Metagenome / Metatranscriptome Family F065651

Overview

Basic Information

• Family ID: F065651
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 127
• Average Sequence Length: 47 residues
• Representative Sequence: MAGTVVRESVTLAGRAERARIARAFVGGVLGPGHPCGDDAALLVS
• Number of Associated Samples: 98
• Number of Associated Scaffolds: 127

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 80.31 %
• % of genes near scaffold ends (potentially truncated): 93.70 %
• % of genes from short scaffolds (< 2000 bps): 89.76 %
• Associated GOLD sequencing projects: 94
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (51.969 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (18.898 % of family members)
• Environment Ontology (ENVO): Unclassified (25.197 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (34.646 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 53.42%
  β-sheet: 0.00%
  Coil/Unstructured: 46.58%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF11774	Lsr2	9.45
PF04461	DUF520	4.72
PF02371	Transposase_20	1.57
PF13006	Nterm_IS4	1.57
PF00872	Transposase_mut	0.79
PF07366	SnoaL	0.79
PF00589	Phage_integrase	0.79
PF00652	Ricin_B_lectin	0.79
PF00313	CSD	0.79
PF00296	Bac_luciferase	0.79
PF13814	Replic_Relax	0.79
PF03704	BTAD	0.79
PF00146	NADHdh	0.79
PF08241	Methyltransf_11	0.79
PF01548	DEDD_Tnp_IS110	0.79
PF11706	zf-CGNR	0.79
PF00441	Acyl-CoA_dh_1	0.79
PF00392	GntR	0.79
PF01494	FAD_binding_3	0.79
PF01243	Putative_PNPOx	0.79
PF13602	ADH_zinc_N_2	0.79
PF01041	DegT_DnrJ_EryC1	0.79
PF09661	DUF2398	0.79
PF00400	WD40	0.79
PF01475	FUR	0.79
PF08281	Sigma70_r4_2	0.79
PF00293	NUDIX	0.79
PF13561	adh_short_C2	0.79
PF04471	Mrr_cat	0.79
PF13191	AAA_16	0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	4.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.36
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.57
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.79
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.79
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.79
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.79
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.79
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.79
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.79
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.79
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.79
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.79
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.79
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.79
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.79
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.79

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.97 %
Unclassified	root	N/A	48.03 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.97 %
Unclassified	root	N/A	48.03 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.97 %
Unclassified	root	N/A	48.03 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.61 %
Unclassified	root	N/A	48.03 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.61 %
Unclassified	root	N/A	48.03 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.94 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	21.26 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.57 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.57 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	18.11 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.36 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Bogoriellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae	0.79 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.79 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	18.11 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.79 %
Georgenia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia	0.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.79 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	18.11 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Actinomadura violacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura violacea	0.79 %
Streptacidiphilus fuscans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus fuscans	0.79 %
Georgenia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia	0.79 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.03 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	18.11 %
Microbispora sp. ATCC PTA-5024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	1.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.57 %
Actinomadura violacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura violacea	0.79 %
Streptacidiphilus fuscans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus fuscans	0.79 %
Georgenia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia	0.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300003990|Ga0055455_10069755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995
3300005435|Ga0070714_100867717	Not Available	876
3300005435|Ga0070714_101757817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	605
3300005435|Ga0070714_101939023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	575
3300005436|Ga0070713_102219814	Not Available	532
3300005437|Ga0070710_10058602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2185
3300005437|Ga0070710_11205770	Not Available	559
3300005439|Ga0070711_100095332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2153
3300005439|Ga0070711_101895892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. ATCC PTA-5024	524
3300006755|Ga0079222_10862120	Not Available	752
3300006755|Ga0079222_12078329	Not Available	561
3300006852|Ga0075433_10571010	Not Available	994
3300007982|Ga0102924_1207634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	843
3300009545|Ga0105237_12293473	Not Available	550
3300009672|Ga0116215_1485676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	534
3300009839|Ga0116223_10740689	Not Available	563
3300010048|Ga0126373_10742998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041
3300010361|Ga0126378_12666978	Not Available	571
3300010369|Ga0136643_10553596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	750
3300010866|Ga0126344_1231093	Not Available	552
3300010867|Ga0126347_1152245	Not Available	519
3300010869|Ga0126359_1392479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1552
3300012177|Ga0153943_1104750	Not Available	604
3300012209|Ga0137379_11673437	Not Available	533
3300012210|Ga0137378_10256608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1627
3300012357|Ga0137384_10674550	Not Available	840
3300012357|Ga0137384_11168214	Not Available	613
3300012357|Ga0137384_11504905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	522
3300012357|Ga0137384_11508962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	521
3300012359|Ga0137385_10588233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936
3300012359|Ga0137385_10619014	Not Available	909
3300012944|Ga0137410_11158910	Not Available	664
3300012944|Ga0137410_11552369	Not Available	579
3300012988|Ga0164306_10718430	Not Available	796
3300014200|Ga0181526_10442045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824
3300014495|Ga0182015_10457633	Not Available	818
3300014655|Ga0181516_10566798	All Organisms → cellular organisms → Bacteria	585
3300014658|Ga0181519_10877626	Not Available	555
3300017822|Ga0187802_10410284	Not Available	537
3300017926|Ga0187807_1068898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1101
3300017926|Ga0187807_1298757	Not Available	534
3300017928|Ga0187806_1086078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991
3300017942|Ga0187808_10089673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330
3300017970|Ga0187783_10690747	Not Available	737
3300018026|Ga0187857_10220132	Not Available	880
3300018044|Ga0187890_10670136	Not Available	585
3300018046|Ga0187851_10240079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1064
3300018046|Ga0187851_10355773	Not Available	842
3300018046|Ga0187851_10371141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	821
3300018058|Ga0187766_10926963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616
3300020582|Ga0210395_10001451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18371
3300020583|Ga0210401_10474972	All Organisms → cellular organisms → Bacteria	1113
3300021180|Ga0210396_10254624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1560
3300021180|Ga0210396_10276218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1491
3300021180|Ga0210396_11541889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	545
3300021404|Ga0210389_10047053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3310
3300021406|Ga0210386_11080004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Bogoriellaceae → Georgenia	682
3300021478|Ga0210402_11784155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	541
3300025134|Ga0207416_1101561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034
3300025612|Ga0208691_1076046	Not Available	758
3300025929|Ga0207664_10006233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8194
3300025929|Ga0207664_10861922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	814
3300025929|Ga0207664_10894306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797
3300025929|Ga0207664_11745471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	545
3300025944|Ga0207661_11420333	Not Available	637
3300027110|Ga0208488_1065817	Not Available	605
3300027517|Ga0209113_1063767	All Organisms → cellular organisms → Bacteria	547
3300027882|Ga0209590_10293406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1043
3300027884|Ga0209275_10573890	Not Available	646
3300027905|Ga0209415_11147880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	501
3300028047|Ga0209526_10145284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662
3300028747|Ga0302219_10292515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	633
3300028775|Ga0302231_10409356	Not Available	572
3300028780|Ga0302225_10505873	Not Available	563
3300028781|Ga0302223_10007032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4759
3300028789|Ga0302232_10278440	Not Available	827
3300028789|Ga0302232_10535986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	575
3300028806|Ga0302221_10531597	Not Available	513
3300028879|Ga0302229_10427296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	588
3300028882|Ga0302154_10182851	Not Available	1075
3300029883|Ga0311327_10565247	Not Available	688
3300029910|Ga0311369_11480259	Not Available	510
3300029943|Ga0311340_10003361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21903
3300029951|Ga0311371_12593081	Not Available	512
3300029988|Ga0302190_10311014	Not Available	615
3300029999|Ga0311339_10521674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202
3300030043|Ga0302306_10144111	Not Available	920
3300030053|Ga0302177_10016645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4759
3300030056|Ga0302181_10345208	Not Available	651
3300030399|Ga0311353_11154848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	641
3300030494|Ga0310037_10382357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	586
3300030503|Ga0311370_11826340	Not Available	616
3300030520|Ga0311372_12856705	Not Available	528
3300030524|Ga0311357_10332310	Not Available	1449
3300030580|Ga0311355_10219671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1972
3300030739|Ga0302311_10481573	Not Available	857
3300030878|Ga0265770_1129093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	539
3300031233|Ga0302307_10214326	Not Available	992
3300031525|Ga0302326_10488532	Not Available	1871
3300031525|Ga0302326_11273898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1004
3300031670|Ga0307374_10534654	Not Available	617
3300031715|Ga0307476_10798438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	698
3300031823|Ga0307478_11096036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	664
3300031879|Ga0306919_10892741	Not Available	682
3300032160|Ga0311301_12989497	Not Available	509
3300032160|Ga0311301_13009366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	506
3300032782|Ga0335082_11458851	Not Available	555
3300032805|Ga0335078_10011236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13279
3300032805|Ga0335078_10061543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5513
3300032805|Ga0335078_11802688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665
3300032805|Ga0335078_11937634	Not Available	634
3300032828|Ga0335080_11133192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790
3300032895|Ga0335074_10070275	Not Available	4732
3300032895|Ga0335074_10310636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1792
3300032895|Ga0335074_11239473	Not Available	624
3300032896|Ga0335075_10478310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura violacea	1284
3300032896|Ga0335075_10933096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790
3300032896|Ga0335075_11352661	Not Available	604
3300032898|Ga0335072_10095669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus fuscans	3814
3300032954|Ga0335083_10050655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4398
3300032955|Ga0335076_10671349	Not Available	918
3300032955|Ga0335076_11341818	Not Available	600
3300033004|Ga0335084_10233428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1908
3300033134|Ga0335073_11672228	Not Available	603
3300033158|Ga0335077_11348136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690
3300033545|Ga0316214_1016015	Not Available	1036
3300034199|Ga0370514_032716	Not Available	1290

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.06%
Host-Associated	Host-Associated	3.94%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.68%
Aquatic	Environmental → Aquatic	13.39%
Plants	Host-Associated → Plants	2.36%
Arthropoda	Host-Associated → Arthropoda	0.79%
Fungi	Host-Associated → Fungi	0.79%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.42%
Peat	Environmental → Terrestrial → Peat	21.26%
Freshwater	Environmental → Aquatic → Freshwater	11.02%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.57%
Marine	Environmental → Aquatic → Marine	0.79%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.11%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.02%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.57%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Clay	Environmental → Terrestrial → Soil → Clay	0.79%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.15%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.79%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	18.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	14.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	5.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.36%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.36%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.36%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.79%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.79%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental
3300029883	I_Bog_E2 coassembly	Environmental
3300029910	III_Palsa_E2 coassembly	Environmental
3300029943	I_Palsa_N3 coassembly	Environmental
3300029951	III_Palsa_N1 coassembly	Environmental
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental
3300029999	I_Palsa_E3 coassembly	Environmental
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental
3300030399	II_Palsa_E2 coassembly	Environmental
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental
3300030503	III_Palsa_E3 coassembly	Environmental
3300030520	III_Palsa_N2 coassembly	Environmental
3300030524	II_Palsa_N3 coassembly	Environmental
3300030580	II_Palsa_N1 coassembly	Environmental
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055455_100697552	3300003990	Natural And Restored Wetlands	MAEAAVQESVTLAGRAERARVARTFTVGVLGPGHPCKNDAAL
Ga0070714_1008677172	3300005435	Agricultural Soil	MVRVAVRESVTLAGRAERARVARTFVSEVLGPGHPCGDVAVL
Ga0070714_1017578171	3300005435	Agricultural Soil	VRESVTLAGRAERARAARTFVGEVLGPGHPYGDAAVLLVRDLR*
Ga0070714_1019390231	3300005435	Agricultural Soil	MARVVVRESVTLAGRAERARAARTFVSEVLGLGHPCGDVAVLLVSEIFGNSVRHSGS
Ga0070713_1022198142	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MARVVVRESVTLAGRAERARAARTFVSEVLGLGHPCGDVAVLLVSEI
Ga0070710_100586024	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VARAVVRESVTVAGRAERARMARAFTAGVLGPGHPCRDDAALLVSELFGNSI
Ga0070710_112057702	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTEATVRETVTLAGRPERARAVSEVLGPGHPCGDVAVLLVSEIFSNSVRHSGSGAA
Ga0070711_1000953321	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAGRAERARMARAFTAGVLGPGHACRDDAALLVSELFGNSIRHSGSGAA
Ga0070711_1018958921	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTEATVRETVTLAGRAERARAARAFVGAVLGPGHPCGDDAELLVSEIFGNSVRH
Ga0079222_108621202	3300006755	Agricultural Soil	ESVTLAGRAERARAARTFVGEVLGPGHPYGDAAVLLVRDLR*
Ga0079222_120783291	3300006755	Agricultural Soil	MTKAMRESVTMAGRAERARVARVFTAGVLGPGHPCGDDAA
Ga0075433_105710101	3300006852	Populus Rhizosphere	MTKAVRESVTMAGRAERARVARVFTAGVLGPGHPCG
Ga0102924_12076341	3300007982	Iron-Sulfur Acid Spring	MGGTAIRESVTVAGRAERPRVARTFVGAVLGPGHPCEDVAVLLVSELFGN
Ga0105237_122934732	3300009545	Corn Rhizosphere	MRAAGKAGALMAGRAVRETVTLAGRAERARLARAFVEGVLGPGHPCGDVAALLVDELFVNSIRH
Ga0116215_14856761	3300009672	Peatlands Soil	MAGLEIRESVTVAGRAERARVARVFIGGVLGPGHPCGDDAALLVSELFGNS
Ga0116223_107406891	3300009839	Peatlands Soil	MARVAVRESVTLAGRAERTRAARAFVREVLGPGHPCGEAAELLVSEVFGNSVRH
Ga0126373_107429983	3300010048	Tropical Forest Soil	MTGATVRESVKVAGLVERARVVRSFVGAVLGPGHPCGD
Ga0126378_126669782	3300010361	Tropical Forest Soil	MPLARLGRVGKAGALEARAVVRESVTVAGRTERARVTRAFTAGALGPGHPCQDDAAQLVS
Ga0136643_105535961	3300010369	Termite Gut	MARVAVRESVTLAGRAERARLARAFVGGVLGPGHPSRDEAELLVSELFGNSVRY
Ga0126344_12310931	3300010866	Boreal Forest Soil	MARVAVRESVTLAGRAERARAARAFVSEMLGPGHPCGDVAILLVSEIFSNSI
Ga0126347_11522451	3300010867	Boreal Forest Soil	MAVRESVTLAGRAERARVARAFVGAVLGPGDPCMEVAVLLAAEL
Ga0126359_13924791	3300010869	Boreal Forest Soil	MAGPQIRESVTVAGRAERARVARSLAVGVLGPGHPCG
Ga0153943_11047501	3300012177	Attine Ant Fungus Gardens	MAGLAVRATMTLAGRAERARSARAFVEGLLGLGHPCADVAA
Ga0137379_116734371	3300012209	Vadose Zone Soil	MTGATVRESVKVAGLAERARVVRAFVGAVLGPGHPCEEDAVLLVSELFGNSLR
Ga0137378_102566081	3300012210	Vadose Zone Soil	MTKAVRECVTMAGRAERARVARVFTAGVLGPGHPCGDDAA
Ga0137384_106745501	3300012357	Vadose Zone Soil	MTGATIRESVKVAGLAERARVVRAFVGAVLGPGHPCEEDAVLLVSEL
Ga0137384_111682141	3300012357	Vadose Zone Soil	MARVAVRESVTLAGRAERARAARAFVSEVLGPGHPCGDVAILLVSEIFS
Ga0137384_115049051	3300012357	Vadose Zone Soil	MGGLVVRESVTLAGIAERARVARGFVAGVLGSGHPCGDEAV
Ga0137384_115089621	3300012357	Vadose Zone Soil	MTKAVRESVTMAGRTERARVARVFTAGVLGPGHPCGDDAALLVSCSAT
Ga0137385_105882331	3300012359	Vadose Zone Soil	MTGATVRESVKVAGLVERVRVVRSFVGAVLGPGHPCGDDAMLLASELFTNSLRHSS
Ga0137385_106190141	3300012359	Vadose Zone Soil	MAGLAVRESVTRAGRAERARAARRFVGEVLGPGHPCGDVTVLL
Ga0137410_111589101	3300012944	Vadose Zone Soil	MAGRAVRETVTLAGRAERARLARAFVEGVLGPGHPCGDVAAL
Ga0137410_115523691	3300012944	Vadose Zone Soil	MARVVVRESVTLAGRAERARAARAFVGEVLGPGHPCGDVAMLLVSEIFGNSVRH
Ga0164306_107184301	3300012988	Soil	MTGATVRESLKVAGLAERTRIVRSFVGAVLGPGHP
Ga0181526_104420451	3300014200	Bog	MAGLAVRESVTLAGRPERARVARTFVGAVLGPGHPCGDVAVLLVSELFGNSV
Ga0182015_104576331	3300014495	Palsa	GRGSRGAMMAGPKIRESVTVARRGERARVARAFAVGVIGSGHLCGDDAACW*
Ga0181516_105667982	3300014655	Bog	MAGRAVRETVTLAGRAERARLARAFVEGVLGPGHPCGHLAAL
Ga0181519_108776261	3300014658	Bog	MAGRAVRETVTLAGRAERARLARAFVEGVLGPGHPCGDVAALLV
Ga0187802_104102841	3300017822	Freshwater Sediment	MAGLAVRETVTLAGRADRARLARAFVEGLLGPGHPCGDVAALLVDELFVNSI
Ga0187807_10688981	3300017926	Freshwater Sediment	PGKAGALMAGLEIRESVTVAGRAERARVARAFVGGVLGPGHPCGDDAACW
Ga0187807_12987571	3300017926	Freshwater Sediment	MAGRAVRETVTLAGRAERARAARWFVSEVLGPGPPCRDDA
Ga0187806_10860781	3300017928	Freshwater Sediment	MTRVAIRESVTLAGRAERARAARAFVSEVLGPGHQCRDVAVLLASEIFGNSVQH
Ga0187808_100896733	3300017942	Freshwater Sediment	MAGRAVRETVTLAGRAERARIARSFVEGVLGPGHPCGDVA
Ga0187783_106907472	3300017970	Tropical Peatland	MAGLPVRESVTLAGRADRAGVARAFTVGVLGPGHPCGETAALLVSELFGNSVRH
Ga0187857_102201321	3300018026	Peatland	VTGLAVRESVTLAGRPERARVARTFVGAVLGPGHPCGDVAVL
Ga0187890_106701361	3300018044	Peatland	VAVRESMTLAGRAERARVARAFVSEVLGPGHPYGDVAVLLDSGPG
Ga0187851_102400792	3300018046	Peatland	MTGATVRESVSVAGRGERARVVRAFVGAVLGPGHPCGDDAVLLVSEIF
Ga0187851_103557731	3300018046	Peatland	MTGLAVRESVTLAGRAERARAARRFVGEILGPGHPCADVAILLVSEVFGN
Ga0187851_103711411	3300018046	Peatland	MAGPEIRENVTVAGRAERARVARGFVDGVLGPGHPCGDDAALLVSELFGN
Ga0187766_109269631	3300018058	Tropical Peatland	MTGATVRESVKVAGLAERAWVVRAFVGAVLGPGHPC
Ga0210395_1000145110	3300020582	Soil	MAGRAVRETVTLVGRAERTRVARAFVGGVLGAGELLVSEVFGNSIRYSGSVLPVRRSRSRSR
Ga0210401_104749721	3300020583	Soil	MAGRAVRETVTLVGRAERTRVARAFVGGVLGAGELLVSEVFGNSIRYSGSVL
Ga0210396_102546242	3300021180	Soil	VLMAGLAVLERVTLAGRAEKARVARAFVRTVLGPGHPCDEDAILLVRLVTICGR
Ga0210396_102762183	3300021180	Soil	AGALMAGLEIRESVTVAGRAERARVARAFVGGVLGPGHPYGDDAALLVSELFSNS
Ga0210396_115418891	3300021180	Soil	MAGWMVRETVTLAGRAERARVARAFVGEVLGPGHPCGDDAVLLVS
Ga0210389_100470534	3300021404	Soil	MAGLVVREAVTLAGLAERARMTRVFVSEVLGPGTPR
Ga0210386_110800041	3300021406	Soil	MAGLEIRESVTVAGRAERARVARAFVGGVLGPGHPYGDDAALLVSELFSNS
Ga0210402_117841551	3300021478	Soil	MTKAVRESVTMAGRAERARVARVFTAGVLGPGHPCGDDAALLVSCS
Ga0207416_11015612	3300025134	Iron-Sulfur Acid Spring	MAGLAVWESVTLAGRAERARVARGFVGGVLGAGHP
Ga0208691_10760461	3300025612	Peatland	MTGATVRESVKVAGLAERTRIVRSFVGAVLGPGHPCGDDAVLLVSELFANSLRHSGSG
Ga0207664_1000623311	3300025929	Agricultural Soil	MAGRPVRETVTLAGRADRARLARAFVEGVLGPGHPCGDVAALLVSELF
Ga0207664_108619221	3300025929	Agricultural Soil	VARVAVRESVTLAGRAERARAARTFVGEVLGPGHPYGDAAVLLVRDLR
Ga0207664_108943061	3300025929	Agricultural Soil	MTGLAVREIMTLAGQPERARVARAFVAGVLGPGHPCGDDAALLVSELFGNS
Ga0207664_117454711	3300025929	Agricultural Soil	MMARVVVRESVTLAGRAERARAARTFVSEVLGLGHPCGDVAVLLVSEIFGNSVRHS
Ga0207661_114203331	3300025944	Corn Rhizosphere	MTGVTVRESVKVAGLVERVRVVRSFVGAVLGPGHPCGDDAILLAR
Ga0208488_10658172	3300027110	Forest Soil	MARRAVRESVTLAGRAERARAARAFVSEVLGPGQPCGDVAIL
Ga0209113_10637671	3300027517	Forest Soil	MAEAAVRETVTLAGRAEQARLARAFVAGAIGPGHA
Ga0209590_102934061	3300027882	Vadose Zone Soil	MAGRAVRETATLAGQAERARVARAFVAGVLGPGHPCGAD
Ga0209275_105738901	3300027884	Soil	LMGGAAVRESVTLAGLAERARVARAFVGGVLGPGHPCRDAAVLRVS
Ga0209415_111478801	3300027905	Peatlands Soil	MAGPQIRESVTVAGRAERARVARAFVGGVLGPGHPCGADAALLVSELFGNS
Ga0209526_101452844	3300028047	Forest Soil	MTGPTVRESVKVAGLVERVRVVRSFVGAVLGPGHPCGDDAMLLASELFTNSLRHSSSGLPGD
Ga0302219_102925152	3300028747	Palsa	MAEPEIQESVTVAGRAERARIARAFVGGVLGPGHPCGDDAALLVSELFGNSVRH
Ga0302231_104093561	3300028775	Palsa	MAGLAVRESVTLAGRAERARAARAFVSEVLGPGHPCGDVAVLLVSEIFSN
Ga0302225_105058731	3300028780	Palsa	MTGLAVRESVTLAGRAERARVASTFVGAVLGPGHPCGDIAVLLVSDS
Ga0302223_100070321	3300028781	Palsa	IRATVRESVSVAGRTERARVVRAFVGAVLGPGHPCGNDAVLLAIL
Ga0302232_102784403	3300028789	Palsa	MAGLAVRESVTLAGRAERARVARAFVGGVLGPGHPCGDVAGLLVSEIFGNS
Ga0302232_105359861	3300028789	Palsa	MAGTVVRESVTLAGRAERARIARAFVGGVLGPGHPCGDDAALLVS
Ga0302221_105315971	3300028806	Palsa	MIRATVRESVSVAGRTERARVVRAFVGAVLGPGHPCGNDAVLLASELFGNSVR
Ga0302229_104272961	3300028879	Palsa	MAGPQIRESVTVAGRAERAGVARAFAVGVLGPGHPCGDDAALLVSELFGNSVRHS
Ga0302154_101828513	3300028882	Bog	MSRAVVRESVTVAGRAERARVARTFVGAVVGPGHPCGDVAVLLVSELFGNSVQH
Ga0311327_105652473	3300029883	Bog	MSRAVVRESVTVAGRAERARVARTFVGAVVGPGHPCGDVAV
Ga0311369_114802591	3300029910	Palsa	MTGLAVRESVTLAGRAERARVASTFVGAVLGPGHPCGDIAVLLVSDSRQQ
Ga0311340_100033618	3300029943	Palsa	MIRATVRESVSVAGRTERARVVRAFVGAVLGPGHPCGNDAVLLAIL
Ga0311371_125930811	3300029951	Palsa	MARVAVRESVTLAGRAERARAARAFVSAILGPGHPCGDMA
Ga0302190_103110142	3300029988	Bog	MSRAVVRESVTVAGRAERARVARTFVGAVVGPGHPCGDVAVLLVSELFGNSVQHGGSGVANET
Ga0311339_105216742	3300029999	Palsa	MIRATVRESVSVAGRTERARVVRAFVGAVLGPGHPCGNDAVLLA
Ga0302306_101441111	3300030043	Palsa	MVRVAVQESVTLAGRVERARIARAFVGGVLGPEHPCGDDA
Ga0302177_100166451	3300030053	Palsa	MAGTVVRESVTLAGRAERARIARAFVGGVLGPGHPCGDD
Ga0302181_103452082	3300030056	Palsa	MMTGATVRESVKVAGRGERARVVRAFVFAVLGPGHPC
Ga0311353_111548481	3300030399	Palsa	MAGPQIRESVTVAGRAERARIARAFVGGVLGPGHPCGDDAALLVSELFGNSVR
Ga0310037_103823571	3300030494	Peatlands Soil	MAEPKIRETVTVAGRAERARVARAFVGGVLGPGHPCGDDAALLVSELFGN
Ga0311370_118263401	3300030503	Palsa	MTGLAVRESVTLAGRAERARVASTFVGAVLGPGHPCGDIAVLLVSDSRQQRAAQQVGRSR
Ga0311372_128567051	3300030520	Palsa	MAGAAVRESVTLAGRAERARVARAFVTAVLGPGHPCGDAAALLTSELFGNRVGVQP
Ga0311357_103323101	3300030524	Palsa	MAERAVRETVTLAGRAERARLARAFVYGVLGPDDLGGDVA
Ga0311355_102196711	3300030580	Palsa	MAELAVRESVTLAGRTERARVARAFVGGVLGPGHPCGDVAGLLVSEIF
Ga0302311_104815732	3300030739	Palsa	MMTGATVRESVKVAGRGERARVVRAFVFAVLGPGHPCGDDAVL
Ga0265770_11290931	3300030878	Soil	MAGPKIRESVTVAGRAERARVARAFVGGVLGPGHPCGDDAALLVTGCS
Ga0302307_102143261	3300031233	Palsa	MAGLAVRESVTLAGRAERARAARTFVSEVLGPGHP
Ga0302326_104885321	3300031525	Palsa	MTGATVRESVSVAGRGERARVVRAFVGAVLGPGHPCGDDAVLLVSKIF
Ga0302326_112738982	3300031525	Palsa	VAGLVVRESVTLAGVAERAWGAREFVRSVLGTGHLCGDDALL
Ga0307374_105346541	3300031670	Soil	MAGLAVRESVTLAGRAERARAARTFGEVLGPGHPCGDVAVLLV
Ga0307476_107984381	3300031715	Hardwood Forest Soil	MTEATVRETVTLAGRPERARAARAFVSEVLGPGHPCGDVAVLLVSDLQ
Ga0307478_110960361	3300031823	Hardwood Forest Soil	MAGLEVRESVTVAGRAEQARPSAGVLGPGHPCRDDAALLVSELFGNSVRHSR
Ga0306919_108927411	3300031879	Soil	MAGLAVRESVTLAGRAERARAARSFVSEVLGPGHPCVDVAVLLVSEVFGNS
Ga0311301_129894971	3300032160	Peatlands Soil	MTGATVRESLKVAGLVERARVVRAFVGAVLGPEHPC
Ga0311301_130093661	3300032160	Peatlands Soil	MAGPQIRESVTVAGRAERARVARAFVGGVLGPGHPCGADAALLVSELF
Ga0335082_114588511	3300032782	Soil	MTGATVRESVKVAGLAERTRIVRSFVGAVLGPGHPCGDDAVL
Ga0335078_100112366	3300032805	Soil	MAGRVVRETVMLAGRAERARLARAFVEGVLGPGHPCGDVAALLVDELFVNSIRHS
Ga0335078_100615439	3300032805	Soil	MARAAVRESVTLAGRAERARAARAFVSEVLGPGHPCGDVAILLVSEI
Ga0335078_118026882	3300032805	Soil	MGEAAVWERVTVAGRAERARVARTFVGAVLGPAHPCAEVAVLLAGELFGN
Ga0335078_119376341	3300032805	Soil	MARVAVRESVTLAGRAERARAARAFVSEVLGPGHPCGDVAILLV
Ga0335080_111331922	3300032828	Soil	MTGATVRESVRVAGLVERARVVRASVGAVLGPGHPCGDDAALLASELFG
Ga0335074_100702751	3300032895	Soil	MAGRAVRETVTLAGRAERARLARAFVEGVLGPGHPCGDVAVLLVGE
Ga0335074_103106361	3300032895	Soil	MTGETIRESVKVAGLAERTRIVRSFVGAVLGPGHPCEEDAVLLASELFGNSLRHSSSGLPGETVTVTVTACV
Ga0335074_112394731	3300032895	Soil	VMAGVASRDSVTVAGLAGQARVDRAFAGAVLGPGHPCGDD
Ga0335075_104783103	3300032896	Soil	MTGLAVRETVTLAGRPERVRVARQFVGAVLGPGHPCGDAAVL
Ga0335075_109330961	3300032896	Soil	MTGVTVRESVKVAGLVERARLVRAFVGAVLGPGHPCEDDAVLLASELFGNS
Ga0335075_113526611	3300032896	Soil	MARAAVRESVTLAGRAERARAARAFVSEVLGPGHPCADVAILLVSE
Ga0335072_100956695	3300032898	Soil	MARVAVRESVTLAGRAEQARAARTFVGEVLGPGHPCADDAVLLVSDGVGREPRAS
Ga0335083_100506551	3300032954	Soil	MGEAAVWESVTVAGRAERARVARTFVGAVLGPAHPCAEVAVL
Ga0335076_106713493	3300032955	Soil	MAEAAVRESVTPAGRAERARLARRFVGEVLGPGHPGEDVALLLVSELFSNSVPHSRS
Ga0335076_113418181	3300032955	Soil	MARVAVRESVTLAGRAERARAACAFVDAVLGTGHPCGDVADLLV
Ga0335084_102334284	3300033004	Soil	MGEAAVWESVTVAGRAERARVARTFVGAVLGPAHPCAEVAVLLAGE
Ga0335073_116722281	3300033134	Soil	MTGAVRETMTLAGRAERARVARAFVDGVLGPRHPCGDVAALLVS
Ga0335077_113481361	3300033158	Soil	ALMAGLAVRESVTLAGRAERARVARAFVDGVLGLGHPCGDDAAW
Ga0316214_10160151	3300033545	Roots	MAGRAVRETVTLAGRADRARLGRAFVEGLLGPGHPCGDVAALLVGELFSNSLRHSGSGAP
Ga0370514_032716_2_151	3300034199	Untreated Peat Soil	MAGPQIRESVTVAGRAERARAARAFAVGVLGPGHPCEDEAVLPGQGAARR