NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065573

Metagenome / Metatranscriptome Family F065573

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065573
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 47 residues
Representative Sequence VEVGFRPMKDGSRGGQLMSVKLASGQKLCSNRGCGDGSGTVLAPF
Number of Associated Samples 114
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.15 %
% of genes near scaffold ends (potentially truncated) 96.85 %
% of genes from short scaffolds (< 2000 bps) 96.85 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.213 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.898 % of family members)
Environment Ontology (ENVO) Unclassified
(19.685 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.630 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 21.92%    Coil/Unstructured: 78.08%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF02424ApbE 1.59
PF13400Tad 1.59
PF04909Amidohydro_2 1.59
PF08402TOBE_2 1.59
PF12694cpYpsA 1.59
PF13676TIR_2 0.79
PF06676DUF1178 0.79
PF02518HATPase_c 0.79
PF01408GFO_IDH_MocA 0.79
PF12746GNAT_acetyltran 0.79
PF06808DctM 0.79
PF05199GMC_oxred_C 0.79
PF00805Pentapeptide 0.79
PF09364XFP_N 0.79
PF02771Acyl-CoA_dh_N 0.79
PF01019G_glu_transpept 0.79
PF00497SBP_bac_3 0.79
PF17172GST_N_4 0.79
PF03401TctC 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG1477FAD:protein FMN transferase ApbEPosttranslational modification, protein turnover, chaperones [O] 1.59
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 0.79
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.79
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.79
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.79
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.79
COG5319Uncharacterized conserved protein, DUF1178 domainFunction unknown [S] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.21 %
UnclassifiedrootN/A0.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004114|Ga0062593_101831056All Organisms → cellular organisms → Bacteria → Acidobacteria668Open in IMG/M
3300004152|Ga0062386_101266610All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300004153|Ga0063455_100215517All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300005166|Ga0066674_10119818All Organisms → cellular organisms → Bacteria → Acidobacteria1230Open in IMG/M
3300005166|Ga0066674_10194574All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300005174|Ga0066680_10132555All Organisms → cellular organisms → Bacteria → Acidobacteria1550Open in IMG/M
3300005332|Ga0066388_101652229All Organisms → cellular organisms → Bacteria → Acidobacteria1131Open in IMG/M
3300005332|Ga0066388_105579960All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300005356|Ga0070674_102108371All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005434|Ga0070709_10572814All Organisms → cellular organisms → Bacteria → Acidobacteria866Open in IMG/M
3300005434|Ga0070709_10822065All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300005437|Ga0070710_10796245All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300005437|Ga0070710_11427835All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300005538|Ga0070731_10404100All Organisms → cellular organisms → Bacteria → Acidobacteria908Open in IMG/M
3300005553|Ga0066695_10022537All Organisms → cellular organisms → Bacteria3542Open in IMG/M
3300005586|Ga0066691_10694033All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300005713|Ga0066905_101718770All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300005764|Ga0066903_104392535All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300005764|Ga0066903_104790391All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300005764|Ga0066903_108351295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria529Open in IMG/M
3300006046|Ga0066652_101661314All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300006050|Ga0075028_100938682All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300006052|Ga0075029_100511491All Organisms → cellular organisms → Bacteria → Acidobacteria794Open in IMG/M
3300006800|Ga0066660_10755949All Organisms → cellular organisms → Bacteria → Acidobacteria793Open in IMG/M
3300006845|Ga0075421_101612931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria705Open in IMG/M
3300006853|Ga0075420_101004946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria718Open in IMG/M
3300009012|Ga0066710_102499520All Organisms → cellular organisms → Bacteria → Acidobacteria747Open in IMG/M
3300009525|Ga0116220_10194577All Organisms → cellular organisms → Bacteria → Acidobacteria877Open in IMG/M
3300009610|Ga0105340_1104171All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300009672|Ga0116215_1140677All Organisms → cellular organisms → Bacteria → Acidobacteria1073Open in IMG/M
3300009762|Ga0116130_1221805All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300010036|Ga0126305_11005422All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300010036|Ga0126305_11005422All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300010335|Ga0134063_10774149All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300010373|Ga0134128_12462077All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300010376|Ga0126381_100822722All Organisms → cellular organisms → Bacteria1334Open in IMG/M
3300010379|Ga0136449_101325968All Organisms → cellular organisms → Bacteria → Acidobacteria1119Open in IMG/M
3300010396|Ga0134126_10912759All Organisms → cellular organisms → Bacteria → Acidobacteria987Open in IMG/M
3300011271|Ga0137393_10336928All Organisms → cellular organisms → Bacteria → Acidobacteria1287Open in IMG/M
3300011398|Ga0137348_1068895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300012041|Ga0137430_1030273All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia1425Open in IMG/M
3300012189|Ga0137388_11913437All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300012207|Ga0137381_10261976All Organisms → cellular organisms → Bacteria → Acidobacteria1503Open in IMG/M
3300012208|Ga0137376_10468198All Organisms → cellular organisms → Bacteria → Acidobacteria1094Open in IMG/M
3300012211|Ga0137377_11119090All Organisms → cellular organisms → Bacteria → Acidobacteria717Open in IMG/M
3300012396|Ga0134057_1117687All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300012469|Ga0150984_119011317All Organisms → cellular organisms → Bacteria → Acidobacteria832Open in IMG/M
3300012582|Ga0137358_11113234All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300012685|Ga0137397_11141883All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300012922|Ga0137394_10202146All Organisms → cellular organisms → Bacteria → Acidobacteria1697Open in IMG/M
3300012924|Ga0137413_10601055All Organisms → cellular organisms → Bacteria → Acidobacteria823Open in IMG/M
3300012925|Ga0137419_10921899All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300012930|Ga0137407_10958303All Organisms → cellular organisms → Bacteria → Acidobacteria810Open in IMG/M
3300012971|Ga0126369_11163375All Organisms → cellular organisms → Bacteria → Acidobacteria861Open in IMG/M
3300012977|Ga0134087_10201411All Organisms → cellular organisms → Bacteria → Acidobacteria891Open in IMG/M
3300014199|Ga0181535_10107087All Organisms → cellular organisms → Bacteria → Acidobacteria1795Open in IMG/M
3300014501|Ga0182024_12125073All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300015374|Ga0132255_100516463All Organisms → cellular organisms → Bacteria → Acidobacteria1757Open in IMG/M
3300015374|Ga0132255_106334224All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria501Open in IMG/M
3300016294|Ga0182041_10822174All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300016319|Ga0182033_11822032All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300016357|Ga0182032_10569930All Organisms → cellular organisms → Bacteria → Acidobacteria939Open in IMG/M
3300016445|Ga0182038_10384051All Organisms → cellular organisms → Bacteria → Acidobacteria1173Open in IMG/M
3300017961|Ga0187778_10647439All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300017972|Ga0187781_10758333All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300017975|Ga0187782_10901341All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300018062|Ga0187784_10841523All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300021168|Ga0210406_11122948All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300021170|Ga0210400_10883326All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300021178|Ga0210408_10904838All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300021180|Ga0210396_11653316All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300021406|Ga0210386_11350205All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300021420|Ga0210394_10941268All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300021432|Ga0210384_10163209All Organisms → cellular organisms → Bacteria2001Open in IMG/M
3300021479|Ga0210410_11071222All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300021559|Ga0210409_10323192All Organisms → cellular organisms → Bacteria → Acidobacteria1389Open in IMG/M
3300021560|Ga0126371_11459348All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300021560|Ga0126371_12310978All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300022533|Ga0242662_10337628All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300022709|Ga0222756_1089884All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300022717|Ga0242661_1072817All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300022721|Ga0242666_1204939All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300022756|Ga0222622_10173157All Organisms → cellular organisms → Bacteria → Acidobacteria1412Open in IMG/M
3300025936|Ga0207670_11384813All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300026118|Ga0207675_101365649All Organisms → cellular organisms → Bacteria → Acidobacteria729Open in IMG/M
3300026333|Ga0209158_1249482All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300026340|Ga0257162_1028933All Organisms → cellular organisms → Bacteria → Acidobacteria679Open in IMG/M
3300026355|Ga0257149_1025187All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300026490|Ga0257153_1012604All Organisms → cellular organisms → Bacteria → Acidobacteria1698Open in IMG/M
3300026496|Ga0257157_1100264All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300026542|Ga0209805_1212952All Organisms → cellular organisms → Bacteria → Acidobacteria820Open in IMG/M
3300026551|Ga0209648_10818794All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300027480|Ga0208993_1083952All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300027533|Ga0208185_1137675All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. MPMI2T566Open in IMG/M
3300027616|Ga0209106_1073398All Organisms → cellular organisms → Bacteria → Acidobacteria767Open in IMG/M
3300027629|Ga0209422_1125940All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300027662|Ga0208565_1200372All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300027696|Ga0208696_1254304All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300027846|Ga0209180_10184263All Organisms → cellular organisms → Bacteria → Acidobacteria1204Open in IMG/M
3300027882|Ga0209590_10641847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae682Open in IMG/M
3300027889|Ga0209380_10571708All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300027898|Ga0209067_10204364All Organisms → cellular organisms → Bacteria → Acidobacteria1063Open in IMG/M
3300027910|Ga0209583_10293406All Organisms → cellular organisms → Bacteria → Acidobacteria735Open in IMG/M
3300028536|Ga0137415_10054260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3876Open in IMG/M
3300030114|Ga0311333_11782499All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300030659|Ga0316363_10261044All Organisms → cellular organisms → Bacteria → Acidobacteria702Open in IMG/M
3300030740|Ga0265460_10978111All Organisms → cellular organisms → Bacteria → Acidobacteria777Open in IMG/M
3300031128|Ga0170823_15241504All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300031561|Ga0318528_10599811All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300031573|Ga0310915_10207039All Organisms → cellular organisms → Bacteria → Acidobacteria1373Open in IMG/M
3300031573|Ga0310915_11235749All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300031711|Ga0265314_10628958All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300031723|Ga0318493_10766917All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300031724|Ga0318500_10591779All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300031744|Ga0306918_10503231All Organisms → cellular organisms → Bacteria → Acidobacteria949Open in IMG/M
3300031820|Ga0307473_10480044All Organisms → cellular organisms → Bacteria → Acidobacteria834Open in IMG/M
3300031890|Ga0306925_10795479All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales982Open in IMG/M
3300031890|Ga0306925_11991387All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300031910|Ga0306923_12549144All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300032044|Ga0318558_10595292All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300032119|Ga0316051_1014280All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300032160|Ga0311301_10377738Not Available2190Open in IMG/M
3300032160|Ga0311301_10437047All Organisms → cellular organisms → Bacteria → Acidobacteria1979Open in IMG/M
3300032205|Ga0307472_102300029All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300032261|Ga0306920_100441073All Organisms → cellular organisms → Bacteria → Acidobacteria1935Open in IMG/M
3300032892|Ga0335081_10925490All Organisms → cellular organisms → Bacteria → Acidobacteria1025Open in IMG/M
3300032892|Ga0335081_12143219All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.09%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.30%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.72%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.15%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.15%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.15%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.36%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.57%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.57%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.57%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.57%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.79%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.79%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.79%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.79%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.79%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.79%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011398Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2EnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022709Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062593_10183105613300004114SoilWKKDMFSTGETIEVGFRPMKDGSRGGQLMSAKTEKGQKVCSNRGCGDGTGSVLAPF*
Ga0062386_10126661023300004152Bog Forest SoilVEVGFRPMKDGSRGGQLMSVKLASGQKLCSNRGCGDGSGTVLAPF*
Ga0063455_10021551713300004153SoilYRPMKDGSRGGQLMMVKFPGGDKVCSNRGCGDGTGNVLAPF*
Ga0066674_1011981813300005166SoilIGFRPMKDGSRGGQLMNVTLPNGQKLCSNRGCGDGTGSVPDPF*
Ga0066674_1019457433300005166SoilIGFRPMKDGSRGGQLMNVTLPNGQKLCSNRGCGDGTGSVLDPF*
Ga0066680_1013255513300005174SoilGVEVKIGFRPMKDGSRGGQLMNVTGPNCQKLCSNRGCGDGTGSVLDAF*
Ga0066388_10165222923300005332Tropical Forest SoilKVGDKVDVGFRPMKDGSRGGQLMSVTLPSGQRLCSNRGCGDGTGTVLNQ*
Ga0066388_10557996023300005332Tropical Forest SoilGFRPMKDGSRGGQIMSVKLASGQKLCSNRGCGDGSGGDLPPE*
Ga0070674_10210837113300005356Miscanthus RhizosphereRPMKDGSRGGQFMSAKLPSGQTLCSNRGCGDGSGKVLAPF*
Ga0070709_1057281423300005434Corn, Switchgrass And Miscanthus RhizosphereEVGFRPLKDGSRGGQLMSAKLSGGQKICSNRGCGDGSGQILAPF*
Ga0070709_1082206513300005434Corn, Switchgrass And Miscanthus RhizosphereAWSKDSFKIGDRVEVGFRPLKDGSRGGQLMSVKLANGQKVCSNRGCGDGSGAVLPPL*
Ga0070710_1079624523300005437Corn, Switchgrass And Miscanthus RhizosphereGFRPMKDGSRGGQIMNVKTATGQKLCSNRGCGDGSGQVLAPF*
Ga0070710_1142783513300005437Corn, Switchgrass And Miscanthus RhizosphereVEVGFRPMKDGSRGGQLMSVKFSSGQRVCSNRGCGDGTGTILNGTPAE*
Ga0070731_1040410013300005538Surface SoilVGYRPMKDGSHGGQLMSVKQANGQRVCSNRGCGDGTGEVLNGTPAQ*
Ga0066695_1002253753300005553SoilPAGVEVKIGFRPMKDGSRGGQLMNVTLPNGQKLCSNRGCGDGSGSVLDPF*
Ga0066691_1069403313300005586SoilDSFLIGKEVKIGFRPMKDGSRGGQIMNVTLASGQKLCSNRGCGDGTGSVLDPF*
Ga0066905_10171877013300005713Tropical Forest SoilKDGSRGGQLMSIKFENGQRICSHRGCGDGTGTVVPE*
Ga0066903_10439253513300005764Tropical Forest SoilGFRPMKDGSRGGQLMSVKFEDGKRVCSNRGCGDGSGTVLNQ*
Ga0066903_10479039113300005764Tropical Forest SoilPMKDGSRGGQLMSIKLANGQKLCSNRGCGDGTGQVLAPF*
Ga0066903_10835129513300005764Tropical Forest SoilHPRVGDKVKVGFHPLKDGSGGGQLMTVKFSTGEELCSNRGCGVGSNTVPGVYRPPR*
Ga0066652_10166131423300006046SoilDGSRGGQLMSVKLPGGQRLCSNRGCGDGTGTVLGPL*
Ga0075028_10093868223300006050WatershedsVGFRPMKDGSRGGQLMSVTLASGQKLCSNRGCGDGTGAVLAPF*
Ga0075029_10051149113300006052WatershedsGWKDSFRTGDRIEVGFRPMKDGSRGGQLMSVTLASGQKLCSNRGCGDGTGAILAPF*
Ga0066660_1075594923300006800SoilLGWSKDKPRIGEEVEVGFRPLKDGSRGGQLMSVKLPGGQRLCSNRGCGDGTGTVLGPL*
Ga0075421_10161293113300006845Populus RhizosphereSFRVGDKVEVGFRPMKDGSRGGQFMSAKLPGGQTLCSNRGCGDGSGKVLAPF*
Ga0075420_10100494613300006853Populus RhizosphereMKDGSRGGQFMSAKLPGGQTLCSNRGCGDGSGKVLAPF*
Ga0066710_10249952013300009012Grasslands SoilSFPVGNEVKIGFRPMKDGSRGGQIMNVTLANGQKLCSNRGCGDGTGSVLDPF
Ga0116220_1019457723300009525Peatlands SoilVEVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF*
Ga0105340_110417113300009610SoilDVGFRPMRDGSRGGQFMSAKLPNGQTLCSNRGCGDGSGKVLPAF*
Ga0116215_114067723300009672Peatlands SoilVGDTVEVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF*
Ga0116130_122180523300009762PeatlandGWSKDSFRIDDKVEVGFRPMKDGSRGGQLMSVKLASGQKLCSNRGCGDGSGTVLAPF*
Ga0126305_1100542213300010036Serpentine SoilRPMRDGSRGGQFMSAKLPGGQTLCSNRGCGDGSGKVLAPF*
Ga0126305_1100542223300010036Serpentine SoilGFRPMRDGSRGGQFMSAKLPGGQMLCSNRGCGDGSGKVLAPF*
Ga0134063_1077414913300010335Grasslands SoilGWSRDKPRIGERVEVGFRPLKDGSHGGQLMSVKLPNGERLCSNRGCGDGTGTVLGPL*
Ga0134128_1246207713300010373Terrestrial SoilFRPMKDGSRGGQLMSATPQGGQKVCSNRGCGDGTGNILAPF*
Ga0126381_10082272233300010376Tropical Forest SoilDGSRGGQLMSAKLANGDRICSNRGCGDGTGSVLAPF*
Ga0136449_10132596813300010379Peatlands SoilTSLGWSASTFRVGDTVEVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF
Ga0134126_1091275913300010396Terrestrial SoilHPMKDGSRGGQLMNAKTANGQKLCSNRDCGDGTGQVLPPF*
Ga0137393_1033692813300011271Vadose Zone SoilKPENFHVGDKVEVGFRPLKDGSRGGQLMSAKLSDGQKICSNRGCGDGSGSILAPF*
Ga0137348_106889523300011398SoilFRPMKDGSRGGQFMSAKLASGQTLCSNRGCGDGSGKVLAPF*
Ga0137430_103027313300012041SoilKVEVGFRPMKDGSRGGQFMSAKLASGQTLCSNRGCGDGSGKVLAPF*
Ga0137388_1191343713300012189Vadose Zone SoilSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQE*
Ga0137381_1026197613300012207Vadose Zone SoilVGFRPLKDGSRGGQLMSAKVSGGQKICSNRGCGDGSGSILAPF*
Ga0137376_1046819833300012208Vadose Zone SoilMKDGSRGGQLMSVKLPSGKMICSNRGCGDGRTETPLPPF*
Ga0137377_1111909023300012211Vadose Zone SoilEVGFRPLKDGSRGGQLMSAKLANGQKVCSNRGCGDGSGEVLGPN*
Ga0134057_111768723300012396Grasslands SoilFPAGVEVKIGFRPMKDGSRGGQLMNVTLPNGQKLCSNRGCGDGTGSVLDPF*
Ga0150984_11901131733300012469Avena Fatua RhizosphereGDKIEIGFRPMKDGTRGGQLMSAKLANGQNVCSNRGCGDGTGGILVGF*
Ga0137358_1111323423300012582Vadose Zone SoilSRDAFHPGDKLDVGFRPMKDGSRGGQLMSVKLPSGKMICSNRGCGDGRTETPLPPF*
Ga0137397_1114188313300012685Vadose Zone SoilPGDKLDVGFRPMKDGSRGGQLMSVKLPSGKMICSNRGCGDGRTETPLPPF*
Ga0137394_1020214633300012922Vadose Zone SoilWSRDAFRPGDKLDVGFRPMKDGSRGGQLMSVKLPSGKMICSNRGCGDGRTETPLPPF*
Ga0137413_1060105513300012924Vadose Zone SoilIVRAGDKVDVGFRPMKDGSRGGQLMTIKLPNGEKMCSHRGCGDGTGVPLAE*
Ga0137419_1092189913300012925Vadose Zone SoilEVGFRPMKDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQ*
Ga0137407_1095830313300012930Vadose Zone SoilKDGSRGGQLMSVKMASGKKLCSNRGCGDGSGTILAPF*
Ga0126369_1116337513300012971Tropical Forest SoilRPMKDGSRGGQLMSATPDQGKKVCSNRGCGDGSGNIVPGQYRE*
Ga0134087_1020141123300012977Grasslands SoilKDGSRGGQLMNVTLPNGQKFCSNRGCGDGTGSVLDPF*
Ga0181535_1010708713300014199BogKDSFRIDDKVEVGFRPMKDGSRGGQLMSVKLASGQKLCSNRGCGDGSGTVLAPF*
Ga0182024_1212507323300014501PermafrostFRPMKDGSRGGQLMSVKLASGQKLCSNRGCGDGSGAVLAPF*
Ga0132255_10051646333300015374Arabidopsis RhizosphereHVGDKVEVGFRPMKDGSRGGQLMSVKTGDGKKVCSNRGCGDGSGNGLAPF*
Ga0132255_10633422423300015374Arabidopsis RhizospherePMKDGSRGGQLMSVKFADGEKVCSNRGCGDGTGAVIGPN*
Ga0182041_1082217423300016294SoilKDGSHGGQLMSVKLPGGDRLCSNRGCGDGTGQILGPL
Ga0182033_1182203223300016319SoilLKDGSRGGQLMNVKLESGQKLCSNRGCGDGTGSIVPGDYRP
Ga0182032_1056993013300016357SoilVGDKVEIGFRPLKDGSRGGQLMSVKPANGEKVCSNRGCGDGTGSVLPPL
Ga0182038_1038405113300016445SoilEAVEVGFRPLKDGSHGGQLMSVKLPGGDRLCSNRGCGDGTGQILGPL
Ga0187778_1064743913300017961Tropical PeatlandPMKDGSRGGQLMSVKLPNGQKLCSNRGCGDGSGAVLPGF
Ga0187781_1075833313300017972Tropical PeatlandKDSFKVGDKVEVGFRPLKDGSRGGQLMSVKLANGEKVCSNRGCGDGTGSVLPPL
Ga0187782_1090134113300017975Tropical PeatlandVEVGFRPLKDGSRGGQLMSVKPANGEKVCSNRGCGDGTGSVLAPF
Ga0187784_1084152313300018062Tropical PeatlandFRPLKDGSRGGQLMSVKPANGEKVCSNRGCGDGTGSVLPPL
Ga0210406_1112294823300021168SoilDVEVGFRPMKDGSRGGQLMSVKFADGRKVCSNRGCGDGTGTVLNGTNE
Ga0210400_1088332613300021170SoilPGEKVEVAFRPMKDGSRGGQLMSATPAGGQKVCSNRGCGDGSGNILAPF
Ga0210408_1090483813300021178SoilEIFRVGDKIQVGYHPMKDGSRGGQLMSVTLASGQKLCSNRGCGDGTGQILAPF
Ga0210396_1165331623300021180SoilIDDKVEVGFRPMKDGSRGGQLMSVKLASGQRLCSNRGCGDGSGTVLAPF
Ga0210386_1135020523300021406SoilGDDVEVGYRPMKDGSRGGQLMSVKFSSGQKVCSNRGCGDGTGTVLNGTPAE
Ga0210394_1094126823300021420SoilAFRPMKDGSRGGQLMSATPAGGQKVCSNRGCGDGSGNILAPF
Ga0210384_1016320943300021432SoilDDIEVGFRPMKDGSRGGQLMSVKFSSGQRVCSNRGCGDGTGTVLNGTPTE
Ga0210410_1107122223300021479SoilGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF
Ga0210409_1032319213300021559SoilFRPMKDGSRGGQLMSVKFSSGQRVCSNRGCGDGTGTVLNGTNE
Ga0126371_1145934813300021560Tropical Forest SoilRVGETVEVGFRPLKDGSRGGQLMSVKFPNGQRVCSNRGCGDGTGNIVPGEYRQQQ
Ga0126371_1231097823300021560Tropical Forest SoilGEMIEVGFRPMKDGSRGGQLMSVKFPNGQRVCSNRGCGDGTGDIVPGVYRPQE
Ga0242662_1033762823300022533SoilLGDRVEVGFRPLKDGSRGGQLMSVKLANGQKVCSNRGGGDGSGAVLPPL
Ga0222756_108988423300022709SoilSLGWKDSLRAGDKLEVGFHPMKDGSRGGQLMNVMLPNGQKLCSNRGCGDGTGAVLAPF
Ga0242661_107281723300022717SoilKVGDEVEVGFRPMKDGSRGGQLMSVKFSNGQKVCSNRGCGDGSGNILAPF
Ga0242666_120493923300022721SoilVGFRPLKDGSRGGQLMSVKLQGGQKLCSNRGCGDGTGAVVPGVYRDQ
Ga0222622_1017315713300022756Groundwater SedimentPDSFHTGDKIEVGFRPLKDGSRGGQLMSAKLQGGQKICSNRGCGDGSGAILAPF
Ga0207670_1138481313300025936Switchgrass RhizosphereADGFHVGDKVEVGFRPMKDGSRGGQLMSVKTGDGKKVCSNRGCGDGTGNVLAPF
Ga0207675_10136564913300026118Switchgrass RhizosphereMKDGSRGGQFMSAKLASGQTLCSNRGCGDGSGKVLAPF
Ga0209158_124948213300026333SoilDSFLIGKEVKIGFRPMKDGSRGGQIMNVTLASGQKLCSNRGCGDGTGSVLDPF
Ga0257162_102893313300026340SoilPRVGETIEVGFRPMKDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQ
Ga0257149_102518723300026355SoilETIEVGFRPMKDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQ
Ga0257153_101260413300026490SoilDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQ
Ga0257157_110026413300026496SoilGFRPMKDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGDIVPGIYRPQE
Ga0209805_121295233300026542SoilVEVGFRPLKDGSRGGQLMSVKLPGGQRLCSNRGCGDGTGTVLGPL
Ga0209648_1081879423300026551Grasslands SoilVGEMIEVGFRPMKDGSRGGQLMSVKFPGGQKVCSNRGCGDGTGEIVPGAYRPQ
Ga0208993_108395213300027480Forest SoilNVEIGYRPMKDGSRGGQLMSVKFSDGHRVCSNRGCGDGTGQMLNN
Ga0208185_113767513300027533SoilDVGFRPMRDGSRGGQFMSAKLPNGQTLCSNRGCGDGSGKVLPAF
Ga0209106_107339813300027616Forest SoilSFHTGDKIEVGFRPLKDGSRGGQLMSAKLQGGQKICSNRGCGDGTGQMLNN
Ga0209422_112594023300027629Forest SoilWSKDSFRIDDKVEVGFRPTKDGSRGGQLMSVKFSNGQRVCSNRGCGDGTGTVLNGTPTE
Ga0208565_120037223300027662Peatlands SoilVGDTVEVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF
Ga0208696_125430413300027696Peatlands SoilVEVGFRPLKDGSRGGQLMSIKLTNGQKLCSNRGCGDGTGSVLAPF
Ga0209180_1018426313300027846Vadose Zone SoilRPMKDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQE
Ga0209590_1064184713300027882Vadose Zone SoilHVGDKVEVGFRPLKDGSRGGQLMSAKLSDGQKICSNRGCGDGSGAILAPF
Ga0209380_1057170813300027889SoilIRTKVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF
Ga0209067_1020436413300027898WatershedsKDSFRTGDRIEVGFRPMKDGSRGGQLMSVTLASGQKLCSNRGCGDGTGAILAPF
Ga0209583_1029340623300027910WatershedsVGDQVEIGFRPLKDGSRGGQLMSVKYADGEKLCSNRGCGDGTGEILAPF
Ga0137415_1005426013300028536Vadose Zone SoilGFRPMKDGSRGGQLMSVKFPSGQKVCSNRGCGDGTGEIVPGAYRPQ
Ga0311333_1178249913300030114FenPMRDGSRGGQLMTIKFLNGERMCSHRGCGDGTGTPLAE
Ga0316363_1026104413300030659Peatlands SoilVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF
Ga0265460_1097811113300030740SoilGDKIEVGFRPMKDGSRGGQLMNVKLESGQKLCSNRGCGDGTGSVLAPF
Ga0170823_1524150423300031128Forest SoilVVGFRPMKDGSRGGQLMSAKPERGQKVCSNRGCGDGSGAVLPGQ
Ga0318528_1059981113300031561SoilGDKVEIGFRPMKDGSRGGQIMSVKRADGEKLCSNRGCGDGTGSILAPF
Ga0310915_1020703923300031573SoilVRPGDKIEVGFYRLKDGSRGGQLMNVKLESGQKLCSNRGCGDGTGSIVPGDYRP
Ga0310915_1123574923300031573SoilTEKFKPGDKVEIGFRPMKDGSRGGQIMSVKRTDGEKLCSNRGCGDGTGQILAPF
Ga0265314_1062895823300031711RhizosphereVEVGFRPLKDGSRGGQLMSVKLGSGQRLCSNRGCGDGTGTIPPPL
Ga0318493_1076691723300031723SoilYRPMKDGSHGGQLMSVKFSNGQKVCSNRGCGDGTGTILNGTPGE
Ga0318500_1059177913300031724SoilSFKVGDEIEVGYRPMKDGSHGGQLMSVKFSNGQKVCSNRGCGDGTGTILNGTPGE
Ga0306918_1050323123300031744SoilGFRPLKDGSRGGQLMSVKFSNGERVCSNRGCGDGTGNIVPGVYRPQQ
Ga0307473_1048004413300031820Hardwood Forest SoilKDGSRGGQLMSVKFPNGQKVCSNRGCGDGTGNIVPGVYRPQE
Ga0306925_1079547923300031890SoilYRLKDGSRGGQLMNVKLESGQRLCSNRGCGDGTGPIVPGDYRP
Ga0306925_1199138723300031890SoilESFKVGDEIEVGYRPMKDGSHGGQLMSVKFSNGQKVCSNRGCGDGTGAILNGTPAE
Ga0306923_1254914413300031910SoilEVEVGYRPMKDGSHGGQLMSVKFSSGQKVCSNRGCGDGTGTILNGTPNE
Ga0318558_1059529213300032044SoilPRVGETVEVGFRPLKDGSRGGQLMSVKFSNGERVCSNRGCGDGTGNIVPGVYRPQQ
Ga0316051_101428013300032119SoilPMKDGSRGGQLMNVKLENGQKLCSNRGCGDGTGSVLAPF
Ga0311301_1037773823300032160Peatlands SoilNQLVSLGWKDSVRPGDKIDVGFRRLKDGSRGGQLMNVKLETGQKLCSNLGCGD
Ga0311301_1043704743300032160Peatlands SoilWSASTFRVGDTVEVGFHPLKDGSRGGQLMSVVPASGQKLCSNRGCGDGTGSVLAPF
Ga0307472_10230002923300032205Hardwood Forest SoilDFKVGEKVEVGFRPMKDGSRGGQLMSVKLANGQKLCSNRGCGDDSSTVAAPD
Ga0306920_10044107313300032261SoilSRGGQLMSVKFPNGQRVCSNRGCGDGTGNIVPGEYRP
Ga0335081_1092549033300032892SoilKDSFKVGDRVEVGFRPLKDGSRGGQLMSVKLANGQKVCSNRGCGDGSGAVLPPL
Ga0335081_1214321923300032892SoilVEVGFRPMKDGSRGGQLMSVKLPNGQKLCSNRGCGDGSGAILPGF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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