Metagenome / Metatranscriptome Family F065823

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065823
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	67 residues
Representative Sequence	QMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRLSTAQRSMGSGR
Number of Associated Samples	111
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.78 %
% of genes near scaffold ends (potentially truncated)	60.63 %
% of genes from short scaffolds (< 2000 bps)	74.02 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.465 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.535 % of family members)
Environment Ontology (ENVO)	Unclassified (26.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.520 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.09% β-sheet: 0.00% Coil/Unstructured: 87.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF09990	DUF2231	13.39
PF13473	Cupredoxin_1	5.51
PF00149	Metallophos	1.57
PF11199	DUF2891	1.57
PF01569	PAP2	1.57
PF13668	Ferritin_2	0.79
PF02416	TatA_B_E	0.79
PF01904	DUF72	0.79
PF00296	Bac_luciferase	0.79
PF09844	DUF2071	0.79
PF01047	MarR	0.79
PF08281	Sigma70_r4_2	0.79
PF01471	PG_binding_1	0.79
PF03453	MoeA_N	0.79
PF07638	Sigma70_ECF	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.79
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.46 %
Unclassified	root	N/A	16.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.46 %
Unclassified	root	N/A	16.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.46 %
Unclassified	root	N/A	16.54 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	47.24 %
Unclassified	root	N/A	16.54 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.36 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	47.24 %
Unclassified	root	N/A	16.54 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.36 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	43.31 %
Unclassified	root	N/A	16.54 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	43.31 %
Unclassified	root	N/A	16.54 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	43.31 %
Unclassified	root	N/A	16.54 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	43.31 %
Unclassified	root	N/A	16.54 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	43.31 %
Unclassified	root	N/A	16.54 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.36 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10043517	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300004156\|Ga0062589_100356696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1164	Open in IMG/M
3300004156\|Ga0062589_101890580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300004480\|Ga0062592_102023318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300004643\|Ga0062591_101693691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300005093\|Ga0062594_100401247	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005167\|Ga0066672_10059321	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300005288\|Ga0065714_10206320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300005290\|Ga0065712_10028737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1279	Open in IMG/M
3300005290\|Ga0065712_10667634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005293\|Ga0065715_10003958	All Organisms → cellular organisms → Bacteria	3757	Open in IMG/M
3300005365\|Ga0070688_100344207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1090	Open in IMG/M
3300005435\|Ga0070714_102379948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005445\|Ga0070708_101901347	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005445\|Ga0070708_102027551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300005447\|Ga0066689_10086080	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300005467\|Ga0070706_100549249	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005468\|Ga0070707_102315605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300005556\|Ga0066707_10257404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1139	Open in IMG/M
3300005556\|Ga0066707_10617673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300005559\|Ga0066700_11038951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300005618\|Ga0068864_101479846	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005764\|Ga0066903_102448956	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300006034\|Ga0066656_10352723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	951	Open in IMG/M
3300006049\|Ga0075417_10547990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300006358\|Ga0068871_101307297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300006791\|Ga0066653_10426807	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006806\|Ga0079220_11328777	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300006806\|Ga0079220_11807074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300006854\|Ga0075425_101772053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300006903\|Ga0075426_11159222	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300006904\|Ga0075424_100179717	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300007255\|Ga0099791_10283461	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009012\|Ga0066710_100330018	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300009143\|Ga0099792_10872947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300010320\|Ga0134109_10105067	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300010336\|Ga0134071_10135976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1189	Open in IMG/M
3300011270\|Ga0137391_11424653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300012206\|Ga0137380_11186500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300012285\|Ga0137370_10028440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2881	Open in IMG/M
3300012362\|Ga0137361_11210662	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300012685\|Ga0137397_10446432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	964	Open in IMG/M
3300012906\|Ga0157295_10156663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300012915\|Ga0157302_10039266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1291	Open in IMG/M
3300012918\|Ga0137396_10235825	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300012922\|Ga0137394_10285153	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300012923\|Ga0137359_10820816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300012925\|Ga0137419_10066099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2391	Open in IMG/M
3300012927\|Ga0137416_10240924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1473	Open in IMG/M
3300012929\|Ga0137404_10033433	All Organisms → cellular organisms → Bacteria	3822	Open in IMG/M
3300012930\|Ga0137407_11614868	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012944\|Ga0137410_10877347	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300012951\|Ga0164300_10042956	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300012955\|Ga0164298_10019145	All Organisms → cellular organisms → Bacteria	2880	Open in IMG/M
3300012957\|Ga0164303_10755247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300012958\|Ga0164299_10873090	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012960\|Ga0164301_10061430	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300012960\|Ga0164301_10161392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1384	Open in IMG/M
3300012971\|Ga0126369_11938888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300012987\|Ga0164307_10129381	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300012989\|Ga0164305_10227010	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300014969\|Ga0157376_11036416	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300015201\|Ga0173478_10134580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	961	Open in IMG/M
3300015241\|Ga0137418_10032783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4806	Open in IMG/M
3300015264\|Ga0137403_11391082	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300015358\|Ga0134089_10321108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300015374\|Ga0132255_100411857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1970	Open in IMG/M
3300016319\|Ga0182033_10067981	All Organisms → cellular organisms → Bacteria	2497	Open in IMG/M
3300016404\|Ga0182037_10481067	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300018061\|Ga0184619_10242877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300019866\|Ga0193756_1040555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300020002\|Ga0193730_1079421	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300020010\|Ga0193749_1093192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300020170\|Ga0179594_10409498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300021080\|Ga0210382_10069787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1420	Open in IMG/M
3300021413\|Ga0193750_1021998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1514	Open in IMG/M
3300024330\|Ga0137417_1032048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300025910\|Ga0207684_10001272	All Organisms → cellular organisms → Bacteria	27829	Open in IMG/M
3300025916\|Ga0207663_10624985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	848	Open in IMG/M
3300025922\|Ga0207646_10450458	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300025931\|Ga0207644_11782970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300026088\|Ga0207641_10748496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300026318\|Ga0209471_1004381	All Organisms → cellular organisms → Bacteria	7834	Open in IMG/M
3300026514\|Ga0257168_1008737	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300026551\|Ga0209648_10810958	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300026552\|Ga0209577_10404557	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300027050\|Ga0209325_1015689	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300027071\|Ga0209214_1034885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300027717\|Ga0209998_10076973	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300030916\|Ga0075386_10020341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1461	Open in IMG/M
3300030962\|Ga0138297_1418978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300031015\|Ga0138298_1597955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300031231\|Ga0170824_100310083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1577	Open in IMG/M
3300031446\|Ga0170820_15367839	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031446\|Ga0170820_16231673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	805	Open in IMG/M
3300031469\|Ga0170819_17477168	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031474\|Ga0170818_101765077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300031474\|Ga0170818_105517840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300031720\|Ga0307469_10871517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300031740\|Ga0307468_101543776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300031941\|Ga0310912_10963850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300032012\|Ga0310902_11251608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300032180\|Ga0307471_100917985	Not Available	1043	Open in IMG/M
3300032180\|Ga0307471_103947412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300032261\|Ga0306920_100242230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2691	Open in IMG/M
3300033412\|Ga0310810_10779647	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300033412\|Ga0310810_11211796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.40%
Host-Associated	Host-Associated	12.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.83%
Plants	Host-Associated → Plants	12.60%
Aquatic	Environmental → Aquatic	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.51%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Sediment	Environmental → Aquatic → Sediment	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.65%
Loam	Environmental → Terrestrial → Soil → Loam	14.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030962	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100435171	3300001867	Forest Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGERKQGLRIVWKTVPAQRLSTEQRTMGSGR*
Ga0062589_1003566962	3300004156	Soil	MKTQMHPTISQMLYPNRQAFFEKLSLSLPPQPAIKIGPAPMPGGQHKQGLRIMRKPAPTQSLSAAQRNMEAHR*
Ga0062589_1018905801	3300004156	Soil	MLYPDRHAFFEKLALSLAPGPAIKIGPAPMPSAEHKQGLRVMRKAVPAQRLSTAQRSMG
Ga0062592_1020233181	3300004480	Soil	QAFFEKLSLSLPPQPAIKIGPAPMPGGQHKQGLRIMRKPAPTQSLSAAQRNMEAHR*
Ga0062591_1016936912	3300004643	Soil	MHTSINQMLYPDRQAFFEKLALSLPPQPTIKIGPAPMPSGEHKQGLRVMRKAVPAQRLST
Ga0062594_1004012474	3300005093	Soil	MFYPDRHAFFEKLALSLPPRPAIKIGPAPMPSAEHKQGLRVMRKAVPAQRLST
Ga0066672_100593214	3300005167	Soil	MNPTISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIR
Ga0066673_100146935	3300005175	Soil	MNPIISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRKLTWNQYSKLIIDIV*
Ga0066679_105174511	3300005176	Soil	NALSSKSQGFALQFNRRIKMNPTISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRS*
Ga0066690_100578483	3300005177	Soil	MNPTISQIFYPNRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRS*
Ga0065714_102063202	3300005288	Miscanthus Rhizosphere	MHTSINQMIYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGAHKKGLRVMRKAAPAQRLSTAQRSMGSG*
Ga0065712_100287371	3300005290	Miscanthus Rhizosphere	MXYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGAHKKGLRVMRKAAPAQRLSTAQRSMGSG*
Ga0065712_106676341	3300005290	Miscanthus Rhizosphere	FFEKLALSLPPQPAIKIGPGPMPSGGHKQGLRIVWKAVRAQRLSTAQRSMGSGR*
Ga0065715_100039587	3300005293	Miscanthus Rhizosphere	MHTSINQMLYPDRQAFFQKLALSLPPQPAIKIGPAPMPSAEHKQGLRVMRKAVPAQKLSTAQRSMEAQR*
Ga0070688_1003442072	3300005365	Switchgrass Rhizosphere	MHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGAHKKGLRVMRKAAPAQRLSTAQRSMGSG*
Ga0070714_1023799481	3300005435	Agricultural Soil	MHTSINQMLYPDRRAFFEKVALSLPIQPAIKIGPAPMPSGEHKQGLRVMRKAVPAQ
Ga0070705_1006974972	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MFYPDRQAFFARLSWSLSLQPAIKIGPAPLPSGEHRPGSRNMRKAVPTEMLSSAQRSMKARIKGKTEELT*
Ga0070708_1019013472	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQPTISQMFYPDRQAFFAKLSVNLSLQPAIKIRPAPLPSGEHRPGSRNMRKAVPTE
Ga0070708_1020275511	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	EPKTQMHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIMRKAVPAQRLSTAQRSMGSGR*
Ga0066689_100860803	3300005447	Soil	KLALSLPPQPAIKIGPAPMPSGEHKQGLRIVRKAVPAQRLSTAQRSMASGR*
Ga0070706_1005492491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHTSINQMLYPDRQAFFEKLALSLPAQPAIKIGPAPMPSGEHKQGLRIMRKAVPA
Ga0070707_1023156052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHTTISQMLYPDRQAFFEKIALNLPPQPAIKIGPAPLPSGEHRAGLSNLRSAVPTETLSTAQR
Ga0066701_105724221	3300005552	Soil	MHSTISQISYPNRQAFFEKLALSLPPQPALKIGPAPLPSGERRAGSRNMREAVTKTLST
Ga0066707_102574041	3300005556	Soil	MNTTISQISYPGRQAFFEKLALSLSPQPAIKIGPAPLFSGGRRPGSRNMRKAVPTEMLS
Ga0066707_106176731	3300005556	Soil	NLQMHTTISQMLYPDRHAFFEKLALSLPPQPAIKIGPAPLPGGEHRAGLRNLRSAVPTETLSTAQRGMKASRRS*
Ga0066700_107710122	3300005559	Soil	MHTTISQMFYPDRQAFFAKLSVSLLLQPAIKIGPAPLPSGEHRPGSRNMRKAVPTETLSSAQRSIKARIKGKAEELT*
Ga0066700_110389512	3300005559	Soil	PNLQMHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGGHSTGLRNLRSVVPTETLSTAQRGMKASRR*
Ga0068864_1014798461	3300005618	Switchgrass Rhizosphere	MLYPDRHAFFEKIALNLPPQPAIKIGPAPLPGGQHKEGLRNLRSAVPTETLSTAQRGMK
Ga0066903_1024489561	3300005764	Tropical Forest Soil	MGLLLQWEAKTQMHTSINQMLYPDRQAFFKKIALSLPPQPAIKIGPAPMPGAEHKRGLRIMRKAVPVQRLST
Ga0066656_103527232	3300006034	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGRAPMPSAEHKQGLRVMLNAVPAQRLSTAQRSMAS
Ga0075417_105479901	3300006049	Populus Rhizosphere	MSYSDRQAFFERLALSLAPQPAIKIGPAPMPSAEHKQGLRVMRKAVPAQRLSTVQRKHDVRQIL
Ga0068871_1013072971	3300006358	Miscanthus Rhizosphere	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRLSTAQRSMGS
Ga0066653_104268072	3300006791	Soil	MHTTISQMLYPDRKAFFEKLALSLPPQPAIKNGPAPLPGGEHRAGLRNLRNAVPTETLST
Ga0079220_113287771	3300006806	Agricultural Soil	MLYPDRQAFFEKLALSLPPQPTIKIGPAPMPSAEHKQGLRIMRKAVPTQKLSTAQRSM
Ga0079220_118070742	3300006806	Agricultural Soil	MALNLPLQPAIKIGPAPMPSEEHKQGLRVMRKAVPAQRLTTAQRSMGSGRRSVP
Ga0075425_1017720531	3300006854	Populus Rhizosphere	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSAEHKQGLRVMRKAVPTQRLSAAQRSMGSGR*
Ga0075426_111592221	3300006903	Populus Rhizosphere	MHTSINQMLYPDRQVFFEKVALSLPIQPAVKMGPAPMPSGEHKQGLRVMRKAVPAQRLSTAQ
Ga0075424_1001797172	3300006904	Populus Rhizosphere	MHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSAEHKQGLRVMRKAVPTQRLSAAQRSMGSGR*
Ga0099791_102834611	3300007255	Vadose Zone Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIMRKAVPAQRLSTAQRSMGSGR
Ga0066710_1003300183	3300009012	Grasslands Soil	MHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRSAVPTETLSKAQRSMKPS
Ga0066710_1022551322	3300009012	Grasslands Soil	IISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRKLTWNQYSKLIIDIV
Ga0099792_108729471	3300009143	Vadose Zone Soil	MLYADRQTFLEKLALSLPPQLAMKIGPAPMPSGKRKQGLRIVRKAVLAQRLSTAQRSMG
Ga0134109_101050671	3300010320	Grasslands Soil	MLYPNRQAFFEKIALSLPPQPAIKIGPAPLPSGEHRAGLSNLRSAVPTETLSTAQRSMKATQKSQ
Ga0134071_101359762	3300010336	Grasslands Soil	MLYPDRQAFFEKLALSLPPQPAIKIGRAPMPSAEHKQGLRVMRNAVPAQRLSTAQRSMGSGR*
Ga0137391_114246532	3300011270	Vadose Zone Soil	FNRRLKMHPTISQMFYPDRRAFFAKLSLSLSLEPAIKIGPAPLPSGEHRAGLQNLRSAVPTETLSTAQRGMKASRR*
Ga0137380_111865001	3300012206	Vadose Zone Soil	QAFFKKLALSLPPQPAIKIGRAPMPSAEHKQGLRVMRNAVPAQRLSTAQRSMASGR*
Ga0137370_100284404	3300012285	Vadose Zone Soil	MRTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRSAVPTETLSKAQRSMKPS*
Ga0137361_112106621	3300012362	Vadose Zone Soil	MHVTISQVLYPDRQAFFEKLALRLPSRPAINIGLVPLPSGLPSLGSRNIRKAVPTHSLCTAQRSMRWPKHLIRVQ
Ga0137397_104464322	3300012685	Vadose Zone Soil	MHTTISQMLYPNRQAFFEKLELSLPPQPAVKIGPAPLPGGEHKAGLQNLRSAVPTETLSTAQRSMKPNRRS*
Ga0137397_107204572	3300012685	Vadose Zone Soil	MNPTISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRS*
Ga0157295_101566631	3300012906	Soil	RQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRLSTAQRSMGSGK*
Ga0157302_100392661	3300012915	Soil	MSGKQPNLQMHTTISQMLYPDRQAFFKKLALSLPPQPAIKIGPAPLPAGKHRPGLRNLRNAVLTETLSAAHHLGGILSGVESP*
Ga0137396_102358253	3300012918	Vadose Zone Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRDLRSAVPSETLSKAQRSMKPS*
Ga0137394_102851532	3300012922	Vadose Zone Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIMRKAVPAQKLSTTQRSMEARR*
Ga0137394_112962652	3300012922	Vadose Zone Soil	MNPTISQISYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRS*
Ga0137359_108208163	3300012923	Vadose Zone Soil	TISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRSAVPTETLSMAQRSMKPS*
Ga0137419_100660993	3300012925	Vadose Zone Soil	NQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIMRKAVPAQRLSTAQRSMEARR*
Ga0137416_102409241	3300012927	Vadose Zone Soil	QKPKTPMHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPDAEHKQGLRVMRKAVPAQRLSTAQRSMGSGR*
Ga0137404_100334335	3300012929	Vadose Zone Soil	MLYPDRQAFFEKLALSLPPQSAIKIGPAPLPGGERRAGLWNLRSAVPTETLSKAQRSMKPS*
Ga0137407_116148682	3300012930	Vadose Zone Soil	MHPTISQMFYPNRQAFFAKLSASLLLQPAIKIGPAPLPGGEQRPGPRNMRRSVPTETLSSAQRSM
Ga0137410_108773471	3300012944	Vadose Zone Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIMRKAVPAQRLSTAQRSM
Ga0164300_100429562	3300012951	Soil	MLYPDRQAFFEKLALSVPPQPAIKIGPAPMPGAEHKQGLRVMRKAVPAQKLSTAQRSMEAQR*
Ga0164298_100191453	3300012955	Soil	MHPSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGAEHKQGLRVMRKAVPAQKLSTAQRSMEAQR*
Ga0164303_107552471	3300012957	Soil	LLYPDRQTFFEKLALSLPPQPAIKIGPAPMPRGGHKQGLRIVWKAVPARRLSTAQRSMGSGR*
Ga0164299_108730902	3300012958	Soil	MHPNINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRL
Ga0164301_100614301	3300012960	Soil	SINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPVAEHKQGLRVMRKAVPAQKLSTAQRSMEAQR*
Ga0164301_101613921	3300012960	Soil	FFEKLALSLPPQLTLKIGPAPMPGGEHKQGLQVMRKAVPAQRLSTARRSMGSGR*
Ga0126369_119388882	3300012971	Tropical Forest Soil	RFRKKITMLWPDRQAFFEKLALSLPPQPAIRIGPAPMPGGKRKQGLWIVRKTVPAQRLSPA*
Ga0164307_101293813	3300012987	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPRAEHKQGLRVMRKAVPAQKLSTAQRSMEAQR*
Ga0164305_102270101	3300012989	Soil	PDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRVMRKAVPAQKLSTAQRSMEAQR*
Ga0157378_124858851	3300013297	Miscanthus Rhizosphere	MHVNISQMFYPNRRAFFERLALSLSLQPALKIGPAPLPSGERRPGSRSLRKALPAEKLSTAQRTMRASRR
Ga0157376_110364161	3300014969	Miscanthus Rhizosphere	MSYPDRQAFFEKLALSLPPQPAIKIGPAPMPGAEHKQGLRVIRKAVPAQTLSTAQRS
Ga0173478_101345801	3300015201	Soil	ISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMSSAEHKQGLRVMRKAVPAQRLSTAQRSMGSGR*
Ga0137418_100327834	3300015241	Vadose Zone Soil	MHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRSAVPTETLSKAQRSMKPS*
Ga0137403_113910822	3300015264	Vadose Zone Soil	MHTTISQMLYPNRQAFFEKLALSLPPQPAVKIGPAPLPGGEHKAGLQNLRSAVPTETLST
Ga0134089_103211081	3300015358	Grasslands Soil	MLYPDRQAFFFEKLALSLPPQPAIKIGRAPMPSAEHKQGLRVMRNAVPAQRLSTAQRSM
Ga0132255_1004118571	3300015374	Arabidopsis Rhizosphere	PKTQMHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGAEHKQGLRTMRKAVPAQRLSTAQRSMGFGR*
Ga0182033_100679811	3300016319	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGRARVPSAEHKQGLWVMRKAVPAQRLSTAQRS
Ga0182037_104810671	3300016404	Soil	MHTSINQMLYPDPQAFFERLALRLPAQPAVKIGPAPMPSGKYKQGLRAMRKAVPAQSLSTAQRSMGS
Ga0184619_102428771	3300018061	Groundwater Sediment	TISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRSAVPTETLSMAQRSMKPS
Ga0066669_100796154	3300018482	Grasslands Soil	MNPIISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRKLTWNQYSKLIIDIV
Ga0193756_10405551	3300019866	Soil	QQKRKTPMHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMHGGQHKQGLRVMRKAVPAQRLSPAQRSMGSGR
Ga0193730_10794212	3300020002	Soil	MHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRSAVPTETLSMAQRSMKPS
Ga0193735_100213210	3300020006	Soil	MHTTIGQIEYPNRQAFFEKLALHLPAQPAIKIGPAPLPSGKRRLGSRNMRKAVPTETLST
Ga0193749_10931921	3300020010	Soil	MHTTIGQIEYPNRQAFFEKLALHLPAQPAIKIGPAPLPSGKRRLGSRNIRKAVPTETLSTAQRSMKPSSHF
Ga0193733_10796281	3300020022	Soil	MHPTISQMFYPNRQAFFAKLSLRLSLQPAIKIGPAPLPTGKYRPGSRNMRKAVPTETLSSAQRSMKARIRGKLCALPR
Ga0179594_104094981	3300020170	Vadose Zone Soil	EKLALSLPPQPAVKIGPAPLPGGEHKAGLQNLRSAVPTETLSTAQRGMKPSRR
Ga0210382_100697872	3300021080	Groundwater Sediment	MHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGSRNLRSAVPTETLSMAQRSMKPS
Ga0193750_10219983	3300021413	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPNAEHKQGLRVMRKAVPAQKLSTAQRSMEAQR
Ga0247691_10188182	3300024222	Soil	LSGNDTALRRQQKAKTPMHTTINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGAHKKGLRVMRKAAPAQRLSTAQRSMGSG
Ga0137417_10320481	3300024330	Vadose Zone Soil	GQISYPDRQAFFEKLALNLPAQPAIRIGPAPLPSGGRRLGLRNMRKAVPTETLSTAQRSMQPTLS
Ga0207684_1000127216	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTISQMFYPDRQAFFARLSLSLSLQPPIKIGPAPLPSGQHRPASRNMRKAVPTETLSSAQRSMKARILGKAEELT
Ga0207663_106249851	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LYPDRQTFFEKLALSLPPQSAIKIGPAPMPSGGHKQGLRIVWKAVPAQRLSTAQRSMGSG
Ga0207646_104504581	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHPTISQMFYPDRQAFFAKLSVSLSLQPAIKIGPAPLPSGERKPGPRNMRKAVPTETLSSAQRSMKARIRGKAEELT
Ga0207644_117829701	3300025931	Switchgrass Rhizosphere	MHTSINQMFYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGAHKKGLRVMRKAAPAQRLSTAQRSIGSGK
Ga0207641_107484961	3300026088	Switchgrass Rhizosphere	MLYPDRQAFFEKLALSLPLQPAIKIGPAPMPSGAHKKGLRVMRKAAPAQRLSTAQRSM
Ga0209471_100438111	3300026318	Soil	MHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGGHSTGLRNLRSVVPTETLSTAQRGMKASRR
Ga0209471_10927033	3300026318	Soil	MNPTISQIFYPDRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRS
Ga0209804_11262922	3300026335	Soil	MNPTISQIFYPNRQAFFARLSLSLSLQPTIKIGPAPLPSGEQKSGSRNMRKAVPTERLSVAQRSMKARIRGGRRS
Ga0257168_10087377	3300026514	Soil	MNTTISQISYPGRQAFFEKLALSLSPQPAIKIGPAPLFSGGRRPGSRNMRKAVPTEMLSTAQRSMKA
Ga0209648_108109581	3300026551	Grasslands Soil	MYLTISQILYPNRQAFFEKLAQSLPPQPAVKIGPAPLPSGERRPGLRNMRRAVPTERLSTAQR
Ga0209577_104045573	3300026552	Soil	MHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPLPGGERRAGLRNLRNAVPTESLSMAQRSMKPSRR
Ga0209325_10156893	3300027050	Forest Soil	LNGKQPKLLMHTTISQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGAEHKQGLRIMRKAVPAQRLSTAQRSMGSGR
Ga0209214_10348852	3300027071	Forest Soil	KQPNLQMHTTISQMLYPDRQAFFEKLALTLPPQPAIKIGPAPLPSGEHRPGSRNMRKAVPTETLSAAQRSMKPSRR
Ga0209419_10520802	3300027537	Forest Soil	MHPTISQMFYPDRQAFFSKVCLNLSRQPAIKIGPAPLPNGEHRPESRNMGKAVPTETLISAQRSMKARIRRKAEELT
Ga0209527_10005114	3300027583	Forest Soil	MHPTISQMFYPDRRAFFAKLSLSLSLQPAIKIGPAPLPSGEHRPGSRNMRKAVPTETLSSAQRRMKARSRGKAEANSSL
Ga0209217_11145461	3300027651	Forest Soil	MHPTISQMFYPDRRAFFARLSVSLSLQPAIKIGPAPLPGGKHRPGSRNMRKAVPTETLSGAQRRMKARIRGKAD
Ga0209998_100769732	3300027717	Arabidopsis Thaliana Rhizosphere	MLYPDRQAFFEKLALSLPPQPAIKIGPGPLPSGEHRPGSRNMRKAVPTETLSGAQRSMKPSRGSQRDQRP
Ga0075386_100203411	3300030916	Soil	KITLLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIVRKAVPAQRLSTAQRSMGSRG
Ga0138297_14189782	3300030962	Soil	VFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRLSTAQRSMGSGR
Ga0138298_15979551	3300031015	Soil	RDRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRLSTAQRSMGSGR
Ga0170824_1003100834	3300031231	Forest Soil	LYADRQTFLEKLALSLPPQLAMKIGPAPMPGEEHKQGSRVMRKAVPAQRLSTVQRSMTSGRYYRTIKAR
Ga0170824_1046142061	3300031231	Forest Soil	NHDTGLRLQHEPKTQMYTSINQMLYPDRQAFFERLALGLPPRPAIKIGPAPMPSAEHKQGLRVMRKAVPTQRLSTAQRRMQAHR
Ga0170820_153678393	3300031446	Forest Soil	MKTQMHPTISQMLYPNRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVIRKAVPAQRLSTAQRSMGSGR
Ga0170820_162316732	3300031446	Forest Soil	MHTSINQMLNPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIARKAVPAQRLSTSHVRSLMAN
Ga0170819_174771681	3300031469	Forest Soil	MHTTISQMLYPDRQAFFEKVALSLPPQPAIRIGPAPLPGGERRAGLQNLRSAVPTETLSTAQRSM
Ga0170818_1017650772	3300031474	Forest Soil	MLNPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIVRKAVSAQRLSTAQRSMGSGR
Ga0170818_1055178402	3300031474	Forest Soil	MHTTISQMLYPDRQAFFEKLALSLPPQPMIKNGPAPIPGGEDRPGLRNLRNAVPTETLSTAQRSMKARIRGKAEELA
Ga0307469_108715171	3300031720	Hardwood Forest Soil	KPKPPMHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSGEHKQGLRIMRKAVPAQRLSTAQRSMGSGR
Ga0307468_1015437761	3300031740	Hardwood Forest Soil	QMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRVMRKAVPAQRLSTAQRSMGSGR
Ga0310912_109638501	3300031941	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPTAEHKQGLGTMRKAVPGQRLSSA
Ga0310902_112516081	3300032012	Soil	MKTQMHPTISQMLYQNRQAFFEKLALSLPPQPAIKIGPAPMPSAEHKQGLRVMRKAVPAQRLSTAKRSMRHGR
Ga0307471_1009179852	3300032180	Hardwood Forest Soil	SKMNTTISQISYRNRQAFFEKLARNLSLQPAIKMGPAPLPSGRPRAGLRNLRKAVPTEALSTAQRSMKANRGSP
Ga0307471_1039474121	3300032180	Hardwood Forest Soil	YPDRQAFFDKLALSLPPQPAIKIGPAPMPGGEHKQGLRIMRKAVPAQRLSTAQRSMEAHR
Ga0306920_1002422303	3300032261	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPTAEHKQGLGTMRKAVPGQRLSSAQRSMEAHR
Ga0310810_107796471	3300033412	Soil	MHTSINQMLYPDRQAFFEKLALSLPPQPAIKIGPAPMPSAEHKQGLRVMRKAVPAQRRSA
Ga0310810_112117961	3300033412	Soil	MLYPDRQAFFEKLALSLPPQPAIKIGPAPMPGGEHKQGLRIARKAVPAQRLSTSHVRSLMANHLTDVASSDQHTVKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065823

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences