Metagenome / Metatranscriptome Family F065709

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	53 residues
Representative Sequence	YDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL
Number of Associated Samples	100
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.57 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	92.91 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.205 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (20.472 % of family members)
Environment Ontology (ENVO)	Unclassified (61.417 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01966	HD	14.17
PF01661	Macro	3.94
PF09643	YopX	2.36
PF00149	Metallophos	1.57
PF07963	N_methyl	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	3.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
All Organisms	root	All Organisms	37.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
cellular organisms	root	All Organisms → cellular organisms	25.20 %
Viruses	superkingdom	All Organisms → Viruses	12.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.05 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.15 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	7.87 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	2.36 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	7.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.36 %
Candidatus Korarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota	0.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	7.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.36 %
Candidatus Korarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	0.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	11.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	7.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.36 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.79 %
Candidatus Korarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	11.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Candidatus Parcubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria	7.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.36 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.79 %
Candidatus Korarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	11.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
unclassified Parcubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria	7.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.36 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.79 %
Candidatus Korarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.20 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	11.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.02 %
Candidatus Parcubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	7.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2.36 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.79 %
Candidatus Korarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001844\|RCM35_1111387	Not Available	657	Open in IMG/M
3300001968\|GOS2236_1062671	Not Available	2735	Open in IMG/M
3300002277\|B570J29592_101700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1035	Open in IMG/M
3300002476\|metazooDRAFT_10794870	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	585	Open in IMG/M
3300003277\|JGI25908J49247_10093516	Not Available	729	Open in IMG/M
3300003394\|JGI25907J50239_1049023	Not Available	863	Open in IMG/M
3300005517\|Ga0070374_10605236	Not Available	544	Open in IMG/M
3300005580\|Ga0049083_10204860	Not Available	669	Open in IMG/M
3300005582\|Ga0049080_10239853	Not Available	593	Open in IMG/M
3300005585\|Ga0049084_10159458	Not Available	784	Open in IMG/M
3300005662\|Ga0078894_11361176	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005662\|Ga0078894_11399182	Not Available	584	Open in IMG/M
3300006641\|Ga0075471_10143931	All Organisms → Viruses → Predicted Viral	1263	Open in IMG/M
3300006917\|Ga0075472_10086363	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1517	Open in IMG/M
3300007624\|Ga0102878_1188066	Not Available	593	Open in IMG/M
3300007670\|Ga0102862_1026711	All Organisms → Viruses → Predicted Viral	1355	Open in IMG/M
3300007973\|Ga0105746_1204486	Not Available	675	Open in IMG/M
3300007973\|Ga0105746_1254956	Not Available	605	Open in IMG/M
3300007992\|Ga0105748_10059398	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300007992\|Ga0105748_10558574	Not Available	503	Open in IMG/M
3300008107\|Ga0114340_1227386	Not Available	592	Open in IMG/M
3300008108\|Ga0114341_10487523	Not Available	561	Open in IMG/M
3300008110\|Ga0114343_1126908	Not Available	847	Open in IMG/M
3300008110\|Ga0114343_1136068	Not Available	803	Open in IMG/M
3300008113\|Ga0114346_1071459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1663	Open in IMG/M
3300008113\|Ga0114346_1160365	Not Available	948	Open in IMG/M
3300008113\|Ga0114346_1266772	Not Available	621	Open in IMG/M
3300008114\|Ga0114347_1183015	Not Available	717	Open in IMG/M
3300008117\|Ga0114351_1234988	Not Available	924	Open in IMG/M
3300008120\|Ga0114355_1062863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1617	Open in IMG/M
3300008120\|Ga0114355_1240166	Not Available	541	Open in IMG/M
3300008259\|Ga0114841_1086220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1406	Open in IMG/M
3300008262\|Ga0114337_1125510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1152	Open in IMG/M
3300008262\|Ga0114337_1131973	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1111	Open in IMG/M
3300008267\|Ga0114364_1134049	Not Available	713	Open in IMG/M
3300008448\|Ga0114876_1154122	Not Available	834	Open in IMG/M
3300009068\|Ga0114973_10381531	Not Available	740	Open in IMG/M
3300009152\|Ga0114980_10211717	All Organisms → Viruses → Predicted Viral	1138	Open in IMG/M
3300009155\|Ga0114968_10359492	Not Available	802	Open in IMG/M
3300009155\|Ga0114968_10536679	Not Available	625	Open in IMG/M
3300009163\|Ga0114970_10530835	Not Available	639	Open in IMG/M
3300009185\|Ga0114971_10723256	Not Available	543	Open in IMG/M
3300010354\|Ga0129333_10455749	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300010370\|Ga0129336_10529715	Not Available	633	Open in IMG/M
3300013372\|Ga0177922_10469865	Not Available	517	Open in IMG/M
3300013372\|Ga0177922_10740801	Not Available	571	Open in IMG/M
3300013372\|Ga0177922_10809309	Not Available	557	Open in IMG/M
3300013372\|Ga0177922_11098184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1310	Open in IMG/M
3300013372\|Ga0177922_11262684	Not Available	600	Open in IMG/M
3300014962\|Ga0134315_1011527	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1399	Open in IMG/M
3300017723\|Ga0181362_1054266	Not Available	830	Open in IMG/M
3300017747\|Ga0181352_1183282	Not Available	543	Open in IMG/M
3300017754\|Ga0181344_1181933	Not Available	593	Open in IMG/M
3300017761\|Ga0181356_1209432	Not Available	573	Open in IMG/M
3300017766\|Ga0181343_1048458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1254	Open in IMG/M
3300017766\|Ga0181343_1171342	Not Available	600	Open in IMG/M
3300017774\|Ga0181358_1150930	Not Available	793	Open in IMG/M
3300017778\|Ga0181349_1272139	Not Available	558	Open in IMG/M
3300017778\|Ga0181349_1276963	Not Available	551	Open in IMG/M
3300017780\|Ga0181346_1179817	Not Available	775	Open in IMG/M
3300017780\|Ga0181346_1268086	Not Available	590	Open in IMG/M
3300019784\|Ga0181359_1148914	Not Available	805	Open in IMG/M
3300020161\|Ga0211726_10259546	Not Available	895	Open in IMG/M
3300020172\|Ga0211729_11172350	Not Available	859	Open in IMG/M
3300020205\|Ga0211731_11135937	Not Available	586	Open in IMG/M
3300020549\|Ga0207942_1037784	Not Available	601	Open in IMG/M
3300020550\|Ga0208600_1009713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1552	Open in IMG/M
3300021962\|Ga0222713_10213402	All Organisms → Viruses → Predicted Viral	1282	Open in IMG/M
3300022407\|Ga0181351_1124606	Not Available	961	Open in IMG/M
3300022407\|Ga0181351_1180024	Not Available	728	Open in IMG/M
3300023179\|Ga0214923_10107503	All Organisms → Viruses → Predicted Viral	1860	Open in IMG/M
3300023179\|Ga0214923_10328483	Not Available	817	Open in IMG/M
3300023184\|Ga0214919_10269787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1201	Open in IMG/M
3300024567\|Ga0256307_1080213	Not Available	765	Open in IMG/M
3300025732\|Ga0208784_1006262	Not Available	4236	Open in IMG/M
3300025872\|Ga0208783_10122665	Not Available	1122	Open in IMG/M
3300025872\|Ga0208783_10223524	Not Available	771	Open in IMG/M
3300027211\|Ga0208307_1043174	Not Available	692	Open in IMG/M
3300027213\|Ga0208555_1016876	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1153	Open in IMG/M
3300027213\|Ga0208555_1032746	Not Available	817	Open in IMG/M
3300027578\|Ga0255075_1095072	Not Available	513	Open in IMG/M
3300027608\|Ga0208974_1089721	Not Available	831	Open in IMG/M
3300027627\|Ga0208942_1173770	Not Available	567	Open in IMG/M
3300027659\|Ga0208975_1067070	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300027736\|Ga0209190_1119746	All Organisms → Viruses → Predicted Viral	1184	Open in IMG/M
3300027746\|Ga0209597_1044926	All Organisms → Viruses → Predicted Viral	2224	Open in IMG/M
3300027754\|Ga0209596_1025447	All Organisms → Viruses → Predicted Viral	3446	Open in IMG/M
3300027763\|Ga0209088_10160771	Not Available	986	Open in IMG/M
3300027769\|Ga0209770_10403661	Not Available	505	Open in IMG/M
3300027772\|Ga0209768_10400650	Not Available	546	Open in IMG/M
3300027785\|Ga0209246_10305537	Not Available	610	Open in IMG/M
3300027793\|Ga0209972_10497885	Not Available	501	Open in IMG/M
3300027804\|Ga0209358_10103835	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1574	Open in IMG/M
3300027816\|Ga0209990_10014679	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4632	Open in IMG/M
3300027816\|Ga0209990_10308367	Not Available	707	Open in IMG/M
3300027971\|Ga0209401_1184469	Not Available	790	Open in IMG/M
3300027971\|Ga0209401_1344114	Not Available	505	Open in IMG/M
3300028108\|Ga0256305_1016111	All Organisms → Viruses → Predicted Viral	1868	Open in IMG/M
3300028394\|Ga0304730_1215740	Not Available	715	Open in IMG/M
3300031784\|Ga0315899_10446331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1249	Open in IMG/M
3300031784\|Ga0315899_10721475	All Organisms → Viruses	923	Open in IMG/M
3300031784\|Ga0315899_11143904	Not Available	679	Open in IMG/M
3300031787\|Ga0315900_10263140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1462	Open in IMG/M
3300031834\|Ga0315290_10087438	All Organisms → Viruses → Predicted Viral	2606	Open in IMG/M
3300031857\|Ga0315909_10025631	Not Available	5826	Open in IMG/M
3300031857\|Ga0315909_10258683	All Organisms → Viruses → Predicted Viral	1330	Open in IMG/M
3300031963\|Ga0315901_10248562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1505	Open in IMG/M
3300032050\|Ga0315906_10400458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1195	Open in IMG/M
3300032116\|Ga0315903_10257141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1504	Open in IMG/M
3300032516\|Ga0315273_13014355	Not Available	527	Open in IMG/M
3300033557\|Ga0316617_100309039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1343	Open in IMG/M
3300033981\|Ga0334982_0183662	Not Available	1043	Open in IMG/M
3300033995\|Ga0335003_0006063	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	6170	Open in IMG/M
3300034061\|Ga0334987_0098237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	2259	Open in IMG/M
3300034061\|Ga0334987_0133196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1849	Open in IMG/M
3300034062\|Ga0334995_0279043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1107	Open in IMG/M
3300034064\|Ga0335001_0471390	Not Available	668	Open in IMG/M
3300034092\|Ga0335010_0297548	Not Available	927	Open in IMG/M
3300034103\|Ga0335030_0249304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1212	Open in IMG/M
3300034104\|Ga0335031_0199977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1353	Open in IMG/M
3300034104\|Ga0335031_0855922	Not Available	502	Open in IMG/M
3300034109\|Ga0335051_0381592	Not Available	670	Open in IMG/M
3300034112\|Ga0335066_0144140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	1459	Open in IMG/M
3300034119\|Ga0335054_0103814	All Organisms → Viruses → Predicted Viral	1750	Open in IMG/M
3300034279\|Ga0335052_0163851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1302	Open in IMG/M
3300034283\|Ga0335007_0133053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1799	Open in IMG/M
3300034284\|Ga0335013_0629596	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.21%
Terrestrial	Environmental → Terrestrial	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.04%
Marine	Environmental → Aquatic → Marine	14.17%
Soil	Environmental → Terrestrial → Soil	0.79%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	45.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.35%
Coastal	Environmental → Aquatic → Marine → Coastal	8.66%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.09%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.72%
River	Environmental → Aquatic → Freshwater → River	2.36%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	44.09%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	25.20%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.66%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.09%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.15%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.94%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	20.47%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	11.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	10.24%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	7.09%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.30%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.72%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.15%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.94%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.36%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.57%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.57%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.79%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.79%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.79%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.79%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001844	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM35, ROCA_DNA220_0.2um_bLM_C_3a	Environmental	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300002277	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002476	Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014962	Surface water microbial communities from Bangladesh - BaraHaldiaSW0309	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024567	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027213	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 (SPAdes)	Environmental	Open in IMG/M
3300027578	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028108	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM35_11113871	3300001844	Marine Plankton	MGQLNKYDSSIPIEYNLEGYLVVGIEVNKSVIVNRTKRNGVEKLGMFQTSRVTEVGENYFKTRNSVYGYKYL*
GOS2236_10626712	3300001968	Marine	LRSKVIISRTKRNGEDADGFFISSLVTEIGNNYFKTENSVYSYKFL*
B570J29592_1017003	3300002277	Freshwater	DGQYQGDSHSIPVEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL*
metazooDRAFT_107948701	3300002476	Lake	IVDRTKRNGEVVRGLFSTSRVTEVGDNYFKTKNSVYLYRFI*
JGI25908J49247_100935163	3300003277	Freshwater Lake	EYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL*
JGI25907J50239_10490231	3300003394	Freshwater Lake	PIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL*
Ga0070374_106052363	3300005517	Freshwater Lake	YEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL*
Ga0049083_102048601	3300005580	Freshwater Lentic	HIMGEPPTDNYNSIPIEYNLEGYLLYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL*
Ga0049080_102398533	3300005582	Freshwater Lentic	YDIEVGKPVVVGRTKRNGVEAYGVFTTSRVTEVGDNYFKTQNSVYSYKFL*
Ga0049084_101594581	3300005585	Freshwater Lentic	VLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSRVTEVGDKYFKTQNSVYSYKFL*
Ga0078894_113611763	3300005662	Freshwater Lake	GVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL*
Ga0078894_113991821	3300005662	Freshwater Lake	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNKYFKTQNSVYSYKFL*
Ga0075471_101439311	3300006641	Aqueous	VVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL*
Ga0075472_100863631	3300006917	Aqueous	SVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTRNSVYLYKFL*
Ga0102878_11880663	3300007624	Estuarine	GYLMYEIEVGKSVFVDRTKRNGEEVCGLFTTSRVTEVGSNYFKTQNSVYSYKLL*
Ga0102862_10267115	3300007670	Estuarine	YDIEVGKPVVVGRTKRNGVEAYGVFTTSRVTEVGDKYFKTQNSVYSYKFL*
Ga0105746_12044863	3300007973	Estuary Water	VLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGDNYFKTKNSVYSYKFL*
Ga0105746_12549561	3300007973	Estuary Water	NLEGSLIYDIEVGKNVIVDRTKRNGEEVCGLFTTSRVTEVGSNYFKTQNSVYSYKLL*
Ga0105748_100593983	3300007992	Estuary Water	IPVEYNLEGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL*
Ga0105748_105585743	3300007992	Estuary Water	LIYDIEVGKNVIVDRTKRNGEEVCGLFTTSRVTEVGSNYFKTQNSVYSYKLL*
Ga0114340_12273861	3300008107	Freshwater, Plankton	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL*
Ga0114341_104875231	3300008108	Freshwater, Plankton	QVGESVTVQRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL*
Ga0114343_11269081	3300008110	Freshwater, Plankton	YDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL*
Ga0114343_11360681	3300008110	Freshwater, Plankton	EYNLEGVLSYDIEVGKPVVVGRTKRNGVEAYGMFNTSTVTEVGNNYFKTKNSVYSYKFL*
Ga0114346_10714593	3300008113	Freshwater, Plankton	NLEGILSFPIQVGEGVVVQRTKRNGVEAYGIFSTSRVTEVGDSYFKTKNSLYLYKFL*
Ga0114346_11603654	3300008113	Freshwater, Plankton	YSSIPIEYNLEGYLLYEIEVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYSYKFL*
Ga0114346_12667721	3300008113	Freshwater, Plankton	YSSIPIEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL*
Ga0114347_11830151	3300008114	Freshwater, Plankton	LLYEIEVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDTYFKTQNSVYSYKFL*
Ga0114351_12349882	3300008117	Freshwater, Plankton	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL*
Ga0114355_10628634	3300008120	Freshwater, Plankton	LSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL*
Ga0114355_12401661	3300008120	Freshwater, Plankton	LSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYSYKFL*
Ga0114841_10862203	3300008259	Freshwater, Plankton	YSSIPIEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL*
Ga0114337_11255101	3300008262	Freshwater, Plankton	GKPVVVGRTKRNGVEAYGMFNTSTVTEVGNNYFKTKNSLYSYRFL*
Ga0114337_11319731	3300008262	Freshwater, Plankton	GKPVVVGRTKRNGVEAYGMFNTSTVTEVGNNYFKTKNSVYSYKFL*
Ga0114364_11340491	3300008267	Freshwater, Plankton	IPVEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGMFSTSRVTEVGDNYFKTKNSVYSYKFL*
Ga0114876_11541224	3300008448	Freshwater Lake	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTQNSVYSYKFL*
Ga0114973_103815311	3300009068	Freshwater Lake	PVVVGRTKRNGVEAYGVFTTSRVTEVGDKYFKTRNSVYSYKLL*
Ga0114980_102117171	3300009152	Freshwater Lake	SIPIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL*
Ga0114968_103594921	3300009155	Freshwater Lake	LEGYLMYEIEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFI*
Ga0114968_105366793	3300009155	Freshwater Lake	NYNSIPIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL*
Ga0114970_105308353	3300009163	Freshwater Lake	HIMGEPPTDNYNSIPIEYNLEGYLMYEIAVGKSVFVDRIKRNGVEVRGVFTTSRVTEVGDNYFKTQNSVYSYKFL*
Ga0114971_107232563	3300009185	Freshwater Lake	FVDRTKRNGVEVRGVFTTSRVTEVGDNYFKTQNSVYSYKFL*
Ga0129333_104557491	3300010354	Freshwater To Marine Saline Gradient	IEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL*
Ga0129336_105297151	3300010370	Freshwater To Marine Saline Gradient	IQVGESVIVQRTKRNGVEAYGMFSTSRVTEVGDKYFKTKNSVYSYKFL*
Ga0177922_104698651	3300013372	Freshwater	TKRNGVEAYGVFTTSRVTEVGDKYFKTQNSVYSYKFL*
Ga0177922_107408011	3300013372	Freshwater	GRTKRNGVEAYGVFTTSRVTEVGDNYFKTQNSVYSYKFL*
Ga0177922_108093091	3300013372	Freshwater	GVLSYDIEVGKPVVVGRTKRNGVEAYGVFTTSRVTEVGDNYFKTKNSVYSYKFL*
Ga0177922_110981843	3300013372	Freshwater	RNGVEAYGVFTTSRVTEVGDKYFKTQNSVYSYKYLCL*
Ga0177922_112626843	3300013372	Freshwater	RNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKFL*
Ga0134315_10115271	3300014962	Surface Water	YSSIPIEYNVEGYLLYDIEVGKNVFIDRIKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYSYKFL*
Ga0181362_10542664	3300017723	Freshwater Lake	NLEGYLLYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKFL
Ga0181352_11832821	3300017747	Freshwater Lake	PVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTMNSVYSYKFL
Ga0181344_11819333	3300017754	Freshwater Lake	DIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNKYFKTKNSVYSYKFL
Ga0181356_12094321	3300017761	Freshwater Lake	KPNDNYSSIPIEYNLEGVLSYDIEVGKPVVVGRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL
Ga0181343_10484583	3300017766	Freshwater Lake	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNKYFKTKNSLYLYKYLS
Ga0181343_11713423	3300017766	Freshwater Lake	EGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0181358_11509301	3300017774	Freshwater Lake	MDEHIDGQYQGDSHSIPVEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0181349_12721392	3300017778	Freshwater Lake	YNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTKNSVYSYKFL
Ga0181349_12769631	3300017778	Freshwater Lake	KSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL
Ga0181346_11798174	3300017780	Freshwater Lake	IPIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL
Ga0181346_12680863	3300017780	Freshwater Lake	IPIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGVFTTSRVTEVGDNYFKTQNSVYSYKFL
Ga0181359_11489144	3300019784	Freshwater Lake	SYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0211726_102595461	3300020161	Freshwater	IYDIEVGKNVIVERTKRNGEEVCGMFTTSRVTEVGNNYFKTQNSVYSYKFL
Ga0211729_111723504	3300020172	Freshwater	FIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYKYSFL
Ga0211731_111359373	3300020205	Freshwater	EVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYSYKFL
Ga0207942_10377841	3300020549	Freshwater	VVVGRTKRNGVEAYGMFSTSTVTEVGDKYFKTRNSLYLYKFL
Ga0208600_10097135	3300020550	Freshwater	VLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGDKYFKTRNSLYLYKFL
Ga0222713_102134021	3300021962	Estuarine Water	SHSIPIEYNLEGVLSYDIEVGKPVVVGRTKRNGVDAYGMFTTSRVTEVGDNYFKTKNSVYSYKFL
Ga0181351_11246064	3300022407	Freshwater Lake	QYQGDSHSIPVEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0181351_11800241	3300022407	Freshwater Lake	YEIEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL
Ga0214923_101075035	3300023179	Freshwater	TKRNGVEVRGVFTTSRVTEVGDNYFKTRNSLYLYKYLSL
Ga0214923_103284831	3300023179	Freshwater	GRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL
Ga0214919_102697871	3300023184	Freshwater	GKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0256307_10802134	3300024567	Freshwater	LSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNKYFKTKNSLYLYKFL
Ga0208784_100626214	3300025732	Aqueous	YNLEGNLMSDIEIGENVFVERFMRNGVEAHGMFATSRVTEVGKNYFKTQNSVYRYKFIN
Ga0208783_101226651	3300025872	Aqueous	GNLMSDIEIGENVFVERFMRNGVEAHGMFATSRVTEVGKNYFKTQNSVYRYKFIN
Ga0208783_102235243	3300025872	Aqueous	VVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTMNSVYSYKFL
Ga0208307_10431741	3300027211	Estuarine	EVGKPVVVGRTKRNGVEAYGVFTTSRVTEVGDKYFKTQNSVYSYKFL
Ga0208555_10168764	3300027213	Estuarine	EVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGDNYFKTKNSVYSYKFL
Ga0208555_10327461	3300027213	Estuarine	VVGRTKRNGVEAYGVFSTSTVTEVGDKYFKTQNSVYSYKFL
Ga0255075_10950723	3300027578	Freshwater	IMGEPPTDNYNSIPIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL
Ga0208974_10897211	3300027608	Freshwater Lentic	YNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFTTSRVTEVGDKYFKTQNSVYSYKFL
Ga0208942_11737703	3300027627	Freshwater Lentic	RNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKLL
Ga0208975_10670701	3300027659	Freshwater Lentic	VGRTKRNGVEAYGVFTTSRVTEVGDNYFKTKNSVYSYKFL
Ga0209190_11197461	3300027736	Freshwater Lake	KSVFVDRIKRNGVEVRGVFTTSNVTEIGDNYFKTQNSVYSYKLL
Ga0209597_10449261	3300027746	Freshwater Lake	TKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL
Ga0209596_10254471	3300027754	Freshwater Lake	NYNSIPIEYNLEGYLMYEIEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL
Ga0209088_101607711	3300027763	Freshwater Lake	KRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL
Ga0209770_104036612	3300027769	Freshwater Lake	SYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNKYFKTKNSVYSYKFL
Ga0209768_104006503	3300027772	Freshwater Lake	SVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL
Ga0209246_103055373	3300027785	Freshwater Lake	IEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKFL
Ga0209972_104978851	3300027793	Freshwater Lake	EIEVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYQYKFL
Ga0209358_101038355	3300027804	Freshwater Lake	VVGRTKRNGVEAYGAFSTSTVTEVGNNYFKTMNSVYSYKFL
Ga0209990_100146791	3300027816	Freshwater Lake	LYEIEVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYSYKFL
Ga0209990_103083671	3300027816	Freshwater Lake	LYEIEVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYQYKFL
Ga0209401_11844691	3300027971	Freshwater Lake	LSYDIEVGKPVVVGRTKRNGVEAYGVFTTSRVTEVGDKYFKTRNSVYSYKLL
Ga0209401_13441141	3300027971	Freshwater Lake	NSIPIEYNLEGYLMYEIEVGKSVFVDRIKRNGVEVRGVFTTSNVTEIGDNYFKTQNSVYSYKLL
Ga0256305_10161116	3300028108	Freshwater	SIPIEYNLEGYLLYEIEVGKNVFIDRTKRNGVEVRGVFTTSRVTEVGDKYFKTQNSVYSYKFL
Ga0304730_12157401	3300028394	Freshwater Lake	EGYLMYEIEVGKSVFVDRTKRNGVEVRGMFTTSRVTEVGDNYFKTQNSVYSYKLL
Ga0315899_104463311	3300031784	Freshwater	VLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL
Ga0315899_107214751	3300031784	Freshwater	GVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0315899_111439043	3300031784	Freshwater	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTQNSVYSYKFL
Ga0315900_102631403	3300031787	Freshwater	YNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL
Ga0315290_100874388	3300031834	Sediment	KNVIVDRTKRNGEEVCGLFTTSRVTEIGDNYFKTRNSVYSYKFL
Ga0315909_100256311	3300031857	Freshwater	EYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0315909_102586834	3300031857	Freshwater	SSIPIEYNLEGVLSYDIEVGKPVVVGRTKRNGVEAYGMFNTSTVTEVGNNYFKTKNSVYSYKFL
Ga0315901_102485621	3300031963	Freshwater	LEGELSYDIEVGKSVVVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL
Ga0315906_104004583	3300032050	Freshwater	GRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL
Ga0315903_102571413	3300032116	Freshwater	VVGRTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYLYKYLSL
Ga0315273_130143553	3300032516	Sediment	RTKRNGEEVCGLFTTSRVTEIGDNYFKTRNSVYSYKFL
Ga0316617_1003090391	3300033557	Soil	GTLAFPIQVGESVIVERTKRNGVEAYGVFSTSRVTEVGNNYFKTMNSVYSYKFL
Ga0334982_0183662_41_211	3300033981	Freshwater	LEGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0335003_0006063_44_199	3300033995	Freshwater	MYEIEVGKSVFVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKLL
Ga0334987_0098237_2_214	3300034061	Freshwater	QYQGDSHSIPVEYNLEGILSFPIQVGESVIVQRTKRNGVEAYGMFSTSRVTEVGNNYFKTKNSVYSYKFI
Ga0334987_0133196_1_147	3300034061	Freshwater	VGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYLYKYLSL
Ga0334995_0279043_957_1106	3300034062	Freshwater	EVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYLYKYLSL
Ga0335001_0471390_556_666	3300034064	Freshwater	KRNGVDAYGVFSTSTVTEVGNNYFKTQNSVYSYKFL
Ga0335010_0297548_19_252	3300034092	Freshwater	MEEHIDGQYQGDSHSIPVEYNLEGVLSYDIEVGKSVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0335030_0249304_3_128	3300034103	Freshwater	GRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYLYKYLSL
Ga0335031_0199977_1092_1331	3300034104	Freshwater	MDEHIDGQYQGDSHSIPVEYNLEGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYLYKYLSL
Ga0335031_0855922_291_500	3300034104	Freshwater	YQGDSHSIPVEYNLEGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0335051_0381592_3_152	3300034109	Freshwater	DIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0335066_0144140_1325_1459	3300034112	Freshwater	KPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYSYKFL
Ga0335054_0103814_1623_1748	3300034119	Freshwater	FVDRTKRNGVEVRGVFTTSNVTEIGDNYFKTRNSVYSYKFL
Ga0335052_0163851_1093_1269	3300034279	Freshwater	LEGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYLYKYLSL
Ga0335007_0133053_3_176	3300034283	Freshwater	EGVLSYDIEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNNYFKTKNSVYLYKYLSL
Ga0335013_0629596_476_622	3300034284	Freshwater	IEVGKPVVVGRTKRNGVEAYGVFSTSTVTEVGNKYFKTQNSVYSYRFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences