Metagenome Family F065820

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065820
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	60 residues
Representative Sequence	MEDELKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLDRAVDKLRKS
Number of Associated Samples	108
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.74 %
% of genes near scaffold ends (potentially truncated)	35.43 %
% of genes from short scaffolds (< 2000 bps)	78.74 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.976 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.024 % of family members)
Environment Ontology (ENVO)	Unclassified (41.732 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.606 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.56% β-sheet: 0.00% Coil/Unstructured: 34.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF12833	HTH_18	22.05
PF02805	Ada_Zn_binding	14.17
PF03061	4HBT	6.30
PF13377	Peripla_BP_3	2.36
PF13488	Gly-zipper_Omp	1.57
PF01252	Peptidase_A8	0.79
PF00528	BPD_transp_1	0.79
PF00356	LacI	0.79
PF01035	DNA_binding_1	0.79
PF00571	CBS	0.79
PF08281	Sigma70_r4_2	0.79
PF13424	TPR_12	0.79
PF05239	PRC	0.79
PF00365	PFK	0.79
PF02870	Methyltransf_1N	0.79
PF03459	TOBE	0.79
PF06029	AlkA_N	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	14.17
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.57
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.57
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.79
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.79
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.98 %
Unclassified	root	N/A	11.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.98 %
Unclassified	root	N/A	11.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.98 %
Unclassified	root	N/A	11.02 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	52.76 %
Unclassified	root	N/A	11.02 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	51.97 %
Unclassified	root	N/A	11.02 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	8.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	46.46 %
Unclassified	root	N/A	11.02 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Tissierellia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.79 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	46.46 %
Unclassified	root	N/A	11.02 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.87 %
Tissierellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales	0.79 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	46.46 %
Unclassified	root	N/A	11.02 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.87 %
Peptoniphilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae	0.79 %
Psychrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter	0.79 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	46.46 %
Unclassified	root	N/A	11.02 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.87 %
Psychrobacter lutiphocae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	0.79 %
Anaerococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Anaerococcus	0.79 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	46.46 %
Unclassified	root	N/A	11.02 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.87 %
Anaerococcus senegalensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Anaerococcus → Anaerococcus senegalensis	0.79 %
Robiginitalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea	0.79 %
Psychrobacter lutiphocae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	46.46 %
Unclassified	root	N/A	11.02 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	7.87 %
Robiginitalea biformata	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea → Robiginitalea biformata	0.79 %
Anaerococcus senegalensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Anaerococcus → Anaerococcus senegalensis	0.79 %
Psychrobacter lutiphocae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	0.79 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_309388_len_2931_cov_16_582737	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig211701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	804	Open in IMG/M
2140918006\|ConsensusfromContig102951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	660	Open in IMG/M
3300000886\|AL3A1W_1281778	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	505	Open in IMG/M
3300004114\|Ga0062593_100000823	All Organisms → cellular organisms → Bacteria → Proteobacteria	9708	Open in IMG/M
3300004114\|Ga0062593_100185028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1636	Open in IMG/M
3300004156\|Ga0062589_100916823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	808	Open in IMG/M
3300004156\|Ga0062589_101471496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	668	Open in IMG/M
3300004157\|Ga0062590_100141771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1626	Open in IMG/M
3300004479\|Ga0062595_100686004	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	819	Open in IMG/M
3300004480\|Ga0062592_102213333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	548	Open in IMG/M
3300004643\|Ga0062591_101647879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	648	Open in IMG/M
3300005093\|Ga0062594_103254255	Not Available	510	Open in IMG/M
3300005175\|Ga0066673_10906164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	501	Open in IMG/M
3300005293\|Ga0065715_10880600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	581	Open in IMG/M
3300005330\|Ga0070690_100262986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1224	Open in IMG/M
3300005330\|Ga0070690_101460129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	551	Open in IMG/M
3300005331\|Ga0070670_102101883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → Psychrobacter lutiphocae	520	Open in IMG/M
3300005340\|Ga0070689_100580678	Not Available	969	Open in IMG/M
3300005344\|Ga0070661_100159252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1709	Open in IMG/M
3300005345\|Ga0070692_11302361	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Robiginitalea → Robiginitalea biformata	521	Open in IMG/M
3300005347\|Ga0070668_102163690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Anaerococcus → Anaerococcus senegalensis	514	Open in IMG/M
3300005347\|Ga0070668_102281878	Not Available	500	Open in IMG/M
3300005353\|Ga0070669_101564887	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	574	Open in IMG/M
3300005434\|Ga0070709_10016784	All Organisms → cellular organisms → Bacteria → Proteobacteria	4188	Open in IMG/M
3300005445\|Ga0070708_100989032	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005451\|Ga0066681_10345098	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005459\|Ga0068867_100287690	Not Available	1350	Open in IMG/M
3300005468\|Ga0070707_101329964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	685	Open in IMG/M
3300005536\|Ga0070697_100320877	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300005546\|Ga0070696_100876984	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	743	Open in IMG/M
3300005578\|Ga0068854_101201233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	679	Open in IMG/M
3300005587\|Ga0066654_10473765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	685	Open in IMG/M
3300005616\|Ga0068852_102642415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	521	Open in IMG/M
3300005834\|Ga0068851_10095304	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1572	Open in IMG/M
3300005840\|Ga0068870_10810435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	655	Open in IMG/M
3300006055\|Ga0097691_1000030	All Organisms → cellular organisms → Bacteria	130695	Open in IMG/M
3300006358\|Ga0068871_101806778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	580	Open in IMG/M
3300006876\|Ga0079217_10004141	All Organisms → cellular organisms → Bacteria	4212	Open in IMG/M
3300006894\|Ga0079215_10439360	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009029\|Ga0066793_10471331	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300009038\|Ga0099829_10652564	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	875	Open in IMG/M
3300009174\|Ga0105241_10538081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1047	Open in IMG/M
3300009174\|Ga0105241_12368216	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	529	Open in IMG/M
3300009789\|Ga0126307_10592153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	895	Open in IMG/M
3300010040\|Ga0126308_11099400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	560	Open in IMG/M
3300010041\|Ga0126312_10925095	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300010399\|Ga0134127_10794288	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	995	Open in IMG/M
3300011119\|Ga0105246_10612468	Not Available	942	Open in IMG/M
3300011246\|Ga0137490_1000999	All Organisms → cellular organisms → Bacteria	4049	Open in IMG/M
3300011998\|Ga0120114_1099013	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	561	Open in IMG/M
3300011999\|Ga0120148_1027355	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300012004\|Ga0120134_1050318	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	722	Open in IMG/M
3300012010\|Ga0120118_1006081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3697	Open in IMG/M
3300012019\|Ga0120139_1023438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1420	Open in IMG/M
3300012019\|Ga0120139_1139859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	626	Open in IMG/M
3300012045\|Ga0136623_10138169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1058	Open in IMG/M
3300012045\|Ga0136623_10198745	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012046\|Ga0136634_10083237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1190	Open in IMG/M
3300012092\|Ga0136621_1013789	All Organisms → cellular organisms → Bacteria	3322	Open in IMG/M
3300012093\|Ga0136632_10055688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1824	Open in IMG/M
3300012189\|Ga0137388_10530629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1094	Open in IMG/M
3300012201\|Ga0137365_10431267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	971	Open in IMG/M
3300012204\|Ga0137374_10017692	All Organisms → cellular organisms → Bacteria	8150	Open in IMG/M
3300012204\|Ga0137374_10606691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	834	Open in IMG/M
3300012208\|Ga0137376_10000242	All Organisms → cellular organisms → Bacteria	22285	Open in IMG/M
3300012208\|Ga0137376_10449714	Not Available	1118	Open in IMG/M
3300012208\|Ga0137376_10752154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	840	Open in IMG/M
3300012210\|Ga0137378_10453530	Not Available	1187	Open in IMG/M
3300012349\|Ga0137387_11079281	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	573	Open in IMG/M
3300012350\|Ga0137372_10015055	All Organisms → cellular organisms → Bacteria	7351	Open in IMG/M
3300012350\|Ga0137372_10577170	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	827	Open in IMG/M
3300012353\|Ga0137367_10009435	All Organisms → cellular organisms → Bacteria	7787	Open in IMG/M
3300012354\|Ga0137366_10108430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2102	Open in IMG/M
3300012529\|Ga0136630_1226009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	670	Open in IMG/M
3300012530\|Ga0136635_10282194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	588	Open in IMG/M
3300012682\|Ga0136611_10292775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1077	Open in IMG/M
3300012951\|Ga0164300_10150811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1088	Open in IMG/M
3300012955\|Ga0164298_10107642	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1489	Open in IMG/M
3300012957\|Ga0164303_10116073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1356	Open in IMG/M
3300013296\|Ga0157374_10240093	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1782	Open in IMG/M
3300013306\|Ga0163162_10573783	Not Available	1255	Open in IMG/M
3300013306\|Ga0163162_12530931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	590	Open in IMG/M
3300013306\|Ga0163162_12834505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	558	Open in IMG/M
3300013307\|Ga0157372_10271126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1972	Open in IMG/M
3300013764\|Ga0120111_1001469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	9815	Open in IMG/M
3300013770\|Ga0120123_1030665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1115	Open in IMG/M
3300014052\|Ga0120109_1023461	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300014056\|Ga0120125_1089086	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	711	Open in IMG/M
3300014056\|Ga0120125_1178287	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	524	Open in IMG/M
3300014968\|Ga0157379_10731713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	930	Open in IMG/M
3300015168\|Ga0167631_1036906	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300015192\|Ga0167646_1000095	All Organisms → cellular organisms → Bacteria	26148	Open in IMG/M
3300015209\|Ga0167629_1002888	All Organisms → cellular organisms → Bacteria	6518	Open in IMG/M
3300015371\|Ga0132258_12552861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1277	Open in IMG/M
3300017695\|Ga0180121_10004198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	5689	Open in IMG/M
3300017787\|Ga0183260_10004908	All Organisms → cellular organisms → Bacteria	10574	Open in IMG/M
3300017787\|Ga0183260_10029823	All Organisms → cellular organisms → Bacteria	4124	Open in IMG/M
3300018082\|Ga0184639_10004479	All Organisms → cellular organisms → Bacteria	6389	Open in IMG/M
3300018482\|Ga0066669_11612247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	593	Open in IMG/M
3300019377\|Ga0190264_11478397	Not Available	588	Open in IMG/M
3300019884\|Ga0193741_1172991	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300019888\|Ga0193751_1001002	All Organisms → cellular organisms → Bacteria	19218	Open in IMG/M
3300019888\|Ga0193751_1099961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1118	Open in IMG/M
3300021445\|Ga0182009_10010008	All Organisms → cellular organisms → Bacteria	3255	Open in IMG/M
3300025854\|Ga0209176_10079397	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	758	Open in IMG/M
3300025903\|Ga0207680_10041909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2675	Open in IMG/M
3300025908\|Ga0207643_10170793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1312	Open in IMG/M
3300025917\|Ga0207660_10049082	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300025917\|Ga0207660_10353954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1177	Open in IMG/M
3300025920\|Ga0207649_10869049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	706	Open in IMG/M
3300025923\|Ga0207681_10686324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	851	Open in IMG/M
3300025930\|Ga0207701_10397943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1187	Open in IMG/M
3300025934\|Ga0207686_11478905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300025940\|Ga0207691_10040339	All Organisms → cellular organisms → Bacteria	4314	Open in IMG/M
3300025949\|Ga0207667_10629320	Not Available	1080	Open in IMG/M
3300025949\|Ga0207667_11669204	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	604	Open in IMG/M
3300025981\|Ga0207640_11655832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	577	Open in IMG/M
3300026023\|Ga0207677_10066074	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300026041\|Ga0207639_10576656	Not Available	1035	Open in IMG/M
3300026089\|Ga0207648_10632081	Not Available	988	Open in IMG/M
3300026095\|Ga0207676_12000965	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	578	Open in IMG/M
3300027637\|Ga0209818_1030318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1229	Open in IMG/M
3300027691\|Ga0209485_1082261	Not Available	881	Open in IMG/M
3300027691\|Ga0209485_1317853	Not Available	519	Open in IMG/M
3300028881\|Ga0307277_10319856	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	690	Open in IMG/M
3300032163\|Ga0315281_10149760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.44%
Host-Associated	Host-Associated	27.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.20%
Plants	Host-Associated → Plants	27.56%
Aquatic	Environmental → Aquatic	10.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.60%
Freshwater	Environmental → Aquatic → Freshwater	9.45%
Sediment	Environmental → Aquatic → Sediment	0.79%
Unclassified	Environmental → Terrestrial → Unclassified	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.60%
Loam	Environmental → Terrestrial → Soil → Loam	9.45%
Ice	Environmental → Aquatic → Freshwater → Ice	8.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.57%
Lake	Environmental → Aquatic → Freshwater → Lake	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	13.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.02%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	8.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.02%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	9.45%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	8.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.36%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.36%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Cryoconite Hole, Glacier Surface	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Cryoconite Hole, Glacier Surface	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011246	Glacer surface microbial communities from an Arctic cyroconite hole, Midre Lovenbreen, Svalbard, Norway (Sample 22)	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00794310	2088090008	Soil	MEDDLKKGWEQLAEGLTKAMAKLSEAIEKAKSEMPDAMKGINEEYLRVQEMLDKAVDKLR
Perma_A_C_02957360	2124908032	Soil	MEDDLKKGWEQLAEGLTKAMGKLSEAIEKAKAEMPDAMKGINEEYLRVQEMLDKAVDKLR
P1_C_02018650	2140918006	Soil	MEDDLKKGWEQLAEGLTKAMAKLSEAIEKAKAEMPDAMKGINEEYLRVQEMLDKAVDKLR
AL3A1W_12817782	3300000886	Permafrost	MNDELKKDWGQLEEGLTKAMAKLSEAIEKAKTEMPDAIKGINDEYLRVQEMLDK
Ga0062593_1000008237	3300004114	Soil	MEDELKKGWEQIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK*
Ga0062593_1001850282	3300004114	Soil	MEEELKRGWEQLEEGLTKAMGKLSEAIEKARADMPDAMKSINEEYLRVQEALDRAVDRLRK*
Ga0062589_1009168232	3300004156	Soil	MADELKKGWEQIEEGLTKAMGKLSDAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDKLRKK*
Ga0062589_1014714962	3300004156	Soil	GDIPMDDDLKKGWEQLEEGLTKAMGKLQEAIEKAKKEMPDAMKAVNDEYQRVQEALDRAVDKLRK*
Ga0062590_1001417713	3300004157	Soil	HQEASMEEELKRGWEQLEEGLTKAMGKLSEAIEKARADMPDAMKSINEEYLRVQEALDRAVDRLRK*
Ga0062595_1006860041	3300004479	Soil	MEEDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDRLRKS*
Ga0062592_1022133332	3300004480	Soil	MDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKIRKK*
Ga0062591_1016478792	3300004643	Soil	GLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKIRKK*
Ga0062594_1032542552	3300005093	Soil	MDDELKKGWEQLEEGLTKAMGRLQEAIEKAKKEMPDAMKTINDEYVRVQDALDRAVDKLRK*
Ga0066673_109061642	3300005175	Soil	MEDDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDKLRKS*
Ga0065715_108806002	3300005293	Miscanthus Rhizosphere	MDDELKKGWEQLEEGLTKAMSRLQEAIEKAKKEMPDAMKTINDEYLRVQDALDRAVDKLRK*
Ga0070690_1002629862	3300005330	Switchgrass Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQEALDRAVDKLRK*
Ga0070690_1014601291	3300005330	Switchgrass Rhizosphere	TMEDELKRGWEQLEEGLTKAMGKLSEAIKKAGVEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0070670_1021018831	3300005331	Switchgrass Rhizosphere	MEDELKRGWEQLEEGLTKAMGKLSEAIKKAGVEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0070689_1005806781	3300005340	Switchgrass Rhizosphere	MEDELKRGWEQLEEGLTTMGRLSEAIKKAGAEMPDAMKSIN
Ga0070661_1001592524	3300005344	Corn Rhizosphere	GWEQIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK*
Ga0070692_113023611	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MEDELKRGWEQLEEGLTKAMGKLSEAIKKAGAEMPDAMKSINEEYLRVQEA
Ga0070668_1021636901	3300005347	Switchgrass Rhizosphere	MEEELRKGWEQIEEGLTKAMGKLSEAIEKARADMPDAMKSINEEYLRVQEALDRAVDKLRKS*
Ga0070668_1022818781	3300005347	Switchgrass Rhizosphere	MDDELKKGWEQLEEGLTRAMSRLQEAIEKAKKEMPDAMKTINDEYVRVQDALDRAVDKLRK*
Ga0070669_1015648871	3300005353	Switchgrass Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQEA
Ga0070709_100167844	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDDELKKGWEQLEEGLTKAMARLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDRLRK*
Ga0070708_1009890321	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEDELKKGWEQLEEGLTKAMGKLSEAIEKAKTEMPDAMKAINDEYLRVQEALDKAVEKLRK*
Ga0066681_103450982	3300005451	Soil	MEDELKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLDRAVDKLRKS*
Ga0068867_1002876902	3300005459	Miscanthus Rhizosphere	VNFGALGGTMEEELKKGWEQIEEGLTKAMGKLSEAIEKTRADMPDAMKSINEEYLR
Ga0070707_1013299642	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEEDLKKGWEQLEEGLTKAIGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDKLRKS*
Ga0070697_1003208772	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEDELKKGWEQLEEGLTKAMGKLSEAIEKAKTEMPDAMKTINDEYLRVQEALDKAVDRLRKS*
Ga0070696_1008769842	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VEDDLKKGWENLEEGLTKAMGRLQEAIEKAKKEMPDAMKTINDEYLRVQEALDRAVDKLRK*
Ga0068854_1012012331	3300005578	Corn Rhizosphere	LEEGLTKAMGKLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0066654_104737652	3300005587	Soil	MEDDLKKGWEQLEEGLNKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDKLRKS*
Ga0068852_1026424152	3300005616	Corn Rhizosphere	QIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK*
Ga0068851_100953044	3300005834	Corn Rhizosphere	GWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDRLRKS*
Ga0068870_108104351	3300005840	Miscanthus Rhizosphere	EFDEFWLYSEETMEDELKRGWEQLEEGLTKAMGKLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0097691_10000307	3300006055	Arctic Peat Soil	MDDELKKSWEQLEEGLMKAMGRLSEAIEKAKAEMPDAMKGINDEYLRVQEMLDRAVDKLRKQ*
Ga0068871_1018067781	3300006358	Miscanthus Rhizosphere	MEDELKKGWEQIEQGLTKAMARLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK*
Ga0079217_100041415	3300006876	Agricultural Soil	MDEGLKKGWEQLEEGLTKAMGRLSEAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKLRKK*
Ga0079215_104393602	3300006894	Agricultural Soil	MDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKLRKK*
Ga0066793_104713312	3300009029	Prmafrost Soil	MDDELKKSWEQLEEGLMKAMGWLSEAIEKAKAEMPDAMKGINDEYLRVQEM
Ga0099829_106525642	3300009038	Vadose Zone Soil	MEDDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLDRAVERLRKS*
Ga0105241_105380812	3300009174	Corn Rhizosphere	PERNGGVMDDELKKGWEQLEEGLTKAMARLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDRLRK*
Ga0105241_123682162	3300009174	Corn Rhizosphere	MEDELKRGWEQLEEGLTKAMGRLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0126307_105921532	3300009789	Serpentine Soil	MDDGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKIRKK*
Ga0126308_110994002	3300010040	Serpentine Soil	ALEAAMDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKIRKK*
Ga0126312_109250951	3300010041	Serpentine Soil	MDEKLKKGWEQLEEGLTKAMGRLSDAIKKAEEEMPDAMKSINAEYLRVQEMLDRAVDKIRKK*
Ga0134127_107942882	3300010399	Terrestrial Soil	RALEAVMDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKIRKK*
Ga0105246_106124682	3300011119	Miscanthus Rhizosphere	MEDELKRGWEQLEEGLTKAMGKLSEAIKKAGVEMPDAMKSINEEYLRVQEALDRAV
Ga0137490_10009992	3300011246	Cryoconite Hole, Glacier Surface	MEDDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKGINEEYLRVQEMLDKAVDRLRK*
Ga0120114_10990132	3300011998	Permafrost	DWGQLEEGLTKAMAKLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDRAVDRLRKK*
Ga0120148_10273552	3300011999	Permafrost	MDDELKKGWEQLEEGLTKAMAKLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDRLRK*
Ga0120134_10503182	3300012004	Permafrost	MEDELKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLDRAVEKLRKN*
Ga0120118_10060812	3300012010	Permafrost	MNDELKKDWGQLEEGLTKAMAKLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDRLRK*
Ga0120139_10234382	3300012019	Permafrost	MEDEVKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEHLRVREALDKAVEKLRK*
Ga0120139_11398591	3300012019	Permafrost	MTDELKKGWEQIEEGLTKAMAKLSEAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDKLRKK*
Ga0136623_101381692	3300012045	Polar Desert Sand	MEDDMKKRWESLEADLKDAMRKLSEAIEKAKDEMPAAAKAINDEYLRVQAMLDKAVDRLRK*
Ga0136623_101987452	3300012045	Polar Desert Sand	VDDELKKRWEMLEAELRTAMGRLSEAIEKARAEMPAAAKAINDEYLRVQEMLDKAVEKLRK*
Ga0136634_100832372	3300012046	Polar Desert Sand	MEDELKKRWEMLEAELRTAMGRLSEAIEKARGEMPAAAKAINDEYLRVQAMLDGAVERLRK*
Ga0136621_10137894	3300012092	Polar Desert Sand	VDDELKKRWEMLEAELRTAMGRLSEAIEKARAEMPAAAKAINDEYLRVQEMLDKAVEKLRN*
Ga0136632_100556882	3300012093	Polar Desert Sand	MEDDMKKRWESLEADLKDAMRKLSEAIEKAKDEMPAAAKAINDEYLRVQAMLDKAVNRLRK*
Ga0137388_105306292	3300012189	Vadose Zone Soil	MEDDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDRLRKS*
Ga0137365_104312672	3300012201	Vadose Zone Soil	MEDDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDRAVDKLRKS*
Ga0137374_100176925	3300012204	Vadose Zone Soil	MEEELKKGWEQFEEGLTKAMGKLSEAIEKAKVEMPEAMKSINEEYLRVQEALDRAVDKLRK*
Ga0137374_106066912	3300012204	Vadose Zone Soil	MEVELKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDKLRKK*
Ga0137376_1000024211	3300012208	Vadose Zone Soil	MEEDLKRGWEQVEEGLTKAMGKLSEAIEKARAEMPDAMKTINDEYLRVQEALDKAVDKLRKN*
Ga0137376_104497142	3300012208	Vadose Zone Soil	MADELKKGWEQIEEGLTKAMGKLSEAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDKLRKK*
Ga0137376_107521542	3300012208	Vadose Zone Soil	ETHMADELKKGWEQIEEGLTKAMGKLSEAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDKLRKK*
Ga0137378_104535302	3300012210	Vadose Zone Soil	MEDDLKKNWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLNQAVEKLRKS*
Ga0137387_110792811	3300012349	Vadose Zone Soil	MEDELKKGWEQLEVGLTKAMGKLSEAIEKAKTEMPDAMKTINDEYLRVQEVLDRAV
Ga0137372_100150554	3300012350	Vadose Zone Soil	MNDDIKRGWEQVEEGLTTAMAKLSDAINKAKDEMPDAMKKINEEYQKVQEALDRAVDKLRK*
Ga0137372_105771701	3300012350	Vadose Zone Soil	MSMELTETDMADELKKGWEQIEEGLTKAMAKLSDAIKKAEAEMPDAMKAINQEYLRVQEMLDRAVDKLRNK*
Ga0137367_1000943511	3300012353	Vadose Zone Soil	MNDDIKRGWEQVEEGLTTAMAKLSDAINKAKDEMPDAMKKINEEYQKVQQALDRAVDKLRK*
Ga0137366_101084304	3300012354	Vadose Zone Soil	MEEELKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLDKAVDKLRK*
Ga0136630_12260091	3300012529	Polar Desert Sand	RWESLEADLKDAMRKLSEAIEKAKDEMPAAAKAINDEYLRVQAMLDKAVDRLRK*
Ga0136635_102821942	3300012530	Polar Desert Sand	RTQEGANAMDDEIKKRWESLEVDLKAAMARLSEAIDKARSEMPAAARAINDEYLRVQEMLDKAMDKLRK*
Ga0136611_102927752	3300012682	Polar Desert Sand	VDDELKKRWENVEAELKAAMAKLAQAIDKARDEMPAAAKAINDEYLRVQEMLDKAIDKLRK*
Ga0164300_101508112	3300012951	Soil	MDNELKKGWEQLEEGLTKAMKRLSDAINKAKEEMPDAMKTINDEYLRVQDALDKAVDKLRK*
Ga0164298_101076421	3300012955	Soil	MEDELKKGWEQIEQGLTKAMARLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAV
Ga0164303_101160732	3300012957	Soil	MEDQLKRGWEQIEEGLTKAMGKLSDAIQKAGDEMPGAMKSINEEYLRVQEALDRAVDKLRK*
Ga0157374_102400933	3300013296	Miscanthus Rhizosphere	SMEDELKKGWEQIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK*
Ga0163162_105737831	3300013306	Switchgrass Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQ
Ga0163162_125309311	3300013306	Switchgrass Rhizosphere	IPKFSAVSGGSMEDELKKGWEQIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK*
Ga0163162_128345051	3300013306	Switchgrass Rhizosphere	EEGLTKAMGRLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0157372_102711264	3300013307	Corn Rhizosphere	LKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDRLRKS*
Ga0120111_10014695	3300013764	Permafrost	MEEELKKGWEQLEEGLTKAMGKLSDAIEKAKSEMPDAMKSINDEYLRVQEMLDRAVDKLRK*
Ga0120123_10306652	3300013770	Permafrost	MTDELKKGWEQIEEGLTKAMAKLSEAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDRLRKK*
Ga0120109_10234612	3300014052	Permafrost	MNDELKKSWGQLEEGLTKAMAKLSEAIEKAKTEMPDAIKGINDEYLRVQEMLDKAVDRLRK*
Ga0120125_10890862	3300014056	Permafrost	DGGSMNDELKKSWGQLEEGLTKAMAKLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDRHRK*
Ga0120125_11782871	3300014056	Permafrost	MTDELKKGWEQIEEGLTKAMAKLSEAIKKAEAEMPDAMKSINQEYLRVQEMLDRAVDKLR
Ga0157379_107317132	3300014968	Switchgrass Rhizosphere	MEDELKRGWEQLEEGLTKAMGKLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLRK*
Ga0167631_10369061	3300015168	Glacier Forefield Soil	MDDELKKGWEQLEEGLTKAMAKLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDKLRK*
Ga0167646_100009515	3300015192	Glacier Forefield Soil	MDDELRKGWEQLEEGLTKAMARLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAVDRLRSK*
Ga0167629_10028883	3300015209	Glacier Forefield Soil	MDDELRKGWEQLEEGLTKAMAKLSEAIEKAKTEMPDAMKGINDEYLRVQEMLDKAADRLRTK*
Ga0132258_125528612	3300015371	Arabidopsis Rhizosphere	MEDDLKKGWEQLEEGLTKAMGKLQEAIEKAKKEMPDAMKTINDEYVRVQEALDRAVDKLRK*
Ga0180121_100041985	3300017695	Polar Desert Sand	MDDEIKARWESLEVDLKAAMTRLSEAIDKARSEMPAAARAINDEYLRVQEMLDRAMDKLR
Ga0183260_100049085	3300017787	Polar Desert Sand	VDDELKKRWEMLEAELRTAMGRLSEAIEKARAEMPAAAKAINDEYLRVQEMLDKAVEKLR
Ga0183260_100298234	3300017787	Polar Desert Sand	MEDDMKKRWESLEADLKDAMRKLSEAIEKAKDEMPAAAKAINDEYLRVQAMLDKAVDRLR
Ga0184639_100044793	3300018082	Groundwater Sediment	MADELKKGWEQLEEGLTKAMGRLSDAIEKAQAEMPDAMKSINEEYLRVQEMLDRAVDKLRKK
Ga0066669_116122472	3300018482	Grasslands Soil	MEDELKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEVLDRAVDKLRKS
Ga0190264_114783972	3300019377	Soil	MDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKLRKK
Ga0193741_11729912	3300019884	Soil	MDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKIRKK
Ga0193751_100100211	3300019888	Soil	MEQELKKGWEQLEEGLTKAMGRLSAAIDKARAEMPDAMKSINEEYLRVQDALDRAVDKLR
Ga0193751_10999612	3300019888	Soil	MEDDLKKGWEQLVEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQEALDKAVDKLRKS
Ga0182009_100100082	3300021445	Soil	MEDELKKGWEQIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLR
Ga0209176_100793972	3300025854	Arctic Peat Soil	MTEDNLKKGWEQLEEGLTKAMGRLSDAIQKAQAEMPDAMKSINQEYLRVQEMLDRAVDKLRK
Ga0207680_100419093	3300025903	Switchgrass Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQEALDRAVDKLR
Ga0207643_101707932	3300025908	Miscanthus Rhizosphere	MEDELKRGWEQLEEGLTKAMGKLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLR
Ga0207660_100490826	3300025917	Corn Rhizosphere	ELKKGWEQIEEGLTKAMGKLSEAIEKARADMPDAMKSINEEYLRVQEALDRAVDKLRK
Ga0207660_103539541	3300025917	Corn Rhizosphere	MEEELKKGWEQIEEGLTKAMGKLSEAIEKARADMPDAMKSINEEYLRVQEA
Ga0207649_108690492	3300025920	Corn Rhizosphere	DELKKGWEQIEQGLTKAMGRLSDAIEKAKNEMPDAMKTINEEYMHVQEALDRAVDKLRK
Ga0207681_106863242	3300025923	Switchgrass Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQEALDRAVAKLR
Ga0207701_103979432	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDDELKKGWEQLEEGLTKAMGRLQEAIEKAKKEMPDAMKTINDEYVRVQDALDRAVDKLR
Ga0207686_114789051	3300025934	Miscanthus Rhizosphere	EEGLTKAMGRLQEAIEKAKKEMPDAMKTINDEYVRVQDALDRAVDKLRK
Ga0207691_100403395	3300025940	Miscanthus Rhizosphere	MEDELKRGWEQLEEGLTKAMGKLSEAIKKAGVEMPDAMKSINEEYLRVQEALDRAVDKLR
Ga0207667_106293202	3300025949	Corn Rhizosphere	MDDELKKGWEQLEEGLTKAMARLSEAIEKAKTEMPDAMKGINDEYLRVQ
Ga0207667_116692042	3300025949	Corn Rhizosphere	MEEDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTINDEYLRVQDALDKAVDRLRKS
Ga0207640_116558322	3300025981	Corn Rhizosphere	LEEGLTKAMGKLSEAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLRK
Ga0207677_100660744	3300026023	Miscanthus Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQE
Ga0207639_105766561	3300026041	Corn Rhizosphere	MEEDLKKGWEQLEEGLTKAMGKLSEAIEKAKAEMPDAMKTIND
Ga0207648_106320811	3300026089	Miscanthus Rhizosphere	MEEELKKGWEQIEEGLTKAMGKLSEAIEKTRADMPDAMKSINEEYLRVQE
Ga0207676_120009651	3300026095	Switchgrass Rhizosphere	MEDELKRGWEQIEEGLTKAMGKLSEAIKKAGDEMPGAMKSINEEYLRVQEALD
Ga0209818_10303182	3300027637	Agricultural Soil	MDEGLKKGWEQLEEGLTKAMGRLSEAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKLRKK
Ga0209485_10822611	3300027691	Agricultural Soil	MDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLR
Ga0209485_13178531	3300027691	Agricultural Soil	AMDEGLKKGWEQLEEGLTKAMGRLSDAIKKAEAEMPDAMKSINAEYLRVQEMLDRAVDKLRKK
Ga0307277_103198561	3300028881	Soil	MEDELKRGWEQLEEGLTKAMGKLSDAIKKAGAEMPDAMKSINEEYLRVQEALDRAVDKLR
Ga0315281_101497602	3300032163	Sediment	MGDELKTGWEQLEEGLTKAMGRLSDAIEKAKVEMPDAMKAINEEYLRVQEKLDQAVDKLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065820

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences