Metagenome / Metatranscriptome Family F065652

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065652
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	91 residues
Representative Sequence	MTKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Number of Associated Samples	100
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.17 %
% of genes near scaffold ends (potentially truncated)	22.83 %
% of genes from short scaffolds (< 2000 bps)	72.44 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.213 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.709 % of family members)
Environment Ontology (ENVO)	Unclassified (28.346 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.21% β-sheet: 1.68% Coil/Unstructured: 73.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF04909	Amidohydro_2	18.11
PF00581	Rhodanese	3.15
PF08281	Sigma70_r4_2	3.15
PF00903	Glyoxalase	3.15
PF02081	TrpBP	3.15
PF01156	IU_nuc_hydro	2.36
PF00211	Guanylate_cyc	2.36
PF03992	ABM	2.36
PF08241	Methyltransf_11	1.57
PF02517	Rce1-like	1.57
PF14579	HHH_6	1.57
PF00232	Glyco_hydro_1	1.57
PF00293	NUDIX	1.57
PF00106	adh_short	1.57
PF07885	Ion_trans_2	0.79
PF13750	Big_3_3	0.79
PF03641	Lysine_decarbox	0.79
PF01047	MarR	0.79
PF00441	Acyl-CoA_dh_1	0.79
PF07690	MFS_1	0.79
PF12697	Abhydrolase_6	0.79
PF02686	Glu-tRNAGln	0.79
PF01252	Peptidase_A8	0.79
PF13936	HTH_38	0.79
PF12681	Glyoxalase_2	0.79
PF14329	DUF4386	0.79
PF02300	Fumarate_red_C	0.79
PF00268	Ribonuc_red_sm	0.79
PF01186	Lysyl_oxidase	0.79
PF04140	ICMT	0.79
PF01165	Ribosomal_S21	0.79
PF00535	Glycos_transf_2	0.79
PF12730	ABC2_membrane_4	0.79
PF00805	Pentapeptide	0.79
PF01416	PseudoU_synth_1	0.79
PF01243	Putative_PNPOx	0.79
PF00174	Oxidored_molyb	0.79
PF00440	TetR_N	0.79
PF02494	HYR	0.79
PF01144	CoA_trans	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.36
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	2.36
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	1.57
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.57
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	1.57
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.79
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.79
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.79
COG3029	Fumarate reductase subunit C	Energy production and conversion [C]	0.79
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.79
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.79
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.79
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.79
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.79
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.79
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.79
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	0.79
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	63.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	63.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.09 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.78 %
unclassified Ignavibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.78 %
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000880\|AL20A1W_1116212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1164	Open in IMG/M
3300000887\|AL16A1W_10007690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	749	Open in IMG/M
3300001535\|A3PFW1_10385793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	849	Open in IMG/M
3300001536\|A1565W1_10116752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300001537\|A2065W1_10306095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300002025\|smpD1_1120581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	940	Open in IMG/M
3300002907\|JGI25613J43889_10047054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1218	Open in IMG/M
3300005167\|Ga0066672_10394288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	905	Open in IMG/M
3300005171\|Ga0066677_10155410	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300005172\|Ga0066683_10044889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2595	Open in IMG/M
3300005176\|Ga0066679_10717702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300005177\|Ga0066690_10007704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5270	Open in IMG/M
3300005186\|Ga0066676_10335273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300005187\|Ga0066675_10790603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300005435\|Ga0070714_100441098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1236	Open in IMG/M
3300005445\|Ga0070708_100035297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4355	Open in IMG/M
3300005445\|Ga0070708_100237386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1711	Open in IMG/M
3300005445\|Ga0070708_100258933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1635	Open in IMG/M
3300005445\|Ga0070708_100259217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1634	Open in IMG/M
3300005445\|Ga0070708_101060169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	759	Open in IMG/M
3300005450\|Ga0066682_10265853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1105	Open in IMG/M
3300005467\|Ga0070706_100046166	All Organisms → cellular organisms → Bacteria	4022	Open in IMG/M
3300005468\|Ga0070707_100019523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6385	Open in IMG/M
3300005468\|Ga0070707_100261550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1683	Open in IMG/M
3300005468\|Ga0070707_100362802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1407	Open in IMG/M
3300005471\|Ga0070698_100042820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4644	Open in IMG/M
3300005471\|Ga0070698_100212557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1868	Open in IMG/M
3300005471\|Ga0070698_100226045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1805	Open in IMG/M
3300005537\|Ga0070730_10056237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2819	Open in IMG/M
3300005537\|Ga0070730_10549099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300005553\|Ga0066695_10249227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300005568\|Ga0066703_10118921	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300005574\|Ga0066694_10090817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1422	Open in IMG/M
3300005575\|Ga0066702_10492938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	747	Open in IMG/M
3300006028\|Ga0070717_10174909	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300006046\|Ga0066652_101087096	All Organisms → cellular organisms → Bacteria → Terrabacteria group	758	Open in IMG/M
3300006755\|Ga0079222_10829598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300006755\|Ga0079222_10975903	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006804\|Ga0079221_11725640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300006806\|Ga0079220_10174867	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300006852\|Ga0075433_10601381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	965	Open in IMG/M
3300006854\|Ga0075425_100372505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1644	Open in IMG/M
3300006854\|Ga0075425_102136676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300006903\|Ga0075426_10117811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1908	Open in IMG/M
3300006914\|Ga0075436_100038287	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300006914\|Ga0075436_101326327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300007255\|Ga0099791_10574689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300007258\|Ga0099793_10188524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	986	Open in IMG/M
3300007265\|Ga0099794_10144889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1204	Open in IMG/M
3300007788\|Ga0099795_10043450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1608	Open in IMG/M
3300009038\|Ga0099829_10100657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2248	Open in IMG/M
3300009038\|Ga0099829_10585593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300009089\|Ga0099828_10000319	All Organisms → cellular organisms → Bacteria	28650	Open in IMG/M
3300009089\|Ga0099828_11267330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300009090\|Ga0099827_10051521	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300009143\|Ga0099792_10056304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1934	Open in IMG/M
3300009162\|Ga0075423_10500662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1278	Open in IMG/M
3300010159\|Ga0099796_10166772	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	876	Open in IMG/M
3300010159\|Ga0099796_10585808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300011269\|Ga0137392_11060096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	665	Open in IMG/M
3300011270\|Ga0137391_10259904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1503	Open in IMG/M
3300011270\|Ga0137391_10651519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	879	Open in IMG/M
3300011271\|Ga0137393_10700933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	867	Open in IMG/M
3300011991\|Ga0120153_1000485	All Organisms → cellular organisms → Bacteria	21912	Open in IMG/M
3300011991\|Ga0120153_1001182	All Organisms → cellular organisms → Bacteria	12560	Open in IMG/M
3300011991\|Ga0120153_1029376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1144	Open in IMG/M
3300011996\|Ga0120156_1007570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2359	Open in IMG/M
3300011996\|Ga0120156_1010519	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300011998\|Ga0120114_1000341	All Organisms → cellular organisms → Bacteria	16951	Open in IMG/M
3300012010\|Ga0120118_1003117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5455	Open in IMG/M
3300012096\|Ga0137389_10285277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1395	Open in IMG/M
3300012189\|Ga0137388_10855459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	842	Open in IMG/M
3300012198\|Ga0137364_10078302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2279	Open in IMG/M
3300012204\|Ga0137374_10044951	All Organisms → cellular organisms → Bacteria	4621	Open in IMG/M
3300012205\|Ga0137362_10579697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	968	Open in IMG/M
3300012206\|Ga0137380_10545194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300012207\|Ga0137381_10006394	All Organisms → cellular organisms → Bacteria	8755	Open in IMG/M
3300012207\|Ga0137381_10110837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2335	Open in IMG/M
3300012209\|Ga0137379_10570662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1039	Open in IMG/M
3300012285\|Ga0137370_10443087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	790	Open in IMG/M
3300012349\|Ga0137387_10151890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1649	Open in IMG/M
3300012357\|Ga0137384_10093131	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300012361\|Ga0137360_10458364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1081	Open in IMG/M
3300012362\|Ga0137361_10278902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1527	Open in IMG/M
3300012363\|Ga0137390_10076611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3282	Open in IMG/M
3300012363\|Ga0137390_10183867	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300012363\|Ga0137390_11641961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300012373\|Ga0134042_1069289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300012917\|Ga0137395_10015128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4344	Open in IMG/M
3300012925\|Ga0137419_11201536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300013294\|Ga0120150_1058675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300013501\|Ga0120154_1141667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300013758\|Ga0120147_1012767	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300013765\|Ga0120172_1002502	All Organisms → cellular organisms → Bacteria → Proteobacteria	6875	Open in IMG/M
3300014058\|Ga0120149_1006508	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300014157\|Ga0134078_10441245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300014823\|Ga0120170_1013722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2488	Open in IMG/M
3300017657\|Ga0134074_1304706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300018468\|Ga0066662_10222305	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300018468\|Ga0066662_10444057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1159	Open in IMG/M
3300018468\|Ga0066662_10777365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300018482\|Ga0066669_11327930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	651	Open in IMG/M
3300019869\|Ga0193705_1091891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300019879\|Ga0193723_1007590	All Organisms → cellular organisms → Bacteria	3567	Open in IMG/M
3300020001\|Ga0193731_1149239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300021344\|Ga0193719_10023105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2660	Open in IMG/M
3300025910\|Ga0207684_10000026	All Organisms → cellular organisms → Bacteria	316711	Open in IMG/M
3300025910\|Ga0207684_10022287	All Organisms → cellular organisms → Bacteria	5407	Open in IMG/M
3300025922\|Ga0207646_10000169	All Organisms → cellular organisms → Bacteria	88722	Open in IMG/M
3300025922\|Ga0207646_10011140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8728	Open in IMG/M
3300026320\|Ga0209131_1130946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1291	Open in IMG/M
3300026320\|Ga0209131_1353433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300026322\|Ga0209687_1115266	All Organisms → cellular organisms → Bacteria → Terrabacteria group	867	Open in IMG/M
3300026329\|Ga0209375_1241770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300026330\|Ga0209473_1034680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2264	Open in IMG/M
3300026342\|Ga0209057_1110443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1068	Open in IMG/M
3300026550\|Ga0209474_10160343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1459	Open in IMG/M
3300026551\|Ga0209648_10470822	Not Available	760	Open in IMG/M
3300027671\|Ga0209588_1194940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300027725\|Ga0209178_1130442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	857	Open in IMG/M
3300027846\|Ga0209180_10071013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1952	Open in IMG/M
3300027875\|Ga0209283_10000477	All Organisms → cellular organisms → Bacteria	20300	Open in IMG/M
3300027882\|Ga0209590_10078334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1922	Open in IMG/M
3300028716\|Ga0307311_10267821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300028819\|Ga0307296_10102342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1535	Open in IMG/M
3300031231\|Ga0170824_128001684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300032205\|Ga0307472_101247086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.49%
Host-Associated	Host-Associated	5.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.49%
Plants	Host-Associated → Plants	5.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.53%
Loam	Environmental → Terrestrial → Soil → Loam	14.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.51%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	14.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002025	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL20A1W_11162121	3300000880	Permafrost	MKRRLVGVVGVMGLMSTFGIIQVSADDTGYNPPPQAATVCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGAATGPANSGLGQACIGQNP*
AL16A1W_100076902	3300000887	Permafrost	MKRRLVGVVGVIGLMSTFGIIQVSADDTGYNPPPQAATVCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGAATGPANSGLGQACIGQNP*
A3PFW1_103857931	3300001535	Permafrost	MAKRLFGLIGVLSLFAGVGVIQASADDTGYNPPPQAVANCDAGHGAFGAFSHHFEFQIPSGFNWISADAKEDGGLGHDTGPTNSGFSAFCQAQ*
A1565W1_101167521	3300001536	Permafrost	MIRKLASVIGLAAMLSSFGVIQASAADDGYHQPPTAATVCDAGHGAFGAFSHHFLSYDGMNWIAADAREDGGLGASTGPANSGLGQACNPSVS*
A2065W1_103060951	3300001537	Permafrost	PRLWWNERIESSQSMGVSMTKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCNAGHGAFGAFSHHFASNDGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
smpD1_11205811	3300002025	Permafrost And Active Layer Soil	DVMTQRLFGLIGVLALLSGVGVIQASAADDGYSQPPSAAANCDAGHGAFGAFSHHFASYDNGVNWIAADAKEDVGLGHATGPTNSGFSQFCKTQ*
JGI25613J43889_100470542	3300002907	Grasslands Soil	MSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFEDPSGFNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0066672_103942881	3300005167	Soil	MRKKVFGVISVVGLLCGVGLVQVSANDDGYNQPPAAAANCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCQAQ*
Ga0066677_101554102	3300005171	Soil	MTRKFLALIGFLSLFFGLGLVQASADDTGYNPPPAVAGNCDAGHGAFGAFSHHFAANGGVNWIAADANEDGGLGHDTGPTESGFSQFCKTQ*
Ga0066683_100448895	3300005172	Soil	MTRRLVALIGFLSLFLGLGVVQASADDDGYNPPPAVADNCNAGHGAFGAFSHHFAAYGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0066679_107177022	3300005176	Soil	MTRKFLALIGFLSLFFGLGLVQASADDTGYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKEDGGLGHDTGPTESGFSQFCKTQ*
Ga0066690_100077047	3300005177	Soil	MRKKVFGVISVVGLLCGVGLVQVSANDDGYNQPPAAAANCDAGHGAFGAFSHHFESNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCQAQ*
Ga0066676_103352732	3300005186	Soil	MTRRIVALIGFLTLFLGLGLVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFAAYGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0066675_107906032	3300005187	Soil	MTRKLLALIGFLSLFFGLGLVQASADDTGYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKEDGGLGHDTGPTESGFSQFCKTQ*
Ga0070714_1004410981	3300005435	Agricultural Soil	MTRKVLAILGCSSLFFGFGVVQASADDNGYNPPPAVAGVCDAGHGAFGAFSHHFASNGGVNWIAADAQEDGGLGHDTGPTNSGFSQFCQTQ*
Ga0070708_1000352973	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKIFGLVGIAGLLFGFGTVTSFAADDGFSQPPAAAANCDAGHGAFGAFSHHFEFQDPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070708_1002373861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDCIWGDTGVCVKKRLFGLIGVFGLLCGIGVVQASADDIGYNPPPAVADNCNAGHGAFGAFSHHFASNGGVNWIAIDAKEDGGMGHETGPTNSGFSAFCKTQ*
Ga0070708_1002589333	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAGLLFGFGTMTASAADDGYSQPPSAAANCDAGHGAFGAFSHHFEFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070708_1002592173	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIVGLLFGFGTVTASAADDGYGQPPSAAANCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070708_1010601692	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAGLLFGFGTVTASAADDGYSQPPSAAANCDAGHGAFGAFSHHFEFQDPSGFNWIAADA*
Ga0066682_102658532	3300005450	Soil	MTRRLVALIGFLSLFLGLGVVQASADDDGYNPPPAVADNCNAGHGAFGAFSHHFAANGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0070706_1000461666	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRLFGFIGVFALLWGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFAFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070707_1000195235	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MARRLFGFMGVFALLCGIGVVQVSADDIGYNPPPAAQANCDAGHGAFGAFSHHFEFQTLSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070707_1002615502	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAGLLFGFGTISASAADDGYSQPPAAAANCDAGHGAFGAFSHHFLFQDPAGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070707_1003628022	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAGLLFGFGTVTASAADDGYSQPPSAAANCDAGHGAFGAFSHHFEFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070698_1000428205	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAGLLFGFGTVSASAADDGYSQPPAAAANCDAGHGAFGAFSHHFLFQDPSGINWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070698_1002125572	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAALLFGFGTVTASAADDGYSQPPSAAANCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070698_1002260452	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRLFGFIGVFALLWGIGVVQASADDIGYNPPPAAQAICDAGHGAFGAFSHHFAFQTPSGINWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0070730_100562376	3300005537	Surface Soil	MSRRFLSFIGVFALFCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFEFQDPSGFNWIAADAKEDGGLGHATGPTNSGFSQFCKTQ*
Ga0070730_105490992	3300005537	Surface Soil	MAKKLFGLIGVFGLLSGFGVVQVSADDTGYNPPPAAQANCDAGHGAFGAFSHHFEFQVPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0066695_102492273	3300005553	Soil	MTRRLVALIGFLSLFLGLGLVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFATNGGINWIAADAKE
Ga0066703_101189211	3300005568	Soil	GVISVVGLLCGVGLVQVSANDDGYNQPPAAAANCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCQAQ*
Ga0066694_100908172	3300005574	Soil	MTRRLVALIGFLSLFLGLGLVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFATNGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0066702_104929381	3300005575	Soil	MTRRFVTLFGLVGLFCGLGVVQASANDTGYNPPPAVAGNCDAGHGAFGAFSHHFAFSPAGEFPAGTNWIAADAQEDGGLGHDTGPTNSG
Ga0070717_101749092	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRLLGLFGVFGLLCGFGVVQVSADDTGYNPPPAAQANCDAGHGAFGAFSHHFEFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0066652_1010870961	3300006046	Soil	MTRRLVALIGFLSLFLGLGVVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFATNGGINWIAADAKEDG
Ga0079222_108295982	3300006755	Agricultural Soil	MTRKVLAILGCSSLFFGFGVVQASADDNGYNPPPAVAGNCDAGHGAFGAFSHHFASNGGVNWIAADAQEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0079222_109759031	3300006755	Agricultural Soil	PASADDNGYNPPPAVLGKCDAGHGAFGAFDHHFASSGGVNWIAIAAQQGGIGDTTGPANSGLGEACRTA*
Ga0079221_117256402	3300006804	Agricultural Soil	MAKKVLGLVGIAGLLFGFGTVTASAADDGYSQPPAAAANCDAGHGAFGAFSHHFLFQDPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0079220_101748672	3300006806	Agricultural Soil	MARKVIGLFGVAGLLFGFGAIPAVAADDGYNQPPAAAANCDAGHGAFGAFSHHFEFQDPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0075433_106013812	3300006852	Populus Rhizosphere	MKRRVFGVLGVVGLLAAWGTVPATADDNGYNPPPAVADNCDAGHGAFGAFSHHFATNGGVNWISADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0075425_1003725051	3300006854	Populus Rhizosphere	MKKLVCLLGVFSLFGVFGVIPVSADDTGYNPPPAVADKCDAGHGAFGAFSHHFAAYGGINWIAQDAKEDGGMGHETGPTESGFSQFCKTQ*
Ga0075425_1021366761	3300006854	Populus Rhizosphere	MKKLVCLLGVLSLFGVMGVVPVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFAAYGGINWIAQDAKEDGGMGHETGPTESGFSQFCKTQ*
Ga0075426_101178113	3300006903	Populus Rhizosphere	MSRRLFGFIGVFALMWGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFEFQIPSGFNWIAADAKEDGGLGHATGPTNSGFSQFCKTQ*
Ga0075436_1000382876	3300006914	Populus Rhizosphere	MSRRLFGFIGVFALLWGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFEFQTPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0075436_1013263272	3300006914	Populus Rhizosphere	MAKRLFGLFGVFGLLCGFGVVQVSADDTGYNPPPAAQANCDAGHGAFGAFSHHFEFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0099791_105746891	3300007255	Vadose Zone Soil	MEVQMSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFEDPSGFNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0099793_101885242	3300007258	Vadose Zone Soil	MRRRFLGLIGVLGLLCGLGIVQASADYNPPPAVADNCNAGHGAFGAFSHHFAAYDGVNWIAADAKEDGGMGHETGPTNSGFSAFCKTQ*
Ga0099794_101448892	3300007265	Vadose Zone Soil	MTKRLFGLIGALALLSAMGIIQASAADDGYHQPPQAAANCDAGHGAFGAFSHHFASNAGVNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0099795_100434502	3300007788	Vadose Zone Soil	MRRRFFGLIGVFGLLCGLGMVQASADYNPPPAVADNCDAGHGAFGAFSHHFAANDGVNWIAADAKEDGGLGHDTGPTNSGFSAFCKTQ*
Ga0099829_101006573	3300009038	Vadose Zone Soil	MGVFALLCGVGVVQVSADDIGYNPPPAAQANCDAGHGAFGAFSHHFEFQIPSGVNWIAADAKEDGGLGHATGPTNSGFSQFCKTQ*
Ga0099829_105855932	3300009038	Vadose Zone Soil	MEVQMSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFQFHDPSGFNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0099828_1000031923	3300009089	Vadose Zone Soil	MAKRLLGVVGVFGLLSGLGMVTASANDDGYNQPPAAAANCDAGHGAFGAFDHHFASNGGVNWISADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0099828_112673301	3300009089	Vadose Zone Soil	MEVQMSRRLFGFMGVFALLCGVGVVQVSADDIGYNPPAAAQANCDAGHGAFGAFSHHFLFQDPSGFNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0099827_100515211	3300009090	Vadose Zone Soil	MAKKVLGLVGIAGLLFGFGTVTASAADDGYSQPPAAAANCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGIGHDTGPTNSGFSQFCKTQ*
Ga0099792_100563043	3300009143	Vadose Zone Soil	MRRRFFGLIGVFGLLCGLGMVQASADYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKEDGGLGHDTGPTNSGFSAFCKTQ*
Ga0075423_105006622	3300009162	Populus Rhizosphere	MKRRAIGVLGVVGLLAAWGTVPATADDNGYNPPPAVADNCDAGHGAFGAFSHHFATNGGVNWISADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0099796_101667722	3300010159	Vadose Zone Soil	YMGDNTGVPMRRRFFGLIGVFGLLCGLGMVQASADYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKEDGGLGHDTGPTNSGFSAFCKTQ*
Ga0099796_105858081	3300010159	Vadose Zone Soil	MRRRFFGLIGVFGLLCGLGMVQASADYNPPPAVADNCDAGHGAFGAFSHHFAANDGVNWIAADAKEDGGLGHDTGPTNSGFSA
Ga0137392_110600961	3300011269	Vadose Zone Soil	GLLCGFGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFQFQDPSGFNWFAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0137391_102599042	3300011270	Vadose Zone Soil	MAKKIFGLVGIAGLLFGFGTVAASAADDGYSQPPSAAANCDAGHGAFGAFSHHFEFQNPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0137391_106515192	3300011270	Vadose Zone Soil	MEVQMSRRLFGFMGVFALLCGVGVVQVSADDIGYNPPPAAQANCDAGHGAFGAFSHHFEFQIPSGVNWIAADAKEDGGLGHATGPTNSGFSQFCKTQ*
Ga0137393_107009332	3300011271	Vadose Zone Soil	MEVQMSRRLFGFIGVFAMLCGIGVVQASANDIGYNPPPAAQANCDAGHGAFGAFSHHFQFQIPAGINWIAADAKEDGGIGHDTGPTNSGFSQFCKTQ*
Ga0120153_100048519	3300011991	Permafrost	MGLMSTFGIIQVSADDTGYNPPPQAATVCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGAATGPANSGLGQACIGQNP*
Ga0120153_10011826	3300011991	Permafrost	MLSSFGVIQASEADDGYHQPPTAAAVCDAAHGAFGAFSHRFLSYDGVNWIAAEAREDGGLGASTGPANSGLGQACNPSIS*
Ga0120153_10293762	3300011991	Permafrost	MTQRLFGLIGVLALLSGVGVIQASAADDGYSQPPSAAANCDAGHGAFGAFSHHFASYDNGVNWIAADAKEDVGLGHATGPTNSGFSQFCKTQ*
Ga0120156_10075704	3300011996	Permafrost	MTKRLFGLIGALALLSSAGVIQASAADDGYHQPPQAAANCDAGHGAFGAFSHHFATNGGVNWIAADAKEDGGLGHDTGPTNSGFSQSCKTQ*
Ga0120156_10105191	3300011996	Permafrost	MTQRLFGLIGVLALLSGVGVIQASAADDGYSQPPSAAANCDAGHGAFGAFSHHFATNDGVNWIAADAKEDGGLGH
Ga0120114_100034116	3300011998	Permafrost	LSSAGVIQASAADDGYHQPPQAAANCDAGHGAFGAFSHHFATNGGVNWIAADAKEDGGLGHDTGPTNSGFSQSCKTQ*
Ga0120118_10031179	3300012010	Permafrost	MSTFGIIQVSADDTGYNPPPQAATVCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGAATGPANSGLGQ
Ga0137389_102852772	3300012096	Vadose Zone Soil	MAKKVLGLVGLAGLLFGFGTVAASAADDGYSQPPAAAANCDAGHGAFGAFSHHFLFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0137388_108554592	3300012189	Vadose Zone Soil	MEVQMSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFQDPSGFNWIAADAKEDGGIGHDTGPTNPGFSQFCKTQ*
Ga0137364_100783023	3300012198	Vadose Zone Soil	MTRRLVALIGFLSLFLGLGVVQASADDDGYNPPPAVADNCNAGHGAFGAFSHHFVAYGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0137374_100449511	3300012204	Vadose Zone Soil	MTRKLFGVIGVLALLSGIGVATVSADDNGYNPPPAVTDNCQAGHGAFGAFSHHFQFQDPSGFNWIADAAQQGGIGDTTGPTNSGFAQFCRTQ*
Ga0137362_105796971	3300012205	Vadose Zone Soil	FALLCGVGVVQASADDTGYNQPPAAQANCDAGHGAFGAFSHHFLFQDPPGFNWIAADAKEDGGIGHDTGPTNSGFSQFCKTQ*
Ga0137380_105451942	3300012206	Vadose Zone Soil	MEVHRMEVHMSRRLFVFVGVFALLCGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFQFQIPSGVNWIAADAKEDGGIGHDTGPTNSGFSQFCMTP*
Ga0137381_100063947	3300012207	Vadose Zone Soil	MAKKVLGLVGIAGLLFGFGTVTASAADDGYSQPPAAAANCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0137381_101108374	3300012207	Vadose Zone Soil	MLVRYSDPRVRGASRQARMEVQVSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFQDPSGFNWIAADAKEDGGLGHATGPNNSSFSQFCKTQ*
Ga0137379_105706622	3300012209	Vadose Zone Soil	MSRRLFVFVGVFALLCGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFQFQIPSGVNWIAADAKEDGGIGHDTGPTNSGFSQFCMTP*
Ga0137370_104430872	3300012285	Vadose Zone Soil	MTRRLVALIGFLSLFLGLGVVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFVAYGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0137387_101518901	3300012349	Vadose Zone Soil	FGFGTVTASAADDGYSQPPAAAANCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0137384_100931312	3300012357	Vadose Zone Soil	MEVHMSRRLFVFVGVFALLCGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFQFQIPSGVNWIAADAKEDGGIGHDTGPTNSGFSQFCMTP*
Ga0137360_104583642	3300012361	Vadose Zone Soil	MEVQMSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFQDPSGFNWIAADAKEDGGIGHDTGPTNSGFSQFCKTQ*
Ga0137361_102789022	3300012362	Vadose Zone Soil	MQAGMEVQMSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFQDPPGFNWIAADAKEDGGIGHDTGPTNSGFSQFCKTQ*
Ga0137390_100766112	3300012363	Vadose Zone Soil	MAKKIFGLVGIAGLLFGFGTVAASAADDGYSQPPSAAANCDAGHGAFGAFSHHFEFQNPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCQTQ*
Ga0137390_101838672	3300012363	Vadose Zone Soil	MTKRLFGLIGALALLSGAGIIQASAADDGYHQPPQAAANCDAGHGAFGAFSHHFASNAGVNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ*
Ga0137390_116419611	3300012363	Vadose Zone Soil	GIIQASAADDGYHQPPQAAANCDAGHGAFGAFSHHFAFDGGVNWIAADAKEDGGLGHATGPDNSGFSQFCKTQ*
Ga0134042_10692891	3300012373	Grasslands Soil	KKPAVKWHTQRVPATVTKGVSMTRRLVALIGFPSLFLGLGVVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFATNGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0137395_100151284	3300012917	Vadose Zone Soil	MTKRLLGLIGVLGLLSGVGVIQASANDTGYNQPPAVVNNCDAGHGAFGAFDHHFQFQVPSGVNWISADAKEDGGLGHDTGPTNSGFSQFCKTQ*
Ga0137419_112015362	3300012925	Vadose Zone Soil	MRRRFFGLIGVFGLLCGLGMVQASADYNPPPAVADNCDAGHGAFGAFSHHFAAYDGVNWIAADVKEDGGLGHDTGPTNSGFSAFCKPQ*
Ga0120150_10586751	3300013294	Permafrost	VFNGREGDEGMCFMKRRLVGVVGVIGLMSTFGIIQVSADDTGYNPPPQAATVCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGAATGPANSGLGQACIGQNP*
Ga0120154_11416671	3300013501	Permafrost	MTQRLFGLIGVLALLSGVGVIQASAADDGYSQPPSAAANCDAGHGAFGDFSHHFATNGGVNWIAADAKEDVGLGHATGPTNSGFSQFCKTQ*
Ga0120147_10127672	3300013758	Permafrost	MLSSFGVIQASEADDGYHQPPTAAAVCDAAHGAFGAFSHRFLSYDGVNWIAAEARGDGGLGASTGPANSGLGQACNPSIS*
Ga0120172_10025024	3300013765	Permafrost	MTQRLFGLIGVLALLSGVGVIQASAADDGYSQPPSAAANCDAGHGAFGDFSHHFATNGGVNWIAADAKEDGGLGHATGPTNSGFSQFCKTQ*
Ga0120149_10065081	3300014058	Permafrost	DEGMCFMKRRLVGVVGVIGLMSTFGIIQVSADDTGYNPPPQAATVCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGAATGPANSGLGQACIGQNP*
Ga0134078_104412452	3300014157	Grasslands Soil	MTRRLVALIGFLSLFLGLGLVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFATSGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ*
Ga0120170_10137222	3300014823	Permafrost	MTQRLFGLIGVLALLSGVGVIQASAADDGYSQPPSAAANCDAGHGAFGAFSHHFATNDGVNWIAADAKEDGGLGHATGPTNSGFSQFCKTQ*
Ga0134074_13047061	3300017657	Grasslands Soil	MTRRLVALIGFLSLFLGLGVVQASADDDGYNPPPAVADNCNAGHGAFGAFSHHFAAYGGINWIAADAKED
Ga0066662_102223051	3300018468	Grasslands Soil	QRGDMTRRFVALLGFVGLFCGLGVVQASANDTGYNPPPAVAGNCDAGHGAFGAFSHHFAFSPAGEFPAGTNWIAADAQEDGGLGHDTGPTNSGLSQACRTQ
Ga0066662_104440572	3300018468	Grasslands Soil	MRKKVFGVISVVGLLCGVGLVQVSANDDGYNQPPAAAANCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCQAQ
Ga0066662_107773652	3300018468	Grasslands Soil	MTRRFVTLFGLATLFLGVGVVQASAADDGYSQPPAAAANCDAGHGAFGAFSHHFAADGGVNWIAADAQEDGGLGHDTGPTNSGFSQFCKTQ
Ga0066669_113279302	3300018482	Grasslands Soil	MTRRLVALIGFLSLYLGLGVVQASADDDGYNPPPAVADNCNAGHGAFGAFSHHFAANGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ
Ga0193705_10918912	3300019869	Soil	MTKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDT
Ga0193723_10075903	3300019879	Soil	MGVSMTKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0193731_11492392	3300020001	Soil	MTKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0193719_100231051	3300021344	Soil	CGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0207684_10000026187	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKIFGLVGIAGLLFGFGTVTSFAADDGFSQPPAAAANCDAGHGAFGAFSHHFEFQDPSGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0207684_100222873	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRLFGFIGVFALLWGIGVVQASADDIGYNPPPAAQANCDAGHGAFGAFSHHFAFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0207646_1000016930	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKVLGLVGIAGLLFGFGTISASAADDGYSQPPAAAANCDAGHGAFGAFSHHFLFQDPAGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0207646_100111405	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MARRLFGFMGVFALLCGIGVVQVSADDIGYNPPPAAQANCDAGHGAFGAFSHHFEFQTLSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0209131_11309462	3300026320	Grasslands Soil	MSRRLFGFIGVFALLCGVGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFLFEDPSGFNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ
Ga0209131_13534331	3300026320	Grasslands Soil	MRRRFFGLIGVFGLLCGLGMVQASADYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKEDGGLGHDTGPTNSGFSAFCKTQ
Ga0209687_11152662	3300026322	Soil	MTRKFLALIGFLSLFFGLGLVQASADDTGYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKED
Ga0209375_12417702	3300026329	Soil	MTRRLVALIGFLSLFLGLGVVQASADDDGYNPPPAVADNCNAGHGAFGAFSHHFAANGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ
Ga0209473_10346802	3300026330	Soil	MTRKFLALIGFLSLFFGLGLVQASADDTGYNPPPAVADNCDAGHGAFGAFSHHFAANGGVNWIAADAKEDGGLGHDTGPTESGFSQFCKTQ
Ga0209057_11104433	3300026342	Soil	MTRRIVALIGFLTLFLGLGLVQASADDNGYNPPPAVADNCNAGHGAFGAFSHHFAAYGGINWIAADAKEDGGMGHETGPTNSGFSQFCKTQ
Ga0209474_101603433	3300026550	Soil	GLGLVQASADDTGYNPPPAVADNCDAGHGAFGAFSHHFATNGGFNWIAADAKEDGGLGHDTGPTESGFSQFCKTQ
Ga0209648_104708221	3300026551	Grasslands Soil	MTKRLFGVFGALALLSGAGIIQASAADDGYHQPPQAAANCDAGHGAFGLFSHHFAFDGGVNSIAADAKEDRVLGH
Ga0209588_11949401	3300027671	Vadose Zone Soil	MTKRLFGLIGALALLSAMGIIQASAADDGYHQPPQAAANCDAGHGAFGAFSHHFASNAGVNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ
Ga0209178_11304421	3300027725	Agricultural Soil	MTRKVLAILGCSSLFFGFGVVQASADDNGYNPPPAVAGNCDAGHGAFGAFSHHFASNGGVNWIAADAQEDGGLGHDTGPTNSGFSQFCKTQ
Ga0209180_100710131	3300027846	Vadose Zone Soil	MSRRLFGFIGVFGLLCGFGVVQASADDTGYNPPPAAQANCDAGHGAFGAFSHHFQFHDPSGFNWIAADAKEDGGLGHATGPNNSGFSQFCKTQ
Ga0209283_1000047714	3300027875	Vadose Zone Soil	MAKRLLGVVGVFGLLSGLGMVTASANDDGYNQPPAAAANCDAGHGAFGAFDHHFASNGGVNWISADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0209590_100783343	3300027882	Vadose Zone Soil	MAKKVLGLVGIAGLLFGFGTVTASAADDGYSQPPAAAANCDAGHGAFGAFSHHFQFQDPSGFNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0307311_102678211	3300028716	Soil	TKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQFCKTQ
Ga0307296_101023423	3300028819	Soil	MGVSMTKRLFGLIGVFGLLCGIGVVQVSADDTGYNPPPAVADNCDAGHGAFGAFSHHFASNGGVNWIAADAKEDGGLGHDTGPTNSGFSQF
Ga0170824_1280016842	3300031231	Forest Soil	AGWSSRANGDSCGVPMTKKLLGLIGVLGLLSGAGVIQVSANDDGYQQPPAAANSCDAGHGAFGAFDHHFLFEAPAGFNWIAADAKEDGGLGHATGPNNSGFSQACNAQ
Ga0307472_1012470862	3300032205	Hardwood Forest Soil	MIRKLFGLFAVLTLFGGIGVVQVSADDNGYNPPPAVADNCDAGHGAFGAFSHHFEFQDPSGFNWIAADAREDKGLGHDTGPTNSGFSLFCKTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065652

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences