Metagenome / Metatranscriptome Family F065770

Overview

Basic Information

• Family ID: F065770
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 127
• Average Sequence Length: 42 residues
• Representative Sequence: WRWRKYSGINKHDHHCHISFTKKGDADGSFFNIPMIGGTA
• Number of Associated Samples: 93
• Number of Associated Scaffolds: 127

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Viruses
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 99.21 %
• % of genes from short scaffolds (< 2000 bps): 87.40 %
• Associated GOLD sequencing projects: 88
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Duplodnaviria (91.339 % of family members)
• NCBI Taxonomy ID: 2731341
• Taxonomy: All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (22.835 % of family members)
• Environment Ontology (ENVO): Unclassified (58.268 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (66.929 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 8.82%
  β-sheet: 5.88%
  Coil/Unstructured: 85.29%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01391	Collagen	2.36
PF01844	HNH	1.57
PF03406	Phage_fiber_2	1.57
PF00145	DNA_methylase	0.79
PF14279	HNH_5	0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.79

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.64 %
Unclassified	root	N/A	2.36 %

Level 2

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	93.70 %
cellular organisms	root	All Organisms → cellular organisms	3.94 %
Unclassified	root	N/A	2.36 %

Level 3

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	91.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	2.36 %

Level 4

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	91.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	2.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.57 %

Level 5

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	91.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	2.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.57 %

Level 6

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	91.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	2.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.57 %

Level 7

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	90.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	2.36 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.57 %

Level 8

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	90.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.36 %
Unclassified	root	N/A	2.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.57 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300003393|JGI25909J50240_1088416	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	618
3300004123|Ga0066181_10197688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	571
3300005528|Ga0068872_10640860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	561
3300005662|Ga0078894_10889042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	773
3300006037|Ga0075465_10160480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514
3300006484|Ga0070744_10211590	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	551
3300006802|Ga0070749_10122841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1524
3300006863|Ga0075459_1016042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1234
3300006875|Ga0075473_10103222	All Organisms → cellular organisms → Bacteria	1131
3300006920|Ga0070748_1081354	All Organisms → Viruses → Predicted Viral	1251
3300006920|Ga0070748_1091696	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1164
3300006920|Ga0070748_1267104	All Organisms → cellular organisms → Bacteria	613
3300007542|Ga0099846_1036770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1877
3300008107|Ga0114340_1202942	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	663
3300008117|Ga0114351_1364101	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	640
3300008119|Ga0114354_1069649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1458
3300008266|Ga0114363_1036990	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2018
3300008266|Ga0114363_1154943	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	756
3300008266|Ga0114363_1180380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	670
3300008266|Ga0114363_1207710	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594
3300008448|Ga0114876_1129179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	956
3300008448|Ga0114876_1205278	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	660
3300008450|Ga0114880_1018302	All Organisms → Viruses → Predicted Viral	3296
3300008450|Ga0114880_1068479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1448
3300008450|Ga0114880_1104985	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1085
3300008450|Ga0114880_1133698	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	915
3300008450|Ga0114880_1182258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	723
3300008450|Ga0114880_1191768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	694
3300008450|Ga0114880_1193494	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	689
3300008450|Ga0114880_1267542	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	520
3300009068|Ga0114973_10294104	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	867
3300009081|Ga0105098_10079076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1388
3300009082|Ga0105099_10503155	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	734
3300009085|Ga0105103_10473733	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	700
3300009154|Ga0114963_10261039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	978
3300009155|Ga0114968_10082836	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1991
3300009155|Ga0114968_10445346	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	701
3300009158|Ga0114977_10072553	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2110
3300009158|Ga0114977_10167997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1299
3300009159|Ga0114978_10258935	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1078
3300009160|Ga0114981_10534164	Not Available	626
3300009163|Ga0114970_10624963	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577
3300009165|Ga0105102_10475727	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	675
3300009168|Ga0105104_10572797	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	641
3300009168|Ga0105104_10944991	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	508
3300009169|Ga0105097_10848735	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522
3300009179|Ga0115028_10625422	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	809
3300009182|Ga0114959_10636565	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	508
3300009183|Ga0114974_10603131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605
3300009183|Ga0114974_10704631	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	548
3300009184|Ga0114976_10087870	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1785
3300009184|Ga0114976_10303562	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	854
3300009184|Ga0114976_10353360	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	776
3300009184|Ga0114976_10593275	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563
3300009187|Ga0114972_10466739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	719
3300009419|Ga0114982_1223998	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	584
3300009450|Ga0127391_1118605	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500
3300010158|Ga0114960_10194413	All Organisms → cellular organisms → Bacteria	1063
3300010158|Ga0114960_10584532	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	530
3300010160|Ga0114967_10061471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2314
3300010316|Ga0136655_1109200	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	834
3300010356|Ga0116237_10960658	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	719
3300010885|Ga0133913_11478441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1722
3300010885|Ga0133913_12401408	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1289
3300010885|Ga0133913_12738013	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1191
3300012712|Ga0157598_1191267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	735
3300012734|Ga0157615_1198889	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561
3300012752|Ga0157629_1068546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634
3300012779|Ga0138284_1090197	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	816
3300013004|Ga0164293_10468983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	836
3300014711|Ga0134314_104885	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	884
3300017707|Ga0181363_1089402	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	523
3300017716|Ga0181350_1035298	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1366
3300017736|Ga0181365_1034281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1281
3300017736|Ga0181365_1174413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503
3300017754|Ga0181344_1083617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	935
3300017774|Ga0181358_1277985	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	517
3300017778|Ga0181349_1220398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	647
3300017778|Ga0181349_1305925	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514
3300017780|Ga0181346_1023984	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2553
3300017780|Ga0181346_1157153	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	846
3300017780|Ga0181346_1184546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761
3300018682|Ga0188851_1014171	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1009
3300020161|Ga0211726_10212815	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	645
3300020524|Ga0208858_1046185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	584
3300021438|Ga0213920_1080362	Not Available	635
3300021961|Ga0222714_10553367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	582
3300021962|Ga0222713_10234869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1204
3300021962|Ga0222713_10553150	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	679
3300022190|Ga0181354_1138986	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	768
3300024262|Ga0210003_1387894	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	510
3300024357|Ga0255165_1003281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3518
3300024513|Ga0255144_1074272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561
3300024562|Ga0256336_1063265	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	796
3300025445|Ga0208424_1013500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	934
3300027396|Ga0255146_1101057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592
3300027600|Ga0255117_1052382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	829
3300027644|Ga0209356_1017000	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2492
3300027707|Ga0209443_1319917	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	511
3300027733|Ga0209297_1007116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5628
3300027743|Ga0209593_10067019	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1356
3300027743|Ga0209593_10233200	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642
3300027749|Ga0209084_1009429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6021
3300027754|Ga0209596_1033585	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2863
3300027764|Ga0209134_10161396	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	772
3300027764|Ga0209134_10295293	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	551
3300027782|Ga0209500_10007851	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6731
3300027792|Ga0209287_10386420	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	538
3300027798|Ga0209353_10087372	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1413
3300027816|Ga0209990_10195115	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	941
3300027969|Ga0209191_1142878	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	982
3300028025|Ga0247723_1019440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2324
3300028025|Ga0247723_1125346	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	623
(restricted) 3300029268|Ga0247842_10565770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	570
3300031857|Ga0315909_10226516	Not Available	1457
3300031857|Ga0315909_10814279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	588
3300031951|Ga0315904_10195350	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1993
3300031951|Ga0315904_10839964	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	750
3300031963|Ga0315901_10805500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	680
3300032050|Ga0315906_10087566	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3125
3300032092|Ga0315905_10323749	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1471
3300032092|Ga0315905_11041002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684
3300032116|Ga0315903_10054543	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4046
3300033521|Ga0316616_104808960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	508
3300034061|Ga0334987_0034288	All Organisms → Viruses → Predicted Viral	4382
3300034062|Ga0334995_0071436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2731
3300034106|Ga0335036_0506341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	751

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Engineered	Engineered	0.79%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.06%
Terrestrial	Environmental → Terrestrial	3.15%
Wastewater	Engineered → Wastewater	0.79%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.46%
Marine	Environmental → Aquatic → Marine	11.81%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.36%
Unclassified	Environmental → Aquatic → Unclassified	0.79%
Soil	Environmental → Terrestrial → Soil	0.79%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.79%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	43.31%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.66%
Coastal	Environmental → Aquatic → Marine → Coastal	7.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.09%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.15%
River	Environmental → Aquatic → Freshwater → River	3.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.36%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Creek	Environmental → Aquatic → Freshwater → Creek	0.79%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.79%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.31%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	18.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.66%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.09%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.36%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.79%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.79%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.79%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	22.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	18.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.87%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.09%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.09%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.30%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.51%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.36%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.57%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.79%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.79%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.79%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.79%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.79%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.79%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.79%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental
3300004123	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)	Environmental
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental
3300010356	AD_USDEca	Engineered
3300010885	northern Canada Lakes Co-assembly	Environmental
3300012712	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES121 metaT (Metagenome Metatranscriptome)	Environmental
3300012734	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)	Environmental
3300012752	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES162 metaT (Metagenome Metatranscriptome)	Environmental
3300012779	Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300014711	Surface water microbial communities from Bangladesh - BaraHaldiaSW0111	Environmental
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental
3300020524	Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)	Environmental
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental
3300024357	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8d	Environmental
3300024513	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h	Environmental
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300025445	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)	Environmental
3300027396	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8h	Environmental
3300027600	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8h	Environmental
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental
3300029268 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19m	Environmental
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25909J50240_10884164	3300003393	Freshwater Lake	KIASPRMGWRWRKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA*
Ga0066181_101976883	3300004123	Freshwater Lake	IIFAGKIASPRMGWRWRKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA*
Ga0068872_106408601	3300005528	Freshwater Lake	GRIASSRMGWRWRKYTGSNPHNQHCHISFTKQGDTDGSFFNIPLLGGTQ*
Ga0078894_108890425	3300005662	Freshwater Lake	SFWRWRSYNGVNRHDHHIHISFTKKGDKDSSFFQIPMLGANT*
Ga0075465_101604801	3300006037	Aqueous	KKGWAWREYSGINRHDKHMHVSFTPKGDEDSSYFNIPMIGGK*
Ga0070744_102115901	3300006484	Estuarine	KAWAWRPYDGINKHNHHAHVSFTPKGDEDSSFFNIPMIGGN*
Ga0070749_101228411	3300006802	Aqueous	LNWRWRKYRGANPHRQHLHISFTKAGDKDGRFFNVPMLGGDLV*
Ga0075459_10160425	3300006863	Aqueous	VTYRGFNPHTKHCHISFTKQGDTDDSFFNIPMIGGTQ*
Ga0075473_101032221	3300006875	Aqueous	SSKKAWAWRPYDGINKHNHHCHVSFTKAGDTDGSFFNIPMLGGK*
Ga0070748_10813541	3300006920	Aqueous	RGSNPHKSHCHISFTKKGDSDDSFFNIPMIGGSV*
Ga0070748_10916965	3300006920	Aqueous	YDGINKHNHHCHVSFTKAGDTDGSFFNIPMLGGK*
Ga0070748_12671043	3300006920	Aqueous	KIASPRMGWRWRKYRGVNPHDHHCHISFTKKGDADGSVFNIPMIGGTL*
Ga0099846_10367704	3300007542	Aqueous	QGKIASRVRGWRWRPYTGASSHHQHLHISFTKAGDRDGRFFNIPLLGGDLD*
Ga0114340_12029424	3300008107	Freshwater, Plankton	RWRSYNGVNRHDHHIHISFTKKGDKDSSFFQIPMLGAN*
Ga0114351_13641014	3300008117	Freshwater, Plankton	WKKYKGINSHHAHIHISFTKEGDQNGSWFDIPMLGVNR*
Ga0114354_10696495	3300008119	Freshwater, Plankton	KAWAWRPYDGINKHNHHAHISFTIKGDEDSQFFTIPMIGGQ*
Ga0114363_10369908	3300008266	Freshwater, Plankton	SRMGWRWRKYSGSNPHNAHCHISFTKQGDQDGSFFNIPVLGGKA*
Ga0114363_11549431	3300008266	Freshwater, Plankton	AGRIASSRMGWRWRKYSGSNPHNAHCHISFTQQGDQDGSFFNIPLLGGTA*
Ga0114363_11803801	3300008266	Freshwater, Plankton	WAWRPYDGINKHNHHAHVSFTIKGDEDSTWFNIPMIGGK*
Ga0114363_12077104	3300008266	Freshwater, Plankton	YSGINPHTKHCHVSFTKKGDADGSFFNIPMIGGTA*
Ga0114876_11291791	3300008448	Freshwater Lake	RMGWRWRKYSGINPHNTHCHVSFTSKGDTDGSFFNIPMLGGTK*
Ga0114876_12052784	3300008448	Freshwater Lake	WRSYNGVNRHDHHIHISFTKKGDKDSSFFQIPMLGAN*
Ga0114880_10183021	3300008450	Freshwater Lake	AWRPYDGINKHNHHAHVSFTIKGDEDSSWFNIPMIGGK*
Ga0114880_10684791	3300008450	Freshwater Lake	KAWRWRPYDGINKHNHHAHISFTTKGDEDSTWFNIPMIGGTA*
Ga0114880_11049851	3300008450	Freshwater Lake	AWRPYDGINKHNHHAHVSFTIKGDEDSSWFNIPMIGGN*
Ga0114880_11336981	3300008450	Freshwater Lake	SPRMGWRWRKYSGSNPHNKHCHISFTTKGDTDGSFFNIPLLGGTV*
Ga0114880_11822584	3300008450	Freshwater Lake	KKAWRWRPYDGINKHNHHAHVSFTPKGDEDSTWFNIPMIGGN*
Ga0114880_11917681	3300008450	Freshwater Lake	AWRWRPYDGINKHNHHAHISFTTKGDEDSTWFNIPMIGGN*
Ga0114880_11934941	3300008450	Freshwater Lake	RWRPYDGINKHNHHAHISFTTKGDEDSTWFNIPMIGGTA*
Ga0114880_12675421	3300008450	Freshwater Lake	RWRTYTGINKHRHHLHVSFSIKGDQDGSFFQIPLLGASK*
Ga0114973_102941041	3300009068	Freshwater Lake	KAWAWRPYDGINKHNHHAHISFTIKGDEDNSWFNIPMIGGK*
Ga0105098_100790765	3300009081	Freshwater Sediment	YRGINPHNTHCHVSFTKKGDADGSFFNIPMIGGTV*
Ga0105099_105031551	3300009082	Freshwater Sediment	EGRIASSRMGWRWRKYSGSNPHSKHCHVSFTKQGDADGSFFNIPLLGGN*
Ga0105103_104737331	3300009085	Freshwater Sediment	RKYKGSNPHIAHCHISFTKAGDNDGSFFNIPLLGGTA*
Ga0114963_102610395	3300009154	Freshwater Lake	AWAWRPYDGANKHNHHCHISFTQAGDTDGSFFNIPMIGGKA*
Ga0114968_100828366	3300009155	Freshwater Lake	YDGINRHDHHIHISFTKEGDQNGRWFDIPMLGANK*
Ga0114968_104453461	3300009155	Freshwater Lake	PYSGINKHNHHCHISFTKKGDADGSFFNVPMIGGTA*
Ga0114977_100725531	3300009158	Freshwater Lake	YKGANKHNHHCHISFKKEADNDGSFFQIPMLGGTHDSGN*
Ga0114977_101679975	3300009158	Freshwater Lake	DGINQHNHHIHISFTKEGDSNGRWFEIPMLGATNENN*
Ga0114978_102589355	3300009159	Freshwater Lake	KYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA*
Ga0114981_105341641	3300009160	Freshwater Lake	GINAHTHHIHVSFAKTADEDSSFFNIPMVGGING*
Ga0114970_106249634	3300009163	Freshwater Lake	RNYSGFSRHDHHIHISFTKEGDENGSWFDIPMLGANNERP*
Ga0105102_104757271	3300009165	Freshwater Sediment	SSRMGWRWRKYSGINPHIKHCHISFTKKGDTDSSFFNIPMIGGTV*
Ga0105104_105727974	3300009168	Freshwater Sediment	SRMGWRWRKYSGSNPHRAHCHVSFTRKGDKDGSFFQIPLLGADK*
Ga0105104_109449911	3300009168	Freshwater Sediment	IFEGRIASSRMGWRWRKYSGSNPHNKHCHISFTTKGDTDSSFFNIPMLGAE*
Ga0105097_108487352	3300009169	Freshwater Sediment	GWRWRKYSGINPHNAHCHVSFTKAGDKDGSFFNIPLLGGE*
Ga0115028_106254225	3300009179	Wetland	IAYVIFDGRIASPRLGWRWRVYRGSNPHRAHCHISFTKAGDNDGSFFNIPLLGGTQ*
Ga0114959_106365654	3300009182	Freshwater Lake	PYDGVNKHNHHCHVSFTKAGDNDSSFFNIPMIGGTV*
Ga0114974_106031314	3300009183	Freshwater Lake	RWKPYSGINKHDHHCHISFTSKGDKDGSFFNIPLLGATK*
Ga0114974_107046311	3300009183	Freshwater Lake	WRWRTYTGINQHRHHCHISFTIKGDEDGSFFNIPLLGANK*
Ga0114976_100878701	3300009184	Freshwater Lake	WRPYDGINKHNHHCHISFTKEADEASDFFQIPLIGGTK*
Ga0114976_103035623	3300009184	Freshwater Lake	SSKKAWAWRPYDGINKHNHHAHISFTIKGDEDNSWFNIPMIGGN*
Ga0114976_103533601	3300009184	Freshwater Lake	TGINKHDHHCHISFTVKGDEDGSFFNIPLLGATK*
Ga0114976_105932753	3300009184	Freshwater Lake	KSWSWRTYDGINRHDHHIHISFTKEGDQNGRWFDIPMLGAKHE*
Ga0114972_104667394	3300009187	Freshwater Lake	SRLGWRWRKYSGINKHDHHCHISFTKKGDADGSFFNIPMLGGTA*
Ga0114982_12239981	3300009419	Deep Subsurface	LWRWRTYSGINRHDAHIHISFTKKGDKDSSFFQIPMLGANT*
Ga0127391_11186053	3300009450	Meromictic Pond	GRIASSRMGWRWRKYRGINPHNTHLHVSFSPKGDTDGSFFFIQ*
Ga0114960_101944131	3300010158	Freshwater Lake	WAWRPYDGINKHNHHCHISFTQAGDNDSSFFNIPMLGGK*
Ga0114960_105845323	3300010158	Freshwater Lake	PYDGINKHNHHCHISFTQAGDNDSSFFNIPMLGGK*
Ga0114967_100614716	3300010160	Freshwater Lake	LGWKWRKYTGINKHNHHCHISFTKEADLNSEFLQIPMIGGSSNG*
Ga0136655_11092001	3300010316	Freshwater To Marine Saline Gradient	RPYSGINSHHAHIHISFTKKGDENGSWFEIPMLGAGNENN*
Ga0116237_109606582	3300010356	Anaerobic Digestor Sludge	RKAWRWRPYDGINKHRHHAHVSFTTKGDEDSKWFNIPMIGGN*
Ga0133913_114784416	3300010885	Freshwater Lake	YNGFNKHNHHCHISFTKEGDSNNSFFNIPMIGGK*
Ga0133913_124014085	3300010885	Freshwater Lake	RTYTGINKHNHHCHISFTKKGDADGSFFNVPMIGGTA*
Ga0133913_127380131	3300010885	Freshwater Lake	KIASSKKAWAWRPYDGINKHNHHAHFSFTIKGDEDSNFFNIPMIGGQ*
Ga0157598_11912671	3300012712	Freshwater	RIASSRMGWRWRKYKGSNPHNKHCHISFTTKGDTDSSFFNIPMLGAE*
Ga0157615_11988891	3300012734	Freshwater	RMGWRWRKYKGSNPHNKHCHISFHPAGDVDSSFFNIPMLGAE*
Ga0157629_10685464	3300012752	Freshwater	WRWRKYKGSNPHNKHCHISFHPAGDVDSSFFNIPMLGAE*
Ga0138284_10901971	3300012779	Freshwater Lake	WRWRKYSGINKHDHHCHISFTKKGDADGSFFNIPMIGGTA*
Ga0164293_104689831	3300013004	Freshwater	WRWRKYSGINPHDHHCHISFSKKGDADGSFFNIPMIGGTA*
Ga0134314_1048851	3300014711	Surface Water	AFRPYQGLNPHNHHCHVSFTKEGDTDGSPFQIPMLKEI*
Ga0181363_10894023	3300017707	Freshwater Lake	RIASSKKNWSWRIYSGFSRHDHHIHISFSKEGDQNGSWFDIPMLGVNK
Ga0181350_10352981	3300017716	Freshwater Lake	KAWAWRPYDGINKHNHHAHVSFTIKGDEDSSFFNIPMIGGN
Ga0181365_10342814	3300017736	Freshwater Lake	KYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA
Ga0181365_11744131	3300017736	Freshwater Lake	IPYKGINKHAHHAHISFTRKGDEDGSFFNIPLLGATK
Ga0181344_10836175	3300017754	Freshwater Lake	AWAWRPYDGINKHNHHAHFSFTIKGDEDSSFFNIPMIGGN
Ga0181358_12779853	3300017774	Freshwater Lake	WRKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTT
Ga0181349_12203981	3300017778	Freshwater Lake	IASAKKAWAWRSYDGINKHNHHAHVSFTIKGDEDSSWFNIPMIGGK
Ga0181349_13059253	3300017778	Freshwater Lake	AWAWRPYDGINKHNHHAHISFTIKGDEDSQFFTIPMIGGQ
Ga0181346_10239848	3300017780	Freshwater Lake	VTYKGINSHHAHIHISFTKEGDQNGSWFDIPMLGATNE
Ga0181346_11571533	3300017780	Freshwater Lake	GKIASSKKAWAWRPYDGINKHNHHAHFSFTTKGDEDNSWFNIPMIGGK
Ga0181346_11845461	3300017780	Freshwater Lake	KIASPRMGWRWRKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA
Ga0188851_10141714	3300018682	Freshwater Lake	YIIFAGRIASSRMGWRWRKYRGVNPHDKHCHISFTKKGDSDDSFFSNIPMIGGSV
Ga0211726_102128151	3300020161	Freshwater	ILNWRWRKYKGINPHKKHLHCSFTKAGDLDGSPFNIPLIGGKI
Ga0208858_10461853	3300020524	Freshwater	KWKWRKYTGINKHNHHCHISFTKEADLNGEFLQIPMIGESQ
Ga0213920_10803624	3300021438	Freshwater	KKSWAWRPYDGINKHNHHCHISFTKVGDNDSSFFNIPMIGGKP
Ga0222714_105533671	3300021961	Estuarine Water	GKIASPRMGWRWRKYRGINPHDHHCHISFTKQGDTDSSFFNIPMIGGTV
Ga0222713_102348691	3300021962	Estuarine Water	WRKYTGINKHEHHIHISFAKTEDLNSEFFNIPMIGGTDA
Ga0222713_105531501	3300021962	Estuarine Water	KSFWRWRSYNGINRHDHHIHISFTKKGDKDSSFFQIPMLGANT
Ga0181354_11389861	3300022190	Freshwater Lake	RWRKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA
Ga0210003_13878943	3300024262	Deep Subsurface	IFQGKIASPRMGWRWRKYRGSNPHNMHCHISFTKAGDKDGSFFNIPLLGGTNDKDKR
Ga0255165_10032811	3300024357	Freshwater	AWRPYDGLNRHVKHLHCSFTKKGDQDGSFFNIPMIGGSI
Ga0255144_10742721	3300024513	Freshwater	RPYDGLNRHTKHCHISFTKKGDHDGSFFNIPMIGGSV
Ga0256336_10632651	3300024562	Freshwater	KKNWAWRPYDGVNRHVKHLHCSFTKKGDQDGSFFNIPMIGGSV
Ga0208424_10135005	3300025445	Aqueous	YSGSNPHKHHCHISFTPKGDTDGSFFNIPMLGGTK
Ga0255146_11010571	3300027396	Freshwater	NWAWRPYDGLNRHVKHLHCSFTKKGDQDGSFFNIPMIGGSI
Ga0255117_10523821	3300027600	Freshwater	RKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA
Ga0209356_10170001	3300027644	Freshwater Lake	KKAWAWRPYDGINKHNHHAHVSFTIKGDEDSQFFTIPMIGGK
Ga0209443_13199173	3300027707	Freshwater Lake	AKKAWAWRSYDGINKHNHHAHVSFTIKGDEDSQFFTIPMIGGK
Ga0209297_10071161	3300027733	Freshwater Lake	WKPYSGINKHDHHCHISFTSKGDEDGAFFNIPLLGASK
Ga0209593_100670191	3300027743	Freshwater Sediment	IFEGRIASPRMGWRWRKYSGSNPHNAHCHVSFTKQGDKDGSFFNIPLLGGE
Ga0209593_102332001	3300027743	Freshwater Sediment	IASSRMGWRWRKYSGSNPHRAHCHVSFTRKGDKDGSFFQIPLLGADK
Ga0209084_10094291	3300027749	Freshwater Lake	WAWRPYDGINKHNHHCHISFTQAGDNDSSFFNIPMLGGK
Ga0209596_10335851	3300027754	Freshwater Lake	KYTGINAHTHHIHVSFAKTADEDSSFFNIPMVGGTNG
Ga0209134_101613961	3300027764	Freshwater Lake	KIASSKKAWAWRTYDGINKHNHHAHFSFTIKGDSDSTFFNIPMIGGK
Ga0209134_102952931	3300027764	Freshwater Lake	KYTGSNPHNHHCHISFTSKGDQDGSFFQIPLLGATK
Ga0209500_1000785116	3300027782	Freshwater Lake	LWRWVAYRGINPHIKHCHISFTKKGDADGSFFNIPMIGGTA
Ga0209287_103864203	3300027792	Freshwater Sediment	YIIFAGKIASPRMGWRWRKYSGINPHDKHCHISFTKQGDSDDSFFNIPMIGGTL
Ga0209353_100873724	3300027798	Freshwater Lake	IIFQGKIASPRMGWRWRKYSGINPHTKHCHISFTKKGDADGSFFNIPMIGGTA
Ga0209990_101951151	3300027816	Freshwater Lake	SPRKAWRWRPYDGINQHRHHAHVSFTTKGDEDFTWFNIPMIGGN
Ga0209191_11428781	3300027969	Freshwater Lake	WAWRPYDGVNKHNHHCHVSFTKAGDTDSSFFNIPMIGGTQ
Ga0247723_10194401	3300028025	Deep Subsurface Sediment	KSFWRWRSYNGVNRHDHHIHISFTKKGDKDSSFFQIPMLGANT
Ga0247723_11253461	3300028025	Deep Subsurface Sediment	VRIASARLGFRWRKYTGSNPHHAHCHISFTKKGDADGSFFNIPMIGGTQ
(restricted) Ga0247842_105657701	3300029268	Freshwater	ASPRKAWRWRSYDGINQHRAHAHFSFTIKGDEDRSFFDIPMIGGQ
Ga0315909_102265164	3300031857	Freshwater	IASSKKAWAWRPYDGINQHRAHAHFSFTIKGDEDRSFFDVPMIGGK
Ga0315909_108142791	3300031857	Freshwater	WRKFSGSNPHNKHCHISFTTKGDSDGSFFNIPLLGGTV
Ga0315904_101953506	3300031951	Freshwater	WRKYRGANPHRQHLHISFTKAGDKDGRFFNVPMLGGDLV
Ga0315904_108399641	3300031951	Freshwater	RWRKYSGSNPHNKHCHISFTTKGDTDGSFFNIPLLGGTV
Ga0315901_108055001	3300031963	Freshwater	RKYTGSNPHDKHCHISFTSKGDQDGSFFNIPLLGGK
Ga0315906_100875661	3300032050	Freshwater	FSGSNPHNKHCHISFTTKGDSDGSFFNIPLLGGTV
Ga0315905_103237496	3300032092	Freshwater	KAWAWRPYDGINKHNHHAHISFTIKGDEDSQFFTIPMIGGQ
Ga0315905_110410021	3300032092	Freshwater	KAWAWRPYDGINKHNHHAHISFTIKGDEDNSWFNIPMIGGN
Ga0315903_100545431	3300032116	Freshwater	KSFWRWRSYNGVNRHDHHIHISFTKKGDKDSSFFQIPMLGAN
Ga0316616_1048089603	3300033521	Soil	AKSFWRWRSYSGVNRHDHHIHISFTKKGDSDSSFFQIPMLGAN
Ga0334987_0034288_4226_4354	3300034061	Freshwater	MGWRWRKYSGINPHDHHCHISFTKKGDADGSFFNIPMIGGTA
Ga0334995_0071436_2_130	3300034062	Freshwater	MGWRWRKYSGINPHDHHCHISFTKKGDADGSFFNIPMIGGTV
Ga0335036_0506341_2_133	3300034106	Freshwater	KKSWRWRPYDGINRHDHHIHISFTKEGDQNGSWFDIPMLGADK