Metagenome Family F065535

Basic Information
Family ID	F065535
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	61 residues
Representative Sequence	MTINEQIDSLLSKQKEIDYILATETIKEYLVTWPSNVDSKLWNHRLESLLRKIDEKFERTQK
Number of Associated Samples	76
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	91.34 %
% of genes near scaffold ends (potentially truncated)	19.69 %
% of genes from short scaffolds (< 2000 bps)	81.10 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (86.614 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (39.370 % of family members)
Environment Ontology (ENVO)	Unclassified (77.165 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (77.165 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1FwDRAFT_100390703 2Water_10022221 3Water_10159712 4Ga0075464_100789215 5Ga0102859_11620751 6Ga0102860_11809522 7Ga0114973_105016291 8Ga0114962_101655242 9Ga0114962_102130542 10Ga0114968_100841492 11Ga0114977_100429024 12Ga0114977_102903132 13Ga0114978_100193211 14Ga0114978_101990611 15Ga0114978_103552111 16Ga0114978_107462981 17Ga0114966_104293532 18Ga0114966_104371111 19Ga0114970_100126856 20Ga0114975_1002513310 21Ga0114975_101366023 22Ga0114975_102001343 23Ga0114975_102512784 24Ga0114975_106978603 25Ga0114979_101834472 26Ga0114969_101536375 27Ga0114959_102316823 28Ga0114959_103001365 29Ga0114974_102643811 30Ga0114974_107691911 31Ga0114971_105700013 32Ga0114967_104532242 33Ga0114967_104639463 34Ga0151620_11466982 35Ga0153801_10284433 36Ga0157498_10327872 37Ga0164295_102293453 38Ga0119960_10753182 39Ga0181338_10182692 40Ga0181364_10131915 41Ga0181350_10309401 42Ga0181350_10583771 43Ga0181350_11263822 44Ga0181347_10980962 45Ga0181347_11193442 46Ga0181347_11776123 47Ga0181347_11835641 48Ga0181347_12131583 49Ga0181362_10767502 50Ga0181352_11637151 51Ga0181344_10152515 52Ga0181344_10429954 53Ga0181344_12406711 54Ga0181356_11008722 55Ga0181356_11066033 56Ga0181343_11983641 57Ga0181358_11209713 58Ga0181357_10464925 59Ga0181357_10632322 60Ga0181357_11616031 61Ga0181357_12718491 62Ga0181357_13261421 63Ga0181349_10292911 64Ga0181349_10713213 65Ga0181346_11305372 66Ga0181355_11055433 67Ga0181359_100920711 68Ga0181359_10496305 69Ga0181359_11436083 70Ga0181359_11516132 71Ga0211731_1008824417 72Ga0211731_116059214 73Ga0194048_100003096 74Ga0194048_101405723 75Ga0222713_104448781 76Ga0181353_10417742 77Ga0181354_11087153 78Ga0181354_11780811 79Ga0181351_11117214 80Ga0181351_11177092 81Ga0181351_11471422 82Ga0214921_100210246 83Ga0208916_102230603 84Ga0209297_10262917 85Ga0209297_11089265 86Ga0209087_100062535 87Ga0209087_10592756 88Ga0209087_12634503 89Ga0209190_10522664 90Ga0209597_10164203 91Ga0209084_10412966 92Ga0209596_10391735 93Ga0209596_11737015 94Ga0209596_13380353 95Ga0209296_100401717 96Ga0209296_12103842 97Ga0209088_104107121 98Ga0209086_102134761 99Ga0209086_103729871 100Ga0209500_100645396 101Ga0209500_102244861 102Ga0209353_101212805 103Ga0209400_10279962 104Ga0209400_12840391 105Ga0209191_10360382 106Ga0247723_100329818 107Ga0247723_10154155 108Ga0247723_10415494 109Ga0304730_10941121 110Ga0304730_10965354 111Ga0315291_110487282 112Ga0315293_102649164 113Ga0315293_106838451 114Ga0315297_113059832 115Ga0315294_104977874 116Ga0315294_109414283 117Ga0315274_109456213 118Ga0315289_104978081 119Ga0315289_106335243 120Ga0315284_111105984 121Ga0315277_101809913 122Ga0315295_115134871 123Ga0315268_122164582 124Ga0315286_120552012 125Ga0334987_0548382_1_171 126Ga0335012_0440671_408_596 127Ga0335033_0312233_321_512
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1FwDRAFT_100390703 2Ga0114973_105016291 3Ga0114978_101990611 4Ga0181357_13261421
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1FwDRAFT_100390703 2Ga0114973_105016291 3Ga0114978_101990611 4Ga0181357_13261421
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.87% β-sheet: 0.00% Coil/Unstructured: 16.13%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF06378	DUF1071	43.31
PF04545	Sigma70_r4	18.90
PF09588	YqaJ	9.45
PF14090	HTH_39	1.57
PF08291	Peptidase_M15_3	0.79
PF15943	YdaS_antitoxin	0.79
PF13884	Peptidase_S74	0.79
PF13392	HNH_3	0.79
PF09374	PG_binding_3	0.79
PF07120	DUF1376	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.28 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.15 %
Unclassified	root	N/A	4.72 %
Viruses	superkingdom	All Organisms → Viruses	92.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.15 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	86.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	86.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.15 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Unclassified	root	N/A	4.72 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	86.61 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	86.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.79 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	84.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.79 %
Unclassified	root	N/A	4.72 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.79 %
Unclassified	root	N/A	4.72 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	84.25 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Pseudomonas putida group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group	0.79 %
Unclassified	root	N/A	4.72 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	84.25 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.51 %
Pseudomonas monteilii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas monteilii	0.79 %
Unclassified	root	N/A	4.72 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	84.25 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000882\|FwDRAFT_10039070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1227	Open in IMG/M
3300002930\|Water_100222	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13067	Open in IMG/M
3300002930\|Water_101597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4165	Open in IMG/M
3300006805\|Ga0075464_10078921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1866	Open in IMG/M
3300007708\|Ga0102859_1162075	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300009056\|Ga0102860_1180952	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	601	Open in IMG/M
3300009068\|Ga0114973_10501629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	628	Open in IMG/M
3300009151\|Ga0114962_10165524	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300009151\|Ga0114962_10213054	All Organisms → Viruses → Predicted Viral	1121	Open in IMG/M
3300009155\|Ga0114968_10084149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1972	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.64%
Terrestrial	Environmental → Terrestrial	2.36%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.36%
Freshwater	Environmental → Aquatic → Freshwater	92.13%
Marine	Environmental → Aquatic → Marine	5.51%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	1.57%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.15%
Lake	Environmental → Aquatic → Freshwater → Lake	59.06%
Lentic	Environmental → Aquatic → Freshwater → Lentic	30.71%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.57%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.15%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.02%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	48.03%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	30.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.36%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.57%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.79%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.57%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	2.36%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.57%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.79%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	1.57%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.94%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.36%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.79%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	39.37%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	30.71%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.02%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FwDRAFT_100390703	3300000882	Freshwater And Marine	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK*
Water_10022221	3300002930	Estuary Water	MTISEQIDSLLSKQKEVDYILVTETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTQK*
Water_10159712	3300002930	Estuary Water	MTINDQIESLLSKQKEIDYILVTETIKEYLVTWPKNVDSQLWNHRLESLLRKIDEKFERTQK*
Ga0075464_100789215	3300006805	Aqueous	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0102859_11620751	3300007708	Estuarine	MTFNEQIESLLSKQKEVDYLLATETIKEYLVTWPQNADSKLWNHRVESLLKRIDEKFERTQK*
Ga0102860_11809522	3300009056	Estuarine	MTFNEQIESLLSKQKEIDYIVATETIKEYLVTWPQNVDSKLWNHRVESLLKRIDEKFERTQK*
Ga0114973_105016291	3300009068	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFSRTTNE*
Ga0114962_101655242	3300009151	Freshwater Lake	MTINEQIESLLSKQKEIDYILATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK*
Ga0114962_102130542	3300009151	Freshwater Lake	MTFNEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK*
Ga0114968_100841492	3300009155	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLVITTLVKEYLVTWPQNADSKLWNHRVESLLKRIDEKFERTPS*
Ga0114977_100429024	3300009158	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQA*
Ga0114977_102903132	3300009158	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA*
Ga0114978_100193211	3300009159	Freshwater Lake	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0114978_101990611	3300009159	Freshwater Lake	IDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQA*
Ga0114978_103552111	3300009159	Freshwater Lake	MTFNEQIETLLSKQKEIDYILATETIKEYLVTWPQNADSKLWNHRLESLLKRLDEKFERTQK*
Ga0114978_107462981	3300009159	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0114966_104293532	3300009161	Freshwater Lake	MTINEQIESLLSKQKEIDYILVTETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0114966_104371111	3300009161	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK*
Ga0114970_100126856	3300009163	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPENADSKLWNHRLESLLRKIDEKFERTQK*
Ga0114975_1002513310	3300009164	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKKIDEKFGKGDNS*
Ga0114975_101366023	3300009164	Freshwater Lake	MTFNEQIDSLLNKQKEIDYLLATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA*
Ga0114975_102001343	3300009164	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA*
Ga0114975_102512784	3300009164	Freshwater Lake	LLNKQKEVDYLLATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA*
Ga0114975_106978603	3300009164	Freshwater Lake	MTISEQIESLLSKQKEIDYILVTETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0114979_101834472	3300009180	Freshwater Lake	MTISEQIESLLSKQKEIDYILATEVIKEYLVTWPENVDSKLWNNRLESLLKKIDEKFERTTN*
Ga0114969_101536375	3300009181	Freshwater Lake	MTISEQIDSLLSKQKKVDYLVITTLVKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK*
Ga0114959_102316823	3300009182	Freshwater Lake	MTISEQIESLLSKQKEIDYILVTETIKEYLVTWPENADSKLWNHRLESLLRKIDEKFERTQK*
Ga0114959_103001365	3300009182	Freshwater Lake	EQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0114974_102643811	3300009183	Freshwater Lake	ISEQIESLLSKQKEIDYIVATETIKEYLVTWPENVDSKLWNHRLKSLLRKIDEKFERTQK
Ga0114974_107691911	3300009183	Freshwater Lake	MTINEQIESLLSKQKEIDYILATETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK*
Ga0114971_105700013	3300009185	Freshwater Lake	MSINEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDE
Ga0114967_104532242	3300010160	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQK*
Ga0114967_104639463	3300010160	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK*
Ga0151620_11466982	3300011268	Freshwater	MTINEQIESLLSKQKEVDYLVITTLVKEYLVTWPENVDSKLWNHRVESLLKRIDEKFERTQK*
Ga0153801_10284433	3300012017	Freshwater	MTFNEQIDSLLNKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTPA*
Ga0157498_10327872	3300012666	Freshwater, Surface Ice	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNNRLESLLKRLDEKFERTQK*
Ga0164295_102293453	3300013014	Freshwater	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPSNVDSKLWNHRVESLLKRIDEKFERTQK*
Ga0119960_10753182	3300014811	Aquatic	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPENADSKLWNHRLESLLRKIDEKFERT
Ga0181338_10182692	3300015050	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTPA*
Ga0181364_10131915	3300017701	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILVTETIKEYLVTWPENVDSKLWNHRLESLLKKIDEKFSRTTN
Ga0181350_10309401	3300017716	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILATETIKEYLVTWPSNADSKLWNHRLESLLKRIDEKFGKGDNS
Ga0181350_10583771	3300017716	Freshwater Lake	GVDMTFNEQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQK
Ga0181350_11263822	3300017716	Freshwater Lake	MTFNQQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA
Ga0181347_10980962	3300017722	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLVITTLVKEYLVTWPQNADSKLWNHRVESLQKRIDEKFGKGDNS
Ga0181347_11193442	3300017722	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILVTETIKEYLVTWPSNVDSKLWNHRLESLLKKIDEKFERTTNQ
Ga0181347_11776123	3300017722	Freshwater Lake	MTISEQIDSLLSKQKEVDYILVTETIKEYLVTWPQNVDSKLWNNRLESLLKKIDEKFERTTN
Ga0181347_11835641	3300017722	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPANVDSKLWNHRLESLLKRIDEKFERT
Ga0181347_12131583	3300017722	Freshwater Lake	MTISEQIDSLLSKQKEVDYILVTETIKEYLVTWPENVDSKLWNHRLESLLKKIDEKFSRTTN
Ga0181362_10767502	3300017723	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILVTETIKEYLVTWPQNADSKLWNNRLESLLKKIDEKFSRTTN
Ga0181352_11637151	3300017747	Freshwater Lake	ISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK
Ga0181344_10152515	3300017754	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTPA
Ga0181344_10429954	3300017754	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPKNVDSQLWNHRLESLLRKIDEKFERTQK
Ga0181344_12406711	3300017754	Freshwater Lake	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKF
Ga0181356_11008722	3300017761	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQA
Ga0181356_11066033	3300017761	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNADSKLWNHRLESLLKRIDEKFGKGDNS
Ga0181343_11983641	3300017766	Freshwater Lake	MTISEQIESLLSKQKEIDYILATETIKEYLVIWPENVDSKLWNHRLESLLRKIDEKFERTQK
Ga0181358_11209713	3300017774	Freshwater Lake	MTFNEQIDSLLSNQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKRIDEKFGKG
Ga0181357_10464925	3300017777	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSKLWNHRVESLLKRIDEKFGKGDNS
Ga0181357_10632322	3300017777	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0181357_11616031	3300017777	Freshwater Lake	IDSLLNKQKEVDYLLATETIKEYLVTWPANVDSKLWNHRLESLLKRIDEKFERTPA
Ga0181357_12718491	3300017777	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLTTETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQA
Ga0181357_13261421	3300017777	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILVTETIKEYLVTWPQNADSKLWNNRLESLLKKI
Ga0181349_10292911	3300017778	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPANVDSKLWNHRLESLLKKIDEKFERTTN
Ga0181349_10713213	3300017778	Freshwater Lake	MTISEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0181346_11305372	3300017780	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVIWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0181355_11055433	3300017785	Freshwater Lake	MTFNEQIESLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFSRTTN
Ga0181359_100920711	3300019784	Freshwater Lake	MTFNEQIESLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0181359_10496305	3300019784	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILVTETIKEYLVTWPSNVDSKLWNHRLESLLKKIDEKFSRTTN
Ga0181359_11436083	3300019784	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILVTETIKEYLVTWPQNVDSKLWNNRLESLLKKIDEKFERTTNQ
Ga0181359_11516132	3300019784	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILVTETIKEYLVTWPENVDSKLWNHRLESLLKKIDEKFSRTTN
Ga0211731_1008824417	3300020205	Freshwater	MTFNEQIDSLLNKQKEVDYILVTETIKEYLVTWPSNVDSQLWNHRLESLLKRIDEKFGKGDNS
Ga0211731_116059214	3300020205	Freshwater	MTISEQIESLLSKQKEIDYILVTETIKEYLVTWPKNVDSQLWNHRLESLLRKIDEKFERTQK
Ga0194048_100003096	3300021519	Anoxic Zone Freshwater	MTFNEQIDSLLSKQKEVDYLVITTLVKEYIVTWPQNADSKLWNHRVESLLRKIDEKFERTQK
Ga0194048_101405723	3300021519	Anoxic Zone Freshwater	MTINEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK
Ga0222713_104448781	3300021962	Estuarine Water	MTINEQIESLLSKQKEIDYIVATETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK
Ga0181353_10417742	3300022179	Freshwater Lake	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK
Ga0181354_11087153	3300022190	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILVTETIKEYLVTWPSNVDSKLWNHRLESLLKKIDEKFSS
Ga0181354_11780811	3300022190	Freshwater Lake	MTFNEQIDSLLSKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQK
Ga0181351_11117214	3300022407	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQK
Ga0181351_11177092	3300022407	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPANVDSKLWNHRLESLLKRIDEKFERTPA
Ga0181351_11471422	3300022407	Freshwater Lake	MTISEQIESLLSKQKEIDYILVTETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK
Ga0214921_100210246	3300023174	Freshwater	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK
Ga0208916_102230603	3300025896	Aqueous	MTFYEQIESLLSKQKEIDYIVATETIKEYLVTWPKNADSKLWNHRLESLLRKIDEKFERTQK
Ga0209297_10262917	3300027733	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQA
Ga0209297_11089265	3300027733	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK
Ga0209087_100062535	3300027734	Freshwater Lake	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPQNVDSKLWNHRLESLLKKIDEKFERTTN
Ga0209087_10592756	3300027734	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKKIDEKFGKGDNS
Ga0209087_12634503	3300027734	Freshwater Lake	MTFNEQIDSLLNKQKEVDYILATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA
Ga0209190_10522664	3300027736	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPENADSKLWNHRLESLLRKIDEKFERTQK
Ga0209597_10164203	3300027746	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK
Ga0209084_10412966	3300027749	Freshwater Lake	MTFNEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK
Ga0209596_10391735	3300027754	Freshwater Lake	MTISEQIDSLLSKQKKVDYLVITTLVKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK
Ga0209596_11737015	3300027754	Freshwater Lake	EMTISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQK
Ga0209596_13380353	3300027754	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLVITTLVKEYLVTWPQNADSKLWNHRVESLLKRIDEKFERTPS
Ga0209296_100401717	3300027759	Freshwater Lake	MTINEQIDSLLSKQKEIDYILATETIKEYLVTWPSNVDSKLWNHRLESLLRKIDEKFERTQK
Ga0209296_12103842	3300027759	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSKLWNHRLESLLKRLDEKFERTPA
Ga0209088_104107121	3300027763	Freshwater Lake	MTISEQIESLLSKQKEIDYILVTETIKEYLVTWPQNVDSKLWNHRLESLLRKIDEKFERTQK
Ga0209086_102134761	3300027770	Freshwater Lake	MTINEQIESLLSKQKEIDYILVTETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK
Ga0209086_103729871	3300027770	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNHRVESLLKRIDEKFSRTTN
Ga0209500_100645396	3300027782	Freshwater Lake	GRTCMTISEQIESLLSKQKEIDYILATETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK
Ga0209500_102244861	3300027782	Freshwater Lake	MTINEQIDSLLSKQKEIDYIVATETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKF
Ga0209353_101212805	3300027798	Freshwater Lake	MTFNEQIDSLLSKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTPA
Ga0209400_10279962	3300027963	Freshwater Lake	MTFNEQIDSLLNKQKEVDYLLATETIKEYLVTWPSNVDSQLWNHRLESLLKRLDEKFERTQK
Ga0209400_12840391	3300027963	Freshwater Lake	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPQNADSKLWNHRLESLLKRLDEKFERTQK
Ga0209191_10360382	3300027969	Freshwater Lake	MTISEQIESLLSKQKEIDYILVTETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK
Ga0247723_100329818	3300028025	Deep Subsurface Sediment	MTISEQIESLLSKQKEIDYILVTETIKMYLVTFPQNADSQLWNHRLESLLKKIDEKFERTTN
Ga0247723_10154155	3300028025	Deep Subsurface Sediment	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPENADSKLWNHRLESLLRKIDEKFERTQK
Ga0247723_10415494	3300028025	Deep Subsurface Sediment	MTISEQIESLLSKQKEIDYILATETIKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0304730_10941121	3300028394	Freshwater Lake	SKQKEIDYILVTETIKEYLVTWPENVDSKLWNHRLESLLRKIDEKFERTQK
Ga0304730_10965354	3300028394	Freshwater Lake	MTISEQIESLLSKQKEIDYIVATETIKEYLVTWPQNADSKLWNHRLESLLRKIDEKFERTQKX
Ga0315291_110487282	3300031707	Sediment	MTINEQIDSLLSKQKEIDYILVTETIKEYLVTWPSNVDSQLWNNRLESLLKKIDEKFERTTN
Ga0315293_102649164	3300031746	Sediment	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0315293_106838451	3300031746	Sediment	VTINEQIESLLSKQKEIDYIVATETIKEYLVTWPSNVDSKLWNNRLESLLKKID
Ga0315297_113059832	3300031873	Sediment	MTINEQIDSLLSKQKEIDYILVTETIKEYLVTWPSNVDSQLWNNRLESLLKKIDEKFERTTNQ
Ga0315294_104977874	3300031952	Sediment	MTFNEQIESLLSKQKEIDYIVATETIKEYLVTWPSNVDSKLWNHRVESLLKRIDEKFERTQK
Ga0315294_109414283	3300031952	Sediment	VTINEQIESLLSKQKEIDYIVATETIKEYLVTWPSNVDSKLWNNRLESLLKKIDEKFERTTNQ
Ga0315274_109456213	3300031999	Sediment	VTINEQIESLLSKQKEIDYIVATETIKEYLVTWPSNVDSKLWNHRVESLLKRIDEKFERTQK
Ga0315289_104978081	3300032046	Sediment	VTINEQIESLLSKQKEIDYIVATETIKEYLVTWPSNVDSKLWNHRVESLLKRIDEKFER
Ga0315289_106335243	3300032046	Sediment	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTNE
Ga0315284_111105984	3300032053	Sediment	MTFNEQIETLLSKQKEIDYIVATETIKEYLVTWPSNVNSKLWNHRVESLLKKIDEKFERTQK
Ga0315277_101809913	3300032118	Sediment	MTINEQIDSLLSKQKEIDYILVTETIKEYLVTWPSNVDSQLWNNRLESLLKKIDEKFERTTNE
Ga0315295_115134871	3300032156	Sediment	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTNQ
Ga0315268_122164582	3300032173	Sediment	MTFNEQIDSLLSKQKEVDYILATETIKEYLVTWPSNVDSQLWNHRLESLLKRMDEKFGKGDNS
Ga0315286_120552012	3300032342	Sediment	MTISEQIETLLSKQKEIDYIVATETIKEYLVTWPSNVDSKLWNHRVESLLKRIDEKFERTQK
Ga0334987_0548382_1_171	3300034061	Freshwater	IDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFERTTN
Ga0335012_0440671_408_596	3300034093	Freshwater	MTFNEQIDSLLNKQKEVDYIVVTETIKEYLVTWPQNADSKLWNHRLESLLKRLDEKFERTQK
Ga0335033_0312233_321_512	3300034117	Freshwater	MTFNEQIDSLLSKQKEVDYLVITTLVKEYLVTWPQNADSKLWNNRLESLLKKIDEKFSRTTNE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065535

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences