Metagenome Family F065662

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065662
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	68 residues
Representative Sequence	MAISNELSSDVAVAILAQNKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQN
Number of Associated Samples	90
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.20 %
% of genes near scaffold ends (potentially truncated)	26.77 %
% of genes from short scaffolds (< 2000 bps)	83.46 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.591 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (10.236 % of family members)
Environment Ontology (ENVO)	Unclassified (48.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.228 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.54% β-sheet: 0.00% Coil/Unstructured: 38.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13620	CarboxypepD_reg	9.45
PF07681	DoxX	4.72
PF13380	CoA_binding_2	1.57
PF00486	Trans_reg_C	0.79
PF00291	PALP	0.79
PF00994	MoCF_biosynth	0.79
PF00300	His_Phos_1	0.79
PF10946	DUF2625	0.79
PF07589	PEP-CTERM	0.79
PF04185	Phosphoesterase	0.79
PF00578	AhpC-TSA	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	4.72
COG4270	Uncharacterized membrane protein	Function unknown [S]	4.72
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.59 %
Unclassified	root	N/A	24.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.59 %
Unclassified	root	N/A	24.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.59 %
Unclassified	root	N/A	24.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.99 %
Unclassified	root	N/A	24.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.41 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	13.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.41 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	12.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.41 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	12.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.41 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	12.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.41 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	12.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.30 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_12402806	Not Available	1159	Open in IMG/M
3300002568\|C688J35102_119318604	Not Available	673	Open in IMG/M
3300003319\|soilL2_10037114	All Organisms → cellular organisms → Bacteria → Acidobacteria	1647	Open in IMG/M
3300004081\|Ga0063454_102080206	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300004114\|Ga0062593_100298415	All Organisms → cellular organisms → Bacteria → Acidobacteria	1371	Open in IMG/M
3300004114\|Ga0062593_101737132	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300004156\|Ga0062589_100920454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	807	Open in IMG/M
3300004156\|Ga0062589_102884513	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300004157\|Ga0062590_101192126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300004480\|Ga0062592_102373543	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005290\|Ga0065712_10069794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6683	Open in IMG/M
3300005290\|Ga0065712_10087644	All Organisms → cellular organisms → Bacteria	2564	Open in IMG/M
3300005290\|Ga0065712_10274943	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300005293\|Ga0065715_10496905	Not Available	759	Open in IMG/M
3300005294\|Ga0065705_10118689	All Organisms → cellular organisms → Bacteria → Acidobacteria	3170	Open in IMG/M
3300005294\|Ga0065705_10241399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300005295\|Ga0065707_10329916	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300005331\|Ga0070670_100761651	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300005331\|Ga0070670_101098537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	725	Open in IMG/M
3300005331\|Ga0070670_101514237	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300005332\|Ga0066388_100248249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2418	Open in IMG/M
3300005334\|Ga0068869_101245522	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005334\|Ga0068869_101395193	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005338\|Ga0068868_101531181	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300005340\|Ga0070689_100177345	All Organisms → cellular organisms → Bacteria → Acidobacteria	1729	Open in IMG/M
3300005341\|Ga0070691_10468396	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300005343\|Ga0070687_100070203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1878	Open in IMG/M
3300005345\|Ga0070692_10172202	Not Available	1249	Open in IMG/M
3300005345\|Ga0070692_10275979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300005345\|Ga0070692_11427584	Not Available	501	Open in IMG/M
3300005353\|Ga0070669_100028927	All Organisms → cellular organisms → Bacteria → Acidobacteria	3993	Open in IMG/M
3300005365\|Ga0070688_100429833	Not Available	983	Open in IMG/M
3300005438\|Ga0070701_10054165	All Organisms → cellular organisms → Bacteria → Acidobacteria	2091	Open in IMG/M
3300005438\|Ga0070701_11212261	Not Available	536	Open in IMG/M
3300005441\|Ga0070700_100587472	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300005444\|Ga0070694_101079230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	669	Open in IMG/M
3300005530\|Ga0070679_101898463	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005547\|Ga0070693_100526351	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005547\|Ga0070693_101137821	Not Available	597	Open in IMG/M
3300005549\|Ga0070704_100108947	All Organisms → cellular organisms → Bacteria → Acidobacteria	2104	Open in IMG/M
3300005563\|Ga0068855_100933256	Not Available	915	Open in IMG/M
3300005577\|Ga0068857_100292589	All Organisms → cellular organisms → Bacteria → Acidobacteria	1500	Open in IMG/M
3300005577\|Ga0068857_100871080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300005577\|Ga0068857_100930570	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300005577\|Ga0068857_101472543	Not Available	663	Open in IMG/M
3300005578\|Ga0068854_100239254	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300005615\|Ga0070702_100881189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300005615\|Ga0070702_101853606	Not Available	505	Open in IMG/M
3300005616\|Ga0068852_100901565	All Organisms → cellular organisms → Bacteria → Acidobacteria	901	Open in IMG/M
3300005718\|Ga0068866_10271374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1047	Open in IMG/M
3300005842\|Ga0068858_100340647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1435	Open in IMG/M
3300005843\|Ga0068860_100665501	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300006049\|Ga0075417_10647765	Not Available	540	Open in IMG/M
3300006755\|Ga0079222_10017991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2767	Open in IMG/M
3300006755\|Ga0079222_10025606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2443	Open in IMG/M
3300006755\|Ga0079222_10106842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1487	Open in IMG/M
3300006931\|Ga0097620_103135655	Not Available	504	Open in IMG/M
3300006954\|Ga0079219_10111484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1370	Open in IMG/M
3300006954\|Ga0079219_10597088	Not Available	807	Open in IMG/M
3300009036\|Ga0105244_10473363	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300009093\|Ga0105240_12132157	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300009101\|Ga0105247_11506963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	549	Open in IMG/M
3300009162\|Ga0075423_11750883	Not Available	670	Open in IMG/M
3300009174\|Ga0105241_11870201	Not Available	588	Open in IMG/M
3300009177\|Ga0105248_11913544	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300009545\|Ga0105237_12424722	Not Available	535	Open in IMG/M
3300009551\|Ga0105238_11744056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300010042\|Ga0126314_11146844	Not Available	580	Open in IMG/M
3300010047\|Ga0126382_10131204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1682	Open in IMG/M
3300010358\|Ga0126370_12353527	Not Available	528	Open in IMG/M
3300010359\|Ga0126376_10017528	All Organisms → cellular organisms → Bacteria	4611	Open in IMG/M
3300010360\|Ga0126372_10104088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2144	Open in IMG/M
3300010371\|Ga0134125_12087470	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300010371\|Ga0134125_12691542	Not Available	541	Open in IMG/M
3300010373\|Ga0134128_10075471	All Organisms → cellular organisms → Bacteria → Acidobacteria	3856	Open in IMG/M
3300010373\|Ga0134128_12994508	Not Available	520	Open in IMG/M
3300010397\|Ga0134124_10061732	All Organisms → cellular organisms → Bacteria → Acidobacteria	3173	Open in IMG/M
3300010397\|Ga0134124_10768534	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300010399\|Ga0134127_10617558	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300010399\|Ga0134127_10768413	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300010401\|Ga0134121_10002128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	17527	Open in IMG/M
3300010401\|Ga0134121_11330772	Not Available	725	Open in IMG/M
3300011119\|Ga0105246_12141149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012948\|Ga0126375_10831772	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300013296\|Ga0157374_10879389	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300014325\|Ga0163163_10301954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1653	Open in IMG/M
3300014325\|Ga0163163_10699594	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1077	Open in IMG/M
3300014326\|Ga0157380_10403434	All Organisms → cellular organisms → Bacteria → Acidobacteria	1298	Open in IMG/M
3300015371\|Ga0132258_10142832	All Organisms → cellular organisms → Bacteria	5731	Open in IMG/M
3300015371\|Ga0132258_12537430	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300018476\|Ga0190274_10325389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300025315\|Ga0207697_10226763	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300025899\|Ga0207642_10400368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	821	Open in IMG/M
3300025900\|Ga0207710_10000281	All Organisms → cellular organisms → Bacteria	41434	Open in IMG/M
3300025900\|Ga0207710_10029871	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300025911\|Ga0207654_11238769	Not Available	544	Open in IMG/M
3300025911\|Ga0207654_11251614	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300025917\|Ga0207660_11338470	Not Available	581	Open in IMG/M
3300025918\|Ga0207662_10274457	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300025918\|Ga0207662_10314776	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300025919\|Ga0207657_10882529	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300025921\|Ga0207652_11518641	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300025923\|Ga0207681_10026742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	3725	Open in IMG/M
3300025924\|Ga0207694_10481815	All Organisms → cellular organisms → Bacteria → Acidobacteria	1038	Open in IMG/M
3300025925\|Ga0207650_11303272	Not Available	618	Open in IMG/M
3300025925\|Ga0207650_11614817	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300025927\|Ga0207687_11747177	Not Available	533	Open in IMG/M
3300025935\|Ga0207709_10121319	All Organisms → cellular organisms → Bacteria → Acidobacteria	1765	Open in IMG/M
3300025940\|Ga0207691_11191805	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300025941\|Ga0207711_10428503	Not Available	1231	Open in IMG/M
3300025942\|Ga0207689_10111558	All Organisms → cellular organisms → Bacteria → Acidobacteria	2248	Open in IMG/M
3300025942\|Ga0207689_10478648	Not Available	1042	Open in IMG/M
3300025942\|Ga0207689_10621133	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300025942\|Ga0207689_11294182	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300025960\|Ga0207651_10251536	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300025981\|Ga0207640_10220462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1452	Open in IMG/M
3300025981\|Ga0207640_10270312	All Organisms → cellular organisms → Bacteria → Acidobacteria	1329	Open in IMG/M
3300026041\|Ga0207639_10846739	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300026078\|Ga0207702_12205105	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300026095\|Ga0207676_10416609	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300026116\|Ga0207674_10207542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1908	Open in IMG/M
3300026116\|Ga0207674_11492323	Not Available	645	Open in IMG/M
3300027787\|Ga0209074_10061093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1180	Open in IMG/M
3300028381\|Ga0268264_10241090	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300028381\|Ga0268264_10310209	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.54%
Environmental	Environmental	46.46%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.54%
Terrestrial	Environmental → Terrestrial	46.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	28.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.62%
Roots	Host-Associated → Plants → Roots	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	23.62%
Loam	Environmental → Terrestrial → Soil → Loam	18.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.57%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	23.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	8.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.36%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.79%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_124028062	3300000953	Soil	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSDETRSGRLKKSSPKANAKATK*
C688J35102_1193186041	3300002568	Soil	MAISNELSSDVAVAILAQNKTPQELEQLKDVILQVHSALQKMSEETRSERLKRKPQEAQKAQN*
soilL2_100371142	3300003319	Sugarcane Root And Bulk Soil	MAISNELSSDVAVAILANEKSPQELKKLKDIILEVHSALQKMSEETRTDRSRRDHKKAPKLDS*
Ga0063454_1020802062	3300004081	Soil	RTNYDGGSSEIPTHQRTMAISNELSSDVAVAILAQNKTPQELEQLKDVILQVHSALQKMSEETRSERLKRKPQEAQKAQN*
Ga0062593_1002984152	3300004114	Soil	MANLQKLHLERFWFYLNMAISNELSSDVAVAILAEKKSPQELKKLKDIILEVHSALQKMSEETRTYRFKRKKAQEGTRGTNA*
Ga0062593_1017371321	3300004114	Soil	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSAETRADRLKKIPPKSVAKGTK*
Ga0062589_1009204541	3300004156	Soil	MAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRESQKAQTAQN*
Ga0062589_1028845131	3300004156	Soil	MAISNELSSDVAVALLAQNKSPQELQELKDIILQVHSALQKMSEETRSDRLKRMPQKEPKAQN*
Ga0062590_1011921261	3300004157	Soil	MAALQKYSSTQRTMAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKSQKAQTAQN*
Ga0062592_1023735432	3300004480	Soil	ISNELSSDVAVAILAKKKSPQELRQLKDIILEVHSALQQMSEETRAYRFKAKLKKAAPDRPGPI*
Ga0065712_100697944	3300005290	Miscanthus Rhizosphere	MAALPKLSRAYFYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG*
Ga0065712_100876442	3300005290	Miscanthus Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRMKKTPPKTEAKGTK*
Ga0065712_102749432	3300005290	Miscanthus Rhizosphere	MATLQKSSKTMAISNELSSDVAVAILAQNKSPQELEQLKDIILQVHSALQKMSEETRSDRLKRMPQKAPKAQN*
Ga0065715_104969051	3300005293	Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQ
Ga0065705_101186892	3300005294	Switchgrass Rhizosphere	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSAETRADRLKKSPPKSNAKGTK*
Ga0065705_102413992	3300005294	Switchgrass Rhizosphere	MAISNELSSDVAVAILAKKKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRAATTKQKNS*
Ga0065707_103299162	3300005295	Switchgrass Rhizosphere	MATLQKLSRAKFYRTQNMAISNELSSDVAVAILAKKKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRAATTKQKNS*
Ga0070670_1007616511	3300005331	Switchgrass Rhizosphere	MAALQKIPRADRLEPINMAISNELSSDVAVAILAKQKSPQELQQLKDVILQVHSALQKMSEETRSDRLSRSSHKKGKESSK*
Ga0070670_1010985372	3300005331	Switchgrass Rhizosphere	MAALQKYPAHSETMAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQQMSEEVRSDRLKRKPPKAQKAQN*
Ga0070670_1015142372	3300005331	Switchgrass Rhizosphere	MAISNELSSDVAVAILAQNKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQN*
Ga0066388_1002482493	3300005332	Tropical Forest Soil	MAISNELSSDVAVAILAQNKSPQELKQLKDIILQVHSALQEMSEETRTDRLKKNEPPKSTKTANGL*
Ga0068869_1012455222	3300005334	Miscanthus Rhizosphere	AAAILAQNKSPQELEQLKDIVLQVHSTLQKMSEETRSDRLKKKPQPRPKES*
Ga0068869_1013951932	3300005334	Miscanthus Rhizosphere	MAISNELSSDVAAAILAKKKSPRELQQLKDVILQVHTVLQEMSQETRSDRLKRKPQKAQKAKN*
Ga0068868_1015311811	3300005338	Miscanthus Rhizosphere	NELSSDVAVAILAQNKSPQELEQLKDIILQVHSALQKMSEETRSDRLKRMPQKAPKAQN*
Ga0070689_1001773452	3300005340	Switchgrass Rhizosphere	MAALPKLSRAYFYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNEG*
Ga0070691_104683962	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLKRAATTKQKNS*
Ga0070687_1000702031	3300005343	Switchgrass Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRIKKTPPKSEAKGTK*
Ga0070692_101722022	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRLKKIPPKSVAKGTK*
Ga0070692_102759791	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG*
Ga0070692_114275842	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEEARSDRLKKMPQKAQKTQN*
Ga0070669_1000289272	3300005353	Switchgrass Rhizosphere	MATLQKIPRADSFEPINMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLLRSSHKKAQNAQNDS*
Ga0070688_1004298332	3300005365	Switchgrass Rhizosphere	MAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSIHKKAQKAQNDG*
Ga0070701_100541652	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNEG*
Ga0070701_112122611	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSAETRADRMKKTPPKTEAKGTK*
Ga0070700_1005874721	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAALQKYPEQIHLEPINMAISNELSSDVAVAILAKKNSPQELQQLKDIILQVHSELQKMSEETRSDRLKRTALTKPKNS*
Ga0070694_1010792301	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKPQKAQKAQN*
Ga0070679_1018984632	3300005530	Corn Rhizosphere	LSRAYFYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG*
Ga0070693_1005263511	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	WRLFRNTPAHSETMAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKPQKAQKAQN*
Ga0070693_1011378212	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRMKKTPPKTEAKGTK*
Ga0070704_1001089474	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLKRADTARQKNS*
Ga0068855_1009332562	3300005563	Corn Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLRDIILQVHSALQEMSAETRADRMKKTPPKTEAKGTK*
Ga0068857_1002925892	3300005577	Corn Rhizosphere	MAISNELSSDVAVALLAKEKSPQELKQLKDIILQVHSALQEMSDETRSGRLKKSSPKANAKATK*
Ga0068857_1008710802	3300005577	Corn Rhizosphere	MAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKSQKAQTAQN*
Ga0068857_1009305701	3300005577	Corn Rhizosphere	EQTTMAALQKYPAHSETMAISNELSSDVAVAILSKKKSPPEAEQLKDVILQVHTTLQQMSEEVRSDRLKRKPQKAHKAQN*
Ga0068857_1014725431	3300005577	Corn Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKKKPKQEPKES*
Ga0068854_1002392541	3300005578	Corn Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLLRSSHKKAQNAQNGS*
Ga0070702_1008811891	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKPQKAQKAQN*
Ga0070702_1018536062	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MATLQKSSKTMAISNELSSDVAVAILAQNKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAKN*
Ga0068852_1009015652	3300005616	Corn Rhizosphere	FYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNEG*
Ga0068866_102713741	3300005718	Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKAVILQVHSTLQKMSEETRSDRLKRADTT
Ga0068858_1003406472	3300005842	Switchgrass Rhizosphere	MAISNELSSDVAAAILAKKKSSQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN*
Ga0068860_1006655011	3300005843	Switchgrass Rhizosphere	MVALHTLETMAISNELSSDVAVAILAKNKSPQELEQLKDIILEVHSALQKMSEEARDDRLKKGTTKGTEVID*
Ga0075417_106477651	3300006049	Populus Rhizosphere	MAISNELSSDVAVAILAKEKSPQELKKLKEIILEVHSALQEMSEETRAERLKTKLNSKKRSEPN*
Ga0079222_100179914	3300006755	Agricultural Soil	MAISNELSSDVAVAILAQKKSPQELKQLKDIILQVHSALQKMSEEVRSERLKKMPQKVQKAQN*
Ga0079222_100256062	3300006755	Agricultural Soil	MAISNELSSEVAVAILAQNKSPQELQQLKDVILQVHSALQKMSEETRSDRARRKPPKAQKAQN*
Ga0079222_101068422	3300006755	Agricultural Soil	MAISNELSSDGAAAILAKKKSPQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN*
Ga0097620_1031356552	3300006931	Switchgrass Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQN*
Ga0079219_101114842	3300006954	Agricultural Soil	MAISNELSSDVAAAILAKKKSPQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQRAKN*
Ga0079219_105970882	3300006954	Agricultural Soil	MAISNELSSDVAVAILAQKKSPQELKQLKDIILQVHSALQKMSEEVRSERLKKMPQKA
Ga0105244_104733631	3300009036	Miscanthus Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQN
Ga0105240_121321572	3300009093	Corn Rhizosphere	MAISNELSSDVAAAILAKKKSPRELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN*
Ga0105247_115069632	3300009101	Switchgrass Rhizosphere	MAISNELSSDVAAAILAKKKSSQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQK
Ga0075423_117508831	3300009162	Populus Rhizosphere	MAISNELSSDVAVALLAKDKSPQELKQLKDIILLVHSALQEMSAETRPDQIKKTPPKSEAKGTK*
Ga0105241_118702012	3300009174	Corn Rhizosphere	MVALHTLETMAISNELSSDVAVAILAKNKSPQELEQLKDIILEVHSALQKMSEEARDDRLKKG
Ga0105248_119135441	3300009177	Switchgrass Rhizosphere	IAVTPANYDGDSSKNIPANSIEPINMAISNELSSDVAVAILAKKKSPEELQQLKDVILEVHSALQKMSEETRSDRLSRSSHKKAQKAQNDL*
Ga0105237_124247222	3300009545	Corn Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQ
Ga0105238_117440561	3300009551	Corn Rhizosphere	RNTPAHSETMAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKSQKAQTAQN*
Ga0126314_111468441	3300010042	Serpentine Soil	MAAFQKYPGTSSNMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQQMSEEARSDRLKRKPQKAQKAQN*
Ga0126382_101312043	3300010047	Tropical Forest Soil	MAISNELSSDVAVAILAKKKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRADTTKPKNS*
Ga0126370_123535271	3300010358	Tropical Forest Soil	MAISNELSSDVAVAILAQNKSPQEVKQLKDIILQVHSALQEMSEETRTDRLKKNEPPKSTKTANGL*
Ga0126376_100175282	3300010359	Tropical Forest Soil	MAISNELSSDVAVAILAKNKSPQELKQLKDIILQVHSTLQEMSEETRTDRLKKNEPPKSTKTANGL*
Ga0126372_101040882	3300010360	Tropical Forest Soil	MAISNELSSDVAVAILAQNKSPKEREELKNIILQVHSTLQEMSEETRTDRLKRKPQKSTKQQ*
Ga0134125_120874701	3300010371	Terrestrial Soil	NTNKLRWRLFRNIPTHRQTMAISNELSSDVAVAILAQTKTPQELEQLKDIILQVHSALQKMSEEARSERLKKMPQKAQKAQN*
Ga0134125_126915421	3300010371	Terrestrial Soil	MATLQKITPANSIEPINMAISNELSSDVAVAIMAKQKSPQELEQLKDVILQVHSTLQKMSEETRSDRLKRADTTKQKNS*
Ga0134128_100754712	3300010373	Terrestrial Soil	MATLQKIPRADSVEPINMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLLRSSHKKAQNAQNGS*
Ga0134128_129945081	3300010373	Terrestrial Soil	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKTQKAQN*
Ga0134124_100617322	3300010397	Terrestrial Soil	MAISNELSSDVAAAILAKKKSPQELRQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN*
Ga0134124_107685342	3300010397	Terrestrial Soil	MATLQKIPRADSFEPINMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLKRAATTKQKNS*
Ga0134124_109753712	3300010397	Terrestrial Soil	MAALQKYPEQITLQPINMAISNELSSDVAVAILAKQKSPQELQQLKDVILQVHSALQKMSEETRSDRLSRSSHKKAKKAQNDL*
Ga0134127_106175582	3300010399	Terrestrial Soil	MAISNELSSDVAAAILAKKKSPQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN*
Ga0134127_107684132	3300010399	Terrestrial Soil	MATLQKIPRADSVEPINMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLKKAATTKQKNS*
Ga0134121_100021288	3300010401	Terrestrial Soil	MAISNELSSDVAVAILAKKKSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG*
Ga0134121_113307722	3300010401	Terrestrial Soil	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKRTKEQ*
Ga0105246_121411491	3300011119	Miscanthus Rhizosphere	LSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKSQKAQTAQN*
Ga0126375_108317721	3300012948	Tropical Forest Soil	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSEETRPDRLKKNLPQKSTKATKA*
Ga0157374_108793892	3300013296	Miscanthus Rhizosphere	LSSDVAVAILAQNKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQN*
Ga0163163_103019542	3300014325	Switchgrass Rhizosphere	MAALQKIPRADRLEPINMAISNELSSDVAVAILAKQKSPQELQQLKDVILQVHSALQKMSEETRSDRLSRSSHKKAKKAQNDL*
Ga0163163_106995942	3300014325	Switchgrass Rhizosphere	MAALQKYPAHSETMAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKSQKAQTAQ
Ga0157380_104034342	3300014326	Switchgrass Rhizosphere	MAISNELSSDVAVAILANQKSPQELKQLKDIILQVHSALQKMSEETRADRRQRSKPQAGGTEDGLNAA*
Ga0132258_101428322	3300015371	Arabidopsis Rhizosphere	MAISNELSSDVAVALLAKNKSPQELKQLKDIILQVHSALQEMSAETRPDRLKKSPPRKDTKNTK*
Ga0132258_125374301	3300015371	Arabidopsis Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRLKRTPPKSEAKNTK*
Ga0190274_103253892	3300018476	Soil	MAISNELSSAVAAAILAQNKSPQELEQLKDIVLQVHSTLQKMSEETRSDRLKKKPQPGPKES
Ga0207697_102267632	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	FEPINMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLKRAATTKQKNS
Ga0207642_104003682	3300025899	Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKAVILQVHSTLQKMSEETRSDRLKRADTTKQKNS
Ga0207710_100002815	3300025900	Switchgrass Rhizosphere	MAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNEG
Ga0207710_100298712	3300025900	Switchgrass Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLRDIILQVHSALQEMSAETRADRMKKTPPKTEAKGTK
Ga0207654_112387691	3300025911	Corn Rhizosphere	MAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKSQKAQTAQN
Ga0207654_112516142	3300025911	Corn Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRMKKTPPKTEAKGTK
Ga0207660_113384701	3300025917	Corn Rhizosphere	MAISNELSSDVAVAILAQTKTPQELEQLKDVILQVHSALQQMSEETRSDRLKRKPQKAQKAPN
Ga0207662_102744572	3300025918	Switchgrass Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKMSEETRSDRLKRMPQKAPKAQN
Ga0207662_103147761	3300025918	Switchgrass Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRIKKTPPKSEAKGTK
Ga0207657_108825292	3300025919	Corn Rhizosphere	MAISNELSSDVAVAILAQNKSPQELQQLKDIILQVHSALQKMSEETRSDRLKRKPQKAQKAQN
Ga0207652_115186411	3300025921	Corn Rhizosphere	LSRAYFYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG
Ga0207681_100267421	3300025923	Switchgrass Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLLRSS
Ga0207694_104818152	3300025924	Corn Rhizosphere	MATLQKSSKTMAISNELSSDVAVAILAQNKSPQELEQLKDIILQVHSALQKMSEETRSDRLKRMPQKEPKAQN
Ga0207650_113032722	3300025925	Switchgrass Rhizosphere	MAALQKYPAHSETMAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQQMSEEVRSDRLKRKPPKAQKAQN
Ga0207650_116148172	3300025925	Switchgrass Rhizosphere	MAALQKIPRADRLEPINMAISNELSSDVAVAILAKQKSPQELQQLKDVILQVHSALQKMSEETRSDRLSRSSHKKGKESSK
Ga0207687_117471772	3300025927	Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLLRSSHKKAQNAQNDS
Ga0207709_101213192	3300025935	Miscanthus Rhizosphere	MVALHTLETMAISNELSSDVAVAILAKNKSPQELEQLKDIILEVHSALQKMSEEARDDRLKKGTTKGTEVID
Ga0207691_111918051	3300025940	Miscanthus Rhizosphere	YDGGSSEIIPSIFYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG
Ga0207711_104285031	3300025941	Switchgrass Rhizosphere	MAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG
Ga0207689_101115581	3300025942	Miscanthus Rhizosphere	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSAETRADRLKKIPPKSVAKGTK
Ga0207689_104786482	3300025942	Miscanthus Rhizosphere	MAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLERAATTKQKNS
Ga0207689_106211332	3300025942	Miscanthus Rhizosphere	MAISNELSSDVAVAILAKQKSAQEMKQLKDIILQVHTALQKISEETRADRRDRSRLQQRTKDPTG
Ga0207689_112941822	3300025942	Miscanthus Rhizosphere	MAISNELSSDVAVAILAQNKTPQELQQLKDIILQVHSALQKVSEETRSDRLKRKPQKAQKAKN
Ga0207651_102515361	3300025960	Switchgrass Rhizosphere	DVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG
Ga0207640_102204622	3300025981	Corn Rhizosphere	MAISNELSSDVAVAILSKKKSPQEAEQLKDVILQVHSTLQKMSEEVRSDRLKRKPQKAQKAQN
Ga0207640_102703121	3300025981	Corn Rhizosphere	SFEPINMAISNELSSDVAVAILAKKKSPQELEQLKDVILQVHSTLQKMSEETRSDRLLRSSHKKAQNAQNGS
Ga0207703_106079862	3300026035	Switchgrass Rhizosphere	MAALPKLSRASFYRAQNMAISNELSSDVAVAILAKKSSPQELQQLKEVILQVHSALQKMSEETRSDRLSRSSHKKAQKAQNDG
Ga0207639_108467391	3300026041	Corn Rhizosphere	MAISNELSSDVAAAILAKKKSPQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN
Ga0207702_122051051	3300026078	Corn Rhizosphere	RVTRTNYDDDSSEIIETMAISNELSSDVAAAILAKKKSPQELQQLKDVILQVHTVLQEMSEETRSDRLKRKPQKAQKAKN
Ga0207676_104166092	3300026095	Switchgrass Rhizosphere	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSAETRADRLKKIPPESVAKGTK
Ga0207674_102075423	3300026116	Corn Rhizosphere	MAALQKYPAHSETMAISNELSSDVAVAILSKKKSPPEAEQLKDVILQVHTTLQQMSEEVRSDRLKRKPQKAHKAQN
Ga0207674_114923232	3300026116	Corn Rhizosphere	MAISNELSSDVAVALLAKEKSPQELKQLKDIILQVHSALQEMSDETRSGRLKKSSPKANAKATK
Ga0209074_100610932	3300027787	Agricultural Soil	MAISNELSSEVAVAILAQNKSPQELQQLKDVILQVHSALQKMSEETRSDRARRKPPKAQKAQN
Ga0268264_102410901	3300028381	Switchgrass Rhizosphere	MAISNELSSDVAVALLAKDKSPQELKQLKDIILQVHSALQEMSAETRADRLKKIP
Ga0268264_103102092	3300028381	Switchgrass Rhizosphere	MAISNELSSDVAVALLAQDKSPQELKQLKDIILQVHSALQEMSAETRADRMKKTPPKSEAKGTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065662

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences