NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F065551

Metagenome Family F065551

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065551
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 45 residues
Representative Sequence MKTNWWVESGMAAQAAQELVWFVVIVVVGIGVVIWLDMRKDK
Number of Associated Samples 62
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.83 %
% of genes near scaffold ends (potentially truncated) 21.26 %
% of genes from short scaffolds (< 2000 bps) 74.02 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (58.268 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(22.047 % of family members)
Environment Ontology (ENVO) Unclassified
(55.118 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(55.906 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 52.86%    β-sheet: 0.00%    Coil/Unstructured: 47.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF10765Phage_P22_NinX 6.30
PF13203DUF2201_N 5.51
PF07728AAA_5 3.94
PF00004AAA 1.57
PF13589HATPase_c_3 0.79
PF11348DUF3150 0.79
PF08774VRR_NUC 0.79



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A58.27 %
All OrganismsrootAll Organisms41.73 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002408|B570J29032_109643259Not Available981Open in IMG/M
3300002835|B570J40625_100146151All Organisms → Viruses → Predicted Viral2715Open in IMG/M
3300004240|Ga0007787_10116823All Organisms → Viruses → Predicted Viral1258Open in IMG/M
3300004240|Ga0007787_10187858Not Available1003Open in IMG/M
3300005662|Ga0078894_10203773Not Available1791Open in IMG/M
3300005739|Ga0076948_1025567All Organisms → Viruses → Predicted Viral2353Open in IMG/M
3300005805|Ga0079957_1010711Not Available6914Open in IMG/M
3300006802|Ga0070749_10513403Not Available652Open in IMG/M
3300008107|Ga0114340_1000495Not Available63059Open in IMG/M
3300008107|Ga0114340_1015679Not Available6296Open in IMG/M
3300008107|Ga0114340_1193814Not Available692Open in IMG/M
3300008107|Ga0114340_1198757Not Available676Open in IMG/M
3300008113|Ga0114346_1121573All Organisms → Viruses → Predicted Viral1161Open in IMG/M
3300008116|Ga0114350_1026507All Organisms → Viruses → Predicted Viral4202Open in IMG/M
3300008116|Ga0114350_1102276Not Available902Open in IMG/M
3300008116|Ga0114350_1165625Not Available592Open in IMG/M
3300008120|Ga0114355_1197536Not Available652Open in IMG/M
3300008120|Ga0114355_1218340Not Available593Open in IMG/M
3300008259|Ga0114841_1026719All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6302Open in IMG/M
3300008266|Ga0114363_1012642All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3926Open in IMG/M
3300008266|Ga0114363_1032693All Organisms → Viruses → Predicted Viral2184Open in IMG/M
3300008266|Ga0114363_1039340All Organisms → Viruses → Predicted Viral1941Open in IMG/M
3300008266|Ga0114363_1062382All Organisms → Viruses → Predicted Viral1444Open in IMG/M
3300008266|Ga0114363_1073951All Organisms → Viruses → Predicted Viral1286Open in IMG/M
3300008266|Ga0114363_1104936Not Available1010Open in IMG/M
3300008448|Ga0114876_1092495All Organisms → Viruses → Predicted Viral1225Open in IMG/M
3300008448|Ga0114876_1154945Not Available830Open in IMG/M
3300008450|Ga0114880_1008766All Organisms → cellular organisms → Bacteria5073Open in IMG/M
3300008450|Ga0114880_1176050Not Available743Open in IMG/M
3300009085|Ga0105103_10070410Not Available1787Open in IMG/M
3300009165|Ga0105102_10629445Not Available595Open in IMG/M
3300009168|Ga0105104_10029785All Organisms → Viruses → Predicted Viral3082Open in IMG/M
3300009169|Ga0105097_10725316Not Available564Open in IMG/M
3300010354|Ga0129333_10014531All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.7482Open in IMG/M
3300010354|Ga0129333_10081894All Organisms → Viruses → Predicted Viral2992Open in IMG/M
3300010354|Ga0129333_10165587Not Available2024Open in IMG/M
3300010354|Ga0129333_10242191All Organisms → Viruses → Predicted Viral1629Open in IMG/M
3300010354|Ga0129333_10371887All Organisms → Viruses → Predicted Viral1269Open in IMG/M
3300010354|Ga0129333_10656736Not Available905Open in IMG/M
3300010370|Ga0129336_10114682All Organisms → Viruses → Predicted Viral1573Open in IMG/M
3300010370|Ga0129336_10397970Not Available753Open in IMG/M
(restricted) 3300013126|Ga0172367_10001366Not Available35675Open in IMG/M
(restricted) 3300013126|Ga0172367_10012903All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.8642Open in IMG/M
3300013372|Ga0177922_10263671All Organisms → Viruses → Predicted Viral1039Open in IMG/M
3300013372|Ga0177922_10717009All Organisms → Viruses614Open in IMG/M
3300017707|Ga0181363_1055274Not Available704Open in IMG/M
3300017747|Ga0181352_1026840All Organisms → Viruses → Predicted Viral1754Open in IMG/M
3300017747|Ga0181352_1086831Not Available869Open in IMG/M
3300017747|Ga0181352_1098030Not Available806Open in IMG/M
3300017747|Ga0181352_1177685Not Available553Open in IMG/M
3300017747|Ga0181352_1205331Not Available506Open in IMG/M
3300017754|Ga0181344_1011685All Organisms → Viruses → Predicted Viral2806Open in IMG/M
3300017754|Ga0181344_1052713All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1212Open in IMG/M
3300017754|Ga0181344_1160208Not Available640Open in IMG/M
3300017754|Ga0181344_1230433Not Available515Open in IMG/M
3300017766|Ga0181343_1208522All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage534Open in IMG/M
3300017785|Ga0181355_1216131Not Available747Open in IMG/M
3300020172|Ga0211729_10269500Not Available892Open in IMG/M
3300020172|Ga0211729_11128609Not Available596Open in IMG/M
3300020541|Ga0208359_1030377Not Available844Open in IMG/M
3300020570|Ga0208465_1027069Not Available746Open in IMG/M
3300021961|Ga0222714_10035465All Organisms → Viruses → Predicted Viral3645Open in IMG/M
3300021961|Ga0222714_10063084All Organisms → Viruses → Predicted Viral2494Open in IMG/M
3300021961|Ga0222714_10068896All Organisms → Viruses → Predicted Viral2353Open in IMG/M
3300021961|Ga0222714_10105345All Organisms → Viruses → Predicted Viral1774Open in IMG/M
3300021961|Ga0222714_10110844All Organisms → Viruses → Predicted Viral1714Open in IMG/M
3300022179|Ga0181353_1007840All Organisms → Viruses → Predicted Viral2609Open in IMG/M
3300022179|Ga0181353_1017767Not Available1854Open in IMG/M
3300022179|Ga0181353_1057337Not Available1011Open in IMG/M
3300022179|Ga0181353_1059429Not Available990Open in IMG/M
3300022179|Ga0181353_1077695Not Available841Open in IMG/M
3300022179|Ga0181353_1107867Not Available678Open in IMG/M
3300022179|Ga0181353_1114566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans650Open in IMG/M
3300022179|Ga0181353_1123178Not Available618Open in IMG/M
3300022179|Ga0181353_1139751Not Available565Open in IMG/M
3300022179|Ga0181353_1156164Not Available522Open in IMG/M
3300022190|Ga0181354_1112316Not Available881Open in IMG/M
3300026478|Ga0255156_1080019Not Available580Open in IMG/M
3300027608|Ga0208974_1009894All Organisms → Viruses → Predicted Viral3121Open in IMG/M
3300027659|Ga0208975_1165217Not Available610Open in IMG/M
(restricted) 3300027730|Ga0247833_1049316All Organisms → Viruses → Predicted Viral2295Open in IMG/M
3300027743|Ga0209593_10129027Not Available917Open in IMG/M
3300027804|Ga0209358_10271000Not Available846Open in IMG/M
3300027804|Ga0209358_10489185Not Available562Open in IMG/M
3300027899|Ga0209668_11098759Not Available535Open in IMG/M
(restricted) 3300027977|Ga0247834_1238174Not Available662Open in IMG/M
3300028025|Ga0247723_1014623All Organisms → Viruses → Predicted Viral2851Open in IMG/M
3300028025|Ga0247723_1054968All Organisms → Viruses → Predicted Viral1122Open in IMG/M
(restricted) 3300028114|Ga0247835_1130809All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage934Open in IMG/M
(restricted) 3300028114|Ga0247835_1230009Not Available614Open in IMG/M
(restricted) 3300028559|Ga0247831_1065017Not Available1772Open in IMG/M
(restricted) 3300028569|Ga0247843_1021291Not Available5164Open in IMG/M
(restricted) 3300028569|Ga0247843_1047584All Organisms → Viruses → Predicted Viral2464Open in IMG/M
3300031758|Ga0315907_10079623All Organisms → Viruses → Predicted Viral2827Open in IMG/M
3300031758|Ga0315907_10135357All Organisms → Viruses → Predicted Viral2094Open in IMG/M
3300031758|Ga0315907_10250677All Organisms → Viruses → Predicted Viral1469Open in IMG/M
3300031758|Ga0315907_10954762Not Available624Open in IMG/M
3300031758|Ga0315907_11140509Not Available551Open in IMG/M
3300031787|Ga0315900_10298207All Organisms → Viruses → Predicted Viral1338Open in IMG/M
3300031787|Ga0315900_10875096Not Available608Open in IMG/M
3300031857|Ga0315909_10022251All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6349Open in IMG/M
3300031857|Ga0315909_10051610All Organisms → Viruses → Predicted Viral3803Open in IMG/M
3300031857|Ga0315909_10114229All Organisms → Viruses → Predicted Viral2297Open in IMG/M
3300031857|Ga0315909_10276755All Organisms → Viruses → Predicted Viral1270Open in IMG/M
3300031857|Ga0315909_10303207All Organisms → Viruses → Predicted Viral1193Open in IMG/M
3300031857|Ga0315909_10453329Not Available901Open in IMG/M
3300031857|Ga0315909_10796734Not Available598Open in IMG/M
3300031951|Ga0315904_10269147All Organisms → Viruses → Predicted Viral1618Open in IMG/M
3300031951|Ga0315904_10640033Not Available906Open in IMG/M
3300031951|Ga0315904_10885973Not Available722Open in IMG/M
3300031951|Ga0315904_11012012Not Available658Open in IMG/M
3300031951|Ga0315904_11408857Not Available519Open in IMG/M
3300032050|Ga0315906_10713478Not Available803Open in IMG/M
3300034012|Ga0334986_0056197All Organisms → Viruses → Predicted Viral2478Open in IMG/M
3300034012|Ga0334986_0094709All Organisms → Viruses → Predicted Viral1800Open in IMG/M
3300034062|Ga0334995_0388987Not Available877Open in IMG/M
3300034071|Ga0335028_0625620Not Available575Open in IMG/M
3300034092|Ga0335010_0462276Not Available677Open in IMG/M
3300034092|Ga0335010_0586027Not Available569Open in IMG/M
3300034096|Ga0335025_0589325Not Available549Open in IMG/M
3300034101|Ga0335027_0724687Not Available587Open in IMG/M
3300034101|Ga0335027_0754511Not Available570Open in IMG/M
3300034106|Ga0335036_0429116Not Available842Open in IMG/M
3300034109|Ga0335051_0031004All Organisms → Viruses → Predicted Viral2900Open in IMG/M
3300034111|Ga0335063_0589611Not Available525Open in IMG/M
3300034112|Ga0335066_0209889All Organisms → Viruses → Predicted Viral1148Open in IMG/M
3300034355|Ga0335039_0646477Not Available515Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake22.05%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater18.11%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater15.75%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton13.39%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.30%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.15%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.15%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.94%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.94%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater2.36%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.57%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.79%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.79%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.79%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.79%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.79%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.79%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005739Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300020541Freshwater microbial communities from Lake Mendota, WI - 26AUG2009 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020570Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300026478Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027730 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_8mEnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027977 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12mEnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028114 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_13.5mEnvironmentalOpen in IMG/M
3300028559 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1mEnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300034012Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034092Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069EnvironmentalOpen in IMG/M
3300034096Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034109Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M
3300034112Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191EnvironmentalOpen in IMG/M
3300034355Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
B570J29032_10964325923300002408FreshwaterMKTTWWIESGYAAEAARELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD*
B570J40625_10014615133300002835FreshwaterMKTSWWYESGMAAEAAQGLVWFVVIVFVGIGLLIWNDIRKDKRDGKK*
Ga0007787_1011682313300004240Freshwater LakeMKTVWWYESGLAAQAAQELVWFVVIVVVGIGVMAWRDMRKEKPKRKEHNDGL*
Ga0007787_1018785813300004240Freshwater LakeMKTNWWIESGYAAEAARELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD*
Ga0078894_1020377323300005662Freshwater LakeMKTNWWVDSGMAAQAAQELVWFVVIVVVGIGIVIWLDMRKDK*
Ga0076948_102556733300005739Lake WaterMKTNWWIESGMAAQAAQELVWFVVIVFVGIGIVIWLDMRKDK*
Ga0079957_1010711123300005805LakeMKTSWWYESGMAAEAAQGLVWFVVIVFVGIGLFIWNDIRKDKRDGKK*
Ga0070749_1051340343300006802AqueousMKTSWWYESGAASQAAHELMWFVIIVVVGIGVVIWLDMRKDK*
Ga0114340_1000495293300008107Freshwater, PlanktonMKTSWWYESGMAAEAAQELVWFVVIVFVGIGLLIWNDIRKDKRDGKK*
Ga0114340_101567983300008107Freshwater, PlanktonMKTNWWIDSGMASQAAHELMWFVIIVVVGIGVVIWLDMRKDK*
Ga0114340_119381423300008107Freshwater, PlanktonMKTSWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGI*
Ga0114340_119875713300008107Freshwater, PlanktonMKTAWWYESGMAAQAAQELMWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGL*
Ga0114346_112157333300008113Freshwater, PlanktonMKTSWWYESGMAAQAAHELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGL*
Ga0114350_102650773300008116Freshwater, PlanktonMKTNWWIDSGMAAQAAQELVWFVVIVVVGIGVVIWLDIRKDK*
Ga0114350_110227633300008116Freshwater, PlanktonMKTSWWYESGLAAAAAQELVWFVVFCFILIGVAIWLDMRK*
Ga0114350_116562533300008116Freshwater, PlanktonMKTSWWIESGYAAEAAKELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD*
Ga0114355_119753613300008120Freshwater, PlanktonQAAHELVWFVVLIVVGIGVVIWRDIRNEKKEKKDD*
Ga0114355_121834023300008120Freshwater, PlanktonMKTNWWIDSGMAAQAAQELVWFVVLVVVGIGVVIWLDMRKDK*
Ga0114841_1026719123300008259Freshwater, PlanktonMKTSWWYESGAAAQAAQELVWFVVLVFVGIGLVIWHDIRKEKPKPKRKEHNNGL*
Ga0114363_101264283300008266Freshwater, PlanktonMKTSWWYESGAAAQAAQELVWFVVLVVVGIGVVIWRDMRNEKKEKKDD*
Ga0114363_103269343300008266Freshwater, PlanktonMKTNWWIDSGMASQAAHELVWFVVLVVVGIGVVIWLDIRNDK*
Ga0114363_103934023300008266Freshwater, PlanktonMKTNWWVDSGMAAQAAQELVWFVVIVVVGIGVVIWLDMRKDK*
Ga0114363_106238233300008266Freshwater, PlanktonMKTAWWYESGMAAQAAHELVWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGL*
Ga0114363_107395153300008266Freshwater, PlanktonMKTNWWIDSGMAAQAAQELVWFVVIVVVGIGVVIWLDMRKDK*
Ga0114363_110493623300008266Freshwater, PlanktonMKTNWWIDSGMASQAAHELVWFVVIVVIGIGVVIWLDIRNDK*
Ga0114876_109249523300008448Freshwater LakeMKTTWWYESGQAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGI*
Ga0114876_115494523300008448Freshwater LakeMKTAWWYESGMAAQELVWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGI*
Ga0114880_100876673300008450Freshwater LakeMKTNWWIDSGMAAQAAHELVWFVVLVVVGIGVVIWLDIRKDK*
Ga0114880_117605033300008450Freshwater LakeMKTNYWYESGLAAQAAQELVWFVVIVFVGIGLLAWRD
Ga0105103_1007041073300009085Freshwater SedimentMKTNWWVESGMAAQAAQELVWFVVIVVVGIGIMAWRDMRK
Ga0105102_1062944513300009165Freshwater SedimentQMKTSWWIESGMAAQAAQELMWFVVLVVVGIGVVIWFDMRNDK*
Ga0105104_1002978573300009168Freshwater SedimentMKTVWWIESGMAAQAAQELVWFVVLVFVGIGLVIWHDIRKEKPKPKRKEHNNGL*
Ga0105097_1072531613300009169Freshwater SedimentMKTSWWIESGMAAQAAQELVWFVVLVVVGIGVVIWFDMRNDK*
Ga0129333_1001453163300010354Freshwater To Marine Saline GradientMKTAWWYESGQAAQAAQELVWFVVLVVVGIGVVIWRDIRNEKKEKKDD*
Ga0129333_1008189423300010354Freshwater To Marine Saline GradientMKTSWWIESGAASQAAHELMWFVIIVVVGIGVVIWLDMRKDK*
Ga0129333_1016558783300010354Freshwater To Marine Saline GradientMINKMNWWYESGQAAEAAQELVWFVVIVFVGVGVILWLNDRKNK*
Ga0129333_1024219133300010354Freshwater To Marine Saline GradientMKTTWWYESGQAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGL*
Ga0129333_1037188713300010354Freshwater To Marine Saline GradientMKTSWWYESGQAAQAAQELVWFVVLVFIGIGVVIWLDIRKEKPKRKEHKDGL*
Ga0129333_1065673623300010354Freshwater To Marine Saline GradientMKTTWWYESGAAAQAAQELVWFVVLVFVGIGLVIWHDMRKEKPKPKRKEHNNGL*
Ga0129336_1011468233300010370Freshwater To Marine Saline GradientMKTTWWYESGQAAQAAQELVWFVVLVFIGIGVVIWLDIRKEKPKRKEHKDGL*
Ga0129336_1039797013300010370Freshwater To Marine Saline GradientIESGAASQAAHELMWFVIIVVVGIGVVIWLDMRKDK*
(restricted) Ga0172367_1000136673300013126FreshwaterMKINWWVDSGLASQAAHELMWFVIIVFVGLGVVIWLDMRKDK*
(restricted) Ga0172367_10012903113300013126FreshwaterMKINWWVDSGLASQAAHELAWFVILVFVGLGVMIWRDIQKEKKEKKDD*
Ga0177922_1026367153300013372FreshwaterMKTTWWYESGLAAQAAQELMWFVVIVVVGIGVMAWRDM
Ga0177922_1071700923300013372FreshwaterMKTNWWYESGAAAQAAQQLMWFVVLVVVGIGVVIWFDMRNDK*
Ga0181363_105527423300017707Freshwater LakeMKTNWWIESGYAAEAAKELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0181352_102684033300017747Freshwater LakeMKTSWWIDSGMASQAAHELMWFVIIVVVGIGVVIWLDMRKDK
Ga0181352_108683113300017747Freshwater LakeMNWWYESGQAAQAAQELVWFVVIIFVGIGVVIWLNDRKK
Ga0181352_109803013300017747Freshwater LakeMKTNWWIESGMASEAAHELVWFVVLVFVGIGLVIWNDIRKGD
Ga0181352_117768523300017747Freshwater LakeMKTSWWIESGAASQAAHELMWFVLIVVVGVGVVIWLDMRNDK
Ga0181352_120533123300017747Freshwater LakeMKTSWWYESGLAAQAAQELVWFVVLVFVGIGLVIWHDIRKEKPKPKRKEHNNGL
Ga0181344_101168533300017754Freshwater LakeMKTNWWYESGAASQAAHELMWFVVLVVVGIGVVIWFDMRNDK
Ga0181344_105271343300017754Freshwater LakeMKTNWWVESGYAAEAARELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0181344_116020843300017754Freshwater LakeMKTNWWSESGLAAQAAQDLVWFRVLVFVGIGLLIWRDM
Ga0181344_123043313300017754Freshwater LakeMKTSWWIESGAASQAAHELMWFVIIVVVGIGVVIWLDMRKDK
Ga0181343_120852213300017766Freshwater LakeMINKTNWWYESGQAAEAAQELVWFVVIVFVGGGLVLWINDRKNK
Ga0181355_121613123300017785Freshwater LakeMRTSWWYESGAAAQAAQELMWFVVLVVVGIGVVIWFDMRNDK
Ga0211729_1026950013300020172FreshwaterMKTSWWYESGAAAQAAQELVWFVVLVVVGIGVVIWRDIRNEKKERKDD
Ga0211729_1112860913300020172FreshwaterMKTNWWIESGMASQAAHELVWFVVIVVVGIGVVIWLDMRNDK
Ga0208359_103037733300020541FreshwaterMKTAWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGI
Ga0208465_102706923300020570FreshwaterMKTTWWIESGYAAEAARELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0222714_1003546543300021961Estuarine WaterIDSGMAAQAAQELVWFVVLVVVGIGVVIWLDIRKDK
Ga0222714_1006308493300021961Estuarine WaterMKTSWWYESGLAAAAAQELVWFVVFCFILIGVAIWLDMRK
Ga0222714_1006889643300021961Estuarine WaterMKTSWWYESGQAAQAAQGLVWFVVLVVVGIGVVIWRDIRNEKKEKKDD
Ga0222714_1010534543300021961Estuarine WaterMKTTWWYESGQAAQAAQELVWFVVLVFIGIGVVIWLDIRKEKPKRKEHKDGL
Ga0222714_1011084413300021961Estuarine WaterMKTNWWIDSGMAAQAAQELVWFVVLVVVGIGVVIWLDIRKDK
Ga0181353_100784013300022179Freshwater LakeEMKTSWWYESGLAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHNDGI
Ga0181353_101776733300022179Freshwater LakeMKTNWWVDSGMAAQAAQELVWFVVIVVVGIGIVIWLDMRKDK
Ga0181353_105733743300022179Freshwater LakeKTNWWIESGYAAEAAKELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0181353_105942923300022179Freshwater LakeMKTSWWYESGMAAEAARELVWFVVIVFVGIGLLIWNDIKKDKRDGKK
Ga0181353_107769533300022179Freshwater LakeMKTSWWIDSGAAAQAAHELMWFVVLVVVGIGVVIWFDMRNDK
Ga0181353_110786733300022179Freshwater LakeYESGAAAQAAHELVWFVVLVVVGIGVVIWRDIRNEKKEKKDD
Ga0181353_111456633300022179Freshwater LakeMKTSWWIDSGMASQAAHELMWFVIIVVVGIGVVIW
Ga0181353_112317823300022179Freshwater LakeMKTSWWYESGLAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGI
Ga0181353_113975113300022179Freshwater LakeMKTNWWIDSGMASQAAHELVWFVVIVVVGIGVVIWLDIRNDK
Ga0181353_115616413300022179Freshwater LakeMKTNWWIDSGMASQAAHELVWFVVIVVIGIGVVIWLDMRKDK
Ga0181354_111231643300022190Freshwater LakeMKTSWWYESGLAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHNDGI
Ga0255156_108001923300026478FreshwaterMSDQWWVQSGMAAQAAKELWWFVVLVYIGIGIAIWRDK
Ga0208974_100989423300027608Freshwater LenticMKTAWWYESGAAAQAAQELVWFVVIVVVGIGVMAWRDMRKEKPKRKEHNDGI
Ga0208975_116521743300027659Freshwater LenticMKTTWWYESGLAAQAAQELMWFVVIVVVGIGVMAWRDMRKEKPK
(restricted) Ga0247833_104931683300027730FreshwaterMKTSWWYESGMAAAAAQELVWFVVACFILIGVAIWLDMRK
Ga0209593_1012902723300027743Freshwater SedimentMKTVWWIESGMAAQAAQELVWFVVLVFVGIGLVIWHDIRKEKPKPKRKEHNNGL
Ga0209358_1027100033300027804Freshwater LakeMKTNWWIESGYAAEAARELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0209358_1048918523300027804Freshwater LakeMKTVWWYESGLAAQAAQELVWFVVIVVVGIGVMAWRDMRKEKPKRKEHNDGL
Ga0209668_1109875913300027899Freshwater Lake SedimentMKTNWWIESGAASQAAHELMWFVVLVVVGIGVVIWFDMRNDK
(restricted) Ga0247834_123817433300027977FreshwaterMKTSWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGI
Ga0247723_101462343300028025Deep Subsurface SedimentMKTSWWYESGMAAEAAQGLVWFVVIVFVGIGLFIWNDIRKDKRDGKK
Ga0247723_105496813300028025Deep Subsurface SedimentMKTNWWIESGAAAQAAQGLVWFVVLVVVGIGVVIWLDMRKDK
(restricted) Ga0247835_113080943300028114FreshwaterMKTSWWYESGMAAAAAQELVWFVVACFILIGVAIWLDM
(restricted) Ga0247835_123000913300028114FreshwaterMKTNWWVDSGMAAQAAQELVWFVVIVVVGIGVVIWLDMRKDK
(restricted) Ga0247831_106501713300028559FreshwaterMKTSWWYDSGMAAQAAQELVWFVVIVFVGIGLLIWRDMKKEGKQQD
(restricted) Ga0247843_102129143300028569FreshwaterMKTSWWYESGMAAAAAQELVWFVVFCFILIGVAIWLDMRK
(restricted) Ga0247843_104758443300028569FreshwaterMKTSWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGI
Ga0315907_1007962343300031758FreshwaterMKTNWWIDSGMAAQAAHELVWFVVLVVVGIGVVIWLDIRKDK
Ga0315907_1013535783300031758FreshwaterMKTSWWYESGMAAEAAQELVWFVVIVFVGIGLLIWNDIRKDKRDGKK
Ga0315907_1025067733300031758FreshwaterMKTSWWYESGAAAQAAQELVWFVVLVFVGIGLVIWHDIRKEKPKPKRKEHNNGL
Ga0315907_1095476223300031758FreshwaterMKTSWWYESGAAAQAAQELVWFVVLVVVGIGVVIWRDIRNEKKEKKDD
Ga0315907_1114050923300031758FreshwaterMKTSWWIESGYAAEAAKELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0315900_1029820743300031787FreshwaterIEMKTSWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMKKEKPKRKEHKDGI
Ga0315900_1087509613300031787FreshwaterMKTNYWYDSGLAAQAAQELVWFVVIVFVGIGLLAWRDIRNEA
Ga0315909_1002225173300031857FreshwaterMKTNWWIDSGMASQAAHELMWFVIIVVVGIGVVIWLDMRKDK
Ga0315909_1005161033300031857FreshwaterMKTNWWIDSGMASQAAHELVWFVVLVVVGIGVVIWLDIRNDK
Ga0315909_1011422963300031857FreshwaterMKTNWWIDSGMAAQAAQELVWFVVIVVVGIGVVIWLDIRKDK
Ga0315909_1027675533300031857FreshwaterMKTAWWYESGMAAQAAQELMWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGL
Ga0315909_1030320743300031857FreshwaterMKTSWWYESGAAAQAAQELVWFVVLVVVGIGVVIWRDMRNEKKEKKDD
Ga0315909_1045332923300031857FreshwaterMKTAWWYESGAAAQAAHELVWFVVLVVVGIGVVIWRDIRNEKKEKKDD
Ga0315909_1079673423300031857FreshwaterMKTNWWIESGAAAQAAQELVWFVVLVIVGIGVVIWLDMRKDK
Ga0315904_1026914733300031951FreshwaterMKTNWWIESGMASQAAHELVWFVVLVFVGIGVLIWHDIRKEDKPKRKRGE
Ga0315904_1064003313300031951FreshwaterKGGEMKTNWWIDSGMASQAAHELVWFVVLVVVGIGVVIWLDIRNDK
Ga0315904_1088597313300031951FreshwaterMKTAWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGL
Ga0315904_1101201213300031951FreshwaterMKTAWWYESGAAAQAAHELVWFVVLVVVGIGVVIWRDIRNEKKERKDD
Ga0315904_1140885733300031951FreshwaterMKTNWWIDSGMASQAAHELVWFVVIVVIGIGVVIWLDI
Ga0315906_1071347813300032050FreshwaterMKTSWWYESGAAAQAAQELVWFVVLVFVGIGVVIWHDIRKEKPKPKRKEHNNGL
Ga0334986_0056197_114_2423300034012FreshwaterMKTSWWIESGMAAQAAQELMWFVVLVVVGIGVVIWFDMRNDK
Ga0334986_0094709_778_9003300034012FreshwaterMKTSWWYESGAASEAARELAWFVVFCIILIGVAIWLDMRK
Ga0334995_0388987_438_5663300034062FreshwaterMKTSWWIESGAASQAAHELMWFVVIVVVGVGVVIWLDMRNDK
Ga0335028_0625620_383_5293300034071FreshwaterMKTAWWYESGAAAQAAQELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0335010_0462276_569_6763300034092FreshwaterEAARELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0335010_0586027_1_1053300034092FreshwaterMKTSWWYESGAAAQAAQELVWFVVLIVVGIGVVIW
Ga0335025_0589325_99_2453300034096FreshwaterMKTAWWYESGYAAEAAKELVWFVVLIVVGIGVVIWRDMRNEKKEKKDD
Ga0335027_0724687_482_5863300034101FreshwaterMKTNWWIESGLAAQAAQDLVWFIVLVFVGIGLLIW
Ga0335027_0754511_201_3533300034101FreshwaterMKTVWWVESGMASEAAHELMWFVVLVFVGIGVLIWHDIKKEDKPNRKRGE
Ga0335036_0429116_263_3913300034106FreshwaterMKTNWWVESGMAAQAAQELVWFVVIVVVGIGVVIWLDMRKDK
Ga0335051_0031004_2227_23853300034109FreshwaterMKTTWWYESGMAAQAAQELVWFVVIVVVGIGVMAWRDMQKEKPKRKEHKDGI
Ga0335063_0589611_3_1193300034111FreshwaterMKTSWWYESGAASEAARELAWFVLFCIILIGVAIWLDMR
Ga0335066_0209889_1_1173300034112FreshwaterMKTSWWYESGAASEAAHELVWFVLFCIILIGVAIWLDMR
Ga0335039_0646477_331_4773300034355FreshwaterMKTAWWYESGAAAQAAHELVWFVVLVVVGIGVVIWRDIRKEKKERKDD


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