Metagenome Family F065538

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065538
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	92 residues
Representative Sequence	MKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Number of Associated Samples	97
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.31 %
% of genes near scaffold ends (potentially truncated)	29.92 %
% of genes from short scaffolds (< 2000 bps)	85.83 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (49.606 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (15.748 % of family members)
Environment Ontology (ENVO)	Unclassified (44.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 30.25% Coil/Unstructured: 57.98%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF08450	SGL	10.24
PF00719	Pyrophosphatase	8.66
PF13714	PEP_mutase	7.09
PF13458	Peripla_BP_6	4.72
PF02775	TPP_enzyme_C	4.72
PF00072	Response_reg	3.94
PF05977	MFS_3	3.15
PF03960	ArsC	2.36
PF10604	Polyketide_cyc2	1.57
PF02668	TauD	1.57
PF13602	ADH_zinc_N_2	1.57
PF00892	EamA	1.57
PF01575	MaoC_dehydratas	0.79
PF02653	BPD_transp_2	0.79
PF00920	ILVD_EDD	0.79
PF13378	MR_MLE_C	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	10.24
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	10.24
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	8.66
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	3.15
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	2.36
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.57
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.76 %
Unclassified	root	N/A	47.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.76 %
Unclassified	root	N/A	47.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.61 %
Unclassified	root	N/A	47.24 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.22 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	3.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.24 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.15 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	3.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.24 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	3.15 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	3.15 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.15 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.15 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	3.15 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3.15 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.57 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.79 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.24 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	3.15 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.15 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3.15 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.57 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.79 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.24 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	3.15 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.15 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3.15 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.57 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.79 %
Betaproteobacteria bacterium 13_1_20CM_3_63_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	0.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101572837	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1888	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101574631	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1568	Open in IMG/M
3300002568\|C688J35102_118482949	Not Available	564	Open in IMG/M
3300004463\|Ga0063356_100162876	All Organisms → cellular organisms → Bacteria → Proteobacteria	2566	Open in IMG/M
3300005165\|Ga0066869_10042949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300005295\|Ga0065707_10725193	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005330\|Ga0070690_100801011	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005331\|Ga0070670_100387327	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300005332\|Ga0066388_100678385	All Organisms → cellular organisms → Bacteria → Proteobacteria	1641	Open in IMG/M
3300005334\|Ga0068869_100312492	Not Available	1272	Open in IMG/M
3300005336\|Ga0070680_100182412	Not Available	1768	Open in IMG/M
3300005338\|Ga0068868_100023324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4682	Open in IMG/M
3300005341\|Ga0070691_10442946	Not Available	740	Open in IMG/M
3300005344\|Ga0070661_100785592	Not Available	780	Open in IMG/M
3300005434\|Ga0070709_11798702	Not Available	501	Open in IMG/M
3300005457\|Ga0070662_101268540	Not Available	634	Open in IMG/M
3300005539\|Ga0068853_100326776	Not Available	1423	Open in IMG/M
3300005539\|Ga0068853_101606240	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005544\|Ga0070686_101814846	Not Available	519	Open in IMG/M
3300005545\|Ga0070695_100343343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1116	Open in IMG/M
3300005549\|Ga0070704_100946696	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005563\|Ga0068855_100025136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7130	Open in IMG/M
3300005842\|Ga0068858_100462653	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1223	Open in IMG/M
3300006804\|Ga0079221_11257663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	579	Open in IMG/M
3300006847\|Ga0075431_100208689	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300006904\|Ga0075424_101311155	Not Available	770	Open in IMG/M
3300006954\|Ga0079219_10606087	Not Available	803	Open in IMG/M
3300009094\|Ga0111539_12769126	Not Available	568	Open in IMG/M
3300009098\|Ga0105245_12127471	Not Available	615	Open in IMG/M
3300009148\|Ga0105243_11975072	Not Available	617	Open in IMG/M
3300009177\|Ga0105248_10919589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium 13_1_20CM_3_63_8	988	Open in IMG/M
3300009177\|Ga0105248_12644731	Not Available	572	Open in IMG/M
3300010043\|Ga0126380_10573272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	883	Open in IMG/M
3300010047\|Ga0126382_12245766	Not Available	526	Open in IMG/M
3300010359\|Ga0126376_10139957	All Organisms → cellular organisms → Bacteria → Proteobacteria	1921	Open in IMG/M
3300010362\|Ga0126377_10860720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300010375\|Ga0105239_12464798	Not Available	606	Open in IMG/M
3300010399\|Ga0134127_13114288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300010400\|Ga0134122_12264113	Not Available	588	Open in IMG/M
3300012212\|Ga0150985_102274171	Not Available	594	Open in IMG/M
3300012212\|Ga0150985_106130003	All Organisms → cellular organisms → Bacteria → Proteobacteria	1716	Open in IMG/M
3300012469\|Ga0150984_104388890	Not Available	696	Open in IMG/M
3300012469\|Ga0150984_110295422	Not Available	741	Open in IMG/M
3300012469\|Ga0150984_120290815	Not Available	890	Open in IMG/M
3300012685\|Ga0137397_10959308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300012948\|Ga0126375_11123532	Not Available	649	Open in IMG/M
3300012948\|Ga0126375_11590807	Not Available	562	Open in IMG/M
3300012988\|Ga0164306_12027485	Not Available	500	Open in IMG/M
3300012989\|Ga0164305_10472570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	979	Open in IMG/M
3300013100\|Ga0157373_11466120	Not Available	520	Open in IMG/M
3300013296\|Ga0157374_12139289	Not Available	586	Open in IMG/M
3300013297\|Ga0157378_10957939	Not Available	889	Open in IMG/M
3300014968\|Ga0157379_10964098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	812	Open in IMG/M
3300014969\|Ga0157376_10656457	Not Available	1050	Open in IMG/M
3300015371\|Ga0132258_10063940	All Organisms → cellular organisms → Bacteria → Proteobacteria	8495	Open in IMG/M
3300015371\|Ga0132258_10782377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2405	Open in IMG/M
3300015371\|Ga0132258_10971918	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300015371\|Ga0132258_12648231	Not Available	1252	Open in IMG/M
3300017939\|Ga0187775_10031538	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300017959\|Ga0187779_10016170	All Organisms → cellular organisms → Bacteria → Proteobacteria	4254	Open in IMG/M
3300017959\|Ga0187779_10052282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2384	Open in IMG/M
3300017959\|Ga0187779_10091616	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300017961\|Ga0187778_10183443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1329	Open in IMG/M
3300018029\|Ga0187787_10469541	Not Available	510	Open in IMG/M
3300018032\|Ga0187788_10039535	Not Available	1574	Open in IMG/M
3300018060\|Ga0187765_10771632	Not Available	638	Open in IMG/M
3300018064\|Ga0187773_10008633	All Organisms → cellular organisms → Bacteria → Proteobacteria	4217	Open in IMG/M
3300018078\|Ga0184612_10494995	Not Available	598	Open in IMG/M
3300018476\|Ga0190274_13141421	Not Available	555	Open in IMG/M
3300019360\|Ga0187894_10123832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1347	Open in IMG/M
3300021088\|Ga0210404_10405675	Not Available	762	Open in IMG/M
3300022561\|Ga0212090_10603458	Not Available	719	Open in IMG/M
3300024347\|Ga0179591_1167262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2684	Open in IMG/M
3300025901\|Ga0207688_10687084	Not Available	647	Open in IMG/M
3300025901\|Ga0207688_11027836	Not Available	520	Open in IMG/M
3300025911\|Ga0207654_10398577	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300025927\|Ga0207687_10287327	Not Available	1320	Open in IMG/M
3300025927\|Ga0207687_11025123	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300025932\|Ga0207690_11659094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300025938\|Ga0207704_11541523	Not Available	570	Open in IMG/M
3300025942\|Ga0207689_10607191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	920	Open in IMG/M
3300026035\|Ga0207703_10422007	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1241	Open in IMG/M
3300026067\|Ga0207678_11082878	Not Available	710	Open in IMG/M
3300028379\|Ga0268266_10798799	Not Available	911	Open in IMG/M
3300028380\|Ga0268265_10673227	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300028381\|Ga0268264_10569405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300031226\|Ga0307497_10388048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	664	Open in IMG/M
3300031720\|Ga0307469_10278778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300031720\|Ga0307469_11758340	Not Available	598	Open in IMG/M
3300031740\|Ga0307468_101369808	Not Available	648	Open in IMG/M
3300031820\|Ga0307473_10362626	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300031854\|Ga0310904_11065230	Not Available	578	Open in IMG/M
3300032000\|Ga0310903_10344631	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032012\|Ga0310902_11087757	Not Available	559	Open in IMG/M
3300032059\|Ga0318533_10598852	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300032075\|Ga0310890_11288857	Not Available	597	Open in IMG/M
3300032174\|Ga0307470_11185764	Not Available	619	Open in IMG/M
3300032180\|Ga0307471_100030341	All Organisms → cellular organisms → Bacteria → Proteobacteria	4155	Open in IMG/M
3300032180\|Ga0307471_102829470	Not Available	616	Open in IMG/M
3300032180\|Ga0307471_104341974	Not Available	501	Open in IMG/M
3300032205\|Ga0307472_100999130	Not Available	784	Open in IMG/M
3300032205\|Ga0307472_101940417	Not Available	588	Open in IMG/M
3300032770\|Ga0335085_10139758	All Organisms → cellular organisms → Bacteria → Proteobacteria	3057	Open in IMG/M
3300032770\|Ga0335085_10602513	Not Available	1236	Open in IMG/M
3300032770\|Ga0335085_10794902	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300032770\|Ga0335085_10880600	Not Available	978	Open in IMG/M
3300032783\|Ga0335079_10901490	Not Available	908	Open in IMG/M
3300032783\|Ga0335079_11035741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	835	Open in IMG/M
3300032828\|Ga0335080_11040416	Not Available	832	Open in IMG/M
3300032829\|Ga0335070_10758889	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300032893\|Ga0335069_10903380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	987	Open in IMG/M
3300032893\|Ga0335069_11234776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	817	Open in IMG/M
3300032897\|Ga0335071_10567525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300032955\|Ga0335076_10396286	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300032955\|Ga0335076_11236167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	631	Open in IMG/M
3300033004\|Ga0335084_10089296	All Organisms → cellular organisms → Bacteria → Proteobacteria	3197	Open in IMG/M
3300033004\|Ga0335084_10160430	Not Available	2339	Open in IMG/M
3300033004\|Ga0335084_10484487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1271	Open in IMG/M
3300033004\|Ga0335084_12456171	Not Available	501	Open in IMG/M
3300033158\|Ga0335077_10004422	All Organisms → cellular organisms → Bacteria	17136	Open in IMG/M
3300033433\|Ga0326726_10192990	All Organisms → cellular organisms → Bacteria → Proteobacteria	1877	Open in IMG/M
3300033433\|Ga0326726_10734896	Not Available	953	Open in IMG/M
3300033433\|Ga0326726_10905301	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300033480\|Ga0316620_10020916	All Organisms → cellular organisms → Bacteria → Proteobacteria	3910	Open in IMG/M
3300033480\|Ga0316620_10038249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3142	Open in IMG/M
3300033803\|Ga0314862_0045240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	940	Open in IMG/M
3300033806\|Ga0314865_011344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2204	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.57%
Host-Associated	Host-Associated	35.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.99%
Plants	Host-Associated → Plants	35.43%
Aquatic	Environmental → Aquatic	1.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.75%
Peat	Environmental → Terrestrial → Peat	2.36%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Sediment	Environmental → Aquatic → Sediment	0.79%
Cave	Environmental → Terrestrial → Cave	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.02%
Loam	Environmental → Terrestrial → Soil → Loam	7.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.36%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	24.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.57%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.15%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.15%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.15%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.15%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.36%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.57%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015728373	3300000364	Soil	MKLFRDIGKRVHRVEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASRDDTDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR*
INPhiseqgaiiFebDRAFT_1015746312	3300000364	Soil	MKLFRDIGKRVHRVEVPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASREDIDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR*
C688J35102_1184829492	3300002568	Soil	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLRWAEPVASGASREDTESSVVWTVVTNALYRGTQVRVRIDDTTGHLLEVRKTIR*
Ga0063356_1001628762	3300004463	Arabidopsis Thaliana Rhizosphere	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVFS*
Ga0066869_100429491	3300005165	Soil	MKLFRDSGKRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDTTG
Ga0065707_107251932	3300005295	Switchgrass Rhizosphere	MKLFRDSGKRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDESESVVVWTVVTNALRRGAHVRVRIDDTTGNTIEVEKVVI*
Ga0070690_1008010112	3300005330	Switchgrass Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGMQVRVRIDDSTGHLLEVRKTIR*
Ga0070670_1003873272	3300005331	Switchgrass Rhizosphere	MKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQMLEVRRTIR*
Ga0066388_1006783851	3300005332	Tropical Forest Soil	MKLFGDSRRRVRRIEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDDADSVVVWTVMTNALHSGLHVRVQIDDITGNTLDVRNVVR*
Ga0068869_1003124921	3300005334	Miscanthus Rhizosphere	MKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0070680_1001824121	3300005336	Corn Rhizosphere	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVF
Ga0068868_1000233242	3300005338	Miscanthus Rhizosphere	MKLFGDKRFHHVEAPVVTYLGREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNVLNRGTQVRVRIDDITGQTLEVRRTIR*
Ga0070691_104429461	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSMKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGMQVRVRIDDSTGHLLEVRKTIR*
Ga0070661_1007855922	3300005344	Corn Rhizosphere	AHTVNGCAQGSTPSRREACSNMKLFGDSKRVQHIEAPVVTYLSREEAIGLAHLATEGAGLSWAEPVAAGAQREEIDSHVVWTVVTNALYRGTQVRVRIDDTTGTTLEVRKTIR*
Ga0070709_117987021	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEVDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0070662_1012685401	3300005457	Corn Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGTQVRVRIDDSTGHLLEVRKTIR*
Ga0068853_1003267761	3300005539	Corn Rhizosphere	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNT
Ga0068853_1016062401	3300005539	Corn Rhizosphere	MKLFGDKRFHHVEASVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTT
Ga0070686_1018148461	3300005544	Switchgrass Rhizosphere	MKLFGDSKRVQHIEAPVVTYLSREEAIGLAHLATEGAGLSWAEPVAAGAQREEIDSHVVWTVVTNALYRGTQVRVRIDDTTGTTL
Ga0070695_1003433433	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	EAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVFS*
Ga0070704_1009466962	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDD
Ga0068855_1000251361	3300005563	Corn Rhizosphere	DHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVFS*
Ga0068858_1004626532	3300005842	Switchgrass Rhizosphere	LHMSQGGSFMKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0079221_112576631	3300006804	Agricultural Soil	AGKRVHYIEAPVATYLSREEAIGLAHLATEEAGLRWAEPVAAGASRDERDDHVVWTVVTNALYRGTQVRVRIDDTTGHTLEVRKTIR*
Ga0075431_1002086891	3300006847	Populus Rhizosphere	MKLFRDTRKHEHRVEAPVATYLTREEAIGLAHLATEHAGLRWDEPIAAGAARDEAQSGVVWTVVTNALNRGTRVRVRIDDSTGGTLEIRKVLR*
Ga0075424_1013111552	3300006904	Populus Rhizosphere	MKLFGDKRVHHVEAPVATYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEVDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0079219_106060872	3300006954	Agricultural Soil	MKLFGDKRVHHVEAPVATYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0111539_127691261	3300009094	Populus Rhizosphere	SIPMKLFRDNSKRVRRVEAPVMTYLSREEAIGLAHLATEDAGLSWAEPVAAGASREDTESSVVWTVVTNALNRGTQVRVRIDDTTGHLLEVRKTIR*
Ga0105245_121274711	3300009098	Miscanthus Rhizosphere	MKLFGDSKRVQHIEAPVVTYLSREEAIGLAHLATEGAGLSWAEPVAAGAQREEIDSHVVWTVVTNALNRGTQVRVRIDDTTGTTLEVRKTIR*
Ga0105243_119750721	3300009148	Miscanthus Rhizosphere	ISQGGSFMKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0105248_109195892	3300009177	Switchgrass Rhizosphere	CSNMKLFGDSKRVQHIEAPVVTYLSREEAIGLAHLATEGAGLSWAEPVAAGAQREEIDSHVVWTVVTNALYRGTQVRVRIDDTTGTTLEVRKTIR*
Ga0105248_126447311	3300009177	Switchgrass Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGMQVR
Ga0126380_105732722	3300010043	Tropical Forest Soil	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQLATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGIHVRIQIDDSTGNTLDVRNVVR*
Ga0126382_122457661	3300010047	Tropical Forest Soil	MKLFRDLGKRVHRIEAPVVTYLSREEAIGLAHLATEDAGLRWAEPVAAGASREDADSHVVWTIVTNALNRGTQVRVRIDDSTGHT
Ga0126376_101399572	3300010359	Tropical Forest Soil	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDDADSVVVWTVMTNALHSGLHVRVQIDDITGNTLDVRNVVR*
Ga0126377_108607202	3300010362	Tropical Forest Soil	MKLFGDSARRVRRVEAPVVTYLSREEAIGLAQLATESAGLRWTEPVSAGASRDEADSVVVWTVMTNALNSGVHVRIQIDDSTGNTLDVRNVVR*
Ga0105239_124647981	3300010375	Corn Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGAWREDTESTVVWTVVTNALNRGMQVRVRIDDSTGHLLEVRKTIR*
Ga0134127_131142882	3300010399	Terrestrial Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRR
Ga0134122_122641132	3300010400	Terrestrial Soil	MKFFRNSRKQKIHQIEAPVVTYLSREEAIGLAHLATETAGMRWAEPIAAGARREEVDSTVVWTVVTNALHRGMQVRVRIDDSTGNTLDVRRVLG*
Ga0150985_1022741711	3300012212	Avena Fatua Rhizosphere	MKLFRDNNKRVQRMEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGTQVRVRIDDSTGHLLEVRKTIR*
Ga0150985_1061300031	3300012212	Avena Fatua Rhizosphere	VEAPVMTYLSREEAIGLAHLATEDAGLRWAEPVAAGASREDTESSVVWTVVTNALYRGTQVRVRIDDTTGHLLEVRKTIR*
Ga0150984_1043888901	3300012469	Avena Fatua Rhizosphere	MKLFRDHSKRVQRVEAPVMTYLSREEAIGLAQIATEGAGLTWAEPVAAGASREDTESSMVWTVVTNALNRGTQVRVRIDDTTGHLLEVRKTIR*
Ga0150984_1102954222	3300012469	Avena Fatua Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLRWAEPVAAGASREDTESSVVWTVVTNALYRGTQVRVRIDDTTGHLLEVRKTIR*
Ga0150984_1202908152	3300012469	Avena Fatua Rhizosphere	MSFRLYTECAKLISLTLHISQGGLAMKLFGDKRVHHVEAPVATYLSREEAIGLAHVATEGAGLRWDEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0137397_109593081	3300012685	Vadose Zone Soil	MKLFRDSGRHVHRVETPVVTYLSREEAIGLAQLATETAGLRWDEPISAGARRDEAESIVVWTVVTNALRRGAHVRVRIDDTTGNTIEVEKVVI*
Ga0126375_111235322	3300012948	Tropical Forest Soil	MKLFGDSRRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDEADSVVVWTVMTNALHSGLHVRVQIDDITGNTLDVRNVVR*
Ga0126375_115908072	3300012948	Tropical Forest Soil	PVVTYLSREEAIGLAHLATEDAGLRWAEPVAAGASREDADSHVVWTIVTNALNRGTQVRVRIDDSTGHTLDIRRTIR*
Ga0164306_120274852	3300012988	Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDESDSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVFS*
Ga0164305_104725703	3300012989	Soil	KLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGMQVRVRIDDSTGHLLEVRKTIR*
Ga0157373_114661201	3300013100	Corn Rhizosphere	QMKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVFS*
Ga0157374_121392891	3300013296	Miscanthus Rhizosphere	MKLFRDHRKRIDHVEAPVVTYLSREDAIVLAHLATESAGLRWAEPIAAGARRDESDSTVVWTVVTNALDRGTKVHVRIDDSTGNTLEVRRVFS*
Ga0157378_109579392	3300013297	Miscanthus Rhizosphere	MKLVRDNDKRVQRVEAPVMTYMSREEAIGLAHLATEEAGLSWAEPVAAGASREDTESTVVWTVVTNALNRGTQVRVRIDDSTGHLLEVRKTIR*
Ga0157379_109640982	3300014968	Switchgrass Rhizosphere	MKLFRDSGKHVHRVETPVVTYLSREEAIGLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDITGNTIEVEKVVI*
Ga0157376_106564572	3300014969	Miscanthus Rhizosphere	MKLFGDSKRVQHIEAPVVTYLSREEAIGLAHLATEGAGLSWAEPVAAGAQREEIDSHVVWTVVTNALYRGTQVRVRIDDTTGTTLEVRKTIR*
Ga0132258_100639404	3300015371	Arabidopsis Rhizosphere	MKLFRDNRKRVHRIDAPVVTYLSREEAIGLAHLATEGAGLRWDEPVASGASRDEAASAVVWTVVTNALNRGAQVRVRIDDTTGTTLEVRKVF*
Ga0132258_107823772	3300015371	Arabidopsis Rhizosphere	MKLFWDKRVHRVEAPVVTYLSREEAIGLAHVATEDAGLHWNEPVAAGASREDTGSNVVWTVVTNALNKGTQVRVRIDDTTGHTLEVRRTIR*
Ga0132258_109719182	3300015371	Arabidopsis Rhizosphere	MRGGDMKLFRDSGKRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDITGNTIEVEKVVI*
Ga0132258_126482311	3300015371	Arabidopsis Rhizosphere	MKLFGDKRVHHIEAPVATYLSREEASGLAHVATEGAGLRWAEPVAAGAAREEIDSHVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR*
Ga0187775_100315382	3300017939	Tropical Peatland	MKLFRDTGKHVHRVETAVVTYLSREEAISLAQLATETAGFRWDEPVAAGFKREDSESAVVWTVVTNAMRKGAHVRVLIDDSTGSTIEVQKVVM
Ga0187779_100161703	3300017959	Tropical Peatland	MKLFRDTGKRIHSVETPVATYLSREEAIGIAQLATETAGLRWDEPIAAGFKREDSEPGVVWTVVTNAMRRGAHVRVRIDDSTGNTIEVQKVVM
Ga0187779_100522821	3300017959	Tropical Peatland	RVEAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDTTGNTLDVRNVVR
Ga0187779_100916164	3300017959	Tropical Peatland	MKLFGDNRRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDTTGNTLDVRNVVR
Ga0187778_101834432	3300017961	Tropical Peatland	MKLFGDNRRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDITGNTLDVRNVVR
Ga0187787_104695411	3300018029	Tropical Peatland	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDITGNTLDVRSVVR
Ga0187788_100395352	3300018032	Tropical Peatland	MTLFRDTGKHVHRVETAVVTYLSREEAISLAQLATETAGFRWDEPVAAGFKREDSESAVVWTVVTNAMRKGAHVRVLIDDSTGSTIEVQKVVM
Ga0187765_107716322	3300018060	Tropical Peatland	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNVVR
Ga0187773_100086332	3300018064	Tropical Peatland	MKLFRDTGKHVHRVETPVVTYLSREEAISLAQLATETAGFRWDEPVAAGFKREDSESAVVWTVVTNAMRKGAHVRVLIDDSTGSTIEVQKVVM
Ga0184612_104949951	3300018078	Groundwater Sediment	MKLFRDIGKRAHRIEAPVITYLSREEAIGLAQVATEDAGLRWDEPVAAGASREDTESNVVWTVVTNALNRGAQVRVRIDDTTGQTLEVRRTIR
Ga0190274_131414211	3300018476	Soil	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESSVVWTVVTNALNRGTQVRVRIDDSTGHLLEVRKTIR
Ga0187894_101238322	3300019360	Microbial Mat On Rocks	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIEDSTGNTLDVRNIVR
Ga0210404_104056752	3300021088	Soil	MKLFRDSGKHVHRVETPVVTYLSREEAIGLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDITGNTIEVEKVVI
Ga0212090_106034582	3300022561	Glacier Valley	MKLFRDPAKRVQHVEAPVVTYLSREEAIGLAHLATEHAGMHWDEPVAAGASHDEAESAVVWTVVTNALYRGTQIRVRIDDSTGNTIEVRKTLR
Ga0179591_11672623	3300024347	Vadose Zone Soil	MKLFRDSQKQIHRVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEVDSTVVWTVVTNALHRGQQIRVRIDDTTGNTLDVRRTQGF
Ga0207688_106870841	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Ga0207688_110278361	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGMQVRVRIDDSTGHLLEVRKT
Ga0207654_103985772	3300025911	Corn Rhizosphere	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDITGNTLEVRRVFS
Ga0207687_102873272	3300025927	Miscanthus Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGTQVRVRIDDSTGHLLEVRKTIR
Ga0207687_110251231	3300025927	Miscanthus Rhizosphere	MKLFGDSKRVQHIEAPVVTYLSREEAIGLAHLATEGAGLSWAEPVAAGAQREEIDSHVVWTVVTNALYRGTQVRVRIDDTTGTTLEV
Ga0207690_116590941	3300025932	Corn Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGTQVRVRIDDSTGHLL
Ga0207704_115415231	3300025938	Miscanthus Rhizosphere	VEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Ga0207689_106071913	3300025942	Miscanthus Rhizosphere	SVSMKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGTQVRVRIDDSTGHLLEVRKTIR
Ga0207703_104220071	3300026035	Switchgrass Rhizosphere	LHMSQGGSFMKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Ga0207678_110828781	3300026067	Corn Rhizosphere	RLHISQGGSFMKLFGDKRFHHVEAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Ga0268266_107987991	3300028379	Switchgrass Rhizosphere	MKLFRDNNKRVQRVEAPVMTYLSREEAIGLAHLATEDAGLNWAEPVAAGASREDTESTVVWTVVTNALNRGMQVRVRIDDSTGHLLEVRKTIR
Ga0268265_106732272	3300028380	Switchgrass Rhizosphere	MKLFGDKRFHHVDAPVVTYLSREEAIGLAHVATEGAGLRWAEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Ga0268264_105694051	3300028381	Switchgrass Rhizosphere	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVYVRIDDITGNTLEVRRVFS
Ga0307497_103880482	3300031226	Soil	MKLFRDDRKRVHRIDAPVVTYLSREEAIGLAHLATEGAGLRWDEPVASGASRDEAASAVVWTVVTNALNRRAQVRVRIDDTTGTTLEVRKVF
Ga0307469_102787782	3300031720	Hardwood Forest Soil	MKLFRDSGKRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDESESIVVWTVVTNALRRGAHVRVRIDDTTGNTIEVEKVVI
Ga0307469_117583402	3300031720	Hardwood Forest Soil	MKLFRDSGKHVHRIETPVVTYLSREEAIGLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDITGNTIEVEKVVI
Ga0307468_1013698081	3300031740	Hardwood Forest Soil	MKLFRDIGKRVHRVEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASRDDTDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0307473_103626262	3300031820	Hardwood Forest Soil	MKLFGDSGRHVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASCDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNIVR
Ga0310904_110652301	3300031854	Soil	MKFFRNSRKQKIHQIEAPVVTYLSREEAIGLAHLATETAGMRWAEPIAAGARREEVDSTVVWTVVTNALHRGMQVRVRIDDSTGNTLDVRRVLG
Ga0310903_103446312	3300032000	Soil	MKLFRDSGKRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDITGNTIEVEKVVI
Ga0310902_110877571	3300032012	Soil	MKLFGDKRVHHVEAPVATYLSREEAIGLAHVATEGAGLRWDEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTVR
Ga0318533_105988521	3300032059	Soil	MKLFGDNRRRVRRVDAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNVVR
Ga0310890_112888571	3300032075	Soil	DKRVHHVEAPVATYLSREEAIGLAHVATEGAGLRWDEPVAAGASREEIDSQVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTVR
Ga0307470_111857641	3300032174	Hardwood Forest Soil	SMRGGDMKLFRDSGKHVHRIETPVVTYLSREEAIGLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDITGNTIEVEKVVI
Ga0307471_1000303414	3300032180	Hardwood Forest Soil	MKLFRDSGKRVHRVETPVVTYLSREEAIGLAQVATETAGLRWDEPISAGARRDESESVVVWTVVTNALRRGAHVRVRIDDTTGNTIEVEKVVI
Ga0307471_1028294701	3300032180	Hardwood Forest Soil	MKLFGDSGRHVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNIVR
Ga0307471_1043419741	3300032180	Hardwood Forest Soil	RPVQMKLFRDIGKRVHRVEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASREDIDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0307472_1009991302	3300032205	Hardwood Forest Soil	MKLFRDIGKRVHRVEVPVVTYLSREEAIGLAQVATEEAGLRWAEPIAAGASREDIDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0307472_1019404171	3300032205	Hardwood Forest Soil	MKLFRDSGRRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDTTGNTIEVEKVVI
Ga0335085_101397582	3300032770	Soil	MKLFGDNRRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNVVR
Ga0335085_106025132	3300032770	Soil	MKLFRDSGKHVHRVETPVVTYLSREEAIGLAQVATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDD
Ga0335085_107949021	3300032770	Soil	MKLFRDIGKRVHRVEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASREASDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0335085_108806002	3300032770	Soil	MKLFRDTGKRVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPVAAGFKREESESAVVWTVVTNAMRKGAHVRVRIDDSTGSTIEVQKVVM
Ga0335079_109014901	3300032783	Soil	MKLFRDTGKRVHEIKAPVVTSLSREEAIGLAHLAAESAGLNWDGAVAAGATRDEAESSPVWTVVTNALHRGVHVRVQIDDTTGDTLDCRRVVI
Ga0335079_110357412	3300032783	Soil	MKLFRDSGKHVHRVETPVVTYLSREEAIGLAQVATETAGLRWDEPISAGARRDETESVVVWTVVTNALRRGAHVRVRIDDVTGNTIEVEKVVI
Ga0335080_110404161	3300032828	Soil	MKLFRDISKRVHRVEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASREDIDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0335070_107588892	3300032829	Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEADSTVVWTVVTNALDRGTKVHVRIDDTTGNTLEVRRVFS
Ga0335069_109033802	3300032893	Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLAAESAGLRWAEPIAAGARRDEADSAVVWTVVTNALDRGTKVHVRIDDTTGNTLEMRRVFS
Ga0335069_112347762	3300032893	Soil	MKLFRDIGKRVHRVEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASREDIDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0335071_105675251	3300032897	Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLAAESAGLRWAEPIAAGARRDEADSAVVWTVVTNALDRGTKVHVRIDDTTGNTLEVRRVFS
Ga0335076_103962862	3300032955	Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEVDSTVVWTVVTNALDRGTKVHVRIDDTTGNTLDVRRVFS
Ga0335076_112361672	3300032955	Soil	DRVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEVDSAVVWTIVTNALKRGAQVRVRIDDTTGNTLDVRRVLS
Ga0335084_100892963	3300033004	Soil	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWTEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNIVR
Ga0335084_101604301	3300033004	Soil	MKLFRDKRVHHVEAPVVTYLSREEAIGLAHVATEGAGLRWDEPVAAGAAREDADAHVVWTVVTNALNRGTQVRVRIDDTTGQTLEVRRTIR
Ga0335084_104844872	3300033004	Soil	MKLFRDHRKRIDHVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEGDSTVVWTVVTNALDRGTKVHVRIDDTTGNTLEVRRVFS
Ga0335084_124561712	3300033004	Soil	MKLFRDIGKRVHHVEAPVATYLSREEAIGLAHLAAENAGLNWNGPVAAGATRDEAESGVVWTVVTNAMVRGMHVRVQIDDATGGTLDVRRVVI
Ga0335077_100044226	3300033158	Soil	MKLFRDTGRRVHRVETPVVTYLSREEAIGLAQLATETAGLRWDEPVAAGASRDAGQSAVVWTVVTKAMSRGTHVRVRIDDSTGNTIEVGRVVT
Ga0326726_101929902	3300033433	Peat Soil	MKLFRESRKHVHRVETPVVTYLSREEAISLAQLATETAGLRWDEPISAGARRDESESVVVWTVVTNALRRGAHVRVRIDDTTGNTIEVEKVVI
Ga0326726_107348961	3300033433	Peat Soil	MKLFRDIGKRVHRMEAPVVTYLSREEAIGLAHVATEEAGLRWAEPIAAGASREASDANVVWTVVTNALNRGAQIRVRIDDTTGHTLEVRRTIR
Ga0326726_109053011	3300033433	Peat Soil	MKLFRDTGKRIHRVETPVVTYLSREEAISLAQLATETAGLRWDEPVAAGFKREESESAVVWTVVTNAMRKGAHVRVRIDDSTGNTIEVQKVVM
Ga0316620_100209162	3300033480	Soil	MKLFRDSRKRIDRVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEVESTVVWTVVTNALNRGAQVRVRIDDTTGNTLDVRRVLS
Ga0316620_100382494	3300033480	Soil	MKLFRDNRKRIDRVEAPVVTYLSREEAIGLAHLATESAGLRWAEPIAAGARRDEVDSTVVWTVVTNALDRGTKVHVRIDDTTGNTLDVRRVFS
Ga0314862_0045240_1_276	3300033803	Peatland	MKLFGDNRRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWSEPVSAGASRDEADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRNVV
Ga0314865_011344_1664_1945	3300033806	Peatland	MKLFGDSGRRVRRVEAPVVTYLSREEAIGLAQVATESAGLRWAEPVSAGAARDDADSVVVWTVMTNALHSGVHVRVQIDDSTGNTLDVRSLVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065538

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences