIRELADVHGTGFGLTSSPDKVEAETVAALQSAKTALE
Ga0066689_100925893	3300005447	Soil	MAKKGDFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEVGALGKHVAQAKQSSSSELVRELGDLHGTGFGLTASPDKVESETLAALQTAKTTLESKA
Ga0070678_1006646562	3300005456	Miscanthus Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGLTGAGLLVSLSDRSFFDTFKEAGSLAKHMAQAKRGSSSGLVRELAELHGTGFGLAASPEKVERETLEALR
Ga0073909_101544713	3300005526	Surface Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLAELHGSGFGLTSSPDKVENETLAALRTAKTTLESKAPDELEPYRQFV
Ga0070697_1007277621	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKSDFTEQEWESLQKGALGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNSSELVREVAEVRGTGFGLTSSPDKVEK
Ga0070730_105923952	3300005537	Surface Soil	MATRADFTAQEWESLQQGVTGAGLLVSLSDRSFFDTFKEAGALGEHIAQAKQSNSSELVRELADIHGTGFGLTSSPDAIETETVAALQSAKTTLESKAPD
Ga0066692_109218802	3300005555	Soil	VAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSELVRELADVHGTGFGVTTSPDKVESETLAALQTAK
Ga0066707_101805143	3300005556	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSVSDRSFFDTFKEAGALGKHVAQAKQSSSSELVRELGDLHGTGFGLTASPDKVESETLAALQTAKTTLE
Ga0066698_110038382	3300005558	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSVSDRSFFDTFKEAGALGKHVAQAKQSSSSELIRELAELHGTGFGLTSSPDKVESETLAALQTAKSTL
Ga0066702_100101231	3300005575	Soil	MAETLTHDELQTLHKGVTGAGLLVSLSDRSFFDTFKEAGALARHVSGARSSSSSPVVREVAALGGGTGFGVTSHPEKIKQ
Ga0068861_1017569362	3300005719	Switchgrass Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGVTGAGFLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELADMHGTGFGLAASPEKVERETLEALRNAKAV
Ga0068863_1019000201	3300005841	Switchgrass Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKT
Ga0068863_1027188862	3300005841	Switchgrass Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGLTGAGLLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELAEMHGTGFGLTASPEKVERETLEALRNAK
Ga0075364_102956692	3300006051	Populus Endosphere	MAKKSDFTEQEWEALQKGVTGAGLLVSLSDRGFFDTFKEAGALAKHVAQAKQNNSSELVRELADVHGTGFGLTSSPEKVEEETIQALQAAKTALESK
Ga0097621_1019824762	3300006237	Miscanthus Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELAAMHGTGFGLAASPEKVERETLEAL
Ga0074053_100172912	3300006575	Soil	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEA
Ga0074057_100497492	3300006605	Soil	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEAL
Ga0075424_1011176751	3300006904	Populus Rhizosphere	MAKKDDFTEQEFDALQKGVTGAGLLVAVSDRGFFDTFKESAALAKHVAKGKQESSSELVREIADVHGSGFSVRSKPEELETETLAALQTAKTTLETKAPDELDAYRQF
Ga0075424_1015977222	3300006904	Populus Rhizosphere	MARKEDFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVREIAEMHGTGFGLTASPEKVERETLEA
Ga0066710_1032821531	3300009012	Grasslands Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSELIRELAELHGTGFGLTSSPDKVESETLAALQTAKSTLE
Ga0105245_107466502	3300009098	Miscanthus Rhizosphere	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAAALGKHVAQAKQSSSSDLVRDLADLHGTGFGATSSPDKVE
Ga0066709_1021089161	3300009137	Grasslands Soil	MAKKSDFTEQEWESLQKGVLGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELANVRGTGFGLTSSPDKVEHETVEALQSAK
Ga0066709_1022362832	3300009137	Grasslands Soil	MAGKSDFTEQEWESLHKGVVGAGLLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVEHETLEALRS
Ga0099792_106906362	3300009143	Vadose Zone Soil	MAKKSDFTEQEWESLHKGVLGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELADVRGTGFGLTSSPDKVEHETVEALQSAIEMLGNVRG*
Ga0114129_112451961	3300009147	Populus Rhizosphere	MAKKSDFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGVLGKHLAQAKHDNSSEFIRELADTHGTGFGLTTSPDKVETETLEAL
Ga0105237_107462871	3300009545	Corn Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYRQFVL
Ga0126313_103209721	3300009840	Serpentine Soil	MATKTDFTEQEWESLHKGVVGAGLLVSVSDRSFFDTFKEAGALAKHVAQAGKSSSSTLVRDLAEERGSGFGVRSSPEELESQTLEALRAAKSTLQAKAPDEMEPYRELV
Ga0126313_117915611	3300009840	Serpentine Soil	MATKSDFTEQEWQELQKGVTGAGLLVAVSDRGFFDTFKEAAALGRHLASARQGNSSELVRDLGEMRGTGFGMTASPDEVERETTGALATAVATLQAKAPDE
Ga0126315_110693261	3300010038	Serpentine Soil	MATKSDFTEQEWQELQKGVTGAGLLVAVSDRGFFDTSKEAAALGRHLASARQGNSSELVRDLGEMRGTGFGMTASPDEVERETTGALATAVATLQAKAPDEI
Ga0126309_104853382	3300010039	Serpentine Soil	VATKTDFTEQEWESLHKGVFGAGLLVSMSDRSFFDTFKEAGALGKHVAAAKKSSSSELVRELADIHGTGFGLTSSPDAVENETLAALQSAKTTL
Ga0126311_102098351	3300010045	Serpentine Soil	MMATKADFTEEEWEALHKGVMGAGLLVSVSDRSFFDTFKEAGTLAHHVAGAKQSSSSELIRDLAGEGGTGFSRKDSPDEVERSTLEALRTAKATLQAKAPDEWEAYKPF
Ga0134063_106910402	3300010335	Grasslands Soil	MAETLTHDELQTLHKGVTGAGLLVSLSDRSFFDTFKEAGALARHVSGARSSSPVVREVAALGGGTGFGVTSHPEKIEQETIAALQT
Ga0134125_130168141	3300010371	Terrestrial Soil	MASKADFTAQEWESLQLGVTGAGLLVSLSDRSFFDTFKEAGALGKHIAQAKQSNSSELIRELADIHGTGFGLTSSPDAVETETLAALRSAKTALASKAPDELESY
Ga0134122_112673612	3300010400	Terrestrial Soil	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTKPDVVERETLEALHT
Ga0134123_106211643	3300010403	Terrestrial Soil	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELIRELADVHGTGFGVTTSPDVVEHETLEALHTAKTTLES
Ga0138514_1001254351	3300011003	Soil	MAKKADFTEQEWEPLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRELADLHGTGFGLTSSPDKVENET
Ga0138514_1001385591	3300011003	Soil	MATKADFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGALAKHIAQAKQNSPSELVRELADIHGTAFGLTSSPNEVENQTLEALRSA
Ga0137364_114529311	3300012198	Vadose Zone Soil	MAKKSDFTEQEWESLQKGVLGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELADVRGTGFGLTSPPDKVEHETVEALQSAKATLEAK
Ga0137380_110506152	3300012206	Vadose Zone Soil	MARKADFTEQEWESLQKGVMGAGLLVSLSDRSFFDSFKEAGALGKHVAQAKKGSSSELVRELADMHGTGFGLTSSPDAVEN
Ga0137376_106957711	3300012208	Vadose Zone Soil	MAGKSDFTGQEWESLHKGVVGAGLLVSLSDRSFFDSFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVEHETLEALRSAKTTLEAKAPDELEPYRQF
Ga0137376_117921841	3300012208	Vadose Zone Soil	MAKKSDFTEQEWESLQKGVLGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELAVVRGTGFGLTSSPDKVE
Ga0137379_115724551	3300012209	Vadose Zone Soil	MAGKSDFTEQEWESLQKGVLGAGLLVSLSDRSFFDTFKEAGALGKHVAAARQNKTSELVRELADVRGAGFGLTSSPDKVEQETLEALRSAKTT
Ga0137370_101910001	3300012285	Vadose Zone Soil	MAMKSDFTEQEWDSLQKGVLGAGLLVSLSDRSFFDTFKEAGALAKHVAAAKQSNTSELVRELADVHGTGFGLTSSPDKVEHETLEALQS
Ga0137371_106859161	3300012356	Vadose Zone Soil	MAKKADFTEQEWESLQKGVLGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLIQELADVHGTGFGLTSSPDKVEAETLEALKSAKTTLESKAPDELEPYRQFV
Ga0137368_100992751	3300012358	Vadose Zone Soil	MAEKSDFTEQEWEALQKGVVGAGLLVSLSDRGFFDTFKEAGALGKHVATAKQSTSSELVRELADIRGTGFGLTSSPEKVEQETLAALQTAKTALESKAPDE
Ga0137375_111748842	3300012360	Vadose Zone Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRELADLHGTGFGLTSSPDKVENETLAALRAAKTTLESK
Ga0157371_102044601	3300013102	Corn Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHIAQAKQSNPSHLVRELASIHGSGFGLTSSPDAVETETLAALRSAKTALASKAPDELDSYRQF
Ga0157369_112351612	3300013105	Corn Rhizosphere	MAGKADFTAQEWESLQQGITGAGLLVSLSDRSFFDTFKEAGALGKHIAQAKQSNPSHLVRELASIHGSGFGLTSSPDAVQTETLAALRSAKTALASKAPDELDS
Ga0157372_127224421	3300013307	Corn Rhizosphere	MAKKSDFTEQEWEALQKGVVGAGLLVSLSDRGFFDTFKEAGALGKHVATAKQSQSELIRELGGVHGSGFGLTSSPEKVE*
Ga0120123_10112264	3300013770	Permafrost	MEVGTNAGLSSNGRIMATKADFTEQEWESFQKGVTGAGLLVSLSDRSFFDTFKEAGALGKHIAQARQSNSSELVREVASIHGTGFGLTNSPDTVETETLAALRNAK
Ga0167629_11675311	3300015209	Glacier Forefield Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRELAELHGTGFGLTSSPDKVENETLEALRTWPKVCPALSAS*
Ga0132258_133079732	3300015371	Arabidopsis Rhizosphere	MAQKSDFTEQEWESMQKGVTGAGLLVSLSDRSFFDTFREAGALGKHIAHAKQSNQSELIRELADTHGSGFGLVASPDKVENETLEALQTAKTTLAAKA
Ga0132257_1014874531	3300015373	Arabidopsis Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGVTGAGFLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELAELHGTGFGLAASPDKVERETLEALRNAKAALES
Ga0132257_1028054832	3300015373	Arabidopsis Rhizosphere	MAKKDDFSEQEWDTLRKGAMGAGMLVSISERGFFDSFKEAGALAKHVAKARENQSSELLRDLAGERGTGFGVTDSPSEVEKETLDALRSATALLQ
Ga0163161_105785353	3300017792	Switchgrass Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLESKAPDELEPYR
Ga0163161_111188801	3300017792	Switchgrass Rhizosphere	MSLLTREGSVATRTDFTDQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELADMHGTGFGLAASPEKVERETLEALRNAKAALESKAP
Ga0190266_101249402	3300017965	Soil	MAKKSDFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGVLGKHLAQAKHDNSSEFIRELADTRGTGFGLATSPDKVERETLEALQTAKTTLTSKAPDELD
Ga0184619_101888441	3300018061	Groundwater Sediment	MAKKADFTEQEWEALQKGVVGTGLLVSLSDRSFFDTFKEAGALGKHVATAKQSNSSELVRELADVRGTGFGLTSSPDKVEQETITALQSAKTTLESKAPDELEPYRQ
Ga0184619_104643131	3300018061	Groundwater Sediment	MAGKSDFSEQEWESLHKGVVGAGLLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDEVEHETLEALRSAKTTLESKAPDELEPYRQFVV
Ga0066667_118658532	3300018433	Grasslands Soil	MAAKSDFTEQEWDALQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVSQARQSNSSGLVRELAEVHGSGFGLTSSPEAVERQTLDALRTAKTTVETKAPDEPDG
Ga0190268_120500171	3300018466	Soil	MAKKSDFTEQEWEALQKGVVGSGLLVSLSDRSFFDSFKEAGALSKHVGQAKQNSSSELVRELANVRGTGFGLTSSPDKVERETLEA
Ga0190274_105844604	3300018476	Soil	MAKKSDFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGVLGKHLAQAKHDNSSEFIRELADTHGTGFGLATSPDKVERETIEALQTARTTLASKAPDE
Ga0066669_113051201	3300018482	Grasslands Soil	MAKKGDFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEVGALGKHVAQAKQSSSSELVRELGDLHGTGFGLTASPDKVESETLAALQTAKTTLESKAPDE
Ga0173482_106447771	3300019361	Soil	MSLLTREGSVATRTDFTDQEWESLQKGVTGAGFLVSLSDRSFFDTFKEAGSLAKHMAQAKQGSSSGLVRELADMHGTGFGLAASPEK
Ga0193715_10224213	3300019878	Soil	MAKKADFSQDEWEALQKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQAGSDELIRELADIHGTGFGVKTSPDVVERETLEALQTAKKTLESKA
Ga0193731_10328581	3300020001	Soil	MAKKADFSQDEWEALQKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQAGSDELIRELADIHGTGFGVKTSPDVVERETLEALQTAKKTLESKAPDE
Ga0193735_11289091	3300020006	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELE
Ga0193721_10495921	3300020018	Soil	MAGKSDFTEQEWESLHKGVVGAGLLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVENETLEAL
Ga0193733_10789712	3300020022	Soil	MAGKSDFTEQEWESLHKGVVGAGLLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVENETLEA
Ga0193719_103636342	3300021344	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDSFKEAGALGKHVAQAKQSSSSDLVRDLADLHGMGFGLTSSPDK
Ga0222624_12193712	3300021951	Groundwater Sediment	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENE
Ga0207688_103615361	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLARRAMSSTAIRSA
Ga0207647_101400471	3300025904	Corn Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTHALAFRRVFEQHHVAVLRRT
Ga0207643_105097921	3300025908	Miscanthus Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVV
Ga0207671_106544801	3300025914	Corn Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERE
Ga0207694_111360881	3300025924	Corn Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAK
Ga0207690_102666101	3300025932	Corn Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEAVI
Ga0209803_12026121	3300026332	Soil	MAKKSDFTEQEWESLQKGVLGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELADVRGTGFGLTSSPDKVEHETVEALQ
Ga0209161_101298591	3300026548	Soil	MAKKSDFTEQEWESLQKGVLGAGLLVSLSDRSFFDSFKEAGALAKHVAAAKQSNTSELVRELADVRGTGFGLTSSPDKVEHETVEALQSAKATLEAKAPD
Ga0268266_115908001	3300028379	Switchgrass Rhizosphere	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKKTLE
Ga0307291_11468702	3300028707	Soil	MAKKSDFTEQEWESLHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAAAKKSSTSELVRELADVRGTGFGVTSSPDKVEHETIE
Ga0307322_100473693	3300028710	Soil	MAKKADFSQDEWEALQKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQAESNELIRELADIHGTGFGVKSSPDAVERETLEALQTAKKTLESKAPDELEPYREFVL
Ga0307293_101818642	3300028711	Soil	MAGKSDFTEQEWESLHKGVVGAGLLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVEHETLEALRSAKTALESKA
Ga0307307_100230773	3300028718	Soil	MAGKSDFTEQEWESLHKGVVGAALLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVENET
Ga0307307_102704901	3300028718	Soil	MAKKSDFTEQEWEALQKGVVGAGLLVSLSDRGFFDTFKEAGALGKHVATAKQSSSSELVRELANIHGTGFGLTSSPEKVEQETLAALQ
Ga0307317_101176912	3300028720	Soil	VAKKSDFTEQEWEALKKGVVGAGLLVSLSDRGFFDTFKEAGALAKHVGTAKQSGSSELVRELSDVRGAGFGLTASPDKVERETLEALQTAKAA
Ga0307319_100510863	3300028722	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKT
Ga0307320_100322891	3300028771	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDSFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEAL
Ga0307320_101359851	3300028771	Soil	VAKKSDFTEQEWEALQKGVVGAGLLVSVSDRGFFDTFKEAGALSKHVAGAKQSGSSELVRELADVRGTGFGLTASPDKVERETLEALQTAK
Ga0307320_101933532	3300028771	Soil	MAKKSDFTEQEWESLHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAAAKQSSTSELVRELADVRGTGFGVTSSPDKVEHETIEALHSAKATLESKAPDELEAYR
Ga0307290_101694802	3300028791	Soil	MAGKSDFTEQEWESLHKGVVGAGLLVSLSDRSFFDTFKEAGALSKHVVAAKQSSTSELVRELADVRGAGFGLTSSPDKVENETLEALR
Ga0307503_105105851	3300028802	Soil	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGATTSPDVVERETLEALHTAKTTLESKAPDELEPYRQFVL
Ga0307310_101514753	3300028824	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYR
Ga0307314_100213133	3300028872	Soil	MAKKADFSEQEWDALHKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAKTT
Ga0307314_102072471	3300028872	Soil	MAKKADFSQDEWEALQKGVTGAGLLVSLSDRSFFDTFKEAGALGKHVAKAKQAGSDELIRELADIHGTGFGVKTSP
Ga0307277_101802381	3300028881	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLYGSGFGLTSSPDKVENETLEALRTAKTTLE
Ga0247826_117177531	3300030336	Soil	MATKTDFTDEEWDALHKGLVGSGLLVSMSDRSFFDTFKEAGSLGKHMANAKQNSSSELIRELAGTGGTGFSSRTPQEELERETLEALQKAKATLAAKAPE
Ga0308196_10271771	3300030989	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPDELEPYRQFV
Ga0308201_100888052	3300031091	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAHAKQSSSSDLVRDLADLYGTGFGLTASPDKVENETLDALRTAKTTL
Ga0308197_101944442	3300031093	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDSFKEAGALGKHVAQAKQSSSSDLVRDLADLHGMGFGLTSSPDKVENETLEALRTAKTTLESKA
Ga0307498_101886902	3300031170	Soil	MAKKADFNEQEWDALHKGVTGAGLLVSMSDRSFFDTFKEAGALSKHVAKAKQTGSSELVRELADVHGTGFGVTTSPDVVERETLEALHTAK
Ga0310906_108724491	3300032013	Soil	MAKKSDFTEQEWESLQKGVTGAGLLVSLSDRSFFDTFKEAGVLGKHLAQAKHDNSSEFIRELADTHGTGFGLTTSPDKVE
Ga0268251_102894292	3300032159	Agave	MATKADFTDQEWESLQKGVTGAGLLVSLSDRGFFDSFKEAGALGKHIAQGKQANSSALVRELADVHGIGFGLTSSPETVESETLGALQAARTTLEAKAPDELEPYRQFVL
Ga0370548_061581_1_300	3300034644	Soil	MAKKADFTEQEWESLQKGVVGAGLLVSLSDRSFFDTFKEAGALGKHVAQAKQSSSSDLVRDLADLHGTGFGLTSSPDKVENETLEALRTAKTTLESKAPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065867

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences