Metagenome / Metatranscriptome Family F065580

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065580
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	55 residues
Representative Sequence	VEEKEIIEKRTVRREEPLGKTTNVNVGPDGTTNVQESGDEVVEEEHVVEEHRHP
Number of Associated Samples	96
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.16 %
% of genes near scaffold ends (potentially truncated)	23.62 %
% of genes from short scaffolds (< 2000 bps)	74.02 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.913 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.347 % of family members)
Environment Ontology (ENVO)	Unclassified (45.669 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.354 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 24.39% Coil/Unstructured: 75.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF13777	Obsolete Pfam Family	25.98
PF01037	AsnC_trans_reg	21.26
PF09852	DUF2079	10.24
PF00483	NTP_transferase	4.72
PF00355	Rieske	2.36
PF01458	SUFBD	0.79
PF14378	PAP2_3	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.91 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.46 %
Unclassified	root	N/A	7.09 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	81.10 %
Unclassified	root	N/A	7.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.36 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	35.43 %
Unclassified	root	N/A	7.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	35.43 %
Unclassified	root	N/A	7.09 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402GXBYJ	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	509	Open in IMG/M
3300000956\|JGI10216J12902_110287918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1028	Open in IMG/M
3300001536\|A1565W1_11151203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1329	Open in IMG/M
3300002908\|JGI25382J43887_10445969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	548	Open in IMG/M
3300005093\|Ga0062594_101773686	Not Available	648	Open in IMG/M
3300005166\|Ga0066674_10016838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3109	Open in IMG/M
3300005166\|Ga0066674_10324928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300005167\|Ga0066672_10312419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1023	Open in IMG/M
3300005171\|Ga0066677_10813797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300005172\|Ga0066683_10621025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300005172\|Ga0066683_10737950	Not Available	579	Open in IMG/M
3300005174\|Ga0066680_10282309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1058	Open in IMG/M
3300005175\|Ga0066673_10237154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1053	Open in IMG/M
3300005328\|Ga0070676_10956403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300005345\|Ga0070692_11046839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300005446\|Ga0066686_10080195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2065	Open in IMG/M
3300005446\|Ga0066686_10157442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1505	Open in IMG/M
3300005545\|Ga0070695_100317927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1156	Open in IMG/M
3300005546\|Ga0070696_101343316	Not Available	608	Open in IMG/M
3300005553\|Ga0066695_10046798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2560	Open in IMG/M
3300005553\|Ga0066695_10235138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1155	Open in IMG/M
3300005558\|Ga0066698_10596931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	745	Open in IMG/M
3300005558\|Ga0066698_10674711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300005558\|Ga0066698_10888270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	571	Open in IMG/M
3300005559\|Ga0066700_10887383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	594	Open in IMG/M
3300005566\|Ga0066693_10213594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	754	Open in IMG/M
3300005568\|Ga0066703_10031517	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300005568\|Ga0066703_10132136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1491	Open in IMG/M
3300005569\|Ga0066705_10246021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1133	Open in IMG/M
3300005576\|Ga0066708_10214402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1213	Open in IMG/M
3300005586\|Ga0066691_10051917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2200	Open in IMG/M
3300006031\|Ga0066651_10569614	Not Available	601	Open in IMG/M
3300006034\|Ga0066656_11056498	Not Available	522	Open in IMG/M
3300006797\|Ga0066659_10299385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1227	Open in IMG/M
3300009012\|Ga0066710_100131735	All Organisms → cellular organisms → Bacteria	3433	Open in IMG/M
3300009012\|Ga0066710_100471606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1886	Open in IMG/M
3300009012\|Ga0066710_102887138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300009012\|Ga0066710_103052419	Not Available	650	Open in IMG/M
3300009012\|Ga0066710_103133185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300009090\|Ga0099827_10552702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	991	Open in IMG/M
3300009137\|Ga0066709_100132642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3143	Open in IMG/M
3300009137\|Ga0066709_100198344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2634	Open in IMG/M
3300010333\|Ga0134080_10159717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	959	Open in IMG/M
3300010373\|Ga0134128_10794947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1049	Open in IMG/M
3300010396\|Ga0134126_11757581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	680	Open in IMG/M
3300012198\|Ga0137364_10141916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1729	Open in IMG/M
3300012198\|Ga0137364_10519368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	896	Open in IMG/M
3300012200\|Ga0137382_10013231	All Organisms → cellular organisms → Bacteria	4496	Open in IMG/M
3300012203\|Ga0137399_10007191	All Organisms → cellular organisms → Bacteria	6345	Open in IMG/M
3300012204\|Ga0137374_10442600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1022	Open in IMG/M
3300012206\|Ga0137380_10009837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8677	Open in IMG/M
3300012207\|Ga0137381_10011188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6862	Open in IMG/M
3300012208\|Ga0137376_10084134	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300012208\|Ga0137376_10974110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	727	Open in IMG/M
3300012208\|Ga0137376_11013348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	711	Open in IMG/M
3300012208\|Ga0137376_11087978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	684	Open in IMG/M
3300012209\|Ga0137379_10043050	All Organisms → cellular organisms → Bacteria	4356	Open in IMG/M
3300012359\|Ga0137385_10068129	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300012927\|Ga0137416_11100543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300014154\|Ga0134075_10531448	Not Available	529	Open in IMG/M
3300014157\|Ga0134078_10523254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	555	Open in IMG/M
3300015359\|Ga0134085_10496381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	558	Open in IMG/M
3300017654\|Ga0134069_1076138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1077	Open in IMG/M
3300017654\|Ga0134069_1108518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300017657\|Ga0134074_1269261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	616	Open in IMG/M
3300018027\|Ga0184605_10008414	All Organisms → cellular organisms → Bacteria	3861	Open in IMG/M
3300018027\|Ga0184605_10023127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2514	Open in IMG/M
3300018027\|Ga0184605_10053735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1718	Open in IMG/M
3300018027\|Ga0184605_10089037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1353	Open in IMG/M
3300018027\|Ga0184605_10331028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	688	Open in IMG/M
3300018028\|Ga0184608_10000774	All Organisms → cellular organisms → Bacteria	8830	Open in IMG/M
3300018054\|Ga0184621_10032536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1673	Open in IMG/M
3300018061\|Ga0184619_10039121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2031	Open in IMG/M
3300018076\|Ga0184609_10295196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	758	Open in IMG/M
3300018431\|Ga0066655_10005647	All Organisms → cellular organisms → Bacteria	5104	Open in IMG/M
3300018433\|Ga0066667_10711720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	844	Open in IMG/M
3300018468\|Ga0066662_10650484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	996	Open in IMG/M
3300018482\|Ga0066669_10305567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1294	Open in IMG/M
3300019279\|Ga0184642_1379828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	521	Open in IMG/M
3300019885\|Ga0193747_1001310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6870	Open in IMG/M
3300019885\|Ga0193747_1059056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	950	Open in IMG/M
3300020004\|Ga0193755_1055599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1289	Open in IMG/M
3300020006\|Ga0193735_1036356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1495	Open in IMG/M
3300021080\|Ga0210382_10013301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2852	Open in IMG/M
3300021344\|Ga0193719_10096300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1286	Open in IMG/M
3300022534\|Ga0224452_1160829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	691	Open in IMG/M
3300022756\|Ga0222622_10469802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	895	Open in IMG/M
3300022756\|Ga0222622_10483535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	883	Open in IMG/M
3300023058\|Ga0193714_1010197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1436	Open in IMG/M
3300025981\|Ga0207640_10153621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1694	Open in IMG/M
3300026297\|Ga0209237_1020349	All Organisms → cellular organisms → Bacteria	3794	Open in IMG/M
3300026300\|Ga0209027_1044131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1677	Open in IMG/M
3300026300\|Ga0209027_1081181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1192	Open in IMG/M
3300026301\|Ga0209238_1104673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	955	Open in IMG/M
3300026307\|Ga0209469_1056879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1216	Open in IMG/M
3300026310\|Ga0209239_1289343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	565	Open in IMG/M
3300026318\|Ga0209471_1213734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	720	Open in IMG/M
3300026327\|Ga0209266_1045735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2191	Open in IMG/M
3300026327\|Ga0209266_1294339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300026523\|Ga0209808_1024258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2977	Open in IMG/M
3300026529\|Ga0209806_1032103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2599	Open in IMG/M
3300026530\|Ga0209807_1119809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1081	Open in IMG/M
3300026536\|Ga0209058_1215944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	750	Open in IMG/M
3300026537\|Ga0209157_1030958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3096	Open in IMG/M
3300026538\|Ga0209056_10168116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1650	Open in IMG/M
3300026548\|Ga0209161_10224820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1010	Open in IMG/M
3300028536\|Ga0137415_11141843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	593	Open in IMG/M
3300028711\|Ga0307293_10010478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2587	Open in IMG/M
3300028715\|Ga0307313_10076271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1005	Open in IMG/M
3300028771\|Ga0307320_10468321	Not Available	509	Open in IMG/M
3300028784\|Ga0307282_10283508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	798	Open in IMG/M
3300028784\|Ga0307282_10669037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	503	Open in IMG/M
3300028814\|Ga0307302_10080004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1547	Open in IMG/M
3300028814\|Ga0307302_10634920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	531	Open in IMG/M
3300028814\|Ga0307302_10706677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	501	Open in IMG/M
3300028828\|Ga0307312_10378076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	928	Open in IMG/M
3300028828\|Ga0307312_10963936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300028875\|Ga0307289_10492255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	504	Open in IMG/M
3300028878\|Ga0307278_10204712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	880	Open in IMG/M
3300028881\|Ga0307277_10004579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5307	Open in IMG/M
3300028881\|Ga0307277_10184471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	912	Open in IMG/M
3300028884\|Ga0307308_10009764	All Organisms → cellular organisms → Bacteria	4238	Open in IMG/M
3300028885\|Ga0307304_10017017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2400	Open in IMG/M
3300031058\|Ga0308189_10207226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	714	Open in IMG/M
3300031058\|Ga0308189_10365956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300031720\|Ga0307469_10074264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2270	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.43%
Host-Associated	Host-Associated	1.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.40%
Aquatic	Environmental → Aquatic	11.02%
Plants	Host-Associated → Plants	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.40%
Sediment	Environmental → Aquatic → Sediment	9.45%
Freshwater	Environmental → Aquatic → Freshwater	1.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.45%
Loam	Environmental → Terrestrial → Soil → Loam	3.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_09545240	2070309009	Soil	VEEKEVIEKRTIRREEPLDKVTNVNVGPDGTTNVQESGDEVVEEEHVVEERRHP
JGI10216J12902_1102879183	3300000956	Soil	MEEKEVIEKRTIRREEPTKKVTNVNVGPDGTTNVQQSGDEVVEEEHV
A1565W1_111512032	3300001536	Permafrost	MDEKEVTVEKRTTVVGQEPVDKTTNVSVGPDGTTNIQESGQDPVVEEEHVVEEHRHP*
JGI25382J43887_104459692	3300002908	Grasslands Soil	EKRTIRREEPTKKVTNVNVGPDGTTNMQQTDDEVVEEEHLIERHEHQP*
Ga0062594_1017736861	3300005093	Soil	IIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVEEHRNP*
Ga0066674_100168384	3300005166	Soil	MEEHEVVEKRTVRRKEPIDRVTNVNVAPDGTTNVQESGSEVIEEEHVVEEHEHQHP*
Ga0066674_103249282	3300005166	Soil	MEEKEVIEKRTIRREEPTKKVTNVNVGPDGTTNVQQTDDEVVEEEHVIERHEHRP*
Ga0066672_103124192	3300005167	Soil	MEEHEVVEKRTVRRKEPIDKVTNVNVAPDGTTNVQESGSEVVEEEHVVEEHEHKHP*
Ga0066677_108137971	3300005171	Soil	VEEKEVIEKRTIRREEPVNKVTNVNVGPDGTTNVQRGDEVVEEERVVEEHEHKHP*
Ga0066683_106210251	3300005172	Soil	VEEKEIIEKRTVRREDPLGKITNVNVGPDGTTNVQQSGGEVVEEEHIVEEHRHP*
Ga0066683_107379501	3300005172	Soil	VEEKEIIEKRTVRREEPLDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERER
Ga0066680_102823091	3300005174	Soil	MEEHEVVEKRTVRRKEPIDKVTNVNVAPDGTTNVQESGSEVVEEEHVVEEHEH
Ga0066673_102371542	3300005175	Soil	VEEKEIIEKRTVRRDEPLDKTTNVNVGPDGTTNVEESGDAVVEEEHVVEEHRHP*
Ga0070676_109564031	3300005328	Miscanthus Rhizosphere	RSPKEGVAVEEKTIIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVEEHRNP*
Ga0070692_110468392	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FAGRSPKEGVAVEEKTIIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVEEHRNP*
Ga0066686_100801952	3300005446	Soil	VEEKEVIEKRTVRREEPLGKVTNINVAPDGTTNVQESGDAVVEEEHVVEERQHRHP*
Ga0066686_101574423	3300005446	Soil	VEEKEIIEKRTVRREEPLHKVTNINVGPDGTTNVQESGDEVVEEEHVVEEHEHRHP*
Ga0070695_1003179272	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VEEKTIIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVEEHRNP*
Ga0070696_1013433162	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VEEKEVTVDKRTTVRREDPVGKTTNVNIGPDGTTNVQESGDDAVVEEEHVVEERRNP*
Ga0066695_100467983	3300005553	Soil	VEEKEIIEKRTVRREDPLGKITNVNVGPDGTTNVQQSGGEVVEEEHSVAEHRHP*
Ga0066695_102351383	3300005553	Soil	VEEKEIIEKRTVRREEPLDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERERQP*
Ga0066698_105969311	3300005558	Soil	VEEKEVIEKRTVRREDPLGKTTNVNVGPDGTTNVQQSGDEVVEEEHIVEEHRHP*
Ga0066698_106747112	3300005558	Soil	AVEEKEIIEKRTVRREEPLHKVTNINVGPDGTTNVQESGDEVVEEEHVVEEHEHRRP*
Ga0066698_108882701	3300005558	Soil	RLAVEEKEVIVKRTVRREEPLNKVTNINVAPDGTTNVQQSGDEVVEEEHVVEEREHRHP*
Ga0066700_108873833	3300005559	Soil	IEKHTIRREEPVKKVTNVNVGPDGTTNVQTSADEVVEEEHVVEEHEHKQP*
Ga0066693_102135941	3300005566	Soil	VEKRTVRREEPVNKVTSVNVGPDGTTNVQESGDEVVEEEHVVEEHRHP*
Ga0066703_100315172	3300005568	Soil	VEEKEIIEKRTVRRGEPDDKVTNINVGPDGTTNVQESGSEVVEEEHVVEEHEHRRP*
Ga0066703_101321362	3300005568	Soil	VEEKEVTIEKRTSVRREEPLGKTTNVNIAPDGTTNIQESGGDPVVEEERVVEEHHHQP*
Ga0066705_102460214	3300005569	Soil	VEEKEVVEKRTVRREEPLGTTTNVNVGPDGTTDVQKSGDEVVEEEHVVEEHRHP*
Ga0066708_102144022	3300005576	Soil	MEEHEVVEKRTVRRKEPIDKVTNVNVAPDGTTNVQESGSEVIEEEHVVEEHEHQHP*
Ga0066691_100519172	3300005586	Soil	VEEKEVTIEKRTSVRRAAPLGKTTNVNIAPDGTTNVQESGGDPVVEEEHVVEEHHHQP*
Ga0066651_105696141	3300006031	Soil	MEEHEVVEKRTVRRKEPIDRVTNVNVAPDGTTNVQESGSEVIEEEHVVEEHEH
Ga0066656_110564982	3300006034	Soil	VEEKEIIEKRTVRREDPLGKITNVNVGPDGTTNVQQSGGEVVEEEHIVE
Ga0066659_102993851	3300006797	Soil	IEKRTIRREEPVNKVTNVNIGPDGTTNVQESGDEVVEEERVVEEHEHKHP*
Ga0066710_1001317355	3300009012	Grasslands Soil	VEEKEIIEKRTVRREDPLGKITNVNVGPDGTTNVQQSGGEVVEEEHIIEEHRHP
Ga0066710_1004716062	3300009012	Grasslands Soil	VEEKEVIVKRTVRREEPLNKVTNINVAPDGTTNVQQSGDEVVEEEHVVEEREHRHP
Ga0066710_1028871382	3300009012	Grasslands Soil	VEEKEIVEKRTVRREDPLDKVTNINIAPDGTTNVQESGDEVVEEEHVVEEREHRHP
Ga0066710_1030524191	3300009012	Grasslands Soil	VEEKEIIEKRTVRREDPLGKTTNINVGPDGTTNVQESGDEEVVEEEHIVEEHRHP
Ga0066710_1031331852	3300009012	Grasslands Soil	VEEKEVVEKRTVRRDEPIDKTTNVNVGPSGTTNVQESATEVAEEEHVIQEHEHRHT
Ga0099827_105527021	3300009090	Vadose Zone Soil	VEEKEVIEKRTVRREEPLGETTNINVGPDGTTNVQQSGDEVVEEEHVVEEHRHP*
Ga0066709_1001326422	3300009137	Grasslands Soil	LNKPKGAAVEEKEIIEKRTVRREEPLHKVTNINVGPDGTTNVQESGDEVVEEEHVVEEHEHRRP*
Ga0066709_1001983442	3300009137	Grasslands Soil	VEEKEVVEKRTVRRDELIDKTTNVNVGPDGRTNVQESGTEVVEEEHVIEEHEHRHP*
Ga0134080_101597172	3300010333	Grasslands Soil	MEEHEVVEKRTVRRKEPIDRVTNVNVAPDGTTNVQESGSEVVEEEHVVEEHEHKHP*
Ga0134128_107949472	3300010373	Terrestrial Soil	VEEKTIIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVEERRNP*
Ga0134126_117575812	3300010396	Terrestrial Soil	VEEKTIIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVET*
Ga0120134_10508272	3300012004	Permafrost	TEGGPPMDEKEVTVEKRTTVVGQEPVDKTTNVSVGPDGTTNIQESGQDPVVEEEHVVEEHRHP*
Ga0137364_101419162	3300012198	Vadose Zone Soil	VQEKEVVEKRTVRREEPLGKVTNVNVGPDGTTNVQESGDEVVEEEHVVEEREHRHP*
Ga0137364_105193682	3300012198	Vadose Zone Soil	VEEKEVIEKRTIRREEPVNKVTNVNVGPDGTTNVQTSGDEVVEEEHVVEEREHKHP*
Ga0137382_100132315	3300012200	Vadose Zone Soil	VEEKEIIEKRTVRREEPLGTTTNVNVGPDGTTNVQKSGDEVVEEEHVVEEHRHP*
Ga0137399_100071916	3300012203	Vadose Zone Soil	VEEKEIIEKRTIRREEPLGTTTNVNVGPDGTTNIQKSGDTVVEEEHVVEEHEHQP*
Ga0137374_104426002	3300012204	Vadose Zone Soil	VAEKEIVEKRTVRREEPLNKVTNINIAPDGTTNVQESGDEVVEEEHVVEEREHRHP*
Ga0137380_100098376	3300012206	Vadose Zone Soil	VEEKEIIEKRTVRREEPVDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERERQP*
Ga0137381_100111886	3300012207	Vadose Zone Soil	VEEKEIIEKQTVRHEEPLDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERERQP*
Ga0137376_100841343	3300012208	Vadose Zone Soil	VEEKEVIEKRTIRREEPANKVTNVNVGPDGTTNVQTSGDEVVEEEHVVEEREHKHP*
Ga0137376_109741102	3300012208	Vadose Zone Soil	VEEKEVIEKRTVRRNEPLGKTTNVNVGPDGTTNVQQSSDEVVEEEHVVEEHRHP*
Ga0137376_110133483	3300012208	Vadose Zone Soil	SAVEEKEIIEKRTVRREEPLGTTTNVNVGPDGTTNVQKSGDEVVEEEHVVEEHRHP*
Ga0137376_110879781	3300012208	Vadose Zone Soil	IEKRTIRREEPLGTTTNVNVGPDGTTNIQKSGDTVVEEEHVVEEHEHQP*
Ga0137379_100430505	3300012209	Vadose Zone Soil	VEEHEVVEKRTVRREGPIDKTTNVNVGPDGTTNVQESGSEVVEEEHVVEEHEHQHP*
Ga0137385_100681294	3300012359	Vadose Zone Soil	VEEKEIIEKRTVRREEPVDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERERQ
Ga0137416_111005431	3300012927	Vadose Zone Soil	VEEKEVTVEKRTSVRREEPLGKTTNVNIAPDGTTNIQESGGDPVIEEEHVVEEHHHQP*
Ga0134075_105314482	3300014154	Grasslands Soil	LNKPKGAAVEEKEIVEKRTVRREDPLHKVTNINVGPDGTTNVQESGDEVVEEEHVVEEHEHRRP*
Ga0134078_105232543	3300014157	Grasslands Soil	TVRREEPLGKTTNINVGPDGTTNVQESGDEVVEEERVVEEHRHP*
Ga0134085_104963813	3300015359	Grasslands Soil	RRPPNERRRPAVEEKEIIEKRTVRREDPLGKITNVNVGPDGTTNVQQSGGEVVEEEHIVEEHRHP*
Ga0134069_10761382	3300017654	Grasslands Soil	VEEKEIIEKRTVRREEPLDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERERQP
Ga0134069_11085182	3300017654	Grasslands Soil	MEEHEVVEKRTVRRKEPIDKVTNVNVAPDGTTNVQESGSEVVEEEHVVEEHEHP
Ga0134074_12692612	3300017657	Grasslands Soil	VEEKEVIEKRTVRREEPLDKVTNVNVGPDGTTNVQVSGDTVVEEEHVVEERERQP
Ga0184605_100084144	3300018027	Groundwater Sediment	VEEKEVIEKRTVRREEPVNKVTSVNIGADGTTNVQESGDEVVEEEHIVVEEHRRP
Ga0184605_100231275	3300018027	Groundwater Sediment	VEEKEVIEKRTIRRDEPVNKVTNVNVGPDGTTNVQTSGDEVVEEEHVVEEREHKHP
Ga0184605_100537354	3300018027	Groundwater Sediment	VEEKEVIEKRTVRREEPVNKVTSVNIGADGTTNVQESGDEVVEEEHVVEEHQKP
Ga0184605_100890373	3300018027	Groundwater Sediment	VEEKEVIEKRTVRLEQPVNKVTSVNIGADGTTNAQESGDEVVEEEHVIEEHRHP
Ga0184605_103310282	3300018027	Groundwater Sediment	VEEKEVIEKRTVRRVEPLEKTTNVNVGPDGTTNVQESGDEVVEEEHVVEEHRRP
Ga0184608_100007746	3300018028	Groundwater Sediment	VEEKEIIEKRTVRREEPLGKTTNVNVGPDGTTNVQQSGDEVVEEEHVVEEHRHP
Ga0184621_100325364	3300018054	Groundwater Sediment	VEEKEIIEKRTVRREEPLGKTTNVNVGPDGTTNVQQSGDEVVEEERIVEEHRHP
Ga0184619_100391212	3300018061	Groundwater Sediment	VEDKEVIEKRTIRREEPGNKVTNVNVGPDGTTNVQTSGDEVVEEEHVVEKHEHKRP
Ga0184609_102951961	3300018076	Groundwater Sediment	VEEKEVIEKRTVRREEPLGKTTNVDVGPDGTTNVQESGDEVVEEEHVIEEHRHP
Ga0066655_100056475	3300018431	Grasslands Soil	MEEHEVVEKRTVRRKEPIDKVTNVNVAPDGTTNVQESGSEVVEEEHVVEEHEHKHP
Ga0066667_107117202	3300018433	Grasslands Soil	VEEKEIIEKRTVRREDPLGKTTNVNVGPDGTTNVQQSGDEVVEEEHIVEEHRHP
Ga0066662_106504842	3300018468	Grasslands Soil	MEEHEVVEKRTVRRKEPIDNVTNVNVSPDGTTHVQESGSEVVEEEHVVEEHEHKHP
Ga0066669_103055671	3300018482	Grasslands Soil	VEEKEVVEKRTVRREEPVNKVTSVNVGPDGTTNVQESGDEVVEEEHVVEEHRHP
Ga0184642_13798283	3300019279	Groundwater Sediment	IIEKRTVRREEPLGKTTNVNVGPDGTTNVQESGDEVVEEEHVVEEHRHP
Ga0193747_10013105	3300019885	Soil	VEEKEIIEKRTVRREEPVDKVTNVNVGPDGTTNIQESGDTVVEEEHVVEEHRHP
Ga0193747_10590562	3300019885	Soil	VEEKEIVEKRTVRREEPVDTTTNVNIGPDGTTNVQKSEDAVVEEEHVIEEREPQP
Ga0193755_10555991	3300020004	Soil	VEEKTIIEKRTVREEPIDKTTNVNVGPDGTTNVQESGDAVIEEERVVEEHRHP
Ga0193735_10363564	3300020006	Soil	VEEKTIIEKRTVRKEPSDKTTNVNVGPDGTTNVQESGETVVEEEHVVEEHEHQP
Ga0210382_100133013	3300021080	Groundwater Sediment	VEEKEIIEKRTVRREEPLGKTTNVNVGPDGTTNVQESGDEVVEEEHVVEEHRHP
Ga0193719_100963002	3300021344	Soil	VEEKEVIEKRTVRREEPLGTTTNVNVGPDGTTNVQESGDAIVEEEHVIEERESQP
Ga0224452_11608292	3300022534	Groundwater Sediment	VEEKEIIEKRTVRREEPLDKTTNVNVGPDGTTNVQQSGDEVVEEERIVEEHRHP
Ga0222622_104698023	3300022756	Groundwater Sediment	VEEKEVIEKRTVRREEPLGKTTNVNVGPDGTTNVQESGDEVVEEEHVIEEHRHP
Ga0222622_104835354	3300022756	Groundwater Sediment	TIIEKRSVRKEPSDKTTNVNVGPDGTTNVQESGETVVEEEHVVEEHEHQP
Ga0193714_10101972	3300023058	Soil	VEEKEVTVEKRTTVVREEPVDKTTNVNIGPDGTTNIQESGDPVVEEEHVVEEHRRP
Ga0207640_101536213	3300025981	Corn Rhizosphere	VEEKTIIEKRTVREEPIDKTTNVNIGPDGTTNVEESGDDAVVEEEHVVEEHRNP
Ga0209237_10203493	3300026297	Grasslands Soil	MEEKEVIEKRTIRREEPTKKVTNVNVGPDGTTNMQQTDDEVVEEEHLIERHEHQP
Ga0209027_10441311	3300026300	Grasslands Soil	ATIRRRPVVEEKEIIEKRTVRRDEPLDKTTNVNVGPDGTTNVEESGDAVVEEEHVVEEHRHP
Ga0209027_10811813	3300026300	Grasslands Soil	VEEKEVVEKRTVHREEPLGTTTNVNVGPDGTTNMQQSGDEVVEEEHVVEEHRHP
Ga0209238_11046732	3300026301	Grasslands Soil	VEEKEIIEKRTVRRDEPLDKTTNVNVGPDGTTNVEESGDAVVEEEHVVEEHRHP
Ga0209469_10568792	3300026307	Soil	MEEHEVVEKRTVRRKEPIDRVTNVNVAPDGTTNVQESGSEVIEEEHVVEEHEHQHP
Ga0209239_12893432	3300026310	Grasslands Soil	VEEKEVIEKRTVRRDDPLGKTTNINVGPDGTTNVQESGDEEVVEEEHIVEEHRHP
Ga0209471_12137342	3300026318	Soil	VEEKEVTVEKRTSVRREEPLGKTTNVHIAPDGTTNIQESGGDPVVEEERVVEEHHHQP
Ga0209266_10457353	3300026327	Soil	MEEKEVIEKRTIRREEPTKKVTNVNVGPDGTTNVQQTDDEVVEEEHVIERHEHRP
Ga0209266_12943392	3300026327	Soil	VEEKEIIEKRTVRREDPLGKITNVNVGPDGTTNVQQSGGEVVEEEHIVEEHRHP
Ga0209808_10242582	3300026523	Soil	VEEKEVVEKRTVRRDEPIDKTTNVNVGPDGRTNVQESGTEVVEEEHVIEEHEHRHP
Ga0209806_10321033	3300026529	Soil	VEEKEIIEKRTVRRGEPDDKVTNINVGPDGTTNVQESGSEVVEEEHVVEEHEHRRP
Ga0209807_11198092	3300026530	Soil	VEEKEVVEKRTMRRDEPIDKTTNVNVGPDGRTNVQESGTEVVEEEHVIEEHEHRHP
Ga0209058_12159441	3300026536	Soil	EKWTVRREEPLGKTTNVNVGPDGTTNVQQSGDEVVEEEHVVEEHRHP
Ga0209157_10309583	3300026537	Soil	VEEREIVEKRTVRREEPLHKVTNINVGPDGTTNVQESGDEVVEEEHVVEEHEHRRP
Ga0209056_101681161	3300026538	Soil	MEEHEVVEKRTVRRKEPIDKVTNVNVAPDGTTNVQESGSEVIEEEHVVEQHEHQHP
Ga0209161_102248202	3300026548	Soil	VEEKEVVEKRTVRRDEPIDKTTNVNVGPDGTTNVQESGTEVVEEEHVIEEHEHRHP
Ga0137415_111418432	3300028536	Vadose Zone Soil	VEEKEIIEKRTIRREEPLGTTTNVNVGPDGTTNIQKSGDTVVEEEHVVEEHEHQP
Ga0307293_100104783	3300028711	Soil	VEEKEIIEKRTVRREEPIDKTTNVSVGPDGTTNVQESGDEVVEEEHVVEEHRLP
Ga0307313_100762712	3300028715	Soil	VEEKEVIEKRTVRREEPLGTTTNVNVRPDGTTNVQESGDAIVEEEHVIEERESQP
Ga0307320_104683211	3300028771	Soil	VEEKEVIEKRTVRREEPLGKTTNVNVGPDGTTNVQESGDDVVEEEHVIEEHRHP
Ga0307282_102835081	3300028784	Soil	VEEKTIIEKRTVRKEPSDKTTNVNVGPDGTTNVQESGDTVVEEEHVVEEHEHQP
Ga0307282_106690373	3300028784	Soil	SSDLKRTVRREEPLGKTTNVNVGPDGTTNVQESGDEVVEEEHVIEEHRHP
Ga0307302_100800041	3300028814	Soil	VEEKEIIEKRTVRREEPLDKTTNVNVGPDGTTNVQQSGDEVVEEERIVEEHIVEEHRHP
Ga0307302_106349202	3300028814	Soil	VEEKTIIEKRTVREEPGNKTTNVNVGPDGTTNVQESGDTVVEEEHVVEEHVVEEHRHP
Ga0307302_107066772	3300028814	Soil	RHALRLATTKEAGVEEKEVIEKRTIRREEPGNKVTNVNVGPDGTTNVQTSGDEVVEEEHVVEEREHKHP
Ga0307312_103780762	3300028828	Soil	VEEKTIIEKRSVRKEPSDKTTNVNVGPDGTTNVQESGETVVEEEHVVEEHEHQP
Ga0307312_109639361	3300028828	Soil	VEEKEIIEKRTVRREEPLDKTTNVNVGPDGTTNVQQSGDEVVEEERIV
Ga0307289_104922551	3300028875	Soil	RSLTQRRRHAVEEKEVIEKRTVRREEPLGTTTNVNVGPDGTTNVQESGDAIVEEEHVIEERESQP
Ga0307278_102047122	3300028878	Soil	VEEKEIIEKRTVRREEPLGKTTNVNIGPDGTTNVQESGDEVVEEEHVVEEHVVEEHRHP
Ga0307277_100045796	3300028881	Soil	VEEKEIIEKRTVRREEPVGKTTNVNVGPDGTTNVQQSGDEVVEEEHIVEEHRHP
Ga0307277_101844712	3300028881	Soil	VEEKEVIEKRTVRREEPVNKVTSVNIGADGTTNVQESGDAVVEEEHVIEERDPQP
Ga0307308_100097642	3300028884	Soil	VEEKTIIEKRTVRKEPSDKTTNVNVGPDGTTNVEESGETVVEEEHVVEEHEHQP
Ga0307304_100170175	3300028885	Soil	EKEIIEKRTVRREEPVDKVTNVNVGPDGTTNIQESGDTVVEEEHVVEEHRHP
Ga0308189_102072263	3300031058	Soil	AVEEKEVTVEKRTTVRREDPIDKTTNVNIGSDGTTNVQESGDDAVVEEEHVVEEHRHS
Ga0308189_103659561	3300031058	Soil	GRIAVEEKEVTVEKRTTVVREEPVDKTTNVNIGPDGTTNIQESGDPVVEEEHVVEEHRRP
Ga0307469_100742642	3300031720	Hardwood Forest Soil	VKEKEVVEKRTVRREEPVNKVTNINIAPNGTTNVQESGDEVVVEEHEHQRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065580

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences