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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F065791 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 127 |
| Average Sequence Length | 46 residues |
| Representative Sequence | ALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Number of Associated Samples | 97 |
| Number of Associated Scaffolds | 127 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 100.00 % |
| % of genes from short scaffolds (< 2000 bps) | 95.28 % |
| Associated GOLD sequencing projects | 79 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (76.378 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (45.669 % of family members) |
| Environment Ontology (ENVO) | Unclassified (70.866 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (83.465 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 47.73% Coil/Unstructured: 52.27% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 127 Family Scaffolds |
|---|---|---|
| PF13554 | DUF4128 | 57.48 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 76.38 % |
| All Organisms | root | All Organisms | 23.62 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 45.67% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 7.09% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 6.30% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 4.72% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 4.72% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 3.15% |
| Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 3.15% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 3.94% |
| Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment | 1.57% |
| Marine | Environmental → Aquatic → Marine → Coastal → Sediment → Marine | 1.57% |
| Marine Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment | 1.57% |
| Sackhole Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine | 1.57% |
| Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.79% |
| Marine Sediment | Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment | 0.79% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.79% |
| Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Sediment | 0.79% |
| Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 0.79% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.79% |
| Marine Surface Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water | 0.79% |
| Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.79% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.79% |
| Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 0.79% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 0.79% |
| Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 0.79% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 0.79% |
| Marine Water | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water | 0.79% |
| Sediment | Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment | 0.79% |
| Saline Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water | 0.79% |
| Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 0.79% |
| Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment | 0.79% |
| Macroalgal Surface | Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface | 0.79% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
| 3300000949 | Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94 | Host-Associated | Open in IMG/M |
| 3300001748 | Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m) | Environmental | Open in IMG/M |
| 3300004461 | Marine viral communities from Newfoundland, Canada BC-2 | Environmental | Open in IMG/M |
| 3300004829 | Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVs | Environmental | Open in IMG/M |
| 3300005600 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 | Environmental | Open in IMG/M |
| 3300005612 | Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 | Environmental | Open in IMG/M |
| 3300005837 | Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18 | Environmental | Open in IMG/M |
| 3300006027 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006029 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006467 | Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935 | Environmental | Open in IMG/M |
| 3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006803 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA | Environmental | Open in IMG/M |
| 3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
| 3300006868 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA | Environmental | Open in IMG/M |
| 3300006870 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA | Environmental | Open in IMG/M |
| 3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
| 3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
| 3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
| 3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
| 3300007229 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA | Environmental | Open in IMG/M |
| 3300007234 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA | Environmental | Open in IMG/M |
| 3300007276 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 | Environmental | Open in IMG/M |
| 3300007345 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 | Environmental | Open in IMG/M |
| 3300007640 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 | Environmental | Open in IMG/M |
| 3300009000 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG | Environmental | Open in IMG/M |
| 3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
| 3300009426 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 | Environmental | Open in IMG/M |
| 3300009433 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 | Environmental | Open in IMG/M |
| 3300010151 | Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG | Environmental | Open in IMG/M |
| 3300010153 | Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG | Environmental | Open in IMG/M |
| 3300010155 | Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG | Environmental | Open in IMG/M |
| 3300010368 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA | Environmental | Open in IMG/M |
| 3300011129 | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02 | Environmental | Open in IMG/M |
| 3300013010 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA | Environmental | Open in IMG/M |
| 3300017697 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2) | Environmental | Open in IMG/M |
| 3300017726 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 | Environmental | Open in IMG/M |
| 3300017768 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2) | Environmental | Open in IMG/M |
| 3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
| 3300017782 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19 | Environmental | Open in IMG/M |
| 3300017783 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10 | Environmental | Open in IMG/M |
| 3300017786 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18 | Environmental | Open in IMG/M |
| 3300018048 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018420 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300019708 | Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MG | Environmental | Open in IMG/M |
| 3300019749 | Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_4-5_MG | Environmental | Open in IMG/M |
| 3300019751 | Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG | Environmental | Open in IMG/M |
| 3300020178 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300021335 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540 | Environmental | Open in IMG/M |
| 3300021371 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497 | Environmental | Open in IMG/M |
| 3300021373 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282 | Environmental | Open in IMG/M |
| 3300021389 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127 | Environmental | Open in IMG/M |
| 3300021957 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D | Environmental | Open in IMG/M |
| 3300021960 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D | Environmental | Open in IMG/M |
| 3300021961 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D | Environmental | Open in IMG/M |
| 3300022053 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2) | Environmental | Open in IMG/M |
| 3300022063 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2) | Environmental | Open in IMG/M |
| 3300022069 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2) | Environmental | Open in IMG/M |
| 3300022072 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3) | Environmental | Open in IMG/M |
| 3300022164 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2) | Environmental | Open in IMG/M |
| 3300022168 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2) | Environmental | Open in IMG/M |
| 3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
| 3300022183 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3) | Environmental | Open in IMG/M |
| 3300022187 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3) | Environmental | Open in IMG/M |
| 3300022218 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13 | Environmental | Open in IMG/M |
| 3300022923 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG | Environmental | Open in IMG/M |
| 3300023237 | Saline water microbial communities from Ace Lake, Antarctica - #367 | Environmental | Open in IMG/M |
| 3300024062 (restricted) | Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1 | Environmental | Open in IMG/M |
| 3300024520 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1 | Environmental | Open in IMG/M |
| 3300025084 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025543 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025632 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes) | Environmental | Open in IMG/M |
| 3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
| 3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
| 3300025671 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes) | Environmental | Open in IMG/M |
| 3300025687 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025751 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025759 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes) | Environmental | Open in IMG/M |
| 3300025806 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025853 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes) | Environmental | Open in IMG/M |
| 3300025887 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025889 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes) | Environmental | Open in IMG/M |
| 3300025890 | Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes) | Environmental | Open in IMG/M |
| 3300026462 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 17R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300027170 | Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35 (SPAdes) | Environmental | Open in IMG/M |
| 3300027757 | Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes) | Environmental | Open in IMG/M |
| 3300027917 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes) | Environmental | Open in IMG/M |
| 3300031519 | Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2 | Environmental | Open in IMG/M |
| 3300031774 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915 | Environmental | Open in IMG/M |
| 3300032277 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite | Environmental | Open in IMG/M |
| 3300033429 | Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2 | Environmental | Open in IMG/M |
| 3300034374 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4) | Environmental | Open in IMG/M |
| 3300034375 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOWin2010_101235413 | 3300000117 | Marine | EDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| BBAY94_101358983 | 3300000949 | Macroalgal Surface | IPALGLAVEPDDEDQIIGNGDTVNIVSVVTIFSNGAAVCYLCDVRS* |
| JGI11772J19994_10135781 | 3300001748 | Saline Water And Sediment | RGSRRCVIPALGLAVEPDDEDQIIGQGDTVSVVRVNTIFSNGVKICYICEVSE* |
| Ga0066223_10093646 | 3300004461 | Marine | ALGLAVDPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0068515_1193321 | 3300004829 | Marine Water | VVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0070726_105309962 | 3300005600 | Marine Sediment | PDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0070723_102765451 | 3300005612 | Marine Sediment | GLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0078893_112954354 | 3300005837 | Marine Surface Water | LAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0075462_102336501 | 3300006027 | Aqueous | EPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0075466_10558544 | 3300006029 | Aqueous | TRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0075466_10869311 | 3300006029 | Aqueous | CLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE* |
| Ga0075466_11230181 | 3300006029 | Aqueous | DDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0099972_103367541 | 3300006467 | Marine | PALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0099972_132666271 | 3300006467 | Marine | RKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0098048_11192043 | 3300006752 | Marine | VEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0070749_101140301 | 3300006802 | Aqueous | TRKCVISALGLAVEPDDEDQILGNGDTVNIISVTTIFSNGSKICYLCDVRE* |
| Ga0070749_101822371 | 3300006802 | Aqueous | GTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0070749_104870123 | 3300006802 | Aqueous | RGTRKCVISALGLAVEPDDEDQILGNGDTVNIISVTTIFSNGSKICYLCDVRE* |
| Ga0075467_101241101 | 3300006803 | Aqueous | GTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0075467_102310901 | 3300006803 | Aqueous | CLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSGGVALCYICDVRE* |
| Ga0070754_101631801 | 3300006810 | Aqueous | GIIANVDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNIISVVTIFSNGVKICFLCDVRE* |
| Ga0070754_102549023 | 3300006810 | Aqueous | LVPALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLC |
| Ga0070754_104277841 | 3300006810 | Aqueous | LAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0070754_104400101 | 3300006810 | Aqueous | VEPDDEDQIIGQGDTVSVVRVNTIFSNGVKICYICEVSE* |
| Ga0075481_101010271 | 3300006868 | Aqueous | VDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNIISVVTIFSNGVKICFLCDVRE* |
| Ga0075479_103182123 | 3300006870 | Aqueous | DDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0075479_103816671 | 3300006870 | Aqueous | VIPALGLAVEPDDEDQIIGQGDTVSVVRVNTIFSNGVKICYICEVSE* |
| Ga0070750_103585601 | 3300006916 | Aqueous | ALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0070748_12276971 | 3300006920 | Aqueous | KCLISASSLAVVPDDEDQVTGNGDTVNVLSVVTIFSNGIAICYICDVRE* |
| Ga0070748_12397943 | 3300006920 | Aqueous | EPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0070748_12447852 | 3300006920 | Aqueous | VVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE* |
| Ga0098060_10707523 | 3300006921 | Marine | GTRKCVIPALGISVDPDDEDQILGNGDTVNIISVVTIFSNGDKVCFLCDVRE* |
| Ga0098050_11107043 | 3300006925 | Marine | EDQITGNGDTVNILSVVTIFSSGVALCYICDVRE* |
| Ga0075468_100734704 | 3300007229 | Aqueous | AVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0075468_100881563 | 3300007229 | Aqueous | AVVPDDEDQITGNGDTVNVLSVVTIFSNGIAICYICDVRE* |
| Ga0075468_101615941 | 3300007229 | Aqueous | DEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0075468_101794303 | 3300007229 | Aqueous | VPDDEDQITGNGDTVNILSVVTIFSNGIAICYICDVRE* |
| Ga0075468_102205952 | 3300007229 | Aqueous | SASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE* |
| Ga0075460_101512521 | 3300007234 | Aqueous | GIIFNVDQVRRGTRKCVISALGLAVEPDDEDQIIGNGDTVKIVSVRTIFSNGTKLCYICDVRE* |
| Ga0070747_12609802 | 3300007276 | Aqueous | VVPDDEDQITGNGDTVNILSVVTIFSNGIAICYICDVRE* |
| Ga0070752_12703013 | 3300007345 | Aqueous | RKCVVPALGLAVDPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0070752_13563591 | 3300007345 | Aqueous | VDPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0070751_13293481 | 3300007640 | Aqueous | EPDDEDQIIGQGDTVSVVRVNTIFSNGVKICYICEVSE* |
| Ga0102960_11007113 | 3300009000 | Pond Water | EGIIFNVDQIRRGTRKCVISAVGLAVEPDDDDEILGSGDKVKVVSVRTIFSDGNKLCYICDVRE* |
| Ga0115566_105507213 | 3300009071 | Pelagic Marine | GLAVEPDDEDQIIGSGDTVNIVSVVTIFSNGTKICFLCDVRE* |
| Ga0115547_10996193 | 3300009426 | Pelagic Marine | DQGIIANVDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0115545_10586051 | 3300009433 | Pelagic Marine | PDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE* |
| Ga0098061_11095113 | 3300010151 | Marine | RKCVIPALGISVDPDDEDQILGNGDTVNIISVVTIFSNGDKVCFLCDVRE* |
| Ga0098059_12290333 | 3300010153 | Marine | DEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE* |
| Ga0098047_103804642 | 3300010155 | Marine | PALGISVDPDDEDQILGNGDTVNIISVVTIFSNGDKVCFLCDVRE* |
| Ga0129324_102055571 | 3300010368 | Freshwater To Marine Saline Gradient | RGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE* |
| Ga0151672_1636051 | 3300011129 | Marine | RGIRKCVIPALGLAVEPDTDDLVVGNGDNVKIISVVTIFSAGTRICYLCDVRE* |
| Ga0129327_101728273 | 3300013010 | Freshwater To Marine Saline Gradient | RKCLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE* |
| Ga0180120_102233703 | 3300017697 | Freshwater To Marine Saline Gradient | EPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0180120_102753952 | 3300017697 | Freshwater To Marine Saline Gradient | RKCLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0180120_103779262 | 3300017697 | Freshwater To Marine Saline Gradient | VVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0181381_10505043 | 3300017726 | Seawater | CVIPALGLTVEPDDEDQIVGSGDIVSIVSVVTIFSNGIKICFLCDVRE |
| Ga0181381_10610533 | 3300017726 | Seawater | ANLDEIRRGTRKCVIPALGLTVEPDDEDQILGNGDTVSIISVVTIFSNGAKICFLCDVRE |
| Ga0187220_10470474 | 3300017768 | Seawater | GTRKCVVPALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0181394_10705594 | 3300017776 | Seawater | PALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0181380_11179701 | 3300017782 | Seawater | LEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0181380_11668301 | 3300017782 | Seawater | IPALGISVDPDDEDQILGNGDTVNIISVVTIFSNGDKVCFLCDVRE |
| Ga0181379_10649891 | 3300017783 | Seawater | ALGLTVEPDDEDQILGNGDTVSIISVVTIFSNGAKICFLCDVRE |
| Ga0181424_102852403 | 3300017786 | Seawater | ALGLEVEPDDEDQNIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0181606_105266171 | 3300018048 | Salt Marsh | ALGLAVEPDDEDQILGNGDTVNIVSVTTIFSNGSKICYLCDVRE |
| Ga0181563_107510072 | 3300018420 | Salt Marsh | PALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0194016_10590981 | 3300019708 | Sediment | PDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0193983_10241111 | 3300019749 | Sediment | VDPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0194029_10398863 | 3300019751 | Freshwater | TRKCVVPALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0181599_13295812 | 3300020178 | Salt Marsh | AVEPDDEDQILGNGDTVNIVSVTTIFSNGSKICYLCDVRE |
| Ga0213867_12573181 | 3300021335 | Seawater | AVEPDDEDQIIGQGDTVSVVRVNTIFSNGVKICYICEVSE |
| Ga0213863_100667584 | 3300021371 | Seawater | GIIANVDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0213865_101938293 | 3300021373 | Seawater | LAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0213865_102529253 | 3300021373 | Seawater | IRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0213868_105067883 | 3300021389 | Seawater | DDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0222717_100671831 | 3300021957 | Estuarine Water | RGTRKCVVPALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0222717_102890683 | 3300021957 | Estuarine Water | GLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0222717_102909243 | 3300021957 | Estuarine Water | DEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0222715_103322431 | 3300021960 | Estuarine Water | RGTRKCVVPALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0222715_103579941 | 3300021960 | Estuarine Water | GLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0222714_104502341 | 3300021961 | Estuarine Water | VEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0212030_10098594 | 3300022053 | Aqueous | AVVPDDEDQITGNGDTVNILSVVTIFSNGIAICYICDVRE |
| Ga0212029_10059971 | 3300022063 | Aqueous | SALGLAVEPDDEDQILGNGDTVNIVSVTTIFSNGSKICYLCDVRE |
| Ga0212026_10486183 | 3300022069 | Aqueous | RRGTRKCVISALGLAVEPDDEDQIIGNGDTVKIVSVRTIFSNGTKLCYICDVRE |
| Ga0196889_10117134 | 3300022072 | Aqueous | GEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0212022_10322103 | 3300022164 | Aqueous | IVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0212027_10258541 | 3300022168 | Aqueous | EPDDEDQIIGNGDTVKIVSVRTIFSNGTKLCYICDVRE |
| Ga0196887_11199531 | 3300022178 | Aqueous | AVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0196891_10661183 | 3300022183 | Aqueous | GTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0196899_10852611 | 3300022187 | Aqueous | GLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0224502_101252841 | 3300022218 | Sediment | TRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0255783_101338454 | 3300022923 | Salt Marsh | EPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0222650_10108615 | 3300023237 | Saline Water | LAVVPDDEDQITGNGDTVNVLSVVTIFSNGIAICYICDVRE |
| (restricted) Ga0255039_102305443 | 3300024062 | Seawater | AVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| (restricted) Ga0255047_104058691 | 3300024520 | Seawater | QGIIANVDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0208298_10074977 | 3300025084 | Marine | RGTRKCVIPALGLTVEPDDEDQILGSGDTVNIVSVVTIFSAGTKICYLCDVRE |
| Ga0208919_10431554 | 3300025128 | Marine | RGIRKCVIPALGLAVEPDTDDLVVGNGDNVKIISVVTIFSAGTRICYLCDVRE |
| Ga0208148_10599161 | 3300025508 | Aqueous | CLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0208303_10720361 | 3300025543 | Aqueous | RGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0209194_11171171 | 3300025632 | Pelagic Marine | AVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208643_11422072 | 3300025645 | Aqueous | SSLAVVPDDEDQITGNGDTVNILSVVTIFSGGVALCYICDVRE |
| Ga0208134_10526941 | 3300025652 | Aqueous | DDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208134_10601451 | 3300025652 | Aqueous | RGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208898_10272195 | 3300025671 | Aqueous | AVDPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0208019_10576651 | 3300025687 | Aqueous | EIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0208150_11668161 | 3300025751 | Aqueous | RRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208899_10987324 | 3300025759 | Aqueous | LMNVDQVRRGMRKCLISALDNVEPYDQDVILGNGDAVTITSVTTIFSAGTAICYICNVEE |
| Ga0208545_10773611 | 3300025806 | Aqueous | DEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208545_11258303 | 3300025806 | Aqueous | DEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0208543_10487811 | 3300025810 | Aqueous | RGSRRCVVPALGLAVEPDDEDQILGQGDTVSIVRVNTIFSAGVKICYICEVVE |
| Ga0208645_10381495 | 3300025853 | Aqueous | QGIIANVDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNIISVVTIFSNGVKICFLCDVRE |
| Ga0208645_11513061 | 3300025853 | Aqueous | QGIIANVDEIRRGTRKCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208544_101739911 | 3300025887 | Aqueous | KCLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0208644_11295741 | 3300025889 | Aqueous | KCVVPALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKLCFLCDVRE |
| Ga0208644_11754203 | 3300025889 | Aqueous | RGTRKCVISALGLAVEPDDEDQILGNGDTVNIISVTTIFSNGSKICYLCDVRE |
| Ga0209631_104138083 | 3300025890 | Pelagic Marine | LGLAVEPDDEDQVIGSGDTVNIVSVVTIFSNGTKVCFLCDVRE |
| Ga0247568_10590951 | 3300026462 | Seawater | PALGLTVEPDDEDQIVGSGDIVSIVSVVTIFSNGVKICFLCDVRE |
| Ga0208963_10291391 | 3300027170 | Marine | IIANVDEIRRGTRKCVVPALGLEVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0208671_103432301 | 3300027757 | Estuarine | RRGTRKCLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0209536_1005431161 | 3300027917 | Marine Sediment | RRGTRKCVIPALGLAVEPDDEDQIIGNGDTVNIVSVVTIFSNGAAVCYLCDVRS |
| Ga0307488_105766692 | 3300031519 | Sackhole Brine | VVPDDEDQITGNGDTVNVLSVVTIFSNGIAICYICDVRE |
| Ga0307488_106146293 | 3300031519 | Sackhole Brine | AVVPDDEDQITGNGDTVNVLSVVTIFSNGIAICYICDVRE |
| Ga0315331_105111201 | 3300031774 | Seawater | SNRKCVIPALGLIVEPDDEDQIVGSGDTVSIVSVVTIFSNGVKICFLCDVRE |
| Ga0316202_106036611 | 3300032277 | Microbial Mat | TRKCLISASSLAVVPDDEDQITGNGDTVNILSVVTIFSSGVALCYICDVRE |
| Ga0316193_112247472 | 3300033429 | Sediment | VPDDEDQITGNGDTVNVLSVVTIFSNGIAICYICDVRE |
| Ga0348335_089556_839_1006 | 3300034374 | Aqueous | IRRGTRKCVVPALGLAVDPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
| Ga0348336_104974_2_136 | 3300034375 | Aqueous | ALGLAVEPDDEDQIIGNGDTVNVISVVTIFSNGVKICFLCDVRE |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |