NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065780

Metagenome / Metatranscriptome Family F065780

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065780
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 53 residues
Representative Sequence MKRIITYIMDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDPE
Number of Associated Samples 97
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 73.23 %
% of genes near scaffold ends (potentially truncated) 23.62 %
% of genes from short scaffolds (< 2000 bps) 68.50 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Duplodnaviria (81.890 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(18.110 % of family members)
Environment Ontology (ENVO) Unclassified
(59.055 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(59.843 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 56.63%    β-sheet: 0.00%    Coil/Unstructured: 43.37%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF02557VanY 14.96
PF09588YqaJ 3.94
PF07691PA14 3.15
PF01402RHH_1 2.36
PF02195ParBc 2.36
PF02467Whib 1.57
PF05065Phage_capsid 0.79
PF13469Sulfotransfer_3 0.79
PF12705PDDEXK_1 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG1876LD-carboxypeptidase LdcB, LAS superfamilyCell wall/membrane/envelope biogenesis [M] 14.96
COG2173D-alanyl-D-alanine dipeptidaseCell wall/membrane/envelope biogenesis [M] 14.96
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.28 %
UnclassifiedrootN/A4.72 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003393|JGI25909J50240_1000474All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C49310289Open in IMG/M
3300003393|JGI25909J50240_1016044All Organisms → Viruses → Predicted Viral1769Open in IMG/M
3300003499|JGI25930J51415_1036315Not Available875Open in IMG/M
3300005580|Ga0049083_10121488All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493900Open in IMG/M
3300005581|Ga0049081_10060775All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931424Open in IMG/M
3300005581|Ga0049081_10063860All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1385Open in IMG/M
3300005581|Ga0049081_10079877All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1227Open in IMG/M
3300005581|Ga0049081_10105676All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1048Open in IMG/M
3300005581|Ga0049081_10285617Not Available571Open in IMG/M
3300005583|Ga0049085_10221648All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493624Open in IMG/M
3300005584|Ga0049082_10189111All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493707Open in IMG/M
3300005758|Ga0078117_1118009All Organisms → Viruses → Predicted Viral1968Open in IMG/M
3300005805|Ga0079957_1030694All Organisms → Viruses → Predicted Viral3563Open in IMG/M
3300005805|Ga0079957_1046644All Organisms → Viruses → Predicted Viral2691Open in IMG/M
3300005805|Ga0079957_1131180All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931306Open in IMG/M
3300005805|Ga0079957_1320320All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493690Open in IMG/M
3300005943|Ga0073926_10069547All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493696Open in IMG/M
3300006484|Ga0070744_10046782All Organisms → Viruses → Predicted Viral1271Open in IMG/M
3300006802|Ga0070749_10723439All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493531Open in IMG/M
3300006805|Ga0075464_10557084All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493704Open in IMG/M
3300006863|Ga0075459_1000576All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5660Open in IMG/M
3300006863|Ga0075459_1040448All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493784Open in IMG/M
3300007169|Ga0102976_1055600All Organisms → Viruses → Predicted Viral4955Open in IMG/M
3300007346|Ga0070753_1043401All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931876Open in IMG/M
3300007363|Ga0075458_10007182All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3570Open in IMG/M
3300007538|Ga0099851_1026137All Organisms → cellular organisms → Bacteria2349Open in IMG/M
3300007621|Ga0102872_1214174All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493503Open in IMG/M
3300007670|Ga0102862_1054282All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493976Open in IMG/M
3300007734|Ga0104986_1720All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage25799Open in IMG/M
3300007972|Ga0105745_1145479All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493723Open in IMG/M
3300007972|Ga0105745_1203597All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493623Open in IMG/M
3300007973|Ga0105746_1142664All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493804Open in IMG/M
3300008962|Ga0104242_1078149All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493550Open in IMG/M
3300009056|Ga0102860_1124157All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493723Open in IMG/M
3300009068|Ga0114973_10000431All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage31651Open in IMG/M
3300009164|Ga0114975_10063959All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2152Open in IMG/M
3300009181|Ga0114969_10020110All Organisms → Viruses → Predicted Viral4719Open in IMG/M
3300010293|Ga0116204_1070707All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1254Open in IMG/M
3300010293|Ga0116204_1071224All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931249Open in IMG/M
3300010354|Ga0129333_11283036All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493606Open in IMG/M
3300011010|Ga0139557_1057275All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493658Open in IMG/M
3300011113|Ga0151517_1528All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage13524Open in IMG/M
3300011995|Ga0153800_1000232All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5530Open in IMG/M
3300012000|Ga0119951_1000595All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage23459Open in IMG/M
3300012000|Ga0119951_1004539All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6848Open in IMG/M
3300012006|Ga0119955_1015796All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932727Open in IMG/M
3300012013|Ga0153805_1000353All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C49310232Open in IMG/M
3300012017|Ga0153801_1021563All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931145Open in IMG/M
3300013004|Ga0164293_10148175All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931747Open in IMG/M
(restricted) 3300013126|Ga0172367_10028043All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5009Open in IMG/M
(restricted) 3300013126|Ga0172367_10149789All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931543Open in IMG/M
(restricted) 3300013137|Ga0172375_10317088All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931120Open in IMG/M
3300013372|Ga0177922_10128934All Organisms → Viruses → Predicted Viral1702Open in IMG/M
3300013372|Ga0177922_10481936All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493547Open in IMG/M
3300013372|Ga0177922_10801435All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931188Open in IMG/M
3300013372|Ga0177922_10811850All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493705Open in IMG/M
3300013372|Ga0177922_10919115All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage760Open in IMG/M
(restricted) 3300014720|Ga0172376_10390774All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493802Open in IMG/M
3300015050|Ga0181338_1043142All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493667Open in IMG/M
3300017722|Ga0181347_1062026All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1113Open in IMG/M
3300017723|Ga0181362_1024431Not Available1295Open in IMG/M
3300017723|Ga0181362_1082430Not Available648Open in IMG/M
3300017736|Ga0181365_1027722All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1429Open in IMG/M
3300017736|Ga0181365_1052728All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931014Open in IMG/M
3300017761|Ga0181356_1189379All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493615Open in IMG/M
3300017774|Ga0181358_1256172All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493548Open in IMG/M
3300017777|Ga0181357_1066893All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931385Open in IMG/M
3300017777|Ga0181357_1116033All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931007Open in IMG/M
3300017780|Ga0181346_1125306All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493981Open in IMG/M
3300017780|Ga0181346_1132251All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493947Open in IMG/M
3300017788|Ga0169931_10043674All Organisms → Viruses → Predicted Viral4977Open in IMG/M
3300017963|Ga0180437_10002021All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage33580Open in IMG/M
3300018416|Ga0181553_10695776All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493532Open in IMG/M
3300018420|Ga0181563_10308391All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493923Open in IMG/M
3300018420|Ga0181563_10730084All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493545Open in IMG/M
3300019784|Ga0181359_1025134All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932276Open in IMG/M
3300019784|Ga0181359_1076014All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1266Open in IMG/M
3300019784|Ga0181359_1091329All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931128Open in IMG/M
3300020519|Ga0208223_1038725All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493579Open in IMG/M
3300021959|Ga0222716_10386003All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493818Open in IMG/M
3300021960|Ga0222715_10023234All Organisms → Viruses → Predicted Viral4593Open in IMG/M
3300021961|Ga0222714_10056090All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932694Open in IMG/M
3300021962|Ga0222713_10498008All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage729Open in IMG/M
3300021963|Ga0222712_10021176All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5400Open in IMG/M
3300021963|Ga0222712_10399430All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493836Open in IMG/M
3300021963|Ga0222712_10438181All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes786Open in IMG/M
3300022190|Ga0181354_1008251All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932959Open in IMG/M
3300022190|Ga0181354_1196270All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493604Open in IMG/M
3300022198|Ga0196905_1005738All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4343Open in IMG/M
3300022407|Ga0181351_1142158All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493874Open in IMG/M
3300022752|Ga0214917_10072152All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932163Open in IMG/M
3300022752|Ga0214917_10119772All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931472Open in IMG/M
3300023179|Ga0214923_10068688All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932559Open in IMG/M
3300023184|Ga0214919_10001397All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes39633Open in IMG/M
3300024346|Ga0244775_11543367All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493507Open in IMG/M
3300024490|Ga0255185_1028880All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493783Open in IMG/M
3300024510|Ga0255187_1015606All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931074Open in IMG/M
3300024539|Ga0255231_1013118All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931251Open in IMG/M
3300025115|Ga0209835_1162699All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493536Open in IMG/M
3300025635|Ga0208147_1002970All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5117Open in IMG/M
3300025655|Ga0208795_1122827All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493674Open in IMG/M
3300025889|Ga0208644_1076544All Organisms → Viruses → Predicted Viral1731Open in IMG/M
3300026902|Ga0209851_1001000All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4933696Open in IMG/M
3300027608|Ga0208974_1015644All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2400Open in IMG/M
3300027621|Ga0208951_1183731All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493529Open in IMG/M
3300027746|Ga0209597_1037616All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4932491Open in IMG/M
3300027754|Ga0209596_1016435All Organisms → Viruses → Predicted Viral4589Open in IMG/M
3300027763|Ga0209088_10379099All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493551Open in IMG/M
3300027804|Ga0209358_10262500Not Available864Open in IMG/M
3300028269|Ga0255193_1024709All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493858Open in IMG/M
3300029930|Ga0119944_1007578All Organisms → Viruses → Predicted Viral1695Open in IMG/M
3300029933|Ga0119945_1008103All Organisms → Viruses → Predicted Viral1408Open in IMG/M
3300031746|Ga0315293_10906889All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493636Open in IMG/M
3300031997|Ga0315278_11068414All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes800Open in IMG/M
3300033978|Ga0334977_0069628All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931919Open in IMG/M
3300033981|Ga0334982_0009035All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5967Open in IMG/M
3300033981|Ga0334982_0336566All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage701Open in IMG/M
3300033995|Ga0335003_0479219Not Available517Open in IMG/M
3300033996|Ga0334979_0077344All Organisms → Viruses → Predicted Viral2107Open in IMG/M
3300033996|Ga0334979_0174924All Organisms → Viruses → Predicted Viral1282Open in IMG/M
3300034023|Ga0335021_0013897All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5419Open in IMG/M
3300034063|Ga0335000_0012729All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6489Open in IMG/M
3300034064|Ga0335001_0185725All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1165Open in IMG/M
3300034071|Ga0335028_0278561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4931000Open in IMG/M
3300034096|Ga0335025_0002381All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes14644Open in IMG/M
3300034112|Ga0335066_0006800All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes8289Open in IMG/M
3300034116|Ga0335068_0557457All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C493522Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater18.11%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake17.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.24%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.66%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic7.87%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.51%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake4.72%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake3.15%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater3.15%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water2.36%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.36%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.36%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.36%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.57%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic1.57%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.57%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand1.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.79%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.79%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.79%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.79%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.79%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.79%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.79%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003499Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DNEnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005758Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300005943Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300006863Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNAEnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007621Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3EnvironmentalOpen in IMG/M
3300007670Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3EnvironmentalOpen in IMG/M
3300007734Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015JanEnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300009056Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300010293Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300011113Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015SepEnvironmentalOpen in IMG/M
3300011995Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012000Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007AEnvironmentalOpen in IMG/M
3300012006Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101BEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300012017Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020519Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024490Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300024510Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8hEnvironmentalOpen in IMG/M
3300024539Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025115Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026902Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_14-Oct-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027621Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027746Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027754Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300028269Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8hEnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300029933Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300033978Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033995Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056EnvironmentalOpen in IMG/M
3300033996Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004EnvironmentalOpen in IMG/M
3300034023Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090EnvironmentalOpen in IMG/M
3300034063Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053EnvironmentalOpen in IMG/M
3300034064Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034096Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25909J50240_1000474193300003393Freshwater LakeMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGVGILIHSLISLTQKDTX*
JGI25909J50240_101604443300003393Freshwater LakeMKRILNYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVISLTQKDPE*
JGI25930J51415_103631523300003499Freshwater LakeMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALMLTGIGIVIHSVLSLGSKE*
Ga0049083_1012148823300005580Freshwater LenticMKHIVNYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDPE*
Ga0049081_1006077553300005581Freshwater LenticMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGVGILIHSLISLTQKDTE*
Ga0049081_1006386053300005581Freshwater LenticVDNTWTWVGTGLVLITLSGTTFRQALMLTGIGIVIHSVLSLGSKE*
Ga0049081_1007987723300005581Freshwater LenticMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVITLGTKEDQ*
Ga0049081_1010567643300005581Freshwater LenticKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLTLGSKE*
Ga0049081_1028561733300005581Freshwater LenticMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLTLGSKE*
Ga0049085_1022164823300005583Freshwater LenticMKRILTYLADNTWTWVGTGMVLITLSGPTLKQALLLSGVGILLHSVISLTQKDPE*
Ga0049082_1018911113300005584Freshwater LenticMKRILTYLADNTWTWVGTGMVLITLSGPTLKQALLLSGVGILLHSIISLT
Ga0078117_111800913300005758Lake WaterKRIITYIMENTWTWVGTGMVLITLSGPTLRQALLLTGAGILIHSLISLTQKDTE*
Ga0079957_103069493300005805LakeMKQIIAYIRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDPE*
Ga0079957_104664473300005805LakeMKKILTYLSDNTWTWAGTGLVLITLSGPTLRQALLVTGIAIVVHSVITLGQKD*
Ga0079957_113118023300005805LakeMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLGSKE*
Ga0079957_132032023300005805LakeMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSLISLTQKDTE
Ga0073926_1006954713300005943SandMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGAGILIHSLISLTQKDTE*
Ga0070744_1004678223300006484EstuarineMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALILTAIAIVIHSVITLGTKEDQ*
Ga0070749_1072343913300006802AqueousMKRFITYIMDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDTE*
Ga0075464_1055708423300006805AqueousMKHIINYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDPE*
Ga0075459_100057643300006863AqueousMKRLITYVMENTWTWVGTGMVLITLSGPTLRQAILLTGVGILIHSVISLTQKDPE*
Ga0075459_104044823300006863AqueousMKRIITYIMDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDPE*
Ga0102976_1055600123300007169Freshwater LakeMKRIITYIMENTWTWVGTGMVLITLSGPTLRQALLLTGAGILIHSLISLTQKDTE*
Ga0070753_104340143300007346AqueousMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIH
Ga0075458_1000718223300007363AqueousMDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDPE*
Ga0099851_102613733300007538AqueousMKRLITYVMENTWTWVGTGMVLITLSGPTLRQAILLTGVGILIHSVISLTQK
Ga0102872_121417433300007621EstuarineMENTWTWVGTGMVLITLSGPTLRQALLLTGVGILIHSLISLTQKDTE*
Ga0102862_105428223300007670EstuarineMKKIKDYFVDNTWTWVGTGLVLITLSGSTFRQALLLTGIGIVIHSILTLGLKE*
Ga0104986_1720293300007734FreshwaterMKKIKNYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLTLGSKE*
Ga0105745_114547923300007972Estuary WaterMKQIIAYIRDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDSE*
Ga0105745_120359723300007972Estuary WaterMKKIKNYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLGSKE*
Ga0105746_114266433300007973Estuary WaterMKKMKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLGSKE*
Ga0104242_107814913300008962FreshwaterSMKRIITYIMENTWTWVGTGMVLITLSGPTLRQAVLLTGAGILIHSLISLTQKDTE*
Ga0102860_112415723300009056EstuarineMKKMKDYFVDNTWTWVGTGLVLITLSGSTFRQALLLTGIGIVIHSILTLGLKE*
Ga0114973_10000431293300009068Freshwater LakeMKKLLDYLIDNTWTLAGTGLVLITLSGTTFKQAMLLTGIAIVIHSVLTFKAKD*
Ga0114975_1006395973300009164Freshwater LakeMKRIFTYLADNTWTWVGTGMVLITLSGPTLRQALLLTGIGVLLHSVISLTQKDPE*
Ga0114969_1002011033300009181Freshwater LakeMKRILTYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVISLTQKDTE*
Ga0116204_107070743300010293Anoxic Lake WaterMMKKLFGYIAENTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLNAKD*
Ga0116204_107122423300010293Anoxic Lake WaterMKRIIAYIADNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLLSLSQKDTE*
Ga0129333_1128303613300010354Freshwater To Marine Saline GradientMKQIIAYIRDNTWTWVGTGMVLITLSGPTLRQALFLTGIGIVLHSLISLTQKDTE*
Ga0139557_105727523300011010FreshwaterMKRILNYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVIS
Ga0151517_1528303300011113FreshwaterMKKIKDYFVDNTWTWVGTGLVLITLSGSTFRQALLLTGIGIVIHSILTLGSKE*
Ga0153800_100023233300011995FreshwaterMRKILNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAVAIHSVITLSAKDK*
Ga0119951_100059543300012000FreshwaterMKRIITYIMENTWTWVGTGMVLITLSGPTLRQAVLLTGAGILIHSLISLTQKDTE*
Ga0119951_1004539123300012000FreshwaterMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALMLTGVGIVIHSVLTLGSKE*
Ga0119955_101579673300012006FreshwaterMKRIITYIMENTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSLISLTQKDTE*
Ga0153805_1000353203300012013Surface IceMKRVITYVMENTWTWVGTGMVLITLSGPTLRQAMLLTGVGILIHSVISLTQKDTE*
Ga0153801_102156323300012017FreshwaterMKRIVTYIMDNTWTWVGTGMVLITLSGPTLRQALLLTGAGILIHSLISLTQKDTE*
Ga0164293_1014817543300013004FreshwaterMKQIINYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDTE*
(restricted) Ga0172367_10028043103300013126FreshwaterMKKIIAYIADNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLSQKDTE*
(restricted) Ga0172367_1014978943300013126FreshwaterMKRIIAYITDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLLSLSQKDTE*
(restricted) Ga0172375_1031708823300013137FreshwaterMKRIIAYIADNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLSQKDTE*
Ga0177922_1012893423300013372FreshwaterMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLSLGSKE*
Ga0177922_1048193623300013372FreshwaterMKHIINYVRDNTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSLISLTQKDPE*
Ga0177922_1080143523300013372FreshwaterMKKILDYLIDNTWTLAGTGLVLITLSGTTFKQAMLLTGVAIVIHSVLTFNAK
Ga0177922_1081185013300013372FreshwaterMKRILAYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVI
Ga0177922_1091911533300013372FreshwaterACKEDLMKKWRNYLIDNTWTWAGTGLVLITLSGTTFRQALLLTGVAIVIHSVITLGTKEDQ*
(restricted) Ga0172376_1039077423300014720FreshwaterMKRIIAYIADNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHS
Ga0181338_104314213300015050Freshwater LakeMKHIINYVRDNTWTWVGTGMVLVTLSGPTLRQALLLTGIGIVLHSLIF
Ga0181347_106202623300017722Freshwater LakeMRKILNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIAIHSVITLSAKDK
Ga0181362_102443123300017723Freshwater LakeMRKILNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAVAIHSVITLSAKDK
Ga0181362_108243023300017723Freshwater LakeMKKVLNYLAVNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVITLGTKEDQ
Ga0181365_102772243300017736Freshwater LakeMKKFVQYVADNTWTLAGTGLVLITLSGQTFKQAIILTTIAVVIHSVITLGKKEDQ
Ga0181365_105272823300017736Freshwater LakeMKKILNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVITLGTKEDQ
Ga0181356_118937913300017761Freshwater LakeMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVI
Ga0181358_125617233300017774Freshwater LakeMKRILTYLADNTWTWVGTGMVLITLSGPTLKQALLLSGVGILLHSVISLTQKDKE
Ga0181357_106689323300017777Freshwater LakeMKRIVTYIMENTWTWVGTGMVLITLSGPTLKQALLLTGVGILIHLSISLTQKDKE
Ga0181357_111603313300017777Freshwater LakeMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIH
Ga0181346_112530613300017780Freshwater LakeNYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDPE
Ga0181346_113225113300017780Freshwater LakeMKKILNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHS
Ga0169931_10043674123300017788FreshwaterMKKIIAYIADNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLSQKDTE
Ga0180437_10002021353300017963Hypersaline Lake SedimentMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLTLGSKE
Ga0181553_1069577623300018416Salt MarshMKKIKNYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLTLGSKE
Ga0181563_1030839123300018420Salt MarshMKRFITYIMDNTWTWVGTGMVLITLSGPTLRQALFLTGVGIVLHSLISLTQKDPE
Ga0181563_1073008423300018420Salt MarshMKRIITYIMENTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSLISLTQKDTE
Ga0181359_102513443300019784Freshwater LakeMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVITLGTKEDQ
Ga0181359_107601423300019784Freshwater LakeMKRILNYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVISLTQKDPE
Ga0181359_109132923300019784Freshwater LakeMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALMLTGIGIVIHSVLSLGSKE
Ga0208223_103872523300020519FreshwaterMKHIINYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDPE
Ga0222716_1038600323300021959Estuarine WaterMKRIIIYIMENTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSFISLTQKDTE
Ga0222715_1002323413300021960Estuarine WaterMKRIITYIMENTWTWVGTGMVLITLSGPTLRQALLLTGAGILIHSLISLTQKDAE
Ga0222714_1005609063300021961Estuarine WaterMKRIITYIMENTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSFISLTQKDTE
Ga0222713_1049800823300021962Estuarine WaterMKKMKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLGSKE
Ga0222712_1002117623300021963Estuarine WaterMKRIITYIMENTWTWVGTGMVLITLSGPTLRQAVLLTGAGILIHSLISLTQKDTE
Ga0222712_1039943013300021963Estuarine WaterMKRILSYLADNTWTWVGTGMVLITLSGPTLKQALLLTGIGLLLHSVIS
Ga0222712_1043818123300021963Estuarine WaterMKKWRNYLIDNTWTWAGTGLVLITLSGTTFRQALLLTGVAIVIHSVITLGTKEDQ
Ga0181354_100825123300022190Freshwater LakeMKRLITYVMENTWTWVGTGMVLITLSGPTLRQAILLTGVGILIHSVISLTQKDKE
Ga0181354_119627023300022190Freshwater LakeMKRILTYLADNTWTWVGTGMVLITLSGPTLKQALLLSGVGILLHSVISLTQKDPE
Ga0196905_100573853300022198AqueousMKRLITYVMENTWTWVGTGMVLITLSGPTLRQAILLTGVGILIHSVISLTQKDPE
Ga0181351_114215823300022407Freshwater LakeMKRIFTYLADNTWTWVGTGMVLITLSGPTLRQALLLTGIGVLLHSVISL
Ga0214917_1007215223300022752FreshwaterMKKIKNYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLGSKE
Ga0214917_1011977223300022752FreshwaterMKKLLDYLIDNTWTLAGTGLVLITLSGTTFKQAMLLTGVAIVIHSVLTFKAKD
Ga0214923_1006868883300023179FreshwaterMKRIITYIMENTWTWVGTGMVLITLSGPTLKQALLLTGVGIVLHSLISLTQKDTE
Ga0214919_10001397123300023184FreshwaterMKRILNYLAENTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVISLTQKDPE
Ga0244775_1154336713300024346EstuarineMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSILSLGSKE
Ga0255185_102888033300024490FreshwaterMKQIIAYIRDNTWTWVGTGMVLITLSGPTLRQALFLTGIGIVLHSLISLTQKDPE
Ga0255187_101560623300024510FreshwaterMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLTLGS
Ga0255231_101311843300024539FreshwaterVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGVGILIHSLISLTQKDTE
Ga0209835_116269923300025115Anoxic Lake WaterMKRIIAYIADNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLLSLSQKDTE
Ga0208147_100297013300025635AqueousMDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDPE
Ga0208795_112282723300025655AqueousMKRIITYIMDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDPE
Ga0208644_107654413300025889AqueousMKQIINYIRDNTWTWVGTGMVLITLSGPTLRQALLLTGVGIVLHSLISLTQKDPE
Ga0209851_100100023300026902SandMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGAGILIHSLISLTQKDTE
Ga0208974_101564463300027608Freshwater LenticMKRVITYVMENTWTWVGTGMVLITLSGPTLRQAMLLTGVGILIHSVISLTQKDTE
Ga0208951_118373123300027621Freshwater LenticMKHIVNYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDPE
Ga0209597_103761623300027746Freshwater LakeMKKLLDYLIDNTWTLAGTGLVLITLSGTTFKQAMLLTGIAIVIHSVLTFKAKD
Ga0209596_1016435113300027754Freshwater LakeMKRILTYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVISLTQKDTE
Ga0209088_1037909913300027763Freshwater LakeMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGVGILIHSLISLTQKDTEXTQXL
Ga0209358_1026250013300027804Freshwater LakeMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALMLTGIGIVIHSVLSL
Ga0255193_102470923300028269FreshwaterMKQIIAYIRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDTE
Ga0119944_100757823300029930AquaticMKRIITYIMENTWTWVGTGMVLITLSGPTLKQALFLTGVGVLIHSLISLTQKDTE
Ga0119945_100810323300029933AquaticMKRIVTYIMENTWTWVGTGMVLITLSGPTLKQALFLTGVGVLIHSLISLTQKDTE
Ga0315293_1090688913300031746SedimentMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQAVLLTGVGILIHSLISLTQKDTE
Ga0315278_1106841443300031997SedimentNYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGVGILLHSLISLTQKDPE
Ga0334977_0069628_1488_16553300033978FreshwaterMKRIINYIMENTWTWVGTGMVLITLSGPTLRQALFLTGVGVLIHSLISLTQKDQE
Ga0334982_0009035_1630_17913300033981FreshwaterMKKLLDYLIDNTWTLAGTGLVLITLSGTTFKQAMLLTGVAIVIHSVLTFNAKD
Ga0334982_0336566_72_2423300033981FreshwaterMMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVITLGTKEDQ
Ga0335003_0479219_7_1683300033995FreshwaterMKKILDYLIDNTWTLAGTGLVLITLSGTTFRQAMLLTGIAVVIHSVLTFNAKD
Ga0334979_0077344_856_10233300033996FreshwaterMKRILAYLADNTWTWVGTGMVLITLSGPTLRQALLLTGFGILLHSVISLTQKDSE
Ga0334979_0174924_392_5593300033996FreshwaterMKHIINYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDTE
Ga0335021_0013897_1_1353300034023FreshwaterMKRIVTYIMENTWTWVGTGMVLITLSGPTLRQALLLTGVGILIHS
Ga0335000_0012729_760_9213300034063FreshwaterMKKIKDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGIGIVIHSVLSLGSKE
Ga0335001_0185725_2_1603300034064FreshwaterMKKVLNYLADNTWTWAGTGLVLITLSGTTFKQALTLTAIAIVIHSVITLGTKE
Ga0335028_0278561_713_8743300034071FreshwaterMKKIRDYFVDNTWTWVGTGLVLITLSGTTFRQALLLTGVGIVIHSVLTLGSKE
Ga0335025_0002381_209_3763300034096FreshwaterMKQIINYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDTE
Ga0335066_0006800_5513_56803300034112FreshwaterMKRLITYVMENTWTWVGTGMVLITLSGPTLRQAMLLTGVGILIHSVISLTQKDTE
Ga0335068_0557457_1_1623300034116FreshwaterMKHIINYVRDNTWTWVGTGMVLITLSGPTLRQALLLTGIGIVLHSLISLTQKDP


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