Metagenome / Metatranscriptome Family F065645

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065645
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	48 residues
Representative Sequence	MTKASTGESPPQPNEQPQPWRRNIYDYDGEYEFPTVRHWTAP
Number of Associated Samples	77
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.35 %
% of genes near scaffold ends (potentially truncated)	55.12 %
% of genes from short scaffolds (< 2000 bps)	73.23 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.906 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.496 % of family members)
Environment Ontology (ENVO)	Unclassified (49.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.843 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13561	adh_short_C2	2.36
PF00196	GerE	2.36
PF00174	Oxidored_molyb	2.36
PF00486	Trans_reg_C	2.36
PF10686	YAcAr	2.36
PF03466	LysR_substrate	2.36
PF03401	TctC	2.36
PF06778	Chlor_dismutase	1.57
PF08240	ADH_N	1.57
PF11391	DUF2798	1.57
PF00589	Phage_integrase	1.57
PF02371	Transposase_20	1.57
PF13302	Acetyltransf_3	1.57
PF09423	PhoD	1.57
PF00226	DnaJ	0.79
PF00561	Abhydrolase_1	0.79
PF00126	HTH_1	0.79
PF13473	Cupredoxin_1	0.79
PF00881	Nitroreductase	0.79
PF07883	Cupin_2	0.79
PF09939	DUF2171	0.79
PF16655	PhoD_N	0.79
PF02656	DUF202	0.79
PF13391	HNH_2	0.79
PF13460	NAD_binding_10	0.79
PF08706	D5_N	0.79
PF00877	NLPC_P60	0.79
PF02668	TauD	0.79
PF00656	Peptidase_C14	0.79
PF00970	FAD_binding_6	0.79
PF16868	NMT1_3	0.79
PF13602	ADH_zinc_N_2	0.79
PF04542	Sigma70_r2	0.79
PF00578	AhpC-TSA	0.79
PF00571	CBS	0.79
PF12680	SnoaL_2	0.79
PF00149	Metallophos	0.79
PF02627	CMD	0.79
PF00106	adh_short	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	2.36
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.36
COG3915	Uncharacterized conserved protein	Function unknown [S]	2.36
COG3253	Coproheme decarboxylase/chlorite dismutase	Coenzyme transport and metabolism [H]	1.57
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.57
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.79
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.79
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.79
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.79
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.79
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.91 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.91 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.91 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.46 %
Unclassified	root	N/A	44.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.54 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.57 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.57 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.57 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Ancalomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ancalomicrobiaceae	0.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.79 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	14.17 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	1.57 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.57 %
Siculibacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ancalomicrobiaceae → Siculibacillus	0.79 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.66 %
Aquabacterium olei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	1.57 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.57 %
Microvirga arabica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arabica	0.79 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	0.79 %
Siculibacillus lacustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ancalomicrobiaceae → Siculibacillus → Siculibacillus lacustris	0.79 %
Bradyrhizobium rifense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	0.79 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.09 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.66 %
Aquabacterium olei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	1.57 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.79 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.79 %
Microvirga arabica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arabica	0.79 %
Candidatus Afipia apatlaquensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	0.79 %
Siculibacillus lacustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ancalomicrobiaceae → Siculibacillus → Siculibacillus lacustris	0.79 %
Bradyrhizobium rifense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	0.79 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.79 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1010403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1501	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10014526	All Organisms → cellular organisms → Bacteria → Proteobacteria	2163	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10038705	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10084958	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300003505\|JGIcombinedJ51221_10007941	Not Available	3345	Open in IMG/M
3300004633\|Ga0066395_10002405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	6489	Open in IMG/M
3300004633\|Ga0066395_10011261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3321	Open in IMG/M
3300004633\|Ga0066395_10987422	Not Available	513	Open in IMG/M
3300005332\|Ga0066388_100005171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9035	Open in IMG/M
3300005332\|Ga0066388_100222958	All Organisms → cellular organisms → Bacteria → Proteobacteria	2515	Open in IMG/M
3300005332\|Ga0066388_100262397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	2368	Open in IMG/M
3300005332\|Ga0066388_102299543	Not Available	975	Open in IMG/M
3300005332\|Ga0066388_105075513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	669	Open in IMG/M
3300005332\|Ga0066388_106740970	Not Available	578	Open in IMG/M
3300005363\|Ga0008090_10070490	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005764\|Ga0066903_100569833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1950	Open in IMG/M
3300005764\|Ga0066903_101952042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis	1126	Open in IMG/M
3300005764\|Ga0066903_101991622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1115	Open in IMG/M
3300005764\|Ga0066903_103304963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	871	Open in IMG/M
3300005764\|Ga0066903_103412005	Not Available	857	Open in IMG/M
3300005764\|Ga0066903_106749613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	597	Open in IMG/M
3300005764\|Ga0066903_107531509	Not Available	561	Open in IMG/M
3300005764\|Ga0066903_108667036	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300006047\|Ga0075024_100043284	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300006047\|Ga0075024_100246225	Not Available	856	Open in IMG/M
3300006057\|Ga0075026_100043765	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300006755\|Ga0079222_11684435	Not Available	607	Open in IMG/M
3300006804\|Ga0079221_10043080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Ancalomicrobiaceae → Siculibacillus → Siculibacillus lacustris	1985	Open in IMG/M
3300006954\|Ga0079219_10827670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	733	Open in IMG/M
3300009792\|Ga0126374_10071671	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300010048\|Ga0126373_10129851	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300010048\|Ga0126373_11970343	Not Available	647	Open in IMG/M
3300010048\|Ga0126373_12918381	Not Available	533	Open in IMG/M
3300010358\|Ga0126370_10025592	All Organisms → cellular organisms → Bacteria	3469	Open in IMG/M
3300010358\|Ga0126370_10028429	Not Available	3330	Open in IMG/M
3300010361\|Ga0126378_11651979	Not Available	728	Open in IMG/M
3300010366\|Ga0126379_13075515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	558	Open in IMG/M
3300010376\|Ga0126381_103923499	Not Available	580	Open in IMG/M
3300010398\|Ga0126383_10008181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7428	Open in IMG/M
3300010398\|Ga0126383_12767577	Not Available	573	Open in IMG/M
3300012211\|Ga0137377_10485879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1173	Open in IMG/M
3300012971\|Ga0126369_10194887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1948	Open in IMG/M
3300016319\|Ga0182033_11158893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	692	Open in IMG/M
3300016341\|Ga0182035_11229230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	669	Open in IMG/M
3300016357\|Ga0182032_11790594	Not Available	537	Open in IMG/M
3300016404\|Ga0182037_10408706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arabica	1120	Open in IMG/M
3300016445\|Ga0182038_12123300	Not Available	509	Open in IMG/M
3300020580\|Ga0210403_10021912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5102	Open in IMG/M
3300020581\|Ga0210399_10074684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2747	Open in IMG/M
3300021560\|Ga0126371_11691959	Not Available	757	Open in IMG/M
3300021560\|Ga0126371_11892930	Not Available	716	Open in IMG/M
3300021560\|Ga0126371_12012989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	695	Open in IMG/M
3300021560\|Ga0126371_12217640	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300025898\|Ga0207692_10603797	Not Available	706	Open in IMG/M
3300026552\|Ga0209577_10305196	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300026845\|Ga0207760_108488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M
3300027548\|Ga0209523_1101721	Not Available	595	Open in IMG/M
3300027680\|Ga0207826_1215278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	516	Open in IMG/M
3300027846\|Ga0209180_10807766	Not Available	502	Open in IMG/M
3300027874\|Ga0209465_10019130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3141	Open in IMG/M
3300027915\|Ga0209069_10226066	Not Available	964	Open in IMG/M
3300031231\|Ga0170824_124766783	Not Available	787	Open in IMG/M
3300031231\|Ga0170824_127510846	Not Available	615	Open in IMG/M
3300031545\|Ga0318541_10093018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1610	Open in IMG/M
3300031545\|Ga0318541_10190328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300031545\|Ga0318541_10254235	Not Available	976	Open in IMG/M
3300031561\|Ga0318528_10053832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2040	Open in IMG/M
3300031573\|Ga0310915_10113066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	1848	Open in IMG/M
3300031681\|Ga0318572_10411794	Not Available	804	Open in IMG/M
3300031718\|Ga0307474_10833277	Not Available	730	Open in IMG/M
3300031719\|Ga0306917_10703307	Not Available	794	Open in IMG/M
3300031719\|Ga0306917_11193744	Not Available	591	Open in IMG/M
3300031724\|Ga0318500_10106807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300031744\|Ga0306918_11221399	Not Available	580	Open in IMG/M
3300031748\|Ga0318492_10215434	Not Available	986	Open in IMG/M
3300031753\|Ga0307477_10076994	All Organisms → cellular organisms → Bacteria → Proteobacteria	2309	Open in IMG/M
3300031754\|Ga0307475_10218455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1525	Open in IMG/M
3300031764\|Ga0318535_10500821	Not Available	540	Open in IMG/M
3300031768\|Ga0318509_10479205	Not Available	696	Open in IMG/M
3300031780\|Ga0318508_1144286	Not Available	674	Open in IMG/M
3300031792\|Ga0318529_10006961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4037	Open in IMG/M
3300031833\|Ga0310917_10008046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5646	Open in IMG/M
3300031833\|Ga0310917_10360926	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300031879\|Ga0306919_10011246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5065	Open in IMG/M
3300031879\|Ga0306919_10067076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → Aquabacterium olei	2433	Open in IMG/M
3300031880\|Ga0318544_10269080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	660	Open in IMG/M
3300031890\|Ga0306925_10253106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1898	Open in IMG/M
3300031890\|Ga0306925_11136335	Not Available	787	Open in IMG/M
3300031897\|Ga0318520_10877468	Not Available	564	Open in IMG/M
3300031910\|Ga0306923_11638166	Not Available	667	Open in IMG/M
3300031912\|Ga0306921_10101819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3329	Open in IMG/M
3300031941\|Ga0310912_10149629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1761	Open in IMG/M
3300031941\|Ga0310912_10897381	Not Available	682	Open in IMG/M
3300031941\|Ga0310912_11248662	Not Available	564	Open in IMG/M
3300031942\|Ga0310916_10811306	Not Available	787	Open in IMG/M
3300031942\|Ga0310916_11011123	Not Available	693	Open in IMG/M
3300031942\|Ga0310916_11085674	Not Available	665	Open in IMG/M
3300031942\|Ga0310916_11592462	Not Available	530	Open in IMG/M
3300031947\|Ga0310909_10131929	All Organisms → cellular organisms → Bacteria → Proteobacteria	2038	Open in IMG/M
3300031954\|Ga0306926_11106685	Not Available	936	Open in IMG/M
3300031981\|Ga0318531_10313040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	709	Open in IMG/M
3300032001\|Ga0306922_10245587	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300032001\|Ga0306922_11228735	Not Available	761	Open in IMG/M
3300032001\|Ga0306922_12156177	Not Available	538	Open in IMG/M
3300032035\|Ga0310911_10172197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium rifense	1225	Open in IMG/M
3300032035\|Ga0310911_10808731	Not Available	542	Open in IMG/M
3300032042\|Ga0318545_10006401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3406	Open in IMG/M
3300032042\|Ga0318545_10371777	Not Available	515	Open in IMG/M
3300032044\|Ga0318558_10026263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2417	Open in IMG/M
3300032044\|Ga0318558_10182890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1018	Open in IMG/M
3300032059\|Ga0318533_10043154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2976	Open in IMG/M
3300032060\|Ga0318505_10483448	Not Available	585	Open in IMG/M
3300032089\|Ga0318525_10073781	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300032094\|Ga0318540_10048748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1895	Open in IMG/M
3300032205\|Ga0307472_100033470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3014	Open in IMG/M
3300032261\|Ga0306920_100060432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5527	Open in IMG/M
3300032261\|Ga0306920_100152683	All Organisms → cellular organisms → Bacteria → Proteobacteria	3441	Open in IMG/M
3300032261\|Ga0306920_100170218	All Organisms → cellular organisms → Bacteria	3247	Open in IMG/M
3300032261\|Ga0306920_100231546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2756	Open in IMG/M
3300032261\|Ga0306920_101976632	Not Available	817	Open in IMG/M
3300032261\|Ga0306920_103740852	Not Available	557	Open in IMG/M
3300033289\|Ga0310914_10531090	Not Available	1063	Open in IMG/M
3300033290\|Ga0318519_10348753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	874	Open in IMG/M
3300033290\|Ga0318519_10736044	Not Available	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.85%
Aquatic	Environmental → Aquatic	3.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.85%
Sediment	Environmental → Aquatic → Sediment	3.15%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.95%
Loam	Environmental → Terrestrial → Soil → Loam	18.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.15%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.15%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10104034	3300000580	Forest Soil	MTKASTGESPPQPNEQPQPWRRNIYDYDGEYEFPTVRHWTA
AF_2010_repII_A1DRAFT_100145265	3300000597	Forest Soil	MTKASTGESPPQPNEQPQPWRRNIYDYDGEYEFPTVRHWTAP
AF_2010_repII_A1DRAFT_100387051	3300000597	Forest Soil	MTESPTRELPPQTNEEPPPRRRNVYDYDGDYEFPTARH
AF_2010_repII_A1DRAFT_100849581	3300000597	Forest Soil	MTKPYTRESPPQPNEQPQPRHRNIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTSE*
JGIcombinedJ51221_100079414	3300003505	Forest Soil	MTKSPPRESLPQPSEQPQPRRRNAYDYDGEYEFPTVQHWTAPLAHPSV*
Ga0066395_100024052	3300004633	Tropical Forest Soil	MTKASTGESPPQPNEQPQPRRRNIYDYDGEYEFPTVRHWTAPGVPEPSK*
Ga0066395_100112615	3300004633	Tropical Forest Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTSE*
Ga0066395_109874221	3300004633	Tropical Forest Soil	MTKLPTRESRPQANEEPPPRHRNIYDYDGEYEFPNAQHWIAAVPASHREDKH*
Ga0066388_1000051716	3300005332	Tropical Forest Soil	MTESPTRQSLPQPNERPQPRRRNIYDYDGEYEFPTAQHWTAPSDPAPSA*
Ga0066388_1002229584	3300005332	Tropical Forest Soil	MTKSPTREAPPQPNEQSQPRHRNIYDYDGEYEFPVVQHWTPPLAHRAE*
Ga0066388_1002623971	3300005332	Tropical Forest Soil	MTKSPTRESRPHANEEPPPRNIYDYDGEYEFPSAQHWTAP
Ga0066388_1022995433	3300005332	Tropical Forest Soil	MAESSTRESPPQRSEQPQPRRRNAYDYDGDYEFPTVQHWTAP
Ga0066388_1050755131	3300005332	Tropical Forest Soil	MTKSPKRESPPQANKEAPPRHRNIYDYDGEYEFPTVQHWTAPDVPAPSA*
Ga0066388_1061405121	3300005332	Tropical Forest Soil	MTKLPTRESPPQPGEQPQPRHRNVYDYDGEYEIPIVQHWTAPKAGIVRSR*
Ga0066388_1067409702	3300005332	Tropical Forest Soil	MTKASTGESPPQPNEQPQPRRRNIYDYDGEYEFPTVRHWTAPSVPEPSE*
Ga0008090_100704901	3300005363	Tropical Rainforest Soil	GESPPQPNEQPQPRRRNIYDYDGEYEIPAVRHWTAPSDPEPSK*
Ga0066903_1005698332	3300005764	Tropical Forest Soil	MMTESPTRQSLPQPNERPQPRRRNIYDYDGEYEFPTAQHWTAPSDPAPSA*
Ga0066903_1019520422	3300005764	Tropical Forest Soil	MTKSPTRESPPRLNEQPQAWHRNAYDYDGEYEFPTTQHWTAPGVPEPSA*
Ga0066903_1019916221	3300005764	Tropical Forest Soil	MTKASTGESPPQPNEQPQPRRRNIYDYDGKYEFPTVR
Ga0066903_1033049632	3300005764	Tropical Forest Soil	MTKASGESPPQPSEQSQPRRRNVYDYDGEYEFPRARHLTAQGVPEPSK*
Ga0066903_1034120052	3300005764	Tropical Forest Soil	MTKLPARESRPQTNEEPPPRHRNIYDYDGEYEFSNAQHWIASVPASHREDKH*
Ga0066903_1067496132	3300005764	Tropical Forest Soil	MTKPNTRESRPLPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPF
Ga0066903_1075315091	3300005764	Tropical Forest Soil	MAKSSTRESPPQRSEQPQPRRRNAYDYDGEYEFPTVQHWTGPVIEHRPRYVGF
Ga0066903_1086670362	3300005764	Tropical Forest Soil	MTEPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTSE*
Ga0075024_1000432842	3300006047	Watersheds	MTKSSTRESSPQPSEQPQPRRRNVYDYDGEYEFPIVQHLTALLTYPPV*
Ga0075024_1002462252	3300006047	Watersheds	MTKSPTRESPPRASEQPQPRRRNAYDYDGEYEFPAAQHWTAPLAH*
Ga0075026_1000437652	3300006057	Watersheds	MTKSSTRESSPQPSEQPQPRRRNVYDYDGEYEFPIVQHLTALLAYPPV*
Ga0079222_116844352	3300006755	Agricultural Soil	MTTSPTRESPAQTNTKLQPHSRNVYDYDGEYEFPTAQHWT
Ga0079221_100430803	3300006804	Agricultural Soil	MTKSPTRESPSQASEQPPPRRRNVYDYHGEYEFPTAQHWAAPPAHPSV*
Ga0079219_108276702	3300006954	Agricultural Soil	MIKSPTRESPLQTNEEPSQRHRNVYDYNGEYEFPTVQHWTAPTRAGQQNRDT*
Ga0126374_100716712	3300009792	Tropical Forest Soil	MTESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTSE*
Ga0126373_101298513	3300010048	Tropical Forest Soil	MTESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTR
Ga0126373_119703432	3300010048	Tropical Forest Soil	MTKSSTRQSPTPQANEEPRPLRRNVYDYDGEYEFLTAQHWTAPD
Ga0126373_129183811	3300010048	Tropical Forest Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVT
Ga0126370_100255927	3300010358	Tropical Forest Soil	MATVTKSPTRESLPHPSEQSQPRHRNVYDYDGEYEFPTVQHWTAPVIRTPSASRPQ*
Ga0126370_100284292	3300010358	Tropical Forest Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWSAPVTRAPFVPRPLFRTSE*
Ga0126378_116519791	3300010361	Tropical Forest Soil	MTKLPTRESRPQANEEPPQRHRNIYDYDGEYEFPNAQHWIAAVPASHREDKH*
Ga0126379_130755151	3300010366	Tropical Forest Soil	MTTVSSTRDSQPQRSEQPQPRRRNIYDYDGEYEFPT
Ga0126381_1039234991	3300010376	Tropical Forest Soil	TKLPTRESRPQANEEPPPRHRNIYDYDGEYEFPNAQHWIAAVPASHREDKH*
Ga0126383_100081819	3300010398	Tropical Forest Soil	MTKASTGESPPQPNEQPQPRRRNIYDDDGEYEFPTVRHWTAPGVFRAVQVMSATPWPKPLPPNYS*
Ga0126383_127675772	3300010398	Tropical Forest Soil	MTKSPTRKSPPQRSEQPQPRYRNVYDYDGEYEFPIVRHWMA
Ga0137377_104858791	3300012211	Vadose Zone Soil	MTESPTRESRPQANEEPPPRYRNIYDYDGEYEFPTVQHWTAADVPTSPE*
Ga0126369_101948871	3300012971	Tropical Forest Soil	MTKSPTRESPPHPSEQPQPRHRNVYDYDGEYEFHTVRHWTAPKAESVRREE*
Ga0182033_111588932	3300016319	Soil	MTKASTGESPRQLNEQPQPRRRNIYDYDGEYEFPTVRHWTAPSVLEPSTPWSKPLPPN
Ga0182035_112292301	3300016341	Soil	MTKASTGESPRQLNEQPQPRRRNIYDYDGEYEFPTVRHWTAPSVLEPSTPW
Ga0182032_117905942	3300016357	Soil	MTKPSTGESPPQPNEQPQPRKNIYDCDGEYEFPTVQHWTA
Ga0182037_104087062	3300016404	Soil	MDLNMTKLPTRESPPQVNEEQPPRHRNVYDYGGEYEFPSAQHWT
Ga0182038_121233001	3300016445	Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTSE
Ga0210403_100219126	3300020580	Soil	MTKSPPRESLPQPSEQPQPRRRNAYDYDGEYEFPTVQHWTAPLAHPSV
Ga0210399_100746846	3300020581	Soil	MTKSPTRESPPRASEQPQPRRRNAYDYDGEYEFPAAQHWTAPLAHQSV
Ga0126371_116919591	3300021560	Tropical Forest Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPR
Ga0126371_118929301	3300021560	Tropical Forest Soil	MTKSPTRESPPHPSEQPQPRHRNVYDYDGEYEFHTVRHWTAPKAESVRREE
Ga0126371_120129891	3300021560	Tropical Forest Soil	MTKASTGESPPQPNEQPQPRRRNMYDYDGEYEFPTARHW
Ga0126371_122176401	3300021560	Tropical Forest Soil	MTESPTRQSLPQPNERPQPRRRNIYDCDGEYEFPTAQHWTAPVI
Ga0126371_128168991	3300021560	Tropical Forest Soil	MAIVTKSPTRESLPHPSERSQPRHRNVYDCDGEYEFHTARHWTAPAVGPVRRDE
Ga0207692_106037972	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTKSPTRESPSEPNEQSQHRNIYDYDGEYEFPIVQHWTAQGIPVPSPV
Ga0209577_103051961	3300026552	Soil	MTELLTSESPPQRSEQPQPLHRNVYDQDGEYEFPIARHWIV
Ga0207760_1084883	3300026845	Tropical Forest Soil	MTKSSTRESPPQRSQQPRPRRNVYDYDGEYEFPTVQHWTATVIRAPSASRPL
Ga0209523_11017212	3300027548	Forest Soil	MTKSPTRESPSQASEQSQPRRRNVYDYDGEYEFPTARHWTALLAHRS
Ga0207826_12152781	3300027680	Tropical Forest Soil	MTRASTGESPRQLNEQPQPRRRNIYDYDGEYEFPTVRHWTAPSVPE
Ga0209180_108077661	3300027846	Vadose Zone Soil	MTKSPTRESPPQANEEPPPRHRNIYAYDGEYEFPTVQHWTPDFAGRR
Ga0209465_100191304	3300027874	Tropical Forest Soil	MATVTKSPTRESLPHPSEQSQPRHRNVYDYDGEYEFPTVQHWTAPVIRTPSASRPQ
Ga0209069_102260662	3300027915	Watersheds	MTKSSTRESSPQPSEQPQPRRRNVYDYDGEYEFPIVQHLTALLTYPPV
Ga0170824_1247667831	3300031231	Forest Soil	MTESPTRESRPQANEEPPPRHRNIYDYDGEYEFPTVQHWTA
Ga0170824_1275108461	3300031231	Forest Soil	MTKSPTRAAPQSNEEAPSRHRNIYDYDGEYELPTVQHWTDRVSST
Ga0318541_100930183	3300031545	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDGEYEFPAVRHWTTPG
Ga0318541_101903281	3300031545	Soil	KNPTSESQPQPSEQPQPRRRSVYDYHDEYEFHTERHWTAPAAGPVRHDE
Ga0318541_102542352	3300031545	Soil	MTKASTGESPRQLNEQPQPRRRNIYDYDGEYEFPTVRHWTAPSVLEPSTPWSKPLPPNYS
Ga0318528_100538322	3300031561	Soil	MTRASTGESLPQPNEQPQPRRRNMYDYDGEYEFPTARHWTAPGVTEPSK
Ga0310915_101130664	3300031573	Soil	MKKNPTRESQRPQPSEQPQPRRRCVYDYHDEYEFHTERHWTAPAAGPVRHDE
Ga0318572_104117942	3300031681	Soil	MAKSSTRESPPQRSEQPQPRRRNAYDYDGEYEFPTVQH
Ga0307474_108332772	3300031718	Hardwood Forest Soil	MTKSPTRESPSEPNEQSQHRNIYDYDGEYEFPIVQHWTARGTPVPSPVM
Ga0306917_107033072	3300031719	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGESEFPTVQHWTAT
Ga0306917_111937443	3300031719	Soil	MSKPSTGESPPQANEQPQPRRNIYDCDGEYEFPTVQHW
Ga0318500_101068073	3300031724	Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTA
Ga0306918_112213991	3300031744	Soil	MAKSSTRESPPQRSEQPQPRRRNAYDYDGEYEFPTVQHWTAPVIRAP
Ga0318492_102154343	3300031748	Soil	MTKSSTRQSPTPQANEEPRPLRRNVYDYDGEYEFLTAHHW
Ga0307477_100769943	3300031753	Hardwood Forest Soil	MTKSPTRESPPRASEQPQPRRRNAYDYDGEYEFPAARHWTAPLAHQSV
Ga0307475_102184553	3300031754	Hardwood Forest Soil	MTKSPTRESLPQPSEQPQPRRRNAYDYDGEYEFPTVRHWTAPLAYPSV
Ga0318535_105008212	3300031764	Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFV
Ga0318509_104792051	3300031768	Soil	MTKSPTRESPSQPNEQSQHRNIYDYDGEYEFPIVQHWTAQGIPVPR
Ga0318508_11442861	3300031780	Soil	MNKPSTGESPPQPNEQPQPRRRNIYDCDGEYEFPTAQHWTAPVIRALSA
Ga0318529_100069612	3300031792	Soil	MTRASTGESPPQPNEQPQPRRRNMYDYDGEYEFPTARHWTAPGVTEPSK
Ga0310917_100080466	3300031833	Soil	MNKPSTGESPPQPNEQPQPRRRNIYDCDGEYEFPTAQHWTAPVIRALSALRPL
Ga0310917_103609261	3300031833	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGESEFPTVQHWTATVIRAP
Ga0306919_100112467	3300031879	Soil	MSKSSTRESPPQPNEQSQPRHRNIYDYDGEYEFPTVQHWTAPVIPRHVRFDSQ
Ga0306919_100670765	3300031879	Soil	MKKNPTRESQRPQPSEQPQPRRRSVYDYHDEYEFHTERHWTAPAAGPVRHDE
Ga0318544_102690801	3300031880	Soil	MTRASTGESPPQPNEQPQPRRRNMYDYDGEYEFPTARHWTAPGVPEPSK
Ga0306925_102531062	3300031890	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGESEFPTVQHWTATVIRAPSGQDEIRNGD
Ga0306925_111363351	3300031890	Soil	MTKLPTRESPPQPGEQPQPRHRNVYDYDGEYEFPIVQHWTAPKAGIVRSR
Ga0318520_108774681	3300031897	Soil	MAKSSTRESPPQRSEQPQPRRRNAYDYDGEYEFPTVQHW
Ga0306923_116381662	3300031910	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDGEYEFPAVR
Ga0306921_101018193	3300031912	Soil	MATVIKSPTRESLPHPSEQSQPRHRNVYDYDGEYEFPTVQHWTAPVIQTPSASRPQ
Ga0306921_106313591	3300031912	Soil	MTTVLLTRESPPQPNEQPQPRHRNAYDYDGEYEFAIAQHWTTP
Ga0310912_101496291	3300031941	Soil	MTKSPTRESPSQPNEQSQHRNIYDYDGEYEFPIVQH
Ga0310912_108973811	3300031941	Soil	MTKPSTVESPPQPNEQPQPRRRNIYDCDGEYEFPT
Ga0310912_112486622	3300031941	Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTS
Ga0310916_108113062	3300031942	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGESEFPTVQHW
Ga0310916_110111231	3300031942	Soil	MTKPSTDESPPQPNEQPQPRRRNIYDCDGEYEFPTVQHWTATV
Ga0310916_110856742	3300031942	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDSEYEFPAVRHWTTPGVP
Ga0310916_115924622	3300031942	Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPV
Ga0310909_101319292	3300031947	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDSEYEFPAVRHWTTPGVPWPKPLPPNYS
Ga0306926_111066853	3300031954	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGEYEFPTVQHWTATVIRAPS
Ga0318531_103130401	3300031981	Soil	MTRASTGESLPQPNEQPQPRRRNMYDYDGEYEFPTARHWTAPGVPE
Ga0306922_102455872	3300032001	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDGEYEFPAVRHWTTPGVPWPKPLPPNYS
Ga0306922_112287351	3300032001	Soil	MTKPSTGESPPQPNEQPQPRRRNIYDCDGEYEFPTVQHWTATVIRAPSA
Ga0306922_121561771	3300032001	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGEYEFPTVQHWTATVIRAPSGQDKIRNGD
Ga0310911_101721973	3300032035	Soil	MTKLPTRESPPQPGEQPQPRHRNVYDYDGEYEFPIVQHWTAPKAGIVRS
Ga0310911_108087311	3300032035	Soil	MAKSSTRESPPQRSEQPQPRRRNAYDYDGEYEFPTVQHWTTP
Ga0318545_100064012	3300032042	Soil	MTESPTRQSLPQPNERPQPRRRNIYDYDGEYEFPTAQHWTAPSDPAPSA
Ga0318545_103717771	3300032042	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDGEYEFPAVRHWTTPGVPWPKPLPP
Ga0318558_100262631	3300032044	Soil	MTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRT
Ga0318558_101828903	3300032044	Soil	MTRASTGESPPQPNEQPQPRRRNMYDYDGEYEFPTARHWTAPGV
Ga0318533_100431545	3300032059	Soil	MTMPSTGESPPQPNEQPQPRRRNIYDCDGESEFPTVQHWTATVIRAPSGQDKIRNGD
Ga0318505_104834481	3300032060	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDGEYEFPAVRHWTTPGVPW
Ga0318525_100737811	3300032089	Soil	TMTKPYTRESPPQPNEQPQPRHRSIYDYDGDYEFPTVQHWTAPVTRAPFVPRPLFRTSE
Ga0318540_100487482	3300032094	Soil	MTRASTGESPRQLNEQPQPRRRNIYDYDGEYEFPTVRHWTAPSVLEPSTPWSKPLPPNYS
Ga0307472_1000334705	3300032205	Hardwood Forest Soil	MTKSQTRESPPRASEQPQPRRRNAYDYDGEYEFPAAQHWTAPLAHQSV
Ga0306920_1000604327	3300032261	Soil	MTKTPTRESPPQPSEQPQPRCRNVYDYDGEYEFPTVQHWTAPLPHRAD
Ga0306920_1001526832	3300032261	Soil	MTKASTGESPPHPNEQPQPRRRNIYDYDGKYEFPTVRHWTAPGVFRAVQVMSATPWPKPLPPNYS
Ga0306920_1001702181	3300032261	Soil	MTKESPPQPNEQPQPQRRNTYDYDGEYEFPTVRHWTAPGVPEPSK
Ga0306920_1002315466	3300032261	Soil	MTKASTGESPPQPNEQSQPRRRNIYDYEGKYEFPTVRHRTAPGVFRAVQVMSATPWPKPLPPNYS
Ga0306920_1019766321	3300032261	Soil	MSKPSTGESPPQANEQPQPRRNIYDCDGEYEFPTVQHWTATVIRAP
Ga0306920_1037408521	3300032261	Soil	MTKPSTDESPPQPNEQPQPRRRNIYDCDGEYEFPTVQHWTATVI
Ga0310914_105310901	3300033289	Soil	MELNMTKSSTRQSPTPQANEEPRPRHRNVYDYDGEYEFLTAQHWTAP
Ga0318519_103487531	3300033290	Soil	MTRASTGESLPQPNEQPQPRRRNMYDYDGEYEFPTARH
Ga0318519_107360441	3300033290	Soil	MTKASTGESPPQPNEQPQPQRRNIYDYDGEYEFPAVRHWTTPGVPWPKPLPPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065645

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences