Metagenome / Metatranscriptome Family F065569

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065569
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	45 residues
Representative Sequence	AVAYAIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS
Number of Associated Samples	104
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.21 %
% of genes from short scaffolds (< 2000 bps)	93.70 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.969 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.961 % of family members)
Environment Ontology (ENVO)	Unclassified (43.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.307 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.78% β-sheet: 0.00% Coil/Unstructured: 47.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00119	ATP-synt_A	71.65
PF00137	ATP-synt_C	7.09
PF07238	PilZ	5.51
PF00496	SBP_bac_5	0.79
PF00507	Oxidored_q4	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	71.65
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	7.09
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
All Organisms	root	All Organisms	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
cellular organisms	root	All Organisms → cellular organisms	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	22.05 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.05 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.05 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.05 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.94 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	22.05 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.36 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1029546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	730	Open in IMG/M
3300001593\|JGI12635J15846_10572808	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	659	Open in IMG/M
3300001593\|JGI12635J15846_10721132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	574	Open in IMG/M
3300004080\|Ga0062385_11021606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	556	Open in IMG/M
3300004082\|Ga0062384_100691600	Not Available	701	Open in IMG/M
3300004091\|Ga0062387_101351816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	565	Open in IMG/M
3300004091\|Ga0062387_101450423	Not Available	548	Open in IMG/M
3300005177\|Ga0066690_10637747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	710	Open in IMG/M
3300005591\|Ga0070761_10359214	Not Available	884	Open in IMG/M
3300005591\|Ga0070761_10916543	Not Available	554	Open in IMG/M
3300005610\|Ga0070763_10227570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1003	Open in IMG/M
3300005921\|Ga0070766_10231080	Not Available	1167	Open in IMG/M
3300006052\|Ga0075029_100230445	Not Available	1165	Open in IMG/M
3300006052\|Ga0075029_100748496	Not Available	662	Open in IMG/M
3300006052\|Ga0075029_100840755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300006059\|Ga0075017_100402900	Not Available	1026	Open in IMG/M
3300006059\|Ga0075017_101006976	Not Available	649	Open in IMG/M
3300006059\|Ga0075017_101327856	Not Available	565	Open in IMG/M
3300006086\|Ga0075019_10830731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300006102\|Ga0075015_100123154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1325	Open in IMG/M
3300006162\|Ga0075030_101258064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300006162\|Ga0075030_101391525	Not Available	550	Open in IMG/M
3300006800\|Ga0066660_11093587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300009518\|Ga0116128_1131075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300009521\|Ga0116222_1506466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300009524\|Ga0116225_1505273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009547\|Ga0116136_1028299	Not Available	1738	Open in IMG/M
3300009623\|Ga0116133_1072464	Not Available	861	Open in IMG/M
3300009628\|Ga0116125_1090641	Not Available	810	Open in IMG/M
3300009638\|Ga0116113_1158532	Not Available	570	Open in IMG/M
3300009700\|Ga0116217_10184294	Not Available	1379	Open in IMG/M
3300009700\|Ga0116217_10352044	Not Available	940	Open in IMG/M
3300009839\|Ga0116223_10116357	Not Available	1681	Open in IMG/M
3300010379\|Ga0136449_100932100	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1410	Open in IMG/M
3300010379\|Ga0136449_104006056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300010379\|Ga0136449_104471837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012207\|Ga0137381_10232914	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1599	Open in IMG/M
3300012212\|Ga0150985_111878254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012361\|Ga0137360_10973981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300012363\|Ga0137390_10991777	Not Available	792	Open in IMG/M
3300012917\|Ga0137395_11257959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300012924\|Ga0137413_10213614	Not Available	1304	Open in IMG/M
3300012929\|Ga0137404_11533345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300014152\|Ga0181533_1197192	Not Available	781	Open in IMG/M
3300014162\|Ga0181538_10543393	Not Available	609	Open in IMG/M
3300014164\|Ga0181532_10035005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3438	Open in IMG/M
3300014164\|Ga0181532_10036075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3377	Open in IMG/M
3300014165\|Ga0181523_10013359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5758	Open in IMG/M
3300014199\|Ga0181535_10230819	Not Available	1123	Open in IMG/M
3300014838\|Ga0182030_11431714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	574	Open in IMG/M
3300016702\|Ga0181511_1536048	Not Available	541	Open in IMG/M
3300016750\|Ga0181505_10531343	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300017823\|Ga0187818_10084514	Not Available	1370	Open in IMG/M
3300017823\|Ga0187818_10179957	Not Available	922	Open in IMG/M
3300017823\|Ga0187818_10201279	Not Available	869	Open in IMG/M
3300017932\|Ga0187814_10219571	Not Available	717	Open in IMG/M
3300017933\|Ga0187801_10440819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300017935\|Ga0187848_10296132	Not Available	676	Open in IMG/M
3300018005\|Ga0187878_1362894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300018007\|Ga0187805_10066050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1626	Open in IMG/M
3300018013\|Ga0187873_1118469	Not Available	1032	Open in IMG/M
3300018017\|Ga0187872_10073276	Not Available	1768	Open in IMG/M
3300018020\|Ga0187861_10483911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300018021\|Ga0187882_1376495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300018022\|Ga0187864_10192379	Not Available	973	Open in IMG/M
3300018023\|Ga0187889_10300861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	709	Open in IMG/M
3300018023\|Ga0187889_10472646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300018026\|Ga0187857_10238105	Not Available	840	Open in IMG/M
3300018038\|Ga0187855_10079248	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300018038\|Ga0187855_10422652	Not Available	776	Open in IMG/M
3300018038\|Ga0187855_10743684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300018043\|Ga0187887_10796148	Not Available	559	Open in IMG/M
3300018043\|Ga0187887_10809224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300018044\|Ga0187890_10017035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4515	Open in IMG/M
3300018044\|Ga0187890_10078683	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300018062\|Ga0187784_10488019	Not Available	993	Open in IMG/M
3300018085\|Ga0187772_10198273	Not Available	1347	Open in IMG/M
3300018090\|Ga0187770_11706743	Not Available	515	Open in IMG/M
3300019284\|Ga0187797_1870889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300019785\|Ga0182022_1330076	Not Available	1303	Open in IMG/M
3300019787\|Ga0182031_1032996	Not Available	1092	Open in IMG/M
3300019787\|Ga0182031_1309363	Not Available	1188	Open in IMG/M
3300021407\|Ga0210383_10943080	Not Available	734	Open in IMG/M
3300021411\|Ga0193709_1020597	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300021559\|Ga0210409_10282447	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300021559\|Ga0210409_11700538	Not Available	507	Open in IMG/M
3300022872\|Ga0224526_1030196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1164	Open in IMG/M
3300022875\|Ga0224553_1028493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1339	Open in IMG/M
3300025434\|Ga0208690_1030795	Not Available	873	Open in IMG/M
3300025477\|Ga0208192_1051327	Not Available	820	Open in IMG/M
3300026376\|Ga0257167_1023686	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300026482\|Ga0257172_1043925	Not Available	816	Open in IMG/M
3300026557\|Ga0179587_10787075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300027110\|Ga0208488_1014599	Not Available	1557	Open in IMG/M
3300027432\|Ga0209421_1002086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3537	Open in IMG/M
3300027535\|Ga0209734_1031972	Not Available	983	Open in IMG/M
3300027570\|Ga0208043_1139334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300027641\|Ga0208827_1142448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300027662\|Ga0208565_1118324	Not Available	788	Open in IMG/M
3300027696\|Ga0208696_1028578	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300027745\|Ga0209908_10020493	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300027795\|Ga0209139_10311618	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027829\|Ga0209773_10121800	Not Available	1082	Open in IMG/M
3300027853\|Ga0209274_10185209	Not Available	1057	Open in IMG/M
3300027853\|Ga0209274_10634953	Not Available	552	Open in IMG/M
3300027898\|Ga0209067_10139765	Not Available	1280	Open in IMG/M
3300028069\|Ga0255358_1058192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300028268\|Ga0255348_1046637	Not Available	793	Open in IMG/M
3300028649\|Ga0302162_10022349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1421	Open in IMG/M
3300028800\|Ga0265338_10936736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	588	Open in IMG/M
3300029817\|Ga0247275_1145504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300029951\|Ga0311371_12024396	Not Available	610	Open in IMG/M
3300030011\|Ga0302270_10446681	Not Available	682	Open in IMG/M
3300030230\|Ga0302207_1162878	Not Available	571	Open in IMG/M
3300030494\|Ga0310037_10074611	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1591	Open in IMG/M
3300030506\|Ga0302194_10347434	Not Available	583	Open in IMG/M
3300030518\|Ga0302275_10267061	Not Available	962	Open in IMG/M
3300030659\|Ga0316363_10064938	Not Available	1693	Open in IMG/M
3300030707\|Ga0310038_10202510	Not Available	946	Open in IMG/M
3300030991\|Ga0073994_10014178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300031231\|Ga0170824_115351670	Not Available	1015	Open in IMG/M
3300031234\|Ga0302325_10211781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3311	Open in IMG/M
3300031247\|Ga0265340_10324669	Not Available	681	Open in IMG/M
3300031823\|Ga0307478_11275124	Not Available	611	Open in IMG/M
3300031823\|Ga0307478_11528963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300032805\|Ga0335078_11164383	Not Available	894	Open in IMG/M
3300032955\|Ga0335076_10337959	Not Available	1392	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.64%
Host-Associated	Host-Associated	2.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.33%
Aquatic	Environmental → Aquatic	43.31%
Plants	Host-Associated → Plants	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.67%
Freshwater	Environmental → Aquatic → Freshwater	34.65%
Sediment	Environmental → Aquatic → Sediment	8.66%
Peat	Environmental → Terrestrial → Peat	8.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	34.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.56%
Loam	Environmental → Terrestrial → Soil → Loam	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.09%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.51%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.15%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.36%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.36%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.57%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.79%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030230	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_2	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10295461	3300001154	Forest Soil	GLVGAAAYAIFKSSPTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES*
JGI12635J15846_105728082	3300001593	Forest Soil	EKGGWIVLRFVVRYGLVGAAAYAIFISSAPAFRGFLWGLCVPVVALMAEAVWAGYMAFRRTS*
JGI12635J15846_107211322	3300001593	Forest Soil	LLVGAVAYAIFKSSELAFRGFLWGLLVPVAALMVEAGWEAYAALTRG*
Ga0062385_110216061	3300004080	Bog Forest Soil	RFVVRYGLVAAVAYAIFKGSSLAFRGFLWGLCVPAAALMIEAVWEGYATFRRTE*
Ga0062384_1006916001	3300004082	Bog Forest Soil	LVGAVAYAIFKGSSVAFRGFLWGLCVPVAALMAEAVWQGYTAFRRTS*
Ga0062387_1013518162	3300004091	Bog Forest Soil	VRYGLVGAAAYAIFMSSSVAFRGFLWGLCVPVAALMAEAAWEGYTALRRTS*
Ga0062387_1014504232	3300004091	Bog Forest Soil	VAAVAYAIFKSSSPAFFGFLWGLCVPAAGLMIEACWEGYSAFRRDS*
Ga0066690_106377471	3300005177	Soil	AIFKSSHAAFRGFLWGLCVPVAALMAEAAWEGYMAFRRAE*
Ga0070761_103592141	3300005591	Soil	IFVGSLLAFHGFLWGLCVPVTALMAEAIWQGYTAFRGARRG*
Ga0070761_109165431	3300005591	Soil	VAAVAYAIFKSSSQAFRGFLWGLCVPVAALMAEAVWEVYEAFRSPTDS*
Ga0070763_102275702	3300005610	Soil	GLVGAVAYAIFKSSSQAFDGFLWGLCVPVGALMAEAVWQGFTSFRRPM*
Ga0070766_102310801	3300005921	Soil	AFHGFLWGLCVPVTALMAEAIWQGYAAFRGARRG*
Ga0075029_1002304451	3300006052	Watersheds	VAYAIFKGSSLAFRGFLWGLCVPVAALMAEAAWEGYAAFRRVE*
Ga0075029_1007484962	3300006052	Watersheds	AYAIFKGSSLAFYGFLWGLCVPVAALMAEAVWEGYRAFRRS*
Ga0075029_1008407552	3300006052	Watersheds	LVGAAAYAIFKSSSLAFRGFLWGLCVPVAALMAEAAWEGYRAFRRV*
Ga0075017_1004029001	3300006059	Watersheds	GLVGAAAYAIFKSSSLAFRGFLWGLCVPVAALMAEAVWQGYHALRGTE*
Ga0075017_1010069762	3300006059	Watersheds	AYAIFKGSALAFRGFLWGLCLPVAAMMIEAAFEAYTAFGRESE*
Ga0075017_1013278562	3300006059	Watersheds	SSLAFRGFLWGLCVPVAALMAEAAWEGYAAFRRVE*
Ga0075019_108307311	3300006086	Watersheds	IFNGSALAFHGFLWGLCLPVAAMMIEAALEAYAALRRQ*
Ga0075015_1001231543	3300006102	Watersheds	AIFKSSSLAFRGFLWGLCVPVAALMAEAVWQGYHALRGTE*
Ga0075030_1012580642	3300006162	Watersheds	LVAVVAYAIFKGSALAFRGLLWGLCVPVSSLMIEAGIETYVAFRRN*
Ga0075030_1013915252	3300006162	Watersheds	FLVRYGLVAVVAYAIFKGSSQAFRGFLWGLCVPVAALMAEAVWEGYAAFRRN*
Ga0066660_110935872	3300006800	Soil	SALAFRGFLWGLLVPAGALMLEAAWESYMALRQRV*
Ga0116128_11310752	3300009518	Peatland	WITLRFVVRYGLVGAVAYAIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTALRRAS*
Ga0116222_15064662	3300009521	Peatlands Soil	AVAYAIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS*
Ga0116225_15052732	3300009524	Peatlands Soil	VRYGLVGAAAYAIFISSALAFRGFLWGLCVPVAALMAEAAWEAYTAFRRPS*
Ga0116136_10282991	3300009547	Peatland	VFKGSPLGLRGVLWGLCVPVAALRAEAAWEGYTAFRRG*
Ga0116133_10724641	3300009623	Peatland	RIVLRFVVRYGLVGAAAYAIFKGSSVAFRGFLWGLCVPVAALMAEAVWEGYAALRRAS*
Ga0116125_10906411	3300009628	Peatland	AYAIFKGSSVAFYGFLWGLCVPVAALMAEAVWEGFTAFRRD*
Ga0116113_11585322	3300009638	Peatland	VVAYAIFKGSALAFRGFLWGLCLPVAAMMIEAGFELYAAFRK*
Ga0116217_101842943	3300009700	Peatlands Soil	GLVGAVAYAIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYAALRRAS*
Ga0116217_103520441	3300009700	Peatlands Soil	GLVGAVAYAIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS*
Ga0116223_101163574	3300009839	Peatlands Soil	SSLAFRGFLWGLCVPVAALMAEGVWAGYTAFRREM*
Ga0136449_1009321001	3300010379	Peatlands Soil	SSSLAFRGFLWGLCVPVAALMAEAAWEGYTALRRTS*
Ga0136449_1040060561	3300010379	Peatlands Soil	SSSLAFRGFLWGLCVPVAALMAEAVWEGYTALRRAS*
Ga0136449_1044718372	3300010379	Peatlands Soil	VRYGLVGAAAYAIFISSALAFRGFLWGLCVPVAALMAEAAWEGYTAFRRAS*
Ga0137381_102329143	3300012207	Vadose Zone Soil	AAYAIFKSSALAFRGFLWGLCLPVAAMMVEAAVEAYTAFRQKQL*
Ga0150985_1118782542	3300012212	Avena Fatua Rhizosphere	CSSDLFRGFLWGLCLPVAAMMAEAGVEAWMAFRRK*
Ga0137360_109739811	3300012361	Vadose Zone Soil	AYAIFKSSALAFRGFLWGLCLPVAAMTVEAGVEAYAAFRQK*
Ga0137390_109917772	3300012363	Vadose Zone Soil	VRYGLVGAAAYAIFKSSPTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRIG*
Ga0137395_112579592	3300012917	Vadose Zone Soil	PTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES*
Ga0137413_102136143	3300012924	Vadose Zone Soil	SAVAFRGFLWGLCLPVAAMMAEAGVEAYAAFRSK*
Ga0137404_115333452	3300012929	Vadose Zone Soil	YAIFKSSALAFRGFLWGLCLPVAAMMVEAGVEACAAFCKK*
Ga0181533_11971921	3300014152	Bog	AAAYVIFKSSSLAFRGFLWGLCVPVAALMAEAAWEGYTAFRRSE*
Ga0181538_105433932	3300014162	Bog	AYAIFKSSSQAFRGFLWGLCVPVAALMVEAVWEGYAALRRAS*
Ga0181532_100350051	3300014164	Bog	VVRYGLVGAAAYAIFKSSSMAFRGFLWGLCVPVAALMAEAVWEGYMALRRAS*
Ga0181532_100360751	3300014164	Bog	VVRYGLVGAAAYAIFKSSSMAFRGFLWGLCVPVAALMAEAAWEGYIALRRAS*
Ga0181523_100133596	3300014165	Bog	RFLVRYGLVAAVAYAIFKSSSLAFRGFLWGLCVPVAALMAEAAWVGYMAFRRTP*
Ga0181535_102308191	3300014199	Bog	GAAAYAIFKSSSMAFRGFLWGLCVPVAALMAEAAWEGYIALRRAS*
Ga0182030_114317142	3300014838	Bog	VVRYGLVGGLAYAIFKSSLVAFYGFLWGLLVPVAALMIEAVWEGYNAFRRPD*
Ga0181511_15360481	3300016702	Peatland	AAAYAIFKSSSMAFRGFLWGLCVPVAALMAEAVWEGYMALRRAS
Ga0181505_105313434	3300016750	Peatland	AAYAIFKSSSMAFRGFLWGLCVPVAALMAEAVWEGYMALRRAS
Ga0187818_100845143	3300017823	Freshwater Sediment	LVRYGLVGVAAYAIFESSSLAFRGFLWGLCVPVAALMAEAVWEGYTALRRAS
Ga0187818_101799572	3300017823	Freshwater Sediment	VVAYAIFKGSALAFRGFLWGLCVLVVAMMIEAGIEAYAAFQRN
Ga0187818_102012791	3300017823	Freshwater Sediment	SSSMAFRGFLWGLCVPVAALMAEAAWAGYTAFRRET
Ga0187814_102195712	3300017932	Freshwater Sediment	SSSLAFRGFLWGLCVPVAALMAEAVWEGYTALRRAS
Ga0187801_104408192	3300017933	Freshwater Sediment	IFKSSVLAFRGFLWGLCLPAAAMMVEAGIEAYVAFRE
Ga0187848_102961322	3300017935	Peatland	SPLAFRGFLWGLCVPVAALMAEAVWEGYAALWRAS
Ga0187878_13628941	3300018005	Peatland	AAAYAIFKSSSLAFRGFLWGLCVPVAALMAEAAWEGYLAFRRVS
Ga0187805_100660501	3300018007	Freshwater Sediment	AAAYAIFKSSSLAFRGFLWGLCVPVAALMAEAVWEGYVAFRR
Ga0187873_11184691	3300018013	Peatland	AYAIFKSSPLAFRGFLWGLCVPVAALMAEAAWEGYTAFRRG
Ga0187872_100732764	3300018017	Peatland	VGVAAYAIFKSSPLAFRGFLWGLCVPVAALMAEAAWEGYTAFRRG
Ga0187861_104839112	3300018020	Peatland	FKSSSWAFRGFLWGLCVPVAALMAEAAWEGYMAFRREL
Ga0187882_13764951	3300018021	Peatland	GGWITLRFVVRYGLVGAVAYAIFRSSSLAFHGFLWGLCVPVAALMAEAVWEGYTALRRAS
Ga0187864_101923791	3300018022	Peatland	GGWITLRFVVRYGLVGAVAYAIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTALRRAS
Ga0187889_103008612	3300018023	Peatland	FLVRYGLVGAVAYAIFKGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRTS
Ga0187889_104726462	3300018023	Peatland	YGLVGAVAYAIFRSSSLAFHGFLGGLCVPVAALMAEAVWEGYAALRRAS
Ga0187857_102381052	3300018026	Peatland	RSSSLAFRGFLWGLCVPVAALMAEAVWEGYTALRRAS
Ga0187855_100792485	3300018038	Peatland	RFVVRYGLVAAAAYAIFKGSSLAFRGFLWGLCVPVAALMAEAVWEGYAAFRRAE
Ga0187855_104226522	3300018038	Peatland	VAYAIFKGSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRDS
Ga0187855_107436842	3300018038	Peatland	AYAIFKGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRTS
Ga0187887_107961481	3300018043	Peatland	AYAIFKGSSVAFYGFLWGLCVPVAALMAEAVWEGFTAFRRD
Ga0187887_108092241	3300018043	Peatland	AIFMSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAE
Ga0187890_100170354	3300018044	Peatland	RFVVRYGLVGAVAYAIFKSSSLAFRGFLWGLCVPVAALMVEAVWEGYTALRRAS
Ga0187890_100786834	3300018044	Peatland	VGAAAYVIFIGSPLVFRGFLWGLCVPVPALMVEAVWEGYNAFRSAD
Ga0187784_104880191	3300018062	Tropical Peatland	RIILRFLVRYGLVGAVAYAIFRSSSLAFRGFLWGLCVPVVALMAEAVWEGYMALRRAS
Ga0187772_101982733	3300018085	Tropical Peatland	YAIFRGSALAFRGFLWGLCLPVAAMMIEAAVEAWVAFWK
Ga0187770_117067432	3300018090	Tropical Peatland	RFLVRYGLVAVVAYAIFKTSALAFRGFLWGLCAPVAAMMIEAGFEAYAAFRK
Ga0187797_18708892	3300019284	Peatland	VAYAIFKGSALAFRGFLWGLCVPVAAMMIEAGLEAIMAFRRD
Ga0182022_13300763	3300019785	Fen	MSSSLAFRGFLWGLCVPVAALMVEAVWAGYTAFRRG
Ga0182031_10329961	3300019787	Bog	GLVAGLVAAVAYAIFKGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRVS
Ga0182031_13093632	3300019787	Bog	KGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRVS
Ga0210383_109430801	3300021407	Soil	VRYGLVAAAAYAIFRSSRTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES
Ga0193709_10205971	3300021411	Soil	AAAYAIFKSSPTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES
Ga0210409_102824473	3300021559	Soil	SSPTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES
Ga0210409_117005381	3300021559	Soil	VFRYVVRYLLVAVVAYAIFKGSSVAFYGFLWGLCVPVAALMAEAVWQGFAAFRKTS
Ga0224526_10301961	3300022872	Soil	FMVRYGLVAAVAYAIFKGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRVS
Ga0224553_10284931	3300022875	Soil	RYGLVAAVAYAIFKGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRVS
Ga0208690_10307952	3300025434	Peatland	YAIFKGSSLAFRGFLWGLCVPVAALMAEAVWEGYAAFRRAE
Ga0208192_10513271	3300025477	Peatland	LVRYGLVGAAAYAIFKSSSLAFRGFLWGLCVPVAALMAEAAWEGYLAFRRVS
Ga0257167_10236862	3300026376	Soil	AAAYAIFKSSRLAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES
Ga0257172_10439252	3300026482	Soil	GAAAYAIFKSSPTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRES
Ga0179587_107870752	3300026557	Vadose Zone Soil	KSSPTAFRGFLWGLCVPVAALMAEAAWEGYMAFRRAE
Ga0208488_10145991	3300027110	Forest Soil	LAYAIFVGSLLAFHGFLWGLCVPVTALMAEAIWQGYTAFRGARRG
Ga0209421_10020861	3300027432	Forest Soil	FLLRYALVGAVAYAIFVGSALAFRGFLWGLCLPVGAMMIEAAFEAYAAFRK
Ga0209734_10319721	3300027535	Forest Soil	KSSSLAFSGFLWGLCVPVAAFMTEALWQAYMAFRRTS
Ga0208043_11393341	3300027570	Peatlands Soil	KGGWITLRFVVRYGLVGAVAYVIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRA
Ga0208827_11424481	3300027641	Peatlands Soil	GGWITLRFVVRYGLVGAVAYVIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS
Ga0208565_11183242	3300027662	Peatlands Soil	KSSSLAFRGFLWGLCVPVAALMAEAAWEGYAAFRRVPLQRS
Ga0208696_10285781	3300027696	Peatlands Soil	SSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS
Ga0209908_100204931	3300027745	Thawing Permafrost	IFKSSPLAFRGFLWGLCVPVAALMAEAAWEGYMAFRS
Ga0209139_103116181	3300027795	Bog Forest Soil	KGGLIVFRFAVRYGLVAAAAYAIFIGSTMAFRGFLWGLCVPVAALMAEAVWAGYTAFRR
Ga0209773_101218002	3300027829	Bog Forest Soil	GLVAAVAYAIFKSSSPAFFGFLWGLCVPAAGLMIEACWEGYSAFRRDS
Ga0209274_101852092	3300027853	Soil	IFVGSLLAFHGFLWGLCVPVTALMAEAIWQGYTAFRGARRG
Ga0209274_106349531	3300027853	Soil	VAAVAYAIFKSSSQAFRGFLWGLCVPVAALMAEAVWEVYEAFRSPTDS
Ga0209067_101397653	3300027898	Watersheds	YGLVAVVAYAIFKGSSLAFRGFLWGLCLPVAAMMIEAGVETYAAFRRD
Ga0255358_10581922	3300028069	Soil	IFKSSSLAFRGFLGGLCVPVAALMAEAVWEGYVAFRRVS
Ga0255348_10466372	3300028268	Soil	AIFKGSSLAFRGFLWGLCVPAAALMVEAVWEGYTAFRRVS
Ga0302162_100223491	3300028649	Fen	ESSAVAFRGFLWGLCLPVAAMMVEAGVEAYVAFRRE
Ga0265338_109367361	3300028800	Rhizosphere	IVRYGLVGAAAYAIFKSSSPAFRGFLWGLCVPVAALMVEAAWEGYTAFRRAS
Ga0247275_11455041	3300029817	Soil	SSSWAFRGFLWGLCVPVAALMAEALWEGYMAFRRGS
Ga0311371_120243961	3300029951	Palsa	VAYAIFINSTVAFRGFLWGLCVPAAALMAEAAWEGYSAFRRTS
Ga0302270_104466811	3300030011	Bog	YAIFKSSLVAFYGFLWGLLMPVAALMIEAVWEGYNAFRRPD
Ga0302207_11628781	3300030230	Fen	VAYAIFESSAVAFRGFLWGLCLPVAAMMVEAGVEAYVAFRRE
Ga0310037_100746111	3300030494	Peatlands Soil	AYVIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS
Ga0302194_103474341	3300030506	Bog	LVRYGLVGVAAYVIFMGSPLVFRGFLWGLCVPVPALMVEAVWEGYNAFRSAD
Ga0302275_102670612	3300030518	Bog	LVGAAAYVIFIGSPLVFRGFLWGLCVPVPALMVEAVWEGYNAFRSAD
Ga0316363_100649381	3300030659	Peatlands Soil	YGLVGAAAYAIFKSSSLAFRGFLWGLCVPVAALMAEGVWAGYTAFRREM
Ga0310038_102025101	3300030707	Peatlands Soil	TLRFVVRYGLVGAVAYVIFRSSSLAFRGFLWGLCVPVAALMAEAVWEGYTAFRRAS
Ga0073994_100141782	3300030991	Soil	SSSTAFRGFLWGLCVPVAALMAEAAWEGYTAFRRAE
Ga0170824_1153516701	3300031231	Forest Soil	GAVAYAIFKSSSTAFRGFLWGLCVPVAALMAEAVWQGYTAFRRES
Ga0302325_102117811	3300031234	Palsa	GSVAYAIFINSTVAFRGFLWGLCVPAAALMAEAAWEGYSAFRRTS
Ga0265340_103246691	3300031247	Rhizosphere	FKSSALAFRGFLWGLCVPVAALMVEAAWEGYAAFRRSE
Ga0307478_112751241	3300031823	Hardwood Forest Soil	VRYGLVAAAAYAIFKGSSVAFHGFLWGLCVPAAALLVEAAWEGYGAFRRVP
Ga0307478_115289631	3300031823	Hardwood Forest Soil	FRFVVRYGLVGVAAYAIFKGSSVAFDGFLWGLCVPVAALMAEAVWQGFAAFRGTS
Ga0335078_111643832	3300032805	Soil	AYAIFRGSAQAFRGFLWGLCLPVAAMMIEAGVEAYAAFRK
Ga0335076_103379593	3300032955	Soil	AYAIFGGSASAFRGFLWGLCLPVAAMMIEAGVEAWAAFRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065569

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences